LOCUS       DAXHRP010000001        49788 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.001, whole genome shotgun sequence.
ACCESSION   DAXHRP010000001 DAXHRP010000000
VERSION     DAXHRP010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 49788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49788
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.001"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            104..1915
                     /gene="typA"
                     /locus_tag="ACFM72_000001"
     CDS             104..1915
                     /gene="typA"
                     /locus_tag="ACFM72_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HFC6256655.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(2479..2569)
                     /locus_tag="ACFM72_000002"
     tRNA            complement(2479..2569)
                     /locus_tag="ACFM72_000002"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2533..2535),aa:Ser,seq:gga)
     gene            complement(2608..2694)
                     /locus_tag="ACFM72_000003"
     tRNA            complement(2608..2694)
                     /locus_tag="ACFM72_000003"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2658..2660),aa:Leu,seq:cag)
     gene            complement(2730..2816)
                     /locus_tag="ACFM72_000004"
     tRNA            complement(2730..2816)
                     /locus_tag="ACFM72_000004"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2780..2782),aa:Leu,seq:cag)
     gene            2905..5289
                     /gene="rnr"
                     /locus_tag="ACFM72_000005"
     CDS             2905..5289
                     /gene="rnr"
                     /locus_tag="ACFM72_000005"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HFC6256656.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAIKVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAGKKTARGGKVRGRGASAAAESGKKAKKPIPIEVQKVKKRKGKS"
     gene            complement(5633..7096)
                     /gene="guaB"
                     /locus_tag="ACFM72_000006"
     CDS             complement(5633..7096)
                     /gene="guaB"
                     /locus_tag="ACFM72_000006"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HFC6256657.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(7236..9794)
                     /gene="glnD"
                     /locus_tag="ACFM72_000007"
     CDS             complement(7236..9794)
                     /gene="glnD"
                     /locus_tag="ACFM72_000007"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HFC6256658.1"
                     /translation="MPANLSSALETFKRQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWVEHFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGGIGELCESVRDDITGDTAFLEARFLFGNRQTADELAKKMNAQRNVPA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSTVAQKEDIQDPSVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSLDLKNPKIQSSLKQTLLEQLS"
     gene            complement(9842..10162)
                     /locus_tag="ACFM72_000008"
     CDS             complement(9842..10162)
                     /locus_tag="ACFM72_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6256659.1"
                     /translation="MMGNKLTPPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPS
                     ESGI"
     gene            complement(10487..10960)
                     /gene="bfr"
                     /locus_tag="ACFM72_000009"
     CDS             complement(10487..10960)
                     /gene="bfr"
                     /locus_tag="ACFM72_000009"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC6256660.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLEKEKEKHEALI
                     AAISVAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(10988..11452)
                     /gene="bfr"
                     /locus_tag="ACFM72_000010"
     CDS             complement(10988..11452)
                     /gene="bfr"
                     /locus_tag="ACFM72_000010"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC6256661.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVSRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            12028..12495
                     /locus_tag="ACFM72_000011"
     CDS             12028..12495
                     /locus_tag="ACFM72_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HFC6256662.1"
                     /translation="MKIENIDIISPELFPQETFNETEAFGALVWLWAVSPIYQHAGVQ
                     EAAVNILPVLKNGQFALFSSNGHPVAYCTWAYFDEETEWQYLQSNDVLRHSENWCSGN
                     RMWLINWFAPFGDSRMMKRILVHLFPKREIRWLYHRGSEKGKRIMRFPALSKQ"
     gene            complement(12536..12892)
                     /locus_tag="ACFM72_000012"
     CDS             complement(12536..12892)
                     /locus_tag="ACFM72_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256663.1"
                     /translation="MKYIVSISLAMGLAACSFGGFKPPPDDSVYWKYSRIEQEYPAMM
                     SKNINLRIYSYEEYSKQIDDLFAKEKKDWKECGYDPIGGGGGSKADACMRKRGWYRVG
                     DDIYPENKKYEWPREN"
     gene            complement(12889..13227)
                     /locus_tag="ACFM72_000013"
     CDS             complement(12889..13227)
                     /locus_tag="ACFM72_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256664.1"
                     /translation="MKYIVSISLAMGLAACSFGGFKPNPWDAASFWELKNYANPYPGS
                     ASAALDQYPSKARRRQLKDMQECGYDPIDGGKSEADACLRKKGWCRKGFDPYPENKKY
                     EWPREEGKTK"
     gene            complement(13224..13586)
                     /locus_tag="ACFM72_000014"
     CDS             complement(13224..13586)
                     /locus_tag="ACFM72_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC6256665.1"
                     /translation="MKYIVSISLAMGLAACSFGGFKPPPDDSAFWRLTNYAKLYPGLT
                     SATLDQYPPEERRRQLHDSFAREKKDWKECGYDPIGGGGGSEADACMRKRGWYRVGND
                     IYPENKKYEWPREEGKTK"
     gene            complement(13583..20404)
                     /locus_tag="ACFM72_000015"
     CDS             complement(13583..20404)
                     /locus_tag="ACFM72_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HFC6256666.1"
                     /translation="MNKRCYKVIFNKKRSCMMAVAENVHRDGKSMQDSEAASVRVTGA
                     ASVSSARAAFGFRMAAFSVMLALGVAAFSPAPASGIIADKSAPKNQQAVILQTANGLP
                     QVNIQTPSSQGVSVNRFKQFDVDEKGVILNNSRSNTQTQLGGWIQGNPHLARGEARVI
                     VNQIDSSNPSLLNGYIEVGGKRAEVVVANPSGIRVNGGGLINAASVTLTSGVPVLNNG
                     NLTGFDVSSGKVVIGGKGLDTSDADYTRILSRAAEINAGVWGKDVKVVSGKNKLDFDG
                     SLAKTASAPSSSDSVTPTVAIDTATLGGMYADKITLISTDNGAVIRNKGRIFAATGGV
                     TLSADGKLSNSGSIDAAEITISAQTVDNRQGFIRSGKGSVLKVSDGINNQAGLIGSAG
                     LLDIRDTGKSSLHINNTDGTIIAGKDVSLQAKSLDNDGILTAARDVSVSLHDDFAGKR
                     DIEAGRTLTFSTQGRLKNTRIIQAGDTVSLTAAQIDNTVSGKIQSGNRTGLNGKNGIT
                     NRGLINSNGITLLQTEAKSDNAGTGRIYGSRVAVEADTLLNREETVNGETKAAVIAAR
                     ERLDIGAREIENREAALLSSSGDLHIGSALNGSRQVQGANTSLHNRSAAIESSGNIRI
                     ATKDLQNTNEHLRFHTEETHREHRIEYQAEGRTERYPEGSQKELGWEIFEDESLHMRT
                     PDGSPHSVWYKYDYERITAESKITESKPGQIISGGNLVLDAAKLKNHNSRIIAGGRLI
                     VGTPESALDNDETLGTKTITDKGDLHRYHRHHKKGRDSTGYSRSPYEPAPEVSSIRMG
                     ISAYKGYAPQQASDIPGTVVPVVAENGIHPTFTLPNSSLFAIAPNNKGYLIETDPAFT
                     DYRKWLGSGYMLAALQQDPNHIHKRLGDGYYEQKLVNEQIAKLTGYRRLDGYTNDEEQ
                     FKALMDNGITIAKELQLTPGIALSAEQVARLTSDIVWLENETVTLPDGTTQTVLKPKV
                     YVRARPKDMNGQGALLSGSVVDIGSGAIENRGGLIAGREALILNAQNIKNLQGDLQGK
                     NIFAAAGSDITNTGSIGAENALLLKASNNIESRSETRSNQNEQGSVRNIGRVAGIYLT
                     GRQNGSVLLDAGNNIVLTASELTNQSEDGQTVLNAGGDIRSDTTGISRNQNTIFDSDN
                     YVIRKEQNEVGSTIRTRGNLSLNAKGDIRIRAAEVGSEQGRLKLAAGRDIKVEAGKAH
                     TETEDALKYTGRSGGGIKQKMTRHLKNQNGQAVSGTLDGKEIILVSGRDITVTGSNII
                     ADNHTILSAKNNIVLKAAETRSRSAEMNKKEKSGLMGSGGIGFTAGSKKDTQTNRSET
                     VSHTESVVGSLNGNTLISAGKHYTQTGSTISSPQGDVGISSGKISIDAAQNRYSQESK
                     QVYEQKGVTVAISVPVVNTVMGAVDAVKAVQTVGKSKNSRVNAMAAANALNKGVDSGV
                     ALYNAARNPKKAAGQGISVSVTYGEQKNTSESRIKGTQVQEGKITGGGKVSLTASGAG
                     KDSRITITGSDVYGGKGTRLKAENAVQIEAARQTHQERSENKSAGFNAGVAIAINKGI
                     SFGFTAGANYGKGYGNGDETAYRNSHIGSKDSQTAIESGGDTVIKGGQLKGKGVGVTA
                     ESLHIESLQDTAVFKGKQENVSAQVTVGYGFSVGGSYNRSKSSSDYASVNEQSGIFAG
                     GDGYRIRVNGKTGLVGAAVVSDADKSKNLLKTSEIWHKDIQNHASAAASALGLSGGFS
                     YSPKPTSGQYSTKKEAEIGKIGGKPVSLMRFDQVSAKDDELNEKYRSERIEKGETFKE
                     ANLNQNNAGGLKFGLKQNDIHSNDKYALAKMGLGNLLGNAKESESRQSITRSVISEGD
                     WQIASAQGRKNIAGIEKGTSSAHKALAKADREGLLKEVELNRDVAKEFINETLIGGIA
                     DEAYRSQFIAEHRLMTFKMDENGEPIEDKQLEEDINKQFDNSVKLKKEFASFKDYWEA
                     YKAIGGNIYELREVSDQERKNLKTARYTDPETGKTVEKIVVGVNGIFNNIQAAAKFAA
                     QQYVGRFNPEKNRYERTYENVYFLHNPETNGRGFSKLPEIAVAAFHKMLEGAKIGNKT
                     VIGLSNSGLALGNIMEDYGKDKNGLFVGSHSRGTLVVDNVLNTLNTQANRDKKILSNT
                     ELKMVGPAANVVRADKRLFQLQQGVTTPRTADFARQSIQIENHELDLIGMLIGRNPAT
                     VGTNTRQKSQWQAIRDIIGDYTSPHNCYGMANKQCVTDGHRDPENKQTQSPTGVFERG
                     VSNEIEIMYRPVRIYDLQHPKGKTK"
     gene            complement(20914..21897)
                     /gene="lipA"
                     /locus_tag="ACFM72_000016"
     CDS             complement(20914..21897)
                     /gene="lipA"
                     /locus_tag="ACFM72_000016"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HFC6256667.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPRNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(21890..22513)
                     /gene="lipB"
                     /locus_tag="ACFM72_000017"
     CDS             complement(21890..22513)
                     /gene="lipB"
                     /locus_tag="ACFM72_000017"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HFC6256668.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(22515..22790)
                     /locus_tag="ACFM72_000018"
     CDS             complement(22515..22790)
                     /locus_tag="ACFM72_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HFC6256669.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            22975..24045
                     /locus_tag="ACFM72_000019"
     CDS             22975..24045
                     /locus_tag="ACFM72_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HFC6256670.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(24151..24982)
                     /locus_tag="ACFM72_000020"
                     /pseudo
     CDS             complement(24151..24982)
                     /locus_tag="ACFM72_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
     gene            complement(24997..25404)
                     /locus_tag="ACFM72_000021"
     CDS             complement(24997..25404)
                     /locus_tag="ACFM72_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HFC6256671.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIANP"
     gene            25485..26144
                     /gene="ung"
                     /locus_tag="ACFM72_000022"
     CDS             25485..26144
                     /gene="ung"
                     /locus_tag="ACFM72_000022"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HFC6256672.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGVRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            26221..26349
                     /locus_tag="ACFM72_000023"
     CDS             26221..26349
                     /locus_tag="ACFM72_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HFC6256673.1"
                     /translation="MAIKKNQLYASLWAGCDELRGGMDASLYKELCAYAIVFKICF"
     gene            26291..26893
                     /locus_tag="ACFM72_000024"
     CDS             26291..26893
                     /locus_tag="ACFM72_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HFC6256674.1"
                     /translation="MRAFIKNYVLTLLFLKYVSDKHKYGGGMIELHAGTTFDDIVKLK
                     NTADIGDRLNKIIAQIAEANDLKGVIDVTDFNDEDKLGKGKEMIDRLSRLVGIFKKLN
                     LSSNQAEDDDLLGDAYEYLMRHFATESGKSKGQFYTPAEVSRIMAKIIGISADCRPAP
                     AFMTRPAARVRCCSKPPPKPAAKSAFTVRKKMWQPRPLPV"
     gene            26806..27439
                     /locus_tag="ACFM72_000025"
                     /pseudo
     CDS             26806..27439
                     /locus_tag="ACFM72_000025"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
     gene            27641..27757
                     /locus_tag="ACFM72_000026"
                     /pseudo
     CDS             27641..27757
                     /locus_tag="ACFM72_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            27827..28771
                     /locus_tag="ACFM72_000027"
     CDS             27827..28771
                     /locus_tag="ACFM72_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC6256675.1"
                     /translation="MAHPDYAAFKAGHLAKFAAWHTQNDLAAIQPGRLIRKWSESLLD
                     AFKPGSLIEEYDFYQILTDYWAETLQDDVYLIAQDGWKAVKNLAEITKESDEDANLTV
                     VFEETETGKKGKAKTKRISKKYRSEVIAPELVARRYFSDGIAKLEEKQSELERLSQEL
                     ENHIEEHGGEEGALNDVLDAKGKLSAKLLKTALEESGIEEGERAVLQTTQTLMTQEKA
                     AKDAVKTQIEALNLAVFKQFGRLSEAEIKQLAVQDKWLADLQSRIENRLENSIQQLIS
                     RLNTLEDRYRSPMAELAREVEKWQSKVNAHLENMGFGG"
     gene            28951..29046
                     /locus_tag="ACFM72_000028"
     CDS             28951..29046
                     /locus_tag="ACFM72_000028"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256676.1"
                     /translation="MAHMDNFLPNWQSIKQQLNALELFAQIYNLT"
     gene            complement(29336..29851)
                     /locus_tag="ACFM72_000029"
     CDS             complement(29336..29851)
                     /locus_tag="ACFM72_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256677.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(29917..30354)
                     /locus_tag="ACFM72_000030"
     CDS             complement(29917..30354)
                     /locus_tag="ACFM72_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC6256678.1"
                     /translation="MKLKSRNSLPSDKEARAGCLSLPANNGIIRALSPPFTGINIRLF
                     AALGLLSLSGAAAQASVYHCNSNGKSVYTSAPAGSCADADLPKISSHQGGGYRLKIKK
                     LSQEAKIHIESKKKNKKPAGKKNRQAAKAPKENQKQPTEKKSP"
     gene            complement(30317..32239)
                     /locus_tag="ACFM72_000031"
     CDS             complement(30317..32239)
                     /locus_tag="ACFM72_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC6256679.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGKITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPKVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(32316..32687)
                     /locus_tag="ACFM72_000032"
     CDS             complement(32316..32687)
                     /locus_tag="ACFM72_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HFC6256680.1"
                     /translation="MLFEENPIDEHFAEYDRRTGEIRLSGRHFNKPVLLHRDSAGLSK
                     WQSLSELTPDNLLSDVKADDYPEILIIGTGAAQEFIHPKIMADFSRIGIGVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            32885..34192
                     /locus_tag="ACFM72_000033"
     CDS             32885..34192
                     /locus_tag="ACFM72_000033"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HFC6256681.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDIVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            34185..34619
                     /locus_tag="ACFM72_000034"
     CDS             34185..34619
                     /locus_tag="ACFM72_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256682.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(34678..34947)
                     /locus_tag="ACFM72_000035"
     CDS             complement(34678..34947)
                     /locus_tag="ACFM72_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HFC6256683.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(35129..37579)
                     /gene="lon"
                     /locus_tag="ACFM72_000036"
     CDS             complement(35129..37579)
                     /gene="lon"
                     /locus_tag="ACFM72_000036"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HFC6256684.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIETVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHIHVP
                     EGATPKDGPSAGIAMTLAAVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEPSGAE
                     AAAESASKPKPRSRATKH"
     gene            37679..37855
                     /locus_tag="ACFM72_000037"
     CDS             37679..37855
                     /locus_tag="ACFM72_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase"
                     /protein_id="HFC6256685.1"
                     /translation="MPSETFRLQTAWAWKDKAGTKNCSVLPLLAVPSVWFAVLPPYFQ
                     NMTQVFHVFFYFSR"
     gene            37830..38933
                     /locus_tag="ACFM72_000038"
     CDS             37830..38933
                     /locus_tag="ACFM72_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC6256686.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWHYVRESGANGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRSALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            complement(38961..40706)
                     /gene="recD"
                     /locus_tag="ACFM72_000039"
     CDS             complement(38961..40706)
                     /gene="recD"
                     /locus_tag="ACFM72_000039"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HFC6256687.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGDEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQG"
     gene            complement(40774..41469)
                     /gene="lolD"
                     /locus_tag="ACFM72_000040"
     CDS             complement(40774..41469)
                     /gene="lolD"
                     /locus_tag="ACFM72_000040"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HFC6256688.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIHAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSAHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(41462..42709)
                     /locus_tag="ACFM72_000041"
     CDS             complement(41462..42709)
                     /locus_tag="ACFM72_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HFC6256689.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            42914..43192
                     /locus_tag="ACFM72_000042"
     CDS             42914..43192
                     /locus_tag="ACFM72_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256690.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(43248..43865)
                     /gene="recR"
                     /locus_tag="ACFM72_000043"
     CDS             complement(43248..43865)
                     /gene="recR"
                     /locus_tag="ACFM72_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HFC6256691.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(43932..45470)
                     /locus_tag="ACFM72_000044"
     CDS             complement(43932..45470)
                     /locus_tag="ACFM72_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HFC6256692.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISEQSLNAAVQNEQADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(45550..45903)
                     /locus_tag="ACFM72_000045"
     CDS             complement(45550..45903)
                     /locus_tag="ACFM72_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HFC6256693.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEISL
                     WLEQVPLEILLNKRGTTWRKLNALMQEEALSSKEGAVRIMSEMPSLIKRPVLEYGGKV
                     HVGFSDESYREIFKR"
     gene            46053..47681
                     /locus_tag="ACFM72_000046"
     CDS             46053..47681
                     /locus_tag="ACFM72_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HFC6256694.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQDGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            47753..49006
                     /locus_tag="ACFM72_000047"
     CDS             47753..49006
                     /locus_tag="ACFM72_000047"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HFC6256695.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWFALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
     gene            49091..49768
                     /locus_tag="ACFM72_000048"
     CDS             49091..49768
                     /locus_tag="ACFM72_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HFC6256696.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT        11200 a        12748 c        13209 g        12631 t
ORIGIN      
        1 gaaaggcaag ggcttcagac ggcatcttca tttcccaaat actgtccggt aaagcgtggt
       61 ataatgcgta gttatctctt acagtttttg aaaaacatta attatgaaac aaatccgcaa
      121 catcgccatc atcgcccacg tcgaccacgg caaaaccaca ttggtcgacc aactgctgcg
      181 ccaatccggc acattccgcg ccaaccagca ggttgacgag cgcgtgatgg acagcaacga
      241 cctcgaaaaa gaacgcggca tcaccatcct cgccaaaaac accgccatcg attacgaagg
      301 ctaccacatc aatatcgtcg atacgccggg acacgccgac ttcggcggcg aagtagagcg
      361 cgttttgggg atggtggact gcgtcgtctt gttggtggac gcgcaggaag gcccgatgcc
      421 gcaaacccgt ttcgtgacca aaaaagcctt ggctttgggg ctgaaaccga ttgtcgtcat
      481 caacaaaatc gacaagccgt ccgctcgtcc gagctgggtt atcgaccaaa ctttcgagct
      541 gttcgacaac ttgggcgcga ccgacgagca gttggatttc ccgattgttt acgcttcagg
      601 gttgagcggt ttcgccaaat tggaagaaac cgacgagagc aacgacatgc gtccgctgtt
      661 cgatactatc ttaaaatata cgcctgcacc gagcggcagc gcggacgaaa cgctgcaact
      721 gcaaatttcc caactcgact acgacaacta caccggccgc ctcggtatcg gtcgtatctt
      781 gaacggacgc atcaaacccg gccaaaccgt tgccgtcatg aaccacgatc agcaaatcgc
      841 ccaaggccgc atcaaccagc ttttgggttt caaaggtttg gaacgcgtgc cgcttgaaga
      901 agccgaagcc ggcgacatcg tgattatttc cggtatcgaa gacatcggca tcggcgtaac
      961 catcaccgac aaagacaacc ccaaaggcct gccgatgttg agcgtggacg aaccgacgct
     1021 gaccatggac tttatggtta acaccagccc gttggcgggt acggaaggca aattcgtaac
     1081 cagccgccaa atccgcgacc gcctgcaaaa agaattgctg accaacgtcg ccctgcgcgt
     1141 ggaagacacc gccgatgccg acgtgttccg cgtatccgga cgcggcgaat tgcacctgac
     1201 cattttgttg gaaaatatgc gccgcgaagg ctacgaactc gccgtcggca aaccgcgcgt
     1261 cgtgtaccgc gacatcgacg gtcaaaaatg cgaaccttat gaaaacctga ctgtggacgt
     1321 acctgacgac aaccaaggcg cggtaatgga agaactcggc cgccgccgtg gcgaactgac
     1381 taatatggaa agcgacggca acggacgcac ccgcctcgaa taccatattc cagcgcgcgg
     1441 cttgatcggt ttccaaggcg aattcatgac cttgacgcgc ggtgtcggac tgatgagcca
     1501 cgtgttcgac gattacgcgc ccgtcaaacc cgatatgccc ggccgccaca acggcgtgct
     1561 ggtgtcccaa gagcagggcg aggcggtcgc ttacgccttg tggaatctgg aagaccgcgg
     1621 ccgtatgttc gtatcgccca acgacaaaat ctacgaaggt atgattatcg gcatccacag
     1681 tcgcgacaac gatttggtgg tcaacccgct caaaggcaaa aaacttacca acatccgtgc
     1741 cagcggtacc gacgaagccg ttcgcctgac cacgccgatc aagctgacgc tggaaggtgc
     1801 ggttgagttt atcgacgatg acgaactcgt tgaaatcacg ccgcaatcca tccgtctgcg
     1861 caagcgttac ttgagcgaat tggaacgccg ccgccacttt aaaaagctgg attgatgttt
     1921 actggattaa tgtttaaatg atacgcgatg ccgtctgaaa aatttcagac ggcatttttt
     1981 attcggacgg gctttgcggc ttcttgaagc tgtttcagac ggcgtttttc ctacccaatc
     2041 aagaaactgc cgccattttt ccagcggtat atcgccccgt cgcgtttcgg tatcgggttc
     2101 ggcttcccgg cagcatgtcg aacaatgccg tttgaaggaa tacgcctttt gagtccttac
     2161 aagcttagga agaggatata gtggattaac aaaaatcagg acaaggcgac gaagccgcag
     2221 acagtacaaa tagtacggaa ccgattcact tggtgcctca gcaccttaga gaatcgttct
     2281 ctttgagcta aggcgaggca acgccgtact ggtttttgtt aatccactat aaaatatacc
     2341 gcaaaacata ccataaaaaa acggtaacgg atagttgtaa gcggttgatg acgattatag
     2401 acaataacgg gttttcccaa tgaaattatt gtttgaataa taaaaaatcc taaaccgtaa
     2461 aagtttggga tttgtatttg gcagagagga agggattcga accctcgata cgctattcac
     2521 gtatacacgc tttccaggcg tgcgacttaa accactcatc cacctctcta atggcggaaa
     2581 ttatcccaat cgggataatt tattatttgg tgcccgggag aagactcgaa cttccacacc
     2641 cgtgaggata ccagcacctg aagctggcgc gtctaccaat tccgccaccc gggcaatcta
     2701 aatattgaaa taaagcaaag catttgattt ggtgcccggg agaagactcg aacttccaca
     2761 cccgtgagga tactagcacc tgaagctagc gcgtctacca attccgccac ccgggctttg
     2821 ctttatttgc tgttttgcgg tacagtgtcc tgccgcaaag aagtcgctat tatatagttc
     2881 ataaagagaa tgtcaacagt ccaaatgaat aaaaatatta aatctttaaa tttacgggaa
     2941 aaagacccgt ttttaagtcg tgaaaaacag cgttatgaac atcctttgcc cagtcgggaa
     3001 tggataatcg aattgttgga gcgcaaaggt gtgccttcaa aaatcgaatc gcttgcgcgc
     3061 gagctgtcga ttacggaaga cgagtatgtc ttttttgaac gccgtctgaa ggcgatggcg
     3121 cgggacggtc aggttttaat caaccgtcgg ggcgcggttt gcgcggcgga caaattggat
     3181 ttggtcaaat gccgcgtcga ggcgcataag gacggtttcg gttttgccgt gccgctcacg
     3241 cccgccaaag acggtgattt tgttttgtat gaacgccaga tgcgcggcat tatgcacggc
     3301 gatattgtca ctgttcgtcc tgccggcatg gaccgtaggg gccgccgcga agggacagtt
     3361 ctggatattg tcgaacgcgc gcaaagcaaa gtggtcggcc gtttctatat ggataggggc
     3421 gtggcgattt tggagccgga agacaagcgt ctgaaccaaa gcatcgtatt ggaaccggac
     3481 ggcgtggcgc gtttcaaacc tgaatccggt caggtcatcg tcggcgaaat tgaggtttat
     3541 cctgagcaaa accggccggc agtggcaaaa atcatcgaag ttttgggcga ttatgccgac
     3601 agcggcatgg agattgaaat tgccgtgcgc aagcatcatt tgccgcacca attcagtgaa
     3661 gcgtgtgcca aagccgtgaa aaaaattccc gaccatgtac gcaaaagcga tttgaaaggc
     3721 cgcgtcgatt tgcgcgacct gcctttggta acgattgacg gagaaacggc tcgagatttt
     3781 gacgatgcgg tgtttgccga aaaaatcgga cgcaattacc gtctggtcgt ggcgattgcc
     3841 gatgtcagcc attatgtccg ccccgatgac gctatcgaca cggacgctca ggaacgcagc
     3901 accagtgttt acttcccgcg ccgcgtgatt cccatgttgc cggaaaacct gtccaacggc
     3961 atctgctcgc tcaatcctaa tgtcgagcgt ttgtgtatgg tgtgcgatat ggtcatcact
     4021 tacgcgggca atattaaaga ataccgcttc taccccgccg tgatgcgctc tcatgcccgc
     4081 ctgacctaca accaagtttg gaaatggctt tcaggcggca tcgggcatcc gttcaaagcc
     4141 caaatcgaca cgctttacaa actcttcaaa atccttcaga aaaagcgttt cgaacgcggg
     4201 gcggtggagt ttgacagcat cgaaacccaa atgcttttcg acgacaacgg taaaattgaa
     4261 aaaatcgtcc ccgtcgtccg caacgatgcc cacaagctga ttgaagaatg tatgctggcg
     4321 gcgaatgttt gcgcggcgga ttttctgttg aaaaacaagc atacggcttt gttccgcaac
     4381 catttggggc ccacgcccga aaaactcgcc gccttgcgcg agcagctcgg tctgttgggg
     4441 cttcaacttg gcggcggcga caacccgtcg ccgaaagact atgccgcgct tgccggacag
     4501 ttcaaaggca ggccggatgc cgaattgctg caagtcatga tgttgcgctc catgcaacag
     4561 gcggtttacg aaccgcattg cgacggacac tttggtcttg cctacgaagc atacgcccac
     4621 ttcacctcgc ccatccgccg ctatcccgac ctgaccgtac accgcgccat caaagccgtg
     4681 ttgaatcagc aaacctacac gccaaaaaaa agctggcagg ctttgggcgt gcatacctcg
     4741 ttctgtgagc gccgtgccga cgacgccagc cgcgacgtgg aaaactggct gaaaacctat
     4801 tatatgcgcg ataaggtcgg cgaagtattc gaaggtaaaa tctccggcat gaccagtttt
     4861 ggtatctttg taacactgga cggcatccac attgacggct tggtgcatat cagcgatttg
     4921 ggcgaagact atttcaactt ccgccccgaa atcatggcaa tcgaaggcga acgcagcggc
     4981 atccgtttca acatggggga cagggttgcc attaaagtgg cccgtgccga tttggatgat
     5041 ggaaaaatcg attttgtcct gattgccgag gggagcggca gagggcggaa agttaaatca
     5101 tccgcgtctg ccaaaccggc agggacggcg gggaaaggga agccgaaaac cgccgccggg
     5161 aaaaaaacag cccgaggcgg caaagtaagg ggaaggggcg cgtctgccgc cgcagaatcg
     5221 gggaaaaagg caaagaaacc gattccgatt gaagtacaaa aggtaaaaaa acggaaaggc
     5281 aaatcataat gctgacgggg cggcttgggg agggcagggc agggcatact ttcccgaagc
     5341 cgccgcccga ttttttgata tggcggccgg cgcatcattt caggccaatc gaaacgcccg
     5401 tattgaaaga ttgcgtttat ttccaccgcc gttttaaagg ccggcggtat tcggcagact
     5461 gggcgcaaac ggcgttcaga cggcattttc attctttcgg cgtgtccgtc cgaattgctt
     5521 tgcccgtccg cgcaatcagc ccgtgcggct tgccttgaac ggacaaaaaa tgccgtctga
     5581 aacccgaaaa tcaggtttca gacggcattt tgccttgaaa aggctgttca aatcagcgat
     5641 ggtagttcgg tgcttctttg gtaatttgaa cgtcgtgaac gtgcgattcg ctcatacctg
     5701 cggaagtgat ttccacaaat tctgcttttt cgtgcatttc ggcaatattg gcgcaaccca
     5761 aataccccat gctggagcgc agtccgccgg tcagttggtg gatgatgttc acaatcgggc
     5821 ctttgtaggg aacgcggcct tcgatgcctt cggggacgta tttgtcggtg ctgtcggttt
     5881 tgtcttggaa gtagcggtcg gcagaacctt ggctcatcgc gcccaaggaa cccataccgc
     5941 gataggattt gtacgagcgg ccttggtaga gttcgatttc gcccggcgct tcttccgtgc
     6001 ctgcaaacat accgccgagc atgacgctgt acgcgcctgc ggcgagggct ttggcgatgt
     6061 cgccggagaa gcggatgccg ccgtcggcaa tcagcggaac gcccgtgcct ttgagggctt
     6121 cggcaacgtt gtgaatggcg gtcagttgcg gcacgccgac acctgccacg atacgggtgg
     6181 tgcaaatcga tcccggaccg ataccgactt tgacggcatc cgcgccggcg gcgaccaaat
     6241 ccaaagcggc tttggcagtg gcgatgttgc cgccgatgac ttggatgtgc ggataggttt
     6301 ctttgaccca acgcacgcgg tcgatcacgc cttggctgtg cccgtgggcg gtatcgacga
     6361 caatcacgtc cacgccggcc tcaaccaagg ctttgacgcg ctcttcggtg tcgccgccgg
     6421 tgccgactgc cgcaccgacg cgcagacggc cttcggagtc tttgttggca ttgggaaact
     6481 cggtggtttt taaaatatct ttgacggtaa tcagaccttt gagttcgtct ttttcgttca
     6541 gaaccaaaac gcgctcgact ttgtgcgtgt gcatcagttc gcgcgcttcg tctatgcttg
     6601 tgccttcggg gacggtaacc agacgttcgc gcggggtcat aatggcggaa acgggcaaat
     6661 cgacgcggtt ttcaaaacgc aggtcgcggt tggttacgat gccgacgact ttgccgtttt
     6721 caacgacggg caggccggac attttgcgtt tgcgctgcgc acgcatttcc aagacttcgc
     6781 ggatgagcgt tgtcggtgca acggttacgg ggtctttgac cacgccgctt tcgtggcgtt
     6841 tcactttgga aacggcgcgc gcctgcattt cgggcggcat gtttttatgg atgatgccga
     6901 tgccgccttc ctgtgccatc gaaatggcga ggcgcgcctc ggtaacagtg tccatcgcag
     6961 cggaaagcag ggggaggttg agtgtgattt cgcgggtgag cttggtttga agtttaacgt
     7021 ctcgcggcag cacggtcgaa tgtgcgggaa ccaacaaaac atcgtcgaaa gtataggctt
     7081 tttctacgat acgcataatg ctcggtcttt cagtttgtgc aagatgcacg gcattatagc
     7141 acgttaccgg cggcttgaca gtttatattg tttgcaatat ccccgccttc aggcggcata
     7201 cggcgcggcg gcggaatgcc gtctgaaggc gagcgttatg ataattgttc cagcagcgtc
     7261 tgcttcaatg aggactggat ttttgggttt ttcaggtcta ggctaaaaac ggtaaaactg
     7321 tcttcggcgc gttcatccag tgtggagatt ttggcatagc gcaggctgac gttgtgggcg
     7381 aaaaagactt ccgccatatc ggcgagcagg aaggggcggt tgacggcggt aatttcgacg
     7441 gagtaccagt ccggatagtc ttcttcgggg gtgatggtga tgcttggcgc gatcggcatg
     7501 tagcggctgc ggcggctgat gcggcggcta tggctggaga tttcggcaac ggtgtgtccg
     7561 tggataaagc tgttgagttc ggcttcgagc gcgctttgga tgtcggggta gtcttcggga
     7621 gcgtgctgcg aggggatttg cacgatgaag gtgtcgagga tgtagtcgtg ttcggtaata
     7681 aaggcgcggg cggcgaggat atcgaagccg tggcggctga agatgcggca gaggcgggcg
     7741 aacaggcgcg ggccgttggg catgaaaacc atgacttgaa agctgtcgct tttgggcagg
     7801 atgcggctgc ggacgatggg ggtttcaaag tcgtggacta ggttggcggc gtgccacagg
     7861 atttcgcggg actggtggcg ggcgaagtag gcggaaccga gcgcgttcca tagttttttc
     7921 tgctgttttt cggggacggc ggcgcgggtg agtaagtcgg cggcttcctg ccggcggcgg
     7981 ccgaagaggg tgtgcgggtt gccgccgttg cctgtaaggt agcggccggc ggcatggaag
     8041 aggctttcca gcaggctggc gcgccatgcg ttccacagct tgggattggt accgcgtatg
     8101 tcggaaatgg tcagaaggta gagcgcgctg aggcgttcgt gggtttggac gcgtttgcag
     8161 aaggcatcga gtacgctggg gtcttggatg tcttcttttt gggcgacggt ggacataaga
     8221 agatggtttt caaccagcca ggcgagcagg tcgctttctt cttcggtcag gaagtggtcg
     8281 gcggcaaatt ggcgcgcgtc tgcgatgcct tgtatggcat ggtcgccgcc gcgtcctttg
     8341 gcgatgtcat ggaaaaaggc ggcaaggtag aggatgtctt gtttttcaaa ggactgcatc
     8401 agtgcagagg cgtagggcag ctcgtggctg tgcatatcca aggcaaggcg gcggacgttg
     8461 cggacgacgg tgaggatgtg gtcgtccacg ggatagatgt ggaacaggtc gtgctggagc
     8521 aggccgacga ttttttccca cgcgggcagg tagcgtccca atacgccgta gaggttgagg
     8581 aagcgcaggg tttgggtcag tccgttgccg ttgcggaaaa agccggcgaa gcggtggcgg
     8641 ttttcagaat tttggtagaa gctgcggttg attttgcgcg tcgcgcccca ccatgcgcgc
     8701 agggtttgcg gttcgagcgc ggtaatatcg ttgcgctgct gcatgatttc gacgattttg
     8761 aaaatgtgtt cgggccgtct gaaaaaaata tcggtgtgcc gcgcggcaat ttggttgttg
     8821 acttggatgt agtcgtcgtc aatccgcagg gtaacgcgca acggggtgga ggaaacgcgg
     8881 ctttgcagca taggcgtgag gatgccgccc agttgtttga cggttttaat cgcgcggtaa
     8941 aacacgcgca tcagttcttc gctttggcgg cggaggttca agccttcata acccatgctt
     9001 tcggcgactt gcggctgcaa atcgaacagc aggcggtctt cggcgcgctt ggcgtttaaa
     9061 tgcagatgga tgcggatgtg ggcgaggcgg cggtagccgt gcgaaagcat accggcttcg
     9121 gcacgcgtca aaatccgctg tttgagcagg tcgggcaggt cggtcgccaa gccttgcgcc
     9181 ttcgctatcc aaagcagggt gtggatgtcg cgcagaccgc ccggacagct tttgatgttt
     9241 ggttccaata ccgcccctga gccttgcgat ttggcgtggc ggtgttccat ctccaccagt
     9301 tttgcctcga caaacgccgg cacattgcgc tgcgcgttca tttttttcgc cagttcgtcc
     9361 gccgtttggc ggttgccgaa caaaaaacgg gcctctaaaa acgccgtgtc ccccgtaata
     9421 tcgtcgcgca cgctttcgca cagttcgcca atgccgccgc tttttacaga cggcatcagt
     9481 ttgcagtccc atagggtttg aacaaaccgg gcaatctgtt cctgaatgcc gtctgaaagc
     9541 ggggcagggg agacaaccgc caaatccaca tccgaacagg gatacagttc gccgcgcccg
     9601 aagccgccca ccgccatcag gcataacgcg ctgttttgaa aatgttctac ccacaatgcc
     9661 gccagtaagg tttcgactgc cgccgtatat tccctgaaaa ataccgacac gcggttggct
     9721 ttcaaataat gcgcttcggc ggcatcgcgc tgccgtttga aggtttccag tgctgaagac
     9781 aggtttgcag gcatttttat tctttcgatt ggcgggaaaa gggaggtgga tggttcggcg
     9841 gtcaaatacc gctttcagac ggcatttgtc gggtatcggc ggaattggtc atcaggttca
     9901 accgttcctg cggcggcagc agcaactgat acgccgccac gcccaaagcc gccgccattt
     9961 tttcgatatt cgacagggcg atgttccagc gtttgcgttc gactgccgac acataagtcc
    10021 tgtccaaacc gcattgccgc gccaattctt cttgcgacca acccttgttc acgcggaaaa
    10081 gccgcatatt gtatgccaat accgcccgca aatcctgttc gtcaggcagt tcggcaggcg
    10141 gggtcaattt gttgcccatc atttgcttcc agataaatgg ttaaaattaa gtatttgctg
    10201 ttacggattt tacttcacat aaaaaccaaa aaaaaggggt ggcggcagcc acacccaaac
    10261 acacacacat caagaggaaa gaggtaaaat caagacagat tgggaaacag caaacaagta
    10321 atctagattt catatcggta ttatcaaaca aaaaccgtta tcgagtattg attcaaatca
    10381 atttagattt gattcgcaaa ccggcaaaga aaaacggcat acccgtttat acggatatgc
    10441 cgtctgatga tgcaggggac tgctgtattt ggcagtggtt tgtgttttag tcctcttgcg
    10501 ccgctgtttg caggtagttc ggcaaaccga ttttgccgat cagttcctgc tgggtttcga
    10561 gccagtcgat gtgttcttcg ttggtgtctt tttgtttttc caacaaatca cggctgacat
    10621 aatcctgttg cgcttctgcc acggaaattg ccgcaatcaa tgcctcatgt ttttctttct
    10681 ctttttccaa atcgcaggcg atgatttctt cggtggactc gccaatcaga agcttgccca
    10741 gttcttgcag gttcggcaga ccttcgagga acagaatgcg ctcgatcaaa tcgtcggcag
    10801 ctttcatttc aacgatggac tgtttgaaga aatgttcgcc cagttcttca aagccccagt
    10861 ttttcaaaat acgggcgtga aggaaatatt ggttgatggt taccagcagc aagcctaagt
    10921 ttttgtttag ctcgcggata accagacggt cgcctttcat acggactcct tttattccga
    10981 atacggatta cagttggctt tggtagtagt tgccttcgcc aattaactcg atcaggcgaa
    11041 gctgctgttc cagccagtgg gcgtggtctt cttcggtatc tttcagttgg gcgaccatca
    11101 aatcgcggct gacatagtct tgcgcctctt cgcacagttt gatgcctttt ttcaaagcgt
    11161 cgcgcacttc gtattcggtt tgcaggtcgg ctttgaggca ggaaaccacg tccgtgccga
    11221 tattcagctc ggcgcgcgcc attttcggcg taccgcccag catcaggatg cgtcggatga
    11281 agtcttcggc gtgtgtggtt tcttcttcca tctcgtgatt gagacgttca aaaagtttgg
    11341 tgtagcccca ttcggagtag aggcgggagt ggataaagta ttggtcgcgt gccgccagct
    11401 cgccagacag caattcgttc atataatcaa caacagcttg attgccttgc ataatatctc
    11461 tctttccgta acttggtttt cggtatgtct gaacagcatc tgtgtcgcta ttcgggatgc
    11521 gtgcattgta tgcaaaagct gtcggcatga caaattttct atttaaaata caaacaatta
    11581 tcaaaagaaa tagggcgtat tccccgatgc tttccaaatc agtatgctgt ttcttatcgg
    11641 tttttttgct gctaaaacta agaatccatc tcatccataa agaacattta cacttattaa
    11701 ccatagcaaa aaacaaatag agcacggttt tttatcaaaa tttataatga atcgttctca
    11761 ttaaccgaca gattcttttg agattatcgg attttgggaa taaattatgc cgtctgaggg
    11821 gctttcagac ggcatgcctg cccggacaga cgctgcttgg agcggctgtc ggtttgaagg
    11881 tgtgtttaat gcgaagggca atctgtcgta tgatgtgttt gcggcagggg ctttgaagaa
    11941 gcccggtatt ttaggacgaa gcgcgcggct gccggggtca atatccgcta tttattccaa
    12001 accttattaa aacttaaatt taaaatcatg aagatagaaa atatcgatat tatttcgccg
    12061 gaactgttcc cgcaggaaac attcaatgaa accgaagcat tcggcgcttt ggtatggttg
    12121 tgggcagttt cgcctattta tcagcatgcc ggcgtacaag aagccgccgt caatatcttg
    12181 ccggtattga aaaacgggca atttgccttg ttcagcagca acggacaccc cgtcgcctac
    12241 tgcacttggg cttatttcga tgaagaaacc gaatggcaat atctccaatc caatgatgtt
    12301 ctgcgccact cggaaaactg gtgcagtgga aacagaatgt ggcttatcaa ctggttcgca
    12361 cctttcggcg acagccgtat gatgaaaaga attctggtgc atctgtttcc gaaacgtgaa
    12421 ataaggtggc tgtaccaccg ggggagtgaa aaaggaaaac ggattatgag gtttccagcg
    12481 ttgtcgaaac aataaaacaa ggctgcctga aagtttccct tcaggcagcc ttgtttcagt
    12541 tctctcgagg ccattcgtat tttttgtttt cgggataaat gtcgtcacct acacgatacc
    12601 aacctctttt tctcatgcag gcatctgctt tacttcctcc tcccccacct attgggtcat
    12661 agccgcactc tttccagtct tttttttcct tagcaaaaag atcatctatt tgtttgctat
    12721 attcttcata agaatatatg cgtaaattga tatttttact catcattgcc ggatattctt
    12781 gttctatacg ggaatacttc cagtataccg agtcatcggg cggaggtttg aatcccccaa
    12841 acgaacaggc agccaatccc atagccaaag agattgatac gatatatttc attttgtttt
    12901 tccttcttct cgaggccatt cgtatttttt gttttcggga taagggtcga aacccttacg
    12961 acaccagcct tttttcctca ggcaggcatc tgcttcagac tttccgccgt ctattgggtc
    13021 atagccgcac tcttgcatgt ctttcagttg ccttcgtctt gctttcgatg gatattggtc
    13081 aagtgccgcc gaggctgatc ccggataggg attggcgtaa tttttcaatt cccaaaatga
    13141 cgcggcgtcc cacggatttg gtttaaatcc cccaaacgaa caggcagcca atcccatagc
    13201 cagagagatt gatacgatat atttcatttt gtttttcctt cttctcgagg ccattcgtat
    13261 tttttgtttt cgggataaat gtcgttacct acacgatacc aacctctttt tctcatgcag
    13321 gcatctgctt cactcccacc gcccccacct attgggtcat agccgcactc tttccagtct
    13381 tttttttctc tagcaaaaga atcatgcagt tgtcttcgtc tctcttcagg tgggtattgg
    13441 tcaagtgtcg ctgaggttaa tcccggataa agtttggcgt aatttgtcaa tctccaaaat
    13501 gccgagtcat cgggcggagg tttgaatccc ccaaacgaac aggcagccaa tcccatagcc
    13561 agagagattg atacgatata tttcattttg tttttccttt cggatgttgc agatcataaa
    13621 tgcgtacagg acggtacata atttcgattt cgttggacac tcctctttca aatacacctg
    13681 tcggactttg ggtttgttta ttttcagggt ctcgatgacc atctgttaca cattgtttat
    13741 tagccatacc gtagcaatta tgcggcgagg tgtaatcccc tataatatcc cttatagcct
    13801 gccattggct tttttgccgg gtattggttc cgactgttgc cggatttctg ccaatcagca
    13861 tgccgataag gtctaattcg tggttttcta tttggatgga ctgacgggcg aaatctgccg
    13921 ttctgggtgt cgttaccccc tgctgcagtt gaaacagcct tttatctgcc cggacaacgt
    13981 tggcggcagg gccgaccatt ttcagttcgg tattggataa aattttctta tcccgattgg
    14041 cttgggtatt caaggtattg agtacattgt cgaccaccag ggttccacgg ctgtgcgagc
    14101 cgacaaacag gccgttttta tccttcccgt agtcttccat gatattgcct aaagccaagc
    14161 ctgaattgct caagccgata acggtcttat tgcctatttt tgccccttcg agcattttat
    14221 gaaaggccgc aacggcgatt tcgggcaatt ttgaaaagcc ccgcccattg gtttccggat
    14281 tgtgcaggaa ataaacattt tcataggtgc gttcatatcg gtttttctcg ggattgaaac
    14341 gccccacata ttgttgggcg gcaaatttgg cggctgcttg tatattattg aaaatgccgt
    14401 tgacgccgac aacgattttt tcaacggttt tgccggtctc cgggtcggtg taacgggcag
    14461 ttttcagatt tttccgttcc tggtcggata cttcgcgcaa ttcgtagata tttcccccaa
    14521 tggctttata ggcttcccaa taatctttaa atgaggcaaa ttcttttttc aactttactg
    14581 agttgtcaaa ctgtttattt atatcctctt caagctgctt atcttcaatc ggctcgccgt
    14641 tttcatccat tttaaaggtc atcaggcggt gttctgcaat aaactggctg cggtaggctt
    14701 cgtctgcaat gccgccgatc agcgtctcat tgataaactc tttggcaaca tccctattga
    14761 gttcgacttc tttcagcaag ccttcgcggt ctgcttttgc caatgcctta tgtgcggatg
    14821 aagtgccttt ttcaataccg gcaatatttt tcctgccctg cgcggaagca atttgccaat
    14881 ctccctcact gatgacggag cgggtaatgg attggcggct ttctgattct ttggcattgc
    14941 ccaacagatt gcccaaaccc atttttgcca aggcgtattt gtcgttgctg tgtatatcgt
    15001 tttgcttcaa accgaatttc aagccgccgg cgttgttttg atttaaattt gcctctttaa
    15061 aggtttcccc tttttcaata cgctcacttc gatatttttc gttcaactcg tcgtctttcg
    15121 ccgaaacctg gtcaaaacgc atcaggctga ccggtttgcc gccgatttta ccgatttctg
    15181 cttctttttt ggtggaatac tgtccgctgg taggcttcgg gctgtatgaa aaaccgccgc
    15241 tcaagcccaa ggcggaagca gccgccgaag catggttttg aatatcttta tgccagattt
    15301 cgcttgtttt cagcaggttt tttgatttgt cggcatctga aacaacagcg gcgccgacca
    15361 atccggtttt gccgtttacg cgaatccgat agccgtctcc tcctgcaaag ataccgcttt
    15421 gctcgttgac ggatgcataa tccgagctgc ttttcgagcg gttatagctg ccaccgacac
    15481 taaagccgta gcctaccgta acttgggcgg aaacattttc ctgtttgcct ttaaacacgg
    15541 cggtatcctg caaactttcg atatgcagac tctctgccgt tacgccaacg cctttgcctt
    15601 taagctgccc gcctttgatg acggtatcgc caccgctttc aatagcggtt tggctgtctt
    15661 tgctgccgat atggctgttg cggtaggcgg tttcgtcgcc gttgccgtaa cctttgccgt
    15721 agtttgctcc ggctgtgaag ccgaaactga tgcctttgtt gatggcgatg gcgactccgg
    15781 cattaaagcc tgcggatttg ttttcgctgc gttcctgatg cgtttggcgg gcggcttcaa
    15841 tctgaacggc attttctgct ttgaggcgtg ttcctttgcc gccgtacaca tcggagccgg
    15901 taatcgtgat gcgggagtct ttgcctgcgc ctgaagcagt cagggaaact ttgccgccgc
    15961 cggtgatttt gccctcttgc acctgcgtgc ctttgatgcg gctttcggag gtgttcttct
    16021 gttcgccgta ggtaacggag acgctgatgc cctgaccggc tgcttttttg ggatttcggg
    16081 cggcattata gagtgccacg ccggaatcta ctcctttatt caaggcgttg gcagcagcca
    16141 tggcattgac ccggctgttt ttgcttttgc cgacggtttg gactgctttt acggcgtcaa
    16201 ccgcgcccat tacggtattc acaaccggaa cgctaatggc gacggttacg cctttttgtt
    16261 cgtaaacctg cttactctct tggctgtaac ggttttgtgc ggcatcgatg ctgatttttc
    16321 cggaggaaat gccgacatcg ccttggggcg aggatatggt cgaaccggtt tgggtgtaat
    16381 gttttcctgc cgaaatcagg gtattgccgt tcaggctgcc gacgacgctt tctgtgtggc
    16441 tgacggtctc ggatcggttg gtttgcgtgt cttttttgct gcccgccgta aagccgatgc
    16501 cgccgctgcc catcagtccg gatttttctt ttttgttcat ttcggcactg cggctgcgtg
    16561 tttcggctgc tttaaggacg atattgtttt ttgccgagag aatggtatgg ttgtctgcaa
    16621 tgatattgct gccagtaacg gtaatatcgc gtcctgaaac cagaatgatt tctttgccgt
    16681 ccagcgtgcc ggatacggct tgtccgtttt ggttcttgag atggcgggtc atcttctgtt
    16741 tgatgccgcc cccgcttcta ccggtgtatt tcagggcatc ttcggtttcg gtatgggctt
    16801 tgccggcttc gactttgata tcccgtccgg ctgccagttt cagacggcct tgttcgctgc
    16861 cgacctctgc tgcacggata cggatgtctc cttttgcatt cagactgaga ttgccccggg
    16921 tgcggatggt gctgccgact tcgttttgtt ctttgcgaat cacatagttg tcggaatcaa
    16981 agatagtgtt ctgattgcgg gaaatgcccg tcgtatccga gcggatgtcg ccgccggcat
    17041 tcagtacggt ttgaccgtct tcagattgat tggtcaattc ggaagccgtc aggacgatat
    17101 tgttgcctgc atccagcaag acgcttccat tctgcctgcc ggtcagataa atgcctgcca
    17161 cccggccgat attgcgtacc gagccttgct cattctgatt gctgcgggtc tcgctgcggc
    17221 tttctatatt gttactcgct ttgagcagca gggcgttttc tgcgccgatg ctgccggtat
    17281 tcgtaatgtc gctgcctgct gcggcgaaga tgtttttgcc ctgcaaatca ccttgcagat
    17341 ttttaatatt ctgtgcgttt aaaattagtg cttcgcgccc ggcaattaag ccgccccggt
    17401 tttcaatggc gccgctgccg atatcaacaa cgctgccgga cagcaacgcc ccttgtccgt
    17461 tcatatcttt ggggcgtgcg cggacataga ctttgggttt caatacggtt tgagttgtcc
    17521 cgtcgggcag ggtaacggtc tcgttttcca gccaaacaat gtcggaagtc agacgggcaa
    17581 cctgttcggc agacagggca atacccggag taagctgcaa ttctttggct atggtaatgc
    17641 cgttatccat caaagccttg aattgctctt cgtcattggt ataaccgtcc aagcggcggt
    17701 agcctgtcag cttggcgatt tgttcgttta ccagtttctg ctcgtaatag ccgtcgccca
    17761 aacgcttgtg gatatggttc gggtcttgtt gcagtgcggc aagcatatag ccgctgccca
    17821 gccatttgcg gtagtcggta aaggcagggt cggtttcaat caaatagcct ttgttgtttg
    17881 gcgcaatggc aaacaagctg ctgttcggca gagtaaatgt aggatggatg ccgttttcag
    17941 caacaacggg tacaacagtg ccgggtatat cagatgcctg ttggggcgca tagcctttat
    18001 aggctgaaat acccatacgg atggagctga cttcgggggc cggttcgtag ggagaccgac
    18061 tgtatcccgt agaatcccgc cctttcttgt gatgacggtg gtaacggtgc aagtcccctt
    18121 tatcggttat ggtttttgtt cccaaagttt catcattgtc caatgcggat tcgggcgtac
    18181 cgacgatcaa tctgccgccg gcaataatcc ggctgttatg atttttcagc ttggcggcat
    18241 ctaaaaccaa attgccgcca ctgatgattt gaccgggctt ggattcggta attttgctct
    18301 cggcggtgat tcgttcgtaa tcgtatttgt accagacaga gtgggggctg ccgtccggag
    18361 tccgcatatg taaagactca tcttcaaata tttcccagcc caactctttt tgagaacctt
    18421 ccggatagcg ttctgttctg ccttccgcct gatattcgat acggtgttcg cgatgggttt
    18481 cttccgtatg gaaacgcaga tgctcattgg tattctgcaa atcttttgta gcgatacgga
    18541 tattgcctga tgattcgatt gccgcactgc ggttgtgcag tgatgtattt gctccttgca
    18601 cctgtcggct tccattcaat gcagaaccga tatgaagatc gccggagctg gacaataatg
    18661 ccgcctctcg gttctcaatt tcccgcgctc caatatccaa ccgctcccgc gctgcaatta
    18721 ccgccgcttt ggtttcgccg ttgaccgttt cttcccggtt caacaaggta tctgcctcaa
    18781 ctgccacacg gctgccgtaa attctgcccg tgccggcatt gtccgacttg gcttcggttt
    18841 gcagcagcgt tataccgttg ctgttgatta aacccctgtt ggtgatgccg tttttgccgt
    18901 ttaacccggt gcggtttccg gattggattt taccggagac agtgttgtcg atttgggcgg
    18961 cggtcaggga tacggtatcg cctgcctgta tgatgcgggt gtttttcaga cggccttggg
    19021 tggagaacgt gagtgtgcgt ccggcttcaa tatcgcgttt gccggcaaaa tcatcatgaa
    19081 gagaaacgga aacatcgcgt gcggcggtta atatgccgtc gttgtccagt gattttgcct
    19141 gtaaggaaac atctttgccc gcaataatcg tgccgtctgt gttattgata tgcaggctgc
    19201 ttttgcctgt atcgcgaata tccagcaaac cggccgagcc gattaagcct gcttgattat
    19261 ttatgccgtc tgaaaccttc aatacactgc ctttgccgct gcggataaag ccttggcggt
    19321 tatcaacggt ttgagcggaa atggtgattt cggcagcatc aatcgaaccg ctgttgctca
    19381 atttgccgtc tgcgcttaac gtaacgccgc ctgttgcggc aaaaatccga cccttgttgc
    19441 ggattacggc gccgttgtcg gtgctgatta aagtgatttt gtctgcgtac atcccaccca
    19501 gtgtggcggt gtcgatggca acggtaggag taacagaatc cgaagaagat ggcgcagaag
    19561 ctgttttggc aagagagccg tcaaaatcca atttgttctt acccgaaacc accttgacat
    19621 ctttacccca aacgcccgca ttgatttcag cagcacgact aaggatacgg gtgtaatcgg
    19681 catcagaggt atccaaacct ttgcccccaa tcacgacttt acccgaagaa acatcaaagc
    19741 ccgtcagatt gccgttattc aaaacaggaa cgcccgaagt cagcgtaacc gaagcggcat
    19801 taatcaatcc gccgccattc acacggatgc ccgacggatt ggcaacgact acttcggcgc
    19861 gtttgccgcc gacttcgata taaccgttca acaacgaagg attactgctg tcaatctggt
    19921 tcacaattac ccgcgcttcg ccgcgtgcca gatggggatt gccttgaatc catccaccga
    19981 gttgcgtttg cgtattgctg cggctgttgt ttagtattac gcctttttca tcaacatcga
    20041 actgcttgaa tcggttaaca gaaacgcctt gggatgacgg agtttgaata ttgacttgcg
    20101 gcaaaccgtt tgctgtctga agaataacgg cttgttggtt tttaggggcg gatttgtcgg
    20161 caatgatgcc ggaagcaggg gcaggggaaa acgcagcaac acccaaagcc aacatgacag
    20221 aaaaggcagc catacggaaa ccgaaggctg cccgggcaga agaaacagaa gcggcaccgg
    20281 tcactcgaac cgaagccgcc tcactatcct gcatactctt gccgtcacga tgaacattct
    20341 ctgctacagc catcatacaa ctgcgtttct tgttgaagat aaccttgtag catcgcttgt
    20401 tcatgatggg ttttcttaaa tgaaatgtaa ggaatagtta aggacaaaat ataggaaatt
    20461 tgaattaaat tgtcaataaa aaactgacag cgtaccctga taatcagatg ttgtacgcta
    20521 attgtgagaa gtatgtcggg atgattattt tgaagttttc tttttattca aaagagttac
    20581 tatgaaagtt aaccgggcgt aaataggctt caataaacag gttatcgtta tttttcaatt
    20641 gggaaaaaat cttccctaac ccatccattc gccaaattat tatgtgggaa ttcggcaatt
    20701 tcaataacgg ctgttgatcc atatctgctc ggtcatttag cgttataaag tcgcaaatag
    20761 cgtcagaatt tacaagatta tcggattttg ggaataaatt atgccgtctg aagggctttc
    20821 agacggcata ggcggctaac acgggtgcgg cttgcgccaa acggcgcggc aggcgcaggg
    20881 aatcgctttt tactttggcg cggtgttccg ggtttaatga tgcccgcaac cgccgtggct
    20941 ttccctcaag gcttccgccg cctgttcgtc ggcgtggtag ctggaacgta ccatcgcgcc
    21001 gatggcggca ttgctgaagc ccagttcgta tgcttctttt tcaaagattt tgaactgctc
    21061 gggcgtaacg tagcgcagga cgggcaggtg tccgtctgaa ggctggaggt actgtccgat
    21121 ggtaatcatt tcgatattgt gcgcccgcat atcgcgcata atttcacgca cgtcttcgtc
    21181 tgtttcgccc aagccgacca tgatgccgga tttggtcggg atgtgcggca tcatttcttt
    21241 ataacgtttt aataagtcta aagaatgttg ataattggca ccgggacggg cttttctgta
    21301 caggctcgga tgggtttcta ggttgtggtt catcacgtcg ggcggggttt cggcaaggat
    21361 tttgagtgcg atgtccaagc gtcctcggaa gtcggggacg aggatttcga ttttggtgtt
    21421 cgggctggtt tcgcggatgg ctttgatgca gtcggcgaaa tgctgtgcgc cgccgtcgcg
    21481 caggtcgtcg cggtcgacgg aggtgatgac gacgtaacgc aggttcatgg ctttgacgga
    21541 ttcggcgagg tttctcggtt cgtcggggtc gagcatattg ggccgaccgt gtcccacgtc
    21601 gcagaacggg cagcggcggg tgcagatgtc acccataatc atgaaggtcg ccgtgccttt
    21661 gctgaagcat tcgccgatgt tggggcagga ggcttcctcg caaacggtgt gcatcttttg
    21721 ttcgcgcaaa atgtctttga tttcaaagaa tttgcgcgat gggagtttgg cgcgtatcca
    21781 ttcgggcttt ttcagttttt cctgaagggg gacgactttg atggggatgc gcgcggtttt
    21841 gtccgcgcct ctgagtttga tgccgcgttt ggggtcgtcg gttttgattt cactcattgt
    21901 tgtctgcttt cggtgtgaat tgtgtttcaa ggtgtgcggt gagtttggcg gcgacttcgt
    21961 ccggcgtggg gcagggttgg acaaaatccg cgatttgcgt catttccata ccggcgtagc
    22021 cgcaggggtt gatgtgggta aacgggctta aatccatatt gacgttgagc gcaagcccgt
    22081 gatagacgga gccgtttttg atacgcagcc ccagtgaggc gattttgcgt tctccgacat
    22141 aaacgccggg gcgtttgggg tctgccgccg cttcgatgcc gtattctgcc aatgtggcga
    22201 tgatgctgtt ttcaagcgcg gaaacgatgt ttctaacact ggttttgcgc cgtttgaaat
    22261 caatcatcgt ataaacgacc aattgcccgg gcccgtgata ggtaatctgc ccgccccggt
    22321 cgatttggac gacgggaatg tcgtcgcgaa tcagcaggtg ttcgggtttt cccgccagtc
    22381 cttgtgtgaa cacgggcggg tgttcgacga cccacagttc gtcttcggtg tcggcattcc
    22441 gtccggcatt aaaggttttc atcgcttcaa aagtcggcag atattcgacc aaacctttgt
    22501 gtatgatttt catctcaaag taccactttg accagttcgt gcgaagtcag cgcacggtag
    22561 atgttgtcca attgttcttg gttttcaacc tttacctgta cggtggcgcc agtatagttg
    22621 cctttgctgc tcggacgcgt ggtgatgtgg tgcgcctgcg tgtcgggggc gtggaggcgg
    22681 acggtgtcta aaaccgcctg ctcgaactcg ggatgcaccg cgcccattac tttcaatggg
    22741 aaggtgcagg gaaattcgat gagggatgtt ttgttttttt gttcggtcat gatgtgctgc
    22801 cttgtcgtgt acggtatgcc gtctgaaggc gggtttgcct ttcagacggc atcggatgtg
    22861 cgttatttta gcctaaaccg cgataacagg ctatcgggaa ggcggaggct tttttgacgg
    22921 cgcggcggtt ctgctatact ggcgcacaat attattttta gaagggtggt ttttatgtat
    22981 cggaggaaag ggcggggcat caagccgtgg atgggtgccg gtgcggcgtt tgccgccttg
    23041 gtctggctgg ttttcgcgct cggcgatact ttgactccgt ttgcggttgc ggcggtgctg
    23101 gcgtatgtat tggacccttt ggtcgaatgg ttgcagaaaa agggtttgaa ccgtgcatcc
    23161 gcttcgatgt ctgtgatggt gttttccttg attttgttgt tggcattatt gttgattatc
    23221 gtccctatgc tggtcgggca gttcaacaat ttggcatcgc gcctgcccca attaatcggt
    23281 tttatgcaga acacgctgct gccgtggttg aaaaatacaa tcggcggata tgtggaaatc
    23341 gatcaggcat ctattattgc gtggcttcag gcgcatacgg gagagttgag caacgcgctt
    23401 aaggcgtggt ttcccgtttt gatgaggcag ggcggcaata ttgtcagcag tatcggcaac
    23461 ctgctgctgc ttcccttgct gctttactat ttcctgctgg attggcagcg gtggtcgtgc
    23521 ggcattgcta aactggttcc gaggcgtttt gccggtgctt atacgcgcat tacaggcaat
    23581 ttgaacgagg tattgggcga atttttgcgc gggcagcttc tggtgatgct gattatgggt
    23641 ttggtttacg gcttggggtt ggtgctggtc gggctggatt cggggtttgc aatcggtatg
    23701 gttgccggta ttttggtttt tgttccctat ttgggcgcgt ttacaggact gctgctggca
    23761 accgtcgccg ccttgctcca gttcggttcg tggaacggca tcctatcggt ttgggcggtt
    23821 tttgccgtag gacagtttct cgaaagtttt ttcattacgc cgaaaatcgt gggagaccgt
    23881 atcgggctgt cgccgttttg ggttatcttt tccctgatgg cgttcggaca gctgatgggt
    23941 ttcgtcggaa tgttggcagg attgcctttg gccgccgtaa ccttggtctt gcttcgcgag
    24001 ggcgtgcaga aatattttgc cggcagtttt taccggggca ggtaggcggt tccgaaacat
    24061 atttgaagcg gaatacaacc ttgcccgggt ttaaataaaa atgccgtctg aaccccgaaa
    24121 acgggacttc agacggcatt tcatcacggc ttatttggcg gttttgctgc tgtcgataat
    24181 tttcataccg gcagaaatca ggctgccgat gtcggcaaca ttggcgggca taatcagcgt
    24241 attgctttct ttggcaagat tgttgaacgc ggcgacgtat tgttccgcaa tcttcaggtt
    24301 gaccgcatcc gcgccgcctt gggtttgaag ggcggcggca atttgacgga tggcttcggc
    24361 attggcttcg gcaacaaggc gcagggattc cgcttcgcct ttggcgcggt tgatgcgggc
    24421 gattttctcg gcatttgacg cattgaccgc ggcctgggcc tcgccttcgg attgttggat
    24481 ttcggcttcg cgctgaccac tggcaaggtt gatttgttcg attttacggc cttcggattc
    24541 ggcgatacgg gcgcgttttt cgcgttcggc agtaatttgc gcctgcattg agcgaaggat
    24601 ttcttgcggc ggaaccaaat ccttgatttc gtaacggaga actttcacac cccaagctcc
    24661 ggcggcttca tcgagggcgg aaacgacggt gctgttgatt tcgtcgcgtt cttcaaacgt
    24721 tttgtccaac tccatacgcc cgataacgga acgcagcgtc gtttgggcaa gctgggtaat
    24781 cgccataatg tagttgctcg aaccgtatga ggcgagtttg ggatcggtta cttggaaata
    24841 gatgatgccg tcaaccgtcc gtcaaggcgc gatggaaacg tccaagcctt tcgacaacgt
    24901 ggacttcctg ctgtgggatg acgacaaagg atttgaagcc gaaaacggca acggctacca
    24961 acaagataat gaaaaattcc ataattcctc cgagtgttaa gggtttgcga tgataagaag
    25021 gttgccttcc ttgcggacga ttagggcgcg cgttcctggt tcaagctctt cttgccccgt
    25081 attttgagcc tgccagtgcg taccgcgata aaaaacttcg taacggttgc cgcctgtgtg
    25141 tcggaggatt tcgacatatt gtccggcatc caaatcctga tatgaatccg tttcaacttt
    25201 tcccacggcg gttttggcgt gtacgaacca aatacccagc gcggaaagca gagcggcggt
    25261 caagacggcg gcaggcgtgc tgccggtcag cccgtaagca atgcccgaac ccgccaaagc
    25321 cgcgctgaca accaaaagat aaaccgttcc cgtcaataat tcgatgatta agacggcaac
    25381 agcggcaaca aaccatacag tcatacattt ccccacaaag cgcgtcgttt gacaaaataa
    25441 cgcaatatca gcagtatagc cgaatttgaa aggatagggc agatatggac acttggcacg
    25501 atgcactcgg cggcgaaaaa cagcagccgt attttcagga aattttaaat gcagtcaggc
    25561 aggaacgttt gtcgggacaa atcatctatc cgccggcggc ggatgtattc aacgcattcc
    25621 gcctgacagc gttcgaccgg gtcaaagccg ttattctcgg acaagacccg tatcacgggg
    25681 cagggcaggc gcacggtttg gcattttccg tcaggcaggg cgtccgcata cccccgtctt
    25741 tactcaatat ctacaaagaa ttggaaaccg acatcgaagg tttttccatt cccgcgcacg
    25801 gctgtctgac agcgtgggcg gagcagggcg tattgcttct gaacacggtt ttgacggtgc
    25861 gtgcaggaca ggcgcattcg cacgcccttt taggctggga acgctttacc gataccgtca
    25921 tcaggcagct tgcgacacac cgcaagcacc ttgtcttcat gttgtggggt gggtatgcac
    25981 aacaaaaagg gaggctgata gacagtcaaa atcatttgat attgaccgca ccgcatccat
    26041 ctcctctgtc ggcatatcgc ggttttttcg gctgccgaca tttttcacag gcaaacagct
    26101 atttgagccg gcacggtatc gatccgataa actggaagct gtgaatgccg atatagccgt
    26161 tgccgccggc gtgttaaaat cgcgtttgat ttgtaatttc catttattag gcaaaacctt
    26221 atggcaatca aaaaaaatca gctttatgca tcactttggg cgggctgcga cgagttgcgc
    26281 ggcggtatgg atgcgagcct ttataaagaa ctatgtgctt acgctattgt ttttaaaata
    26341 tgtttctgat aagcataagt acggcggcgg catgattgag ctgcacgccg gtacgacttt
    26401 tgacgacatc gtcaaactca aaaacaccgc cgacatcggc gaccgcctga ataagattat
    26461 cgcccaaatt gccgaagcca acgacttaaa aggcgtgatc gacgttaccg acttcaacga
    26521 cgaagacaaa ctgggtaaag gtaaggagat gatcgaccgt ttgagcaggc ttgtcggcat
    26581 ttttaaaaag ctcaaccttt cttccaacca agccgaagac gacgatttgt taggtgatgc
    26641 ctacgaatac ctgatgcgcc attttgcgac cgagtcaggc aaatccaaag ggcagtttta
    26701 cacgcctgcc gaagtctcgc gcattatggc gaagattatc ggaatcagcg cagattgccg
    26761 tccagcacca gcgtttatga cccgacctgc ggctcgggtt cgctgttgct caaagccgcc
    26821 gcccaagccg gcagccaaat cagcctttac ggtcaggaaa aagatgtggc aaccgcgtcc
    26881 cttgcccgta tgaatatgat tttgcacaac aacgaaaccg ccgaaatcaa caccgggaac
    26941 accttgtccg attcgtcttt ccgtgatgaa aacgacgggc ttaagacctt cgattttgcc
    27001 gttgccaatc cgccttatcc cgcccgaaaa aaacggcgat tacgcctttt tgctgcatct
    27061 gctcaaaagc ctgaaaccaa gcggcaaagg tgcgattatt cttccgcacg gtgtgctgtt
    27121 tcgcggcaat gccgaagcgc gtattcgcac ggaattgctt aaccttgacc ttattaaagg
    27181 cattatcggg ctgcctgcca acctgtttta cggcacgggc attcctgcct gcatcatcgt
    27241 catcgacaaa gaacacgccc aaaccgccca atttgccgaa gagggaacaa accaagttat
    27301 cagtggcggc agcgtgttta tgattgacgc atcgcgcggc ttcattaaag acggcaacaa
    27361 aaaccgtctg cgtgagcaag acattcacaa aatcatcgac acttccacaa acctcgttac
    27421 agccgtatgg tgcatttaag cgaaatcgca gcacaagatt acaaccttaa tctgcctcgc
    27481 tatatcgaca gcggagaagt tgaagacctg caaaatctcg ccgcctatct ttatggcggc
    27541 atacctgcgc acgatatgga cgcattggaa gcctattggc aagttttagg ccgtatgaaa
    27601 aacgagttgt ttgccgaaca cgatggacgc tttaccacta tacaacggaa tcgattgcaa
    27661 atctttccca ctgttcttga aagaatgcga atttcgattt aacttcggca caccgtctca
    27721 acagcttaaa atcctgcggg attggtgtgg aatttagggc taatctagta cagccccaaa
    27781 tttaatccac tataaaatcg aaagcagcca aatcaaagcc catatattgg cgcaccccga
    27841 ttacgccgcc ttcaaagccg gacacctggc aaagtttgcc gcgtggcaca ctcaaaacga
    27901 ccttgccgcc atccaaccgg gcaggcttat ccggaaatgg agcgaaagcc tgctggacgc
    27961 gttcaaaccc ggcagcctga ttgaagaata cgatttctac caaatcctga cggactactg
    28021 ggcggaaacc ctgcaagacg atgtttatct catcgcccaa gatggctgga aggcggttaa
    28081 aaacctggcc gaaatcacca aagaaagcga tgaagacgcg aacctgaccg tcgtctttga
    28141 ggaaaccgaa accggcaaaa aaggcaaagc caaaaccaag cgcatcagca aaaaataccg
    28201 cagcgaagtc atcgcccccg agctggttgc ccgccgctac ttttcagacg gcatcgccaa
    28261 gctggaagaa aaacaaagcg agctggaacg cctaagccaa gaattggaaa accacataga
    28321 agaacacggc ggcgaagagg gtgcgctgaa cgacgtattg gatgcaaaag gcaaactttc
    28381 cgccaaactt ctgaaaaccg cattggaaga aagcggcata gaagaaggcg aacgggctgt
    28441 tttacaaacc acccaaacac tgatgacgca ggaaaaagcc gcgaaagacg cagtcaaaac
    28501 ccaaatcgaa gccctgaacc ttgccgtatt caaacaattc ggccgacttt ccgaagccga
    28561 aatcaagcag cttgccgttc aagacaaatg gcttgccgat ttacaaagcc gaatcgaaaa
    28621 tcgcttggaa aacagtattc agcagcttat cagccgcttg aacacgctgg aagaccgcta
    28681 ccgcagcccg atggccgagc ttgcccgaga agtggaaaag tggcaaagca aagtcaatgc
    28741 ccaccttgaa aatatgggtt ttggaggctg aaatggcggc acagacaggc tataaggcga
    28801 gcgggttttg agacctttgc aaaattcccc aaaatcccct aaattcccac caagacattt
    28861 aggggatcgc ggttcgggtg tccgcaccgc ttaatacgtc gtgtccacga actaacccat
    28921 ttgctcgaac gccatcgcaa cgcccgtttt atggcgcata tggacaactt tctcccaaac
    28981 tggcaaagca tcaaacaaca gcttaatgcc ttggagttat ttgcacaaat atataattta
    29041 acataatata cattatgcga actatcggaa acagttgtac gtgtccctgt ggtctttcca
    29101 agtaggaaaa ttaaagtatg gccaatgcgg ctgaatgtat agcccggagc atccgcgtat
    29161 ccgaaggtac tgaacgacat gccctgcatc cctttcgacg cttccatcca gccggtattg
    29221 ggaaatacgt tgaccttcaa tataatatac aggcagccga cacacaggat atgccgctgc
    29281 tttttcatca tttcttctgt caaatccttg gaacggtcga tttgaaaaca cggctttaca
    29341 tacgccccag ttccctttgc agggcttgaa tattttgctg cctgtccaat acattgcttt
    29401 gtaatgcatt tatttcttga tggttgatgt tgccgccctt tgccagacgt gcttgtgata
    29461 acattttttg ggcttcaacc aatgctttgc gttcgttgct caattctgtt tcgagaatgg
    29521 agcgtctgct gttgtttgag ggtgcttgtt gcggcggcgg cgtattggat tttgccggct
    29581 tggatactgt tttgaccggg gctttatatt tgacaacctg tccgccgttt gacggtgatg
    29641 ataccggttc gggcgtttgg ggcgggatat agcgttcgct gctgtagttg ccgattgggg
    29701 gcaaatcggt tgagtggcag cttttggacg gcttggtggt gtaaacggtt tctccgttga
    29761 ttgtgcaggt gtagattttg gccgcattcg cacccaatgg gcttgaaatc agggaaaagt
    29821 tgattaggat taaggggagt tttgatttca taatgtgctt gattttcgga taatcatttg
    29881 attttttggt attttttata atgctttctt ggcgttttac gggcttttct tttcggttgg
    29941 ttgcttttga ttttctttcg gggctttggc agcctgcctg ttctttttcc cggcaggttt
    30001 tttgtttttc tttttacttt ctatgtgtat tttggcttct tgactgagtt ttttaatttt
    30061 caggcggtat ccgcctccct gatggctgct gattttaggt aaatccgcat cggcgcacga
    30121 tcctgctggg gctgatgtat atacgctttt gccatttgag ttgcaatggt atacggaggc
    30181 ttgcgccgcc gcgccggaaa gggacaggag acccaaggcg gcaaaaagtc tgatgtttat
    30241 accggtaaaa ggcggtgata acgcccgaat tataccgtta ttggcaggca aagataagca
    30301 ccctgcccgc gcttctttat cgctcggcaa actgtttctc gatttcagtt tcaatccgtt
    30361 ccaattcttc ttgacaagcc agccaaacct cttcgatttg ggcaagttgt gttttgactt
    30421 ttgccagctg ggataaggta ttttgcaatt tttctttgtt tgcttcaagg taagcgtctt
    30481 cttgtgctaa aaatgcttca catgccgtct gaatttcgga aagctgcgcc atttcttttt
    30541 cggcacggtc tattttctgc tgtatcggct tgccgcgtcg ggctttttcc tgacggattt
    30601 gcgcttcgat gcgcttggtg tctttgcggc tttggctttg tgcggatgct gcgggtgcgg
    30661 cggcggcgtt ttcctgtgcc aaacgccatt ggcggtaatc gttcaaatcg ccgtcgaagt
    30721 tcttcagacg gcctttgtcg atcaggagga agctgtcggt agtcgcttca agcaggctgc
    30781 ggtcgtgcga tacgatgatt aaggcgcctt ggaaactttg cagagcgagc gtcagggcgt
    30841 ggcgcatatc caagtccaga tggttggttg gttcgtcaag cagcaacagg ttcggctttt
    30901 gccagataat catggcaagg gcaaggcggg ctttttctcc gccggaaaaa ggttcggttt
    30961 tctgtaacgc catatcgcca acaaaattga agccgccgag gaaatttcgg atttcttgtt
    31021 cgcgtacttt gggagaaagc tgctgaatat gccaaacagg gttttggtcg gcgcggatgg
    31081 tgtcgagttg gtgttgggca aaatagccga tattgagttt ttcggaacgg acgatgctgc
    31141 cggaaagcaa atcgattttg cccgccaagg ctttgataaa ggtagattta ccgctgccgt
    31201 tgacacccaa tagcccgtag cgtgcgccgc tttccagcga cagggtaatg tcatgcagaa
    31261 cggttttgcc ttcgtaaccc aaatcagcgt gttctagctt taacaaagga ttgggcagat
    31321 ggtcgggatg gtaaaactca aaggaaaact cgctgtccag atgcgcgggc gcaacgcgtt
    31381 ctagctttgc caaagccttc atgcggcttt gcgcttgaac ggctttggtg gctttggctt
    31441 tgaagcggtc gataaaggat tgcagatgtt tgatttgcgc ctgctgtttg acataggcag
    31501 cttgttgttg cgcgagacgc tgcgcgcgtt cgttttggta aaaatcgtaa ttgccgccgt
    31561 attgcgtgag tttttgctgc gataattcaa tggtttgggt agttgccgcg ttgagaaaat
    31621 cgcggtcgtg ggaaatgatg atttgcgtgc agggtaaaga ggcaaggtgg ttttccagcc
    31681 acaagacggt ttctaaatcc aagtggttgg tcggttcgtc aagcaagagc aaatcggcgc
    31741 ggcaaatcag ggcttgcgca agattcaagc gcatacgcca gccgccggaa aaggatttga
    31801 cggggcggct gtgttcttct tgcgaaaaac ccagcccgtt caacaatttt gccgcgcggg
    31861 ccggcgcggt ataagcgtcg atttcttcca atttggcatg atattccgcc tgcttcatgc
    31921 cgtcattttg cgcttccgcc tgcctcaatg ccgtctgaaa agcctgcaac tcggcatcgc
    31981 cctgcaaaac gtaatccaaa gcggaaatat ccaaatcggg cgtttcttgg gaaacggaag
    32041 cgagccgcca gtttttcgga atcgagacat cgccgccgtc ctgagtgatt ttacccttga
    32101 ttaaggcaaa caggctcgat ttgcccgttc cgtttttgcc gatcaaaccg acgcgctgac
    32161 cgggattgac ggtagcgttg gctttgtcga gcaggacttt caaaccgcgt tgcagggtga
    32221 ggtttttgat ttcaatcata acggaaacat cgtcgggcgg gaaaagcccg tattttacct
    32281 gaaagtcagt gccgatgccg tctgaaacgg gaaatttacg gctgaagcca agcccaagcc
    32341 ctgcgccctt ccgagtgcag gaaaaccaat gtcctgaatg ccgaatcggt attcatacat
    32401 tccacgccga ttccgattcg ggaaaaatcc gccatgattt tgggatggat aaactcctga
    32461 gccgcgcccg tcccgataat caatatttcc ggatagtcat ccgctttgac atcagacaac
    32521 agattatccg gagtcagttc tgacaatgac tgccatttcg agaggccggc agaatcccta
    32581 tgcagcagca caggcttatt gaaatgtctg ccggacagcc ggatttcacc cgtgcggcgg
    32641 tcatactctg caaaatgttc gtctatcgga ttttcttcaa ataacatttt tttatcctgt
    32701 tgccgcttca tctgtatcag gaggggtgca aaatcagaca aattcatgta ggattagcgg
    32761 atttcatctg acctctcctg ctgatttcag acggcatttg attcaaagtg cggcacaatt
    32821 atatcggcag cggatatttt cgtctttcaa tatttacatt tcagtcggct tacaaggaga
    32881 cacaatgaag ccagtaaaca tcggtctttt aggtttgggt acggtcggcg gcggtacggc
    32941 tgccgtgttg cgggacaacg cggaggaaat ttcccgccgc ttggggcgcg aagtgcgcat
    33001 cagtgccgta tgcgacttga gcgaagaaaa agcccgccaa atctgcccgt ccgcagcctt
    33061 tgtcaaagat ccgttcgaac tggtcgcgcg taaagacgtc gatatcgtcg tcgaattgtt
    33121 cggcggcacg ggcattgcca aagatgcggt gttgaaagcc attgaaaacg gcaaacacat
    33181 cgttaccgcc aacaaaaaac tgctcgccga atacggcaac gaaatcttcc cgctggcgga
    33241 agaaaaaaat gtcatggtgc aatttgaagc ggcagtagcg ggcggtatcc caatcatcaa
    33301 agccctgcgc gaaggtttgg cggcaaacag gattaaatcc atcgccggca ttattaacgg
    33361 caccagcaac ttcatcctct ccgaaatgcg tgaaaaaggc agcgcgtttg ccgatgtact
    33421 gaaagaagcg caggcactgg gctatgccga agccgacccg accttcgaca tcgaaggaca
    33481 tgacgcgggc cataaaatca ccatcatgag cgcgctggca ttcggcacgc cgatgaactt
    33541 ttccgcctgc tacctcgaag gcatcagcaa actcgacagc cgcgacatca aatacgccga
    33601 agaacttggc taccgcatca aactgttggg catcacccgc aaaaccggca aaggcatcga
    33661 gctgcgcgtc caccctaccc tgattcccga aagccgcctc ttggcaaacg tcaacggcgt
    33721 gatgaacgcc gtgcgcgtca acgccgatat ggttggcgaa accttatatt acggcgcggg
    33781 cgcgggcgca ttgccgaccg cttccgccgt ggttgccgat atcatcgaca tcgcccgcct
    33841 ggttgaagcc gataccgccc accgcgtacc gcatctggcg ttccaacccg cgcaagtcca
    33901 agcgcaaacc atcctgccta tggacgaaat taccagcagc tactacctgc gcgtccaagc
    33961 caaagacgaa ccgggcacgc tggggcaaat cgccgcgctg ttggcacaag aaaacgtgtc
    34021 catcgaagca ctgattcaaa aaggcgtgat tgatcagacc actgccgaaa tcgtgattct
    34081 gacccacagc acggtcgaaa aacacatcaa gtcggcaatc gcagccatcg aagcactgga
    34141 ttgcgtggaa aaaccgatta ccatgatccg catggaaagc ctgcatgact gagccgaaac
    34201 acgaaatgcc gacggaagag caggttgccg cgcgcaaaaa agcaaaagcc aaaatccgca
    34261 ccatccgcat ttgggcatgg gtcattttgg cgttgctcgc ttcaaccgcc ctgctctccc
    34321 aatgcgcgat gtccaaaccg caggcaaaac agaaaattgt cgagtcttgc gtgaagaata
    34381 ttccgtttgc cgaaaaatgg caaaacgatt tacgggcccg cggtttagat tcaaacaata
    34441 cccgccttac cgtcgactac tgcaaatgta tgtgggagca gcctttggac agattgagcg
    34501 agaaacagat tagatccttc ggcaaactcg gcgcacaaga acagcttgac ctgctcggcg
    34561 gcgcaaatgc ctttgaagca cgtgacaagc agtgtgttgc cgatttgaaa tcagaataat
    34621 gtggaccgat aaaaaagccg attctttaaa gaatcggctt ttttcataaa aaacggctta
    34681 cagtgcgtct ttcaaagctt tgccggcgcg gaatttaggc gttttggcgg cggcaatggt
    34741 cagaggctcg ccggttttgg ggttgcggcc ttggcgttcc gcacgttcgc ccacgtagaa
    34801 agtaccgaaa ccgaccaaag taacggtgtc gccttgtttc agggcggtgg ttactgcatt
    34861 ggtagtggca tccaaagctt tttgtgcggc ggctttggaa atgtcggctt cttgagcaat
    34921 cgcttcgatc aattcagact tgttcacaat cagtcccttc ctgtcttaaa aaatgatgaa
    34981 atgcccgaat actcggggtt tgtactgctt gagcaacttt cgctttatag caattctgaa
    35041 attgccgtgt caagcaaaaa atacggaatc accctatttg acaggctttc aggacgaaac
    35101 cgcattttta caacacattt cctgcgtttc aatgtttggt tgccctgctg cggggttttg
    35161 gttttgaagc ggattccgcc gccgcttccg caccagaagg ttctgcccaa ggctcaggct
    35221 ggctttccaa acccagagcc aatacctcgt ctatccattt gaccggatgg atggtcaggc
    35281 cggttttcac gttttcaggg atttcttcca agtctttgag gttgtctttt ggaattaaaa
    35341 cgtgtttgat gccgccgcga agcgcagcca acagtttttc cttcagaccg ccaatcggca
    35401 ggacttcgcc gcgcagggta atttcgcccg tcatcgccac atcggcgcgt accgggattt
    35461 tggtaaaggc agataccgcc gccaaggtca tcgcaatacc cgcactaggg ccgtctttcg
    35521 gcgtcgcgcc ttcgggaacg tggatgtgga tgtctttttt ctcgtaaaaa tcaggagcca
    35581 aacccactga ttccgcacgg gagcggacaa ccgaccacgc tgcggacacg gattccttca
    35641 tcacatcgcc caactggccg gtgcactgaa tcacgccctt acccggcaat gctgcggctt
    35701 cgacggtcag caattcgccg ccgacttccg tccacgccaa accggttact tgtccgatac
    35761 ggttttcgct ttcggcaacg ccgtaatcga agcggcgcac acccaaatag tcgtgcagat
    35821 ttttctcatt tactttaacc gccctgggct tggcttttcc ggtttttttg gtttttgagt
    35881 cttcgtccaa ggtaatctgc atcaccacct tgcggcagat tttggcaatc tcgcggtcga
    35941 gcgaacgcac gcccgcctcg cgggtgtagt aacggataat atcgcgcacc gcgctttctt
    36001 cgattgccaa ttccccttct tttacgccgt tgcgcttcat ttgcttcggc acgaggtact
    36061 gcatcgcgat attgattttt tcgtcttcgg tatagccgga cagacggatg atttccatac
    36121 ggtcgagcag cggtgtcggg atattcaggc tgtttgaagt cgcaataaac atcacatcgc
    36181 tcaaatcgta atccacttcg gcataatgat cggcgaactt gttgttttgc tcgggatcaa
    36241 gcacttcgag caacgcgctg gcgggatcgc cccggaagtc gctacccaat ttgtcgattt
    36301 cgtcgagcag gaacaatggg ttttttacgc cggcttttgc catattctgc aaaatcttac
    36361 cgggcatgga gccgatatag gtgcggcggt gtccccggat ttcgctttcg tcgcgcacgc
    36421 cgcccaaagc catgcggaca tatttccgcc ccgttgcttt ggcgatggat tcgcccaaag
    36481 aggttttgcc cacgcctgga gggccgacca ggcacagaat cgggcctttg agtttgtcca
    36541 tacgtttttg gacggcgagg tattccaaaa tccgttcttt gactttttcc aggccgtagt
    36601 ggtcggtatc cagcaccaat ccggctttgg cgatgtcttt gctgacgcgg gattttttct
    36661 tccacggcag ttcgagcagg gtgtcgatgt agttgcgtac gacggtggat tcggcagaca
    36721 tcggcggcat cattttgagt tttttcagtt cggacaggca tttttcttcc gcttctttgc
    36781 tcatccccgc ctttttgatg cctgcttcca aggcatccag ttcgccgttt tcgtcttctt
    36841 cgcccaattc tttgtgtatc gctttaatct gttcgttcag ataatattcg cgctgggatt
    36901 tttccatttg gcgtttgacg cgtccgcgta tgcgtttttc ggcctgcata atgtcgagtt
    36961 cggattccag ctgtgccagc aggaattcca tccgtttgcc gatttcggga atttccaaaa
    37021 tctgttggcg ttgcgccagt ttcaactgca aatgcgctgc gaccgtatcg gttagccggc
    37081 tgttttcggc aatgccgtta atgctgccga taatttcggc ggggattttt ttattgagtt
    37141 tggcgtattg ttcaaactgc gccaacaggg tgcggcgcac ggcttcgagg tcggtattgc
    37201 cgcccgtgtc ttcttccacg accgtctcta tatgggaaac gaacagaccg cccgtgtctt
    37261 caatggtcag aacacgtccg cgatacagcc cttcgaccaa tacttttacc gtgccgtcgg
    37321 gtagtttcaa cacttgcagg acttgtgcga ccgtaccggt ctgatacagg tcggcggcaa
    37381 ccggttcttc tagcgccgca tcggtttgcg ccaacaggaa aaccggctcc tcgcgggtaa
    37441 tggcgttttc cagtgcggcg atggatttcg gcctgccgac aaacagcggc agaaccatat
    37501 gcgggtaaac gacgacatcc cgcaaaggaa gggttgccaa ggcggcatat tcctcaaaat
    37561 gcttttcttt ttgtgtcata ggtactctct tgtgtctgac agattgccga ttttcgcgta
    37621 cattggggtt gaaggtatta tttcaagcat atgtggttta tttatggagt ttgatgcgat
    37681 gccgtctgaa acattccggc ttcagacggc atgggcttgg aaagacaagg cgggaacaaa
    37741 aaactgttct gtgttgccgc tccttgctgt accatccgta tggtttgcgg ttctgccgcc
    37801 ctattttcaa aacatgacgc aggtattcca tgtcttcttt tatttttccc gataacgggt
    37861 tcgaatggcg caacgaaagt ctgcaaaagc cgcccaaagg ttggcattat gtccgcgaaa
    37921 gtggtgcaaa cggcattttg aaggctgcct atcaaaatat tgcaactgtc tggcagggcg
    37981 atttccacaa tgccaaacag gtgctttccg caatgaagaa gaaggtccgc aaacctgccg
    38041 ccgtccgttc cgatgcggat atcgccgccc ttttccacgc ccaccgtatg aagcaggcgc
    38101 agcagagccg tattctgaat atgcttgccg ttgaaatccg ccccggtttt gtgttggaca
    38161 acaaacgcgc gcccgatata cgctccgctt tgctcgacgt gtacggagag gcggacggca
    38221 aaccgttttt cctgccgctc aatctgctgc tggggtttat gggtgcgcac gagtggcata
    38281 agaaaggggt tgccgttccg cagctgggcg gcagcataca cgttcctttc ggcgtattct
    38341 cgccgttgcg cggcgaatac ctcgacctgc tcgcccatgc gccgtcaacg ggttttcaga
    38401 cggcattcga tatcgggacg ggctcgggcg tgcttgccgc cattttggcg aaacagggca
    38461 ttccttccgt catcggcacg gataccaatc cgaaagccgt cgcctgcgcc cgtgccaata
    38521 ttgcccgttt gggctttgaa aaacaggttg agatacggga aaccgatctg tttcccgaag
    38581 ggtttgccga tctgattgtc tgcaatccac cctggcttcc cgccaagccg acttccgccg
    38641 tcgaatccgc gttatacgac cccgaatctg cgatgctggc tgcgtttttg cgggatgcgc
    38701 cgaaacatct gaatcccgac ggagaaatcc gcctgatcat ttccgatctt gccgaacatc
    38761 tgcacctgcg tccgtccgat tttctggata aggcatttgc tcaggcgggt ttgcgtgttg
    38821 ccgatatgat gaaaaccaag ccgaagcaca aaaaagccgc gaatccgagc gatccgcttg
    38881 cttttgcgcg aacccgggaa accactttcc tataccgttt gaaaaaggca taaggggcgg
    38941 cggcgcggca ttcggccgga ttatccttgt gaaaataccc gctcaagcat actgcccaac
    39001 gccgtctgac gcgttttgac ggtggcggca gcttgccgga aggcttcttc cccgccgaag
    39061 aatacgaact tctctctcgc gcgggtaatg gcggtatata acagctcctt actcaatcca
    39121 gacaatgcat cgtccccttc gtccgaaggt gcggcggaag gcggcagcag ccagacttcc
    39181 cgatattccg aaccttggct tttgtggacg gtcatggcga atgcgggttc aaattcgggc
    39241 aggcagctta ccgctacctt tttaaatccg tccgcatcgg caaaataggc ggcaaggctg
    39301 ccctgccgtc cgacatcttc cataatcagt ccgatgtcgc cgttgaacag ttcaagcgcg
    39361 tagtcgttct gtctgatcat aatcggttct ccggcgaaat aggcctgatg ttccggtatg
    39421 ttcattttgc ggcgtacatg gctgcaatag gcttcgttga agtcttccgc atcctgccgc
    39481 cacgccgcga ggacgacgat atccgagatg cctgcgtatg cggcttcgat attgccgtct
    39541 tttaccgcct gccaataggc tttgtgcgcc cggtacaacc tttcgactcg agcgttcgga
    39601 ctgcattccg aatgttccag ttcgtccgga aaccggtcaa acaatgccca cgccccctca
    39661 tcgcccgata cggcggcacg ggcaaggcag ccgatgccgc tgttgtcgcc gaagcggtgg
    39721 ctgaacgaca gatgggcggt gttttgcgcc aacacgggcg gatttgcgct gacgctgaaa
    39781 ccgtgttccg gaaggaagcc ggccagcctt tggtgcgttt ctccgtccaa aacggttttt
    39841 tgcgacaaaa cggacagcac cgcccctatt ccgacggacg ggagctggtt ttcatccccc
    39901 agcagaatca cgcgcgcgcc ggttttgacc gcttttaaaa gttgcagcat caatgccgta
    39961 tccagcatag aggcttcatc gataaccaat acgtcaaacg gcagcgggta aacagggttg
    40021 aacgccgcct gcattttggg cgggcgcagc ttcagcagtc ggtggacggt ttgcccttcc
    40081 agtttgagca aatggcggcg gacggcctcc ggcgcgtcaa aaccgttgat tgcacggtgc
    40141 agcgcgcgcg ccatatgtgc cgccgctttg cccgtcggtg cggcaagcgc gatgttggga
    40201 agattttcgt cttcaccgca aatcagcgcc agcagtttgg caaccgtcgt cgttttaccc
    40261 gtcccgggtc cgccggtaat caccataaaa gactgcaaca gtgccaaggc ggcggcatcg
    40321 cgctgccctt cgctgcccgt gccttgaaac cattttgcga ggttttgcct cgcgcctgcc
    40381 gcgtcggggg cggacgtgtc ggctgccgcc aagcgtttta tctcggcagc caaatcgtat
    40441 tccaactgcc acatcctgcc caaaaacagc cttctgcctt ccaaaatcaa aggcgcggcg
    40501 gatgttccga ccacgggtgc gagtgccgac agcgcgtcag cctcgccacc gctcaaacgg
    40561 ataaacgaat gaccgttttg caatgcctga aacaggcgtt cggtgcagtt tgcaagcact
    40621 tcgtcgccgg aacccgcata gcgtgccaaa aaccagattg ccgcccttgc cgccgcttgg
    40681 gcaaattcat ctgtctgccg ttccattgta ttccttatcc aaatgccgtc tgaaggcgtg
    40741 gggcttcaga cggcgcggtg ttgtttcggc tgtttaggcg tttgcgccct gtttggggtg
    40801 caggctgccg tctttcatga ccatcacgcg ctcgaagcgg ccggcgagtt cgtcgtcgtg
    40861 cgttacgacc accagccccg ttcccaattc tgttttcagt tccagcatca tatccaaaac
    40921 attcctggcg ttcgcacgat cgagattgcc ggtcggttcg tcggcaagca ggcatttggg
    40981 ttgcgtaacc aaggcgcgtg caatggcggc acgctgccgc tcaccgccgg acagttcgcc
    41041 cgcgcggtgc gccgaacggt gcttcaatcc gaccttttcc agcatcgcca ttgccgtttc
    41101 tgccgcctct tcccgttttt tcttgccgat cagaagcggc atcatcacgt tttccagtgc
    41161 cgaaaattca ggcagaagat ggtggaactg gtacacgaaa ccgagatggc ggttgcgcag
    41221 gatgcccagt tgtcgctggc ttaatgtacg caaatcctcg cccatcagca gcaccctgcc
    41281 ttcagacggc atatccagcc cgcccaaaat atgcagcagc gtcgatttgc cgctgcccga
    41341 agaaccgatg atgccggtgc tttcccctgc gtggatttcc aaatccaagc cgtgcagcac
    41401 ccgaacgtcc aaaccgccgt cccgatagcg tttgcccacg ccttcgcatt tcaaaatcaa
    41461 ctcactcata acgcaaagcc tccgccggtt gggtttttga cgcgcgccgg ctcgggtaga
    41521 gcgtggcaac gaaagacagt cccaaagaaa tgcaggcaat cagggcaacg tcgcccatat
    41581 cgacatcgct gggcaggtag tcgataaaat aaacctgcga attgatgagg tggacaccga
    41641 gcaggttttc aaaaaacgcc acgaccctgc cgacgttcca acccaaaagc acgccgcaga
    41701 ccacacccgc caacgtgccg aaaaagcctg aaaacgcgcc ctgcaccata aaaatcttca
    41761 tcacgccgcc aggggaaaga cccaaagtcc gtaaaatcgc aatgtccgcc tgcttttccg
    41821 taaccgccat caccaaggaa gagacaaggt tgaacgccgc cacggcgata atcagcgtca
    41881 ggatgatgaa catcatccgt ttttccaact cgaccgcctc aaaatagctg cggttgctga
    41941 acgtccaatc gcgtacccaa accgtatccc tttgcgcctc cggaatcagc tttgccgtca
    42001 aggcgggggc gttttgcggg tcggcgagtt tcagccgcag ccccgcaact tccttatcca
    42061 agcggtacag tacgcgcgcg tcttggatat gcgtcatcgc caatgagttg tccacttcgt
    42121 aaacgcccgt cttaaccaga ccgaccacgg taaactgctt caggcgcggc acgactccgg
    42181 caggggtaac gttgccctcc ggcgtgatga cggtaacttt attgccgact tccgccccca
    42241 aagcctccgc caagccgaca ccgaggataa tgtcaaactc gcccggaatc aggtcttcaa
    42301 atttgcctgc cggcattttg tcgccgtatt ccaccacttt gcgctcttca gacggcaaaa
    42361 tgccgcgcat ctgcacgccc ctgatttcgc ccgcattggc cagcaatgcc tgattggaaa
    42421 catagggcgc ggcagccaaa atacctttgc ggttttcggt aaaccgaagc aggttgcgcc
    42481 aatccgtatc cgtattgtcg atatagccga tttcggcgtg cggcgcgaca ttcaggagct
    42541 gcccgcgtat ttctttctga aagccgttca taaccgacaa gacgacaatc agcgcggtta
    42601 cgcccaaggc gattccggca atcgaaacca tcgtgataaa cgacataaag ccgttgcgct
    42661 ttttcgccct gagatacctc aagcctatcc aagcctctag agaaaacata acgctacctt
    42721 aaaaatgtct gcaaacgtgc cgccccggac ggcggtttgg gggcggcggc aaaagtttat
    42781 tgtaccgtaa aacccaggca gcgtccgaac gcccgagtgc gggggacggg gcggcagagc
    42841 gggcggaaaa cttgcacaac gcgtcaaact gccctatcct ttccttcaga aaaaccgttt
    42901 cttgaggaaa acaatgaata tccgaactgc ttttgctttg tgcgccatcg ccttatccgc
    42961 cgctgcggct gcctacgcca aagaaatcaa aatcgatgcc aacaacacgc cttattccga
    43021 agccgacgcg caaaagctgg cggcaacggc agtcggtatg ggtgttaagg aacctatcag
    43081 cctgaacggc ggcagcggca gcattaccgt gtccggcagc agcgcgacgc agtgcgtgtt
    43141 caaagtcggc aacggaggcg cattgcagat tcaagggcta aactgcaagt aaaccgcccg
    43201 gaaaaatgcc gtctgaaggc ttcagacggc attttgcatt ggcggcgtta tgccccgcct
    43261 tctttaatca ggcggcgttc gtacaccgcc tgcgccagcg ttcccgcatc gacatattcc
    43321 aattcgccgc ccaagggaat gccctgcgac agcctgctga ctttgtaagg caggttttta
    43381 aaaaactcgg acaggacata cgccgtcgca ttgccttctg cggtaaaagc ggttgcaata
    43441 atgatttctt cgacttcccc gccgcccagc cgttgcgcca gcctgtccaa tgcgatggcg
    43501 gatacgtcca ttcccaatgc cgtattgatt tgccccatca ggacgaaata cagcccgtcg
    43561 tggcagtttg ccgcttccat attcgacacg tcggcaggca tatgcaccac catcagccgc
    43621 cgcccgtcgc gtgtttcatc ggcacaaata tcgcacaatc cgccttcgca aaacgtgttg
    43681 cacatcgcgc aatggtaaac ctgcttcaat gccgtctgca aggcatccac cagtttttca
    43741 gcctctttgc gcttgtgttg gagcaaatga tacgctatcc gctgtgccga tttcggcccg
    43801 acgttgggta aaaccttcag cgcgtcgatc aatccttgga aggcatcttg ttttttgtgg
    43861 ctcatcatat tccgccgtat gggaaaacgg ccggaatatt ccgaccgtta ttttgtcaac
    43921 aaaagtgtca attactgacc gtcgccgttg tcgaccgatt gcgctccttt ggtctgtttg
    43981 attttgccgt tgaaataacg tatcaacaag tcgaaagtat tggcagactg ctgttgcgcc
    44041 aaagcctgtt ttgcaagcgg aagctgtgcg gcgatatcat ccggcggggt tacagcctgt
    44101 acttcgacaa tcacgggtgc cggcagaccg atcagcctga cgtaggcggg tttgccgttt
    44161 gccggttttg ctttcagcag ttccgcataa gcctcgggcg gcatggactg ccttgcctgc
    44221 tgtgcgccca aaacggacac ttccgaccat ttcacgtcaa cagccttgcc gccgttcagt
    44281 tgggtaagca cgtcttttgc cttgttttcg gcaagtttgg cggcttcggt acggatataa
    44341 gcctgacgta ccgcgtcttt ggcttcggca aacggcaggg ttttctcttc gcggacttct
    44401 ttggcgcgga cgacccacgc ggtttcgctg ttgatggtca gcacttcgga attgtgtttt
    44461 ttcttcaata cgtcgtcgct gaatacggca ttgatcaggt tttcgggcat accggacatt
    44521 tgcgcgtcct gcctactcag ccaagtttct tgggtttcga ctttcaaacc gctgtttttg
    44581 gcggcttcgg caagcgagga aggatggttg aacgcatcgt cgcccaattt ttcttttgcc
    44641 ttgttgaagt cggcaaccgc ctttttcatt ttcaattcgt tttcgacggc ggctttttcc
    44701 tgctcgaaag aaggtttggc ttcatttgcc ggcaaacgcg ccacgcgctc ttcaaacgca
    44761 tttttcactt ctgtttcgct gacggtctgt ttgtctgcaa agtctttcag attcaatgcg
    44821 acatattcca atttgaccgc tttgggaagc aggtagtctt ttttgtttgc gttataaaac
    44881 ttctgcaaat cggcttcaga cactttgact tgggcgatga attcgtcggg gttgaaagtg
    44941 tgcgaacgga tggtgcggtt gacctgcgtc agcctgatca gctgttccgc ctgcgcgtcg
    45001 ccgaccaata cgccgttttg gacgaggttt accaaattct gcaaggcaaa ctgatcgcgg
    45061 atttcttcga caaactggtc ttcagacata tggcgttgcg acaggtagcg gtttaaaagc
    45121 gcgtggtcga atttgccgtt tgcgtcgtgg aaattgggat cgtccacgat aatctgcttg
    45181 atttgttcgg aagaaaccga aatgcccatc agcttcgcgc cctgtttcag gtaggcgcgt
    45241 tgtagcaggg attggaacac cgcgtcgcgc gaagggctgc cgccgtccgc ctgctcgttt
    45301 tggacggcgg cgttaagcga ctgctcgctg attttttcgt cgcccacttg gacgatgtag
    45361 tcggcgcccg gatgggatac cgtgctgacc ccgaagccga cgaaggtcaa tgcaatcagg
    45421 cctaataaga cttgggcggg cgttctgtat ttttcgatgg aatggaacat attttaaatc
    45481 gggatataga atgggaaatt caagtcgggt attgtaacgg tttttatacg cgcctgcacg
    45541 aaggcttaac taacgtttga atatctctcg ataagattca tcgctgaagc cgacatgaac
    45601 ctttccgccg tattccagta cgggacgttt gataaggctg ggcatttcgg acattattct
    45661 gaccgcacct tcctttgagg acagggcttc ctcctgcatc agtgcattaa gtttgcgcca
    45721 tgtagtcccc cgtttgttga gcagtatctc caaaggcacc tgctccagcc acaggctgat
    45781 ttccgcttca gacggcctct gttttttgaa atcccgaaat tcaaactcca agccgtatcc
    45841 ggcaagcctg tttttggctt ttttgaccgt atcgcaattt gggatgccgt gaaggactat
    45901 catttggaaa ccttttgtct gaaataataa aacggatatt ttactataag tgtctgaaaa
    45961 tttgcccgtc tgtttcagac ggcggggcgg ttatgttaca atccgaaaat tcgaaaaatt
    46021 taatctcttg ttcaataaag gctttaccaa tcatgatttc taccaacggc atcaccatgc
    46081 agttcggcgc gaagccgctg tttgaaaacg tatccgtaaa attcggagaa ggcaaccgtt
    46141 acggcctgat cggcgcgaac ggttcaggca aatccacctt catgaaaatc ctcggcggcg
    46201 atttggaaca gacggccggc gaagtggcga ttgaaaacgg cgtgcgtttg ggtaaattgc
    46261 gccaagacca gtttgcctac gaagacatgc gcgtgctgga cgtggtgatg atggggcata
    46321 ccgaaatgtg ggcggcgatg accgaacgtg atgcgattta cgccaatccc gaagccaccg
    46381 aagacgacta catgaaagcc gccgaactgg aagccaagtt cgccgaatac gacggctaca
    46441 ccgccgaagc gcgtgccgcc gaactgttga gcggcgtggg catttccgaa gatttgcaca
    46501 atgcgaaaat ggcggaagtc gccccgggct tcaaactgcg cgtattgctg gcgcaggcgc
    46561 tgttctccaa gccggatgta ttgctcttgg acgaaccgac caataacttg gacattaata
    46621 ccatccgctg gttggaaggc gtgttgaacc aatacgactc cacgatgatt atcatcagcc
    46681 acgaccgcca ctttttgaac gaagtctgca cacacatggc ggatttggac tacaacacca
    46741 tcaccatcta tccgggcaac tacgacgact acatgctcgc ttctgcccaa tcgcgtgagc
    46801 gcgccctgaa agacaatgcc aaggcgaaag aaaaattgca ggaattgcaa gaatttgtgg
    46861 cgcggttcag tgccaacaaa tccaaagccc gtcaggcaac cagtcgtctg aagcaggcag
    46921 acaaaatcaa atcggaaatg gtcgaagtca aaccctctac ccgtcaaaac ccgtatatcc
    46981 gttttgaagc cgatgaaaaa gccaagctgc accgtcaggc tgtggaagtt gaaaaactgg
    47041 cgaaacgctt tgaaacccag ttgtttaaaa acctgaactt catccttgaa gcgggacaac
    47101 gcctcgccat catcggcccg aacggcgcgg gcaaatccac cctgctgaaa ctcttggccg
    47161 gcgcgtacaa ccccgaatat tcagacggtc tgctgccgga cgaaggcagc atcaaatggg
    47221 cggaaaaagc cagcgtcggc tactatccgc aagatcacga aaacgacttc gatgtcgata
    47281 tggatttgag cgaatggatg cgccaatggg ggcaggacgg cgacgacgaa caagtcatcc
    47341 gcggcacttt ggggcgtttg ctcttcggca gtaacgatgt cgtgaaaaaa gtgaaggttc
    47401 tctccggcgg cgaaaaaggc cgtatgcttt acggcaaact gttgctgttg aaacccaatg
    47461 tcttagtcat ggacgaaccg accaaccaca tggatatgga aagcatcgaa tccttgaaca
    47521 tggcgctgga aaaatacaac ggcacgctga ttttcgtctc ccacgaccgt cagttcgttt
    47581 cttccctggc aacccaaatc atcgaactgg acggcaaagg cggatatgaa cactacttgg
    47641 gcgattacga aagttacttg gagaaaaaag gcgtagcata accgccggtt ggaacaatgc
    47701 cgtctgaagc cgcttcagac ggcattgttg ataactttaa aataggaagc atatgcagac
    47761 ttacctcgtc ggcggcgccg tccgcgatta tcttttgggc ttgcccgtca aagaccgcga
    47821 ttgggtggtc gtcggcgcag acgcacaaac catgctggcg caaggcttcc agccggtcgg
    47881 caaagatttt cccgtgtttc tccatcccga aacgcacgaa gaatacgccc tcgcccgcac
    47941 cgagcgcaaa accgccaaag gttacgtcgg tttcagtttc cacgccgaca aagacgttac
    48001 gctggagcag gacttgatgc gccgcgacct gaccatcaac gcgatggcgc aagatgcgga
    48061 cggcaagatt atcgaccctt tcggcggaca acgggatttg gcggcaggca ttttgcgcca
    48121 cgtttccccg gccttcgccg aagaccccgt ccgcatcctg cgtactgccc gctttgccgc
    48181 gcgttacagg tttgaaatcg ccgaagaaac cataaagctg atgcggcaga tggtggaaaa
    48241 cggcgaagcg gacgcattgg ttgccgaacg cgtctggcag gagtttgcga aaggtttgat
    48301 ggaaaaaaat ccgcgcaaaa tgattgaagt gttgcgcgaa tgcggcgcgc tcaaagtctt
    48361 gctgcccgaa gtcaatgccc tcttcggcgt gccgcaacgc gccgactacc atcccgaaat
    48421 cgacagcggc atccataccc tgatgacgct gcaacgcgcc gctgatatgg gtttgagcct
    48481 gcccgaacgc tatgccgccc tgctgcacga cttgggcaaa gccaaaacac cgtccgacat
    48541 cctgccgcgc caccacggac acgacctcgc cggtgtcgaa cccgtgcgcg aagtcaatca
    48601 gcggctgcgt gcgccgaaac attgcgccga gcttgccgaa ttggtttgcc gttggcacat
    48661 tattttccac caagtcggac agcttaaaag ccaaaccatt ctgaacgtat tgaaaaaaac
    48721 cgatgccttc cgccgtcccg aacgctttca gacggcattg aacgtctgca ttgccgacac
    48781 gcaaggccgt ctgaaccgcg aacacacgcc ctacccgcaa cgcgcacact ggttcgccct
    48841 gctcgaagcc gccaatcagg cggattcggg caaaatcgcc gccgaatgcc gcgcgcaggg
    48901 aaaagcgcac cttatcgccg aacaaatcga ccgggcgcgg ctggcacaaa tcgccccatt
    48961 gcaaaaagcg tttcgagcgg cgcaagacaa aacagaaaaa cattaaaacg tccaatgcag
    49021 ccacttttat agtggattaa caaaggggct taggaagcaa aatcatcaaa aaacctgata
    49081 agctcctaat atgaaactaa aaaataagta tcaaaagttc agcaaaattt cagagcaaaa
    49141 gtttagagaa ataatccgct gtttcgctct tgatttgacc gcttccgata ctgctaaaat
    49201 gaccggcatt agtgtacgcg gtatcaatcc tattttcctg aaaatcagac acaggattgc
    49261 tgctctgtgc gaacaaagct caccactgtc cggtgtggtc gaattagatg aatcttactt
    49321 tggtgcgcga cgtatcaggg gtaagcgcgg tcgcggagcg tcaggtaaaa ccatcgtatt
    49381 tggcatactg aaacgcaatg gcgtggtcta tacggaaatc gttcccgacg cttcgaaagc
    49441 ctcactaatc aaggtcatac gtggtcacat atctgctgac agtgaaatca atactgacgg
    49501 ctggaaagca tatgacggtc ttgtcgatat gggctatgag aagcattacc gtgtccatca
    49561 tggttccaat gagtttgctc gaggaaagca acatatcaat ggtattgaat ctttttggag
    49621 ttatactaag gggcgtttgg ctaaatttca tggtatttcc aaagagatgt tttatctgca
    49681 tctcaaagaa acggagttta ggtttaacca ccggcatgaa gatttaggta aaatattaat
    49741 gaagatgctt cgaaataacc caatttaata tttttgcttc ctaagccc
//
LOCUS       DAXHRP010000002        35843 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.002, whole genome shotgun sequence.
ACCESSION   DAXHRP010000002 DAXHRP010000000
VERSION     DAXHRP010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.002"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(767..1069)
                     /locus_tag="ACFM72_000049"
     CDS             complement(767..1069)
                     /locus_tag="ACFM72_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HFC6256697.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(1041..1328)
                     /locus_tag="ACFM72_000050"
     CDS             complement(1041..1328)
                     /locus_tag="ACFM72_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HFC6256698.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            1408..2013
                     /locus_tag="ACFM72_000051"
     CDS             1408..2013
                     /locus_tag="ACFM72_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256699.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            1992..2288
                     /locus_tag="ACFM72_000052"
     CDS             1992..2288
                     /locus_tag="ACFM72_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HFC6256700.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            2285..2494
                     /locus_tag="ACFM72_000053"
     CDS             2285..2494
                     /locus_tag="ACFM72_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256701.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(2664..3845)
                     /locus_tag="ACFM72_000054"
                     /pseudo
     CDS             complement(2664..3845)
                     /locus_tag="ACFM72_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743106.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            complement(4133..4780)
                     /locus_tag="ACFM72_000055"
     CDS             complement(4133..4780)
                     /locus_tag="ACFM72_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HFC6256702.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANNLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(4777..5145)
                     /locus_tag="ACFM72_000056"
     CDS             complement(4777..5145)
                     /locus_tag="ACFM72_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HFC6256703.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(5155..5826)
                     /locus_tag="ACFM72_000057"
     CDS             complement(5155..5826)
                     /locus_tag="ACFM72_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HFC6256704.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIIYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(5991..6710)
                     /locus_tag="ACFM72_000058"
     CDS             complement(5991..6710)
                     /locus_tag="ACFM72_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC6256705.1"
                     /translation="MATLSDKTILITGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            complement(6794..8107)
                     /gene="hpnE"
                     /locus_tag="ACFM72_000059"
     CDS             complement(6794..8107)
                     /gene="hpnE"
                     /locus_tag="ACFM72_000059"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HFC6256706.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLTRHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNTIPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTAQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFAAAETCLQSLSDAV"
     gene            complement(8137..8343)
                     /locus_tag="ACFM72_000060"
     CDS             complement(8137..8343)
                     /locus_tag="ACFM72_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256707.1"
                     /translation="MKAVRDIALWLAVTVWINFFPDNYRYDTVPQGRYGYWHADHPWY
                     PYARFLLPLFLACILFYRHFRKRK"
     gene            complement(8505..9377)
                     /gene="hpnD"
                     /locus_tag="ACFM72_000061"
     CDS             complement(8505..9377)
                     /gene="hpnD"
                     /locus_tag="ACFM72_000061"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HFC6256708.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHRVAGVVGCLIARILGFSDGKTLQYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            9548..11410
                     /gene="hscA"
                     /locus_tag="ACFM72_000062"
     CDS             9548..11410
                     /gene="hscA"
                     /locus_tag="ACFM72_000062"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HFC6256709.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKIALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLVGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVA
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVHAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEELQQI
                     RQGIADLQGRLKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            11487..12143
                     /locus_tag="ACFM72_000063"
     CDS             11487..12143
                     /locus_tag="ACFM72_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC6256710.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISEVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKN
                     ETAESEFEKSVHERRQEGNAGSGRKQLLDLVRRGHREYPYALPRLLAGAASYKPRKSK
                     IRLFKEAYFGKSGTRLTDEIADVIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPR
                     "
     gene            12179..12931
                     /locus_tag="ACFM72_000064"
     CDS             12179..12931
                     /locus_tag="ACFM72_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HFC6256711.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEICEHMWIDDIYFDGLYIYGVLNNKPGELTNIEQGESICVPVD
                     DISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEKEHP
                     ENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLEYGA
                     NPASKTSEGYTALDFARLTGWQNVADLLEPRH"
     gene            12986..13327
                     /gene="fdx"
                     /locus_tag="ACFM72_000065"
     CDS             12986..13327
                     /gene="fdx"
                     /locus_tag="ACFM72_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HFC6256712.1"
                     /translation="MPKITVLPHTTLCPEGAVIDDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(13750..14304)
                     /locus_tag="ACFM72_000066"
     CDS             complement(13750..14304)
                     /locus_tag="ACFM72_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HFC6256713.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHHQNRRDLIALDKAAAGCDSAMLRAQRWLIYTQIAERLAGSGGGFT
                     VTVESVSAACPELEGRYLELVRRAAVSFGFTQGWENPAGGQEKTQAVPDAASGHSVRK
                     PIKINIEARVERYPAYCPTVALKV"
     gene            14517..14714
                     /gene="iscX"
                     /locus_tag="ACFM72_000067"
     CDS             14517..14714
                     /gene="iscX"
                     /locus_tag="ACFM72_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HFC6256714.1"
                     /translation="MKWTDTQRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(14782..15183)
                     /locus_tag="ACFM72_000068"
     CDS             complement(14782..15183)
                     /locus_tag="ACFM72_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC6256715.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            15395..16354
                     /locus_tag="ACFM72_000069"
     CDS             15395..16354
                     /locus_tag="ACFM72_000069"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HFC6256716.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            16422..17732
                     /gene="tilS"
                     /locus_tag="ACFM72_000070"
     CDS             16422..17732
                     /gene="tilS"
                     /locus_tag="ACFM72_000070"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HFC6256717.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRHFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAASDTLAMGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            17806..18591
                     /locus_tag="ACFM72_000071"
     CDS             17806..18591
                     /locus_tag="ACFM72_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HFC6256718.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEAKMPSEEVRKLTAVLPEDGFFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGIGAVILGKGCADAWSPKVLRAGM
                     GAHFLSEIYPQADLEIWLVRYKGRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRAAY"
     gene            18601..18741
                     /locus_tag="ACFM72_000072"
     CDS             18601..18741
                     /locus_tag="ACFM72_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256719.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LI"
     gene            18726..18878
                     /locus_tag="ACFM72_000073"
     CDS             18726..18878
                     /locus_tag="ACFM72_000073"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256720.1"
                     /translation="METHLIVQCRGGGGFGLGVVEMVLTDIAQNRANGIRTNKEFGKK
                     FVKSTN"
     gene            19060..19412
                     /locus_tag="ACFM72_000074"
                     /pseudo
     CDS             19060..19412
                     /locus_tag="ACFM72_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691158.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            19424..19729
                     /locus_tag="ACFM72_000075"
     CDS             19424..19729
                     /locus_tag="ACFM72_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256721.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPKGNAQKDGSAAGIKPH"
     gene            19791..21167
                     /gene="mpl"
                     /locus_tag="ACFM72_000076"
     CDS             19791..21167
                     /gene="mpl"
                     /locus_tag="ACFM72_000076"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HFC6256722.1"
                     /translation="MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYISGPQWLSENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHVGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWDVAEALAPLGGRLNVGKDFDAFVAEIVKNAEVGDHILVMSNGGFGGIH
                     GKLLEALR"
     gene            21374..22426
                     /gene="bioB"
                     /locus_tag="ACFM72_000077"
     CDS             21374..22426
                     /gene="bioB"
                     /locus_tag="ACFM72_000077"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HFC6256723.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRQHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(22576..23142)
                     /locus_tag="ACFM72_000078"
     CDS             complement(22576..23142)
                     /locus_tag="ACFM72_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC6256724.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRSGFVSFAPNLAAVKLNDYAKV
                     RKRITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGSHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITDKQGRFVS
                     GNIIPITQIGDKIPKIDPEKPLSGGLFI"
     gene            complement(23266..23505)
                     /locus_tag="ACFM72_000079"
     CDS             complement(23266..23505)
                     /locus_tag="ACFM72_000079"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256725.1"
                     /translation="MGGCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVRRILSVHIAGI"
     gene            23492..23725
                     /locus_tag="ACFM72_000080"
     CDS             23492..23725
                     /locus_tag="ACFM72_000080"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC6256726.1"
                     /translation="MQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHSNDFGAQGIT
                     ATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(23788..25647)
                     /gene="ilvD"
                     /locus_tag="ACFM72_000081"
     CDS             complement(23788..25647)
                     /gene="ilvD"
                     /locus_tag="ACFM72_000081"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HFC6256727.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVEHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPKNRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(25820..27589)
                     /gene="cysI"
                     /locus_tag="ACFM72_000082"
     CDS             complement(25820..27589)
                     /gene="cysI"
                     /locus_tag="ACFM72_000082"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HFC6256728.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVPERGKARIEQLARSYGLIHDGVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(27616..29430)
                     /locus_tag="ACFM72_000083"
     CDS             complement(27616..29430)
                     /locus_tag="ACFM72_000083"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HFC6256729.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCQAGKDFDRRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQTTPPAGLQTAPDGRYCKAAPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKMMPVARALSSHFELTQNTPAFV
                     KGYAAFAHYEELDKIIADNAVLQDFVQNTPIVDVLHRFPASLTAEQFIRLLCPLAPRL
                     YSISSAQAEVGDEVHLTVGVVRFEHEGRARTGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(29427..30713)
                     /locus_tag="ACFM72_000084"
     CDS             complement(29427..30713)
                     /locus_tag="ACFM72_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HFC6256730.1"
                     /translation="MTAQHQAPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSVLTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDAHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(30752..31675)
                     /gene="cysD"
                     /locus_tag="ACFM72_000085"
     CDS             complement(30752..31675)
                     /gene="cysD"
                     /locus_tag="ACFM72_000085"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HFC6256731.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVTDISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(31713..32453)
                     /locus_tag="ACFM72_000086"
     CDS             complement(31713..32453)
                     /locus_tag="ACFM72_000086"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HFC6256732.1"
                     /translation="METTLFKPALWQIPHIGSGGETALAEKTETLKQRLHRIVGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRF
                     RPVREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(32464..33906)
                     /gene="cysG"
                     /locus_tag="ACFM72_000087"
     CDS             complement(32464..33906)
                     /gene="cysG"
                     /locus_tag="ACFM72_000087"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HFC6256733.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLNAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPHSLGDMAEISGR
                     WRDAVKAKLKSVTERRRFWEKQFNGRFAALVKNQQTAQAEQELAKQLEQNYQGGFVSL
                     VGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGDRTP
                     QEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAAVGA
                     TAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALIAER
                     LQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLHEKL
                     AWFGENGEGENRVGQAYPALGGLNAGQRAA"
     gene            complement(34031..34189)
                     /locus_tag="ACFM72_000088"
     CDS             complement(34031..34189)
                     /locus_tag="ACFM72_000088"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256734.1"
                     /translation="MPSEALFALRTASPHHANGLNARNGFRPFFFRNRYKTENRRIRS
                     RPHIAFSF"
     gene            complement(34202..34858)
                     /locus_tag="ACFM72_000089"
     CDS             complement(34202..34858)
                     /locus_tag="ACFM72_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HFC6256735.1"
                     /translation="MKNKTKVWDLPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVG
                     LFVLFLLVFRLCWGIWGSDTARFSRFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLILPMITGFKYIEGKTSIRFAGKAALAAALSVASLAAAAILLLS
                     "
     gene            34922..35812
                     /locus_tag="ACFM72_000090"
     CDS             34922..35812
                     /locus_tag="ACFM72_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFC6256736.1"
                     /translation="MFPVFHLSGESRRQMLQTALRFPHVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDTLPFAVIAGFPEIMLDTADSLAKRQD
                     INAWVVGCGLGTGRAAVGTLAGILTEHTDKPVVLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVASPDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITKSM"
BASE COUNT         7898 a         9451 c        10289 g         8205 t
ORIGIN      
        1 tgtagagatg gctgtagaga tgggttgtag agatgggttg tagagacgag ttgtagagat
       61 gggcttcagc ccgccgatcc aagcaatccg accgaaaccg gccgcgccgc caatcccccg
      121 aaacctatgc cccgccaatc ctgccactct tcgtcattcc cgccgctttc gtcattcccg
      181 cgaaagcggg aatccagacc ccccgacgca acaggaatct atcggaaaaa ccgaaacccc
      241 cgccaccgtc attcccgcga aagcgggaat ctagacccca aacgcggcag gaatctatcg
      301 gaaaaaacag aaacccccgc cgccgtcatt cccgcgaaag cgggaatcca gaccccgacg
      361 caacaggaat ctatcggaaa aaacagaaat ccccgccgcc gtcattcccg cgcaggcggg
      421 aatccagacc ccaaacgcgg caggaatcta tcggaaaaaa ccgacccccc gccaccgtca
      481 ttcccgcgca ggcgggaatc cagaccccaa acgcggcagg aatctatcgg aaacggctga
      541 aaccgaacgg actggattcc cgcctgcgcg ggaatgacgg cggcaggggt ttcgggattc
      601 ccgccttcgc gggaatgacg gaaagtggcg ggaataacga aaggcgggaa tgaccgcgca
      661 aaaagccgct gcccccttcg gacggcaccg gcaacaaaaa accgcacggc cgaaaccgcg
      721 cgggaaagga tagtcgggcg cgcccgataa gcagcggccg cccccgttat ttcaattggg
      781 cgacatattg gcgcaaaacc tcgttgatgc gcgtctgcca gcccttgccg ccggcgcgga
      841 atttttcgac cacatcggcg gacaggcgta tggtaacgag ttgtttcggg gttttgcctg
      901 tgtttcgttt ttgcattacg cccttttctt ccaattgttt ttgatgggaa aaaagcacct
      961 gtgccaagtc ttcgggcagg gcttcggcaa tggggcgggc aagcgcaaaa tcttcggcgg
     1021 caagttcccg cacttcgccg tcagcgtttg ttaaggattg acgttgcata ttttttaacc
     1081 tctcttttat tcgctttgcg aaaactgatg acacggatgc cgtcttttat cggcgtaaaa
     1141 cagacaatgt gcaggcgttg cgtatcgcct agataagcag cggcaacata acgcggttcg
     1201 gggtaatcaa agcagacatc gggcacaata acggccgttg tccagcgtat ttgcccgact
     1261 gattcaaagg gcaaattccg ctcttcgata ttgcgttgat ttttttcgga gtcaaattca
     1321 atcttcattg cagcttgcag cgtattttgt cgttacatta taagcggcaa aaaaccaaaa
     1381 tgtaaataca aaaaaggaaa ccccgaaatg accatctatt tcaaaaacgg cttttacgac
     1441 gacaccttgg gcagcatccc cgaaggcgcg gttgccgtcc gcgccgaaga atacgccgcc
     1501 cttttggcag gacaggcgca gggcgggcag attgccgcag attccgacgg ccgccccgtt
     1561 ttaaccccgc cgcgcccgtc cgaataccac gaatgggacg gcaagaaatg ggaaatcggc
     1621 gaagccgctg ccgccgcccg tttcgccgaa caaaaaaccg ccacggcatt ccgcctcgcg
     1681 gcaaaggcgg acgaactcaa aaacagcctc ttggcgggct atccccaagt ggaaatcgac
     1741 agcttttaca ggcaggaaaa agaagccctc gcgcggcagg cggacaacaa cgccccgacc
     1801 ccgatgctgg cgcaaatcgc cgccgcaagg ggcgtggaat tggacgtttt gattgaaaaa
     1861 gttgtcgaaa aatccgcccg cctggccgtt gccgccggcg cgattatcgg aaagcggcag
     1921 cagctcgaag acaaattgaa caccatcgaa accgcgccag gattggacgc gctggaaaag
     1981 gaaatcgaag aatggacgct aaacatcggc tgaaaaaata cgtttaccac ctgttggtag
     2041 ccatcgacca actgttcaac gccctaaccg gcggcgcggc ggacgaaacc ctctcaagcc
     2101 gcacctatcg cggcgcgcgg ctcgcccaaa agcccaaaac ccgctggaag gttttataca
     2161 ccctgatcaa cggcgtattt ttcgaccgcc aacactgccg gcaggcgtat atcagcgaac
     2221 tgaaaggcag gcagcacgac gcgcggttca accaaagccg cgccgccggg gaaaagggga
     2281 cgcgatgaac tacttcggca tggtagagtt tctgcgcctg atggcaatgg tgcggccgcc
     2341 atttgtcttc ttctccggca cccgcagcga actgcctact tatcttgacc tcgtggcaga
     2401 actgcgcctg accggatggg agcgttttgc aggcagccaa accttgactg tgagcagcac
     2461 atcaacagca attcaagcta cgacgaccac ctgatttata agttctgacc gcaagtagcg
     2521 tactactttt aaaggcataa gataatcccc gtttaacaga ccattaaacg gggataaatt
     2581 tgtgcaaaag ctaatacaat ttcctacgct tcggcggtgc aaaagctgcc gccaattcgt
     2641 gcaaaagctg ccgccgcctt acattccagt gcaatgccgt ctgaaacttc gctaatctcg
     2701 ggttgccgcg cgctgtgttg ttcttcggta ctcagcaaaa agccgtacag acgctccaat
     2761 cgggcgcggt aggcggtgaa tttattgtag aacattcgga agaaagacag ggcgttttgc
     2821 agtcgtgcga aggcttggac agtctgctgg atatctccga ttttgatttg tccggcaaac
     2881 aggcgcggcg cttgcaaaat aatcgggaaa agtttgatgc cgttggtgaa catatcgtta
     2941 aatccgctca ggcagacgct ttgccgcgca atgcgccaac ggttgcggat aatggcttta
     3001 aagcggtcgg aaagccggcc gtgttcgtgt tgctcgccgt tgtaaaacgc tacgctttcg
     3061 gcgtggtcgc gcacgcggat gagagaataa cggtagtcgc cgttgagttt ttcgttttca
     3121 tagttgtaac gaatcaacgg gttgcctatc cacatggcga taaaggtcgc caaaatcaca
     3181 aatatataga caaaccaaac gatgccgtgc ggaatgtcga agccgaacac ggtcaggata
     3241 ccagccaggc cccacaaaac aacggcaaat tccagagaag taacgaccga attgaccata
     3301 ccgcgcacaa attctatggt cgaggcgata aattcctgcg cgtcctgttg gatacgctgg
     3361 tcgatgttgt ccggcgcgtg gcggcgcatt tgcaggcggt agtagttttt gtcggcaagc
     3421 cagcgcgtgg tcagcacttc gttgagccgc tccgaccatt taatcgccaa gccttgatcg
     3481 agaaagtcgt tgacgacgtt gttaaacgcc cgtatcaaca ccacgcccgc gttcattgcg
     3541 gcaaacatcc aaaatgccga agcattcaaa tcctgcatcg agtcgtaaag ccctttggac
     3601 ataaaggtac tcaacacatt cagccgtact tcggttaaca tcagcgtaac cattgccgta
     3661 atcagcagca atactttgac cgcgcttttc ggtgtcagac aaaggcgcag gatataggca
     3721 aactcccgcc cgcagcgcgt tttccgtgtc aaaaacagaa tcaccgctga agcggcagaa
     3781 actatcaaga gagtctgtaa aagccaaagc ggtgtggaat aaagctcggt ttgccatttt
     3841 tgcatgggaa atctcttacg gtatcaatgc cgtctgaaaa agacgggtac agttgatttt
     3901 ttgatgaagt ttgggaagtt tttctggtca gggcatattg cttgttaatt taccatacaa
     3961 ccacgccgga attaagttta aatttgaata aaaggttcgg gttctgcaaa atacagaacc
     4021 cgaaccttgt tcggatattg aaaccggctg cccgattttg ggcggtacgg cttgcaagta
     4081 tcaagattcg catatgccgt ctgaagttcg gagaggttca gacggcatat gcttatttgg
     4141 gctgctcttc gacgaatctc ggacctttca agatgccgtt gtgagaatag ggcgacagca
     4201 ggttgtatgc ggcggttttg gaaacttgat aaccgcggtc ggtcaggttg ttggcaatct
     4261 gattgaccac tgcgctgacc aaagccccca acaggccgct gttgctgttg ttgctgcctt
     4321 cgcggatgct ggccgaaccc gaccacaact cttttccgtt acgggaatcg accagccgtg
     4381 ctttggcgga tacggtcgtc acgctgtcta aaatttgata tgaagtgccg tattcggtaa
     4441 ccgtaatgta caaaaccgca tcattgccga aaatctgatg cagtttttcc ggtcggacgg
     4501 cgtgaatatc ggcggcattg gtcaagccgt tttctttgaa ggtttcctcc acgactgcgg
     4561 cggggaagac gtaatagccg gcttcggaaa gcggagcggc ggtcgaagcc agtacacccc
     4621 atgttccgtt gacatcgggc gattcgttca gcggcggaac caccaaaatt gaagccggtt
     4681 tgctttcctt gaatgacgtg tagtcgaaat cgggcgcttt ttgaacttgg caggcagaca
     4741 gcgccaacac ggcggcaagc cctaaaatca aaggtttcat cgcttgcctc ctttaccggt
     4801 tttcatcagg aagtccataa atacgcccga ttcgggaaac agccttttct cttcttcaaa
     4861 ctggcggaac gcgccctctt tgtctcccga acgggaaagc agcagtccca aatgggcgtg
     4921 cgcacccggg gcggcattca tttttttgtt gccggcttcc acaaagtatt tttccatctt
     4981 ttcggtctgc ttgcccaacg aagtgtcgtc gtttttcaaa ccttcataga cggtatcggg
     5041 atagccgccg taataataca gggatttttg cccgttgccg ccgcaggcgg tcagagccaa
     5101 gaccgccgca cacagcgaca aacggctcaa ggttttcgga ttcatcattt ctccttaacg
     5161 gttgggttgc catgcgccgt tgtcaacagc ctgaaccagg ctgttgacgg cttcgcggat
     5221 tgccaagtct aaaactttgc cgttcaaagt cgcatcgtag ccggaagtgc cgccgaaacc
     5281 gatgatttca cggttggaaa gtgcgtattc gcccgcgccc tgtgcggaat agatgatttc
     5341 ggaagtattg acgttgacga tattcagagc cacttttgca taggcgattt gcgatttgcc
     5401 gcgacccaaa atgccgaaga gctgatgatc gccgacatct ctgcgtccga attcggttac
     5461 atcgccggta acgacataat ctgcgccttt caggttatgc gctttgccgg aaatgccgga
     5521 ttcctgtttt aatgcgttca aattggtgcg gttcagtacg ttgaagcggt tggtctgttg
     5581 caggtgcgtt accagaatgg tttttgcctg gctgcccaaa cggtcttccc cgtcggagaa
     5641 aatgcctttt tggaagctgg agcggttgtc gaatgttccg acggaaatcg gggtacgaac
     5701 accgtgatat tgcgtattgt aggaggcgac tttctctacc tcgagactgc gtgaggattc
     5761 ggtcgcacag ccggtcagtg aaacggcagc ggcggcaagg acaacggcgg tggaaacggt
     5821 tttcataaaa tttaccctaa ggtcaagtta aggaaataac gggttatcat tattgtcctt
     5881 atgtaaattt aagtcaaggt gtttgtctgt gcgggacgga tgcgcgcgga aggtacggat
     5941 atttttcaaa cggaatcgcg gcgcgggcgg gatgcctgcc ttttccggat ttagaggtaa
     6001 acgatttcgc cactccgccc tttgctttcg gcacttgccc accagacaaa tgcgggcagc
     6061 acgtccccgt agcttttgcg ttcgcttttg gcttcgcccg gatgggattt gatgcgttgc
     6121 ggggaattga tggggccggg gacgaggacg ttggcgcgca ggttgccgaa gcgttcccat
     6181 tcgtcggcgg cgactttgca caggtagttc aacgcggctt tggacgcgcc gaagccgccc
     6241 cagtaggctt tgggtgtttc gccgtggctt tcgccgacga agatgacgga cgcgtcgggc
     6301 gactgcttca gcagcgggaa cagggcgcgg gtcagcccca taggtgcgac ggtgttgatg
     6361 cggtattggt tgacccattc ggcgacggtt tggaaatcca gcggcgagag ggcgtaaaaa
     6421 tagccggcgc agtggacgat gccgtccagt ttgccttgcg tggcttcggc aatggtggcg
     6481 gcgaactgat tgaattcttt ttcttccgca ctcatcaggt cgaaacggat ggcgaagggt
     6541 tcggggtgtc cggcttcgac aatcgcgtca tagacttttt ccagtttttt ctgatggcgt
     6601 gccaccagaa tcacggttgc gcctgccgcc gcataggctt tggcgacctg ttcgcccaga
     6661 ccttgcgatg cgccggtaat taagatggtt ttgtcggaca gtgtcgccat actttttcct
     6721 ttttggtggt cggtcggggg tattttagcg ttttgccgca ccttgtaaag cgtcccgatg
     6781 ccggccggcg ttttcagacg gcatcgctca ggctttgcag gcaggtttcc gccgccgcga
     6841 aacctgattg tacggcggct tcgagcgtgg cggggtagtc cgggtggagg tagtcgccgg
     6901 cggggaagat gcggtgccgg tgcagccacg acaaatccgg cggcggggca tcggctgcgg
     6961 ttgtggcgcg tttttcggtg atgacgcgca cggcttcggg ttcgcccaaa tgcggaagga
     7021 tgcgtttgag gtcggcgtga actttgtccg cccacgctcg gtttgtaaac gcgccgacgc
     7081 ggtcggaaac gctgatgacg gcggacactt cgttttcagg cagtccgagc ctgccccggc
     7141 aaagcagcca ttgtgccgtg ccgtcggcaa ggccggtcag cggggcgggc aggcggacgg
     7201 gttcggcgta gcgcagatag acggtggtga tggcgtgata gcgaaggttt tgatatgccg
     7261 tctgaacgtg ttcgggcgtg ccttcgggca ggagcgcggc ggcgtggtag ggcgcggtgg
     7321 cggggacggc ggcatcgaaa gcttcgccgt tgacgagcac tttcccgtcc gggatggtgt
     7381 tcagacggca tacgcgcgtt tcgaggcgga tgtccgcgcc gagccgttga agctccgcca
     7441 aggcgggttc ggcgacgatt gcgcccaaat cctgcttggg taggagatag tcgctgccgg
     7501 attttttcgt cagcacgccg tcggacaaaa cgttgcacaa cacgcgcagg cttgcggttt
     7561 ccaaaggcgt gttgagcgcg ccccacacca gcggctgcca aaactgcatc acggcggcac
     7621 gcggcacgtt ccgctgtttc agccattgtg caactgtcgt gtcgggctgt ccgaggcgtg
     7681 cggacttctg caaatcggac atatcggcaa gcagtttggc tttgaatgcg gacggtacgc
     7741 gccgggcaag cagcacgccg cccaaaatat gcagcggtgc gggcaggggg agggcgcgga
     7801 actgcaaacc gccgtgcata tgccagtgca gcggtacgcg caaaaaggcg gcacggggat
     7861 ccgaaccgat ggttttcatc aggcgcaaca cgccccggta tgcgccgagc aaaatgtgct
     7921 gcccgttgtc caaaaaaccg aaaccgtcgg tatttccggc cagtgtgcgc gccctgccgc
     7981 ccgcctgccg gccggcttca aacagggtaa cgtcggcgtg ccgcgtcaag gtgacggcgg
     8041 cggacaagcc ggcccagcct gcgccgatga cggcgatttt cgggcgcgga tgcggcgtgt
     8101 tcatcattta ttcctccaat ggttttgcag ccgtatctat ttccgtttcc gaaaatgacg
     8161 gtagaaaagg atacaggcta aaaataaagg cagcagaaag cgcgcatagg gataccacgg
     8221 atggtctgca tgccagtatc cgtaccgtcc ctgtggaacg gtatcatagc ggtaattgtc
     8281 ggggaaaaag ttgatccaaa ccgttactgc cagccataag gctatatccc tgactgcttt
     8341 catttacttc tgctcctgtt taaattccca gcaattcgat ttcaaagcgc gaacgccaac
     8401 gggattgcgc ggttacgatg cagactttca gacgatggtt gaaaccccgt ccggcggggc
     8461 tgtgggaatc gggtttgcct gacgggcggc gggcggtatg cgccttatgc ccgttccggc
     8521 gtgccggggc gcggtttgaa tccgaataac caggttttca gggcaatgcg ttttttgcgc
     8581 ggcgaaggga gggcgatttt gtatttgagg acgttttgcg cgccgtcccg gtcgatttcg
     8641 ttcaatagct cgtaataaac cgccgccata accagtccga ctttttgggc ttttttatcg
     8701 gcagccggca gcagcgatac ggcttcgcgg taggtttcac gggcgcgttt gatttggaac
     8761 gccatcaatt cggcaaaatt gcccgtcggg ctgcattgca aaatcacgct tgcggggaca
     8821 tcaaaccgct gcatttcctc catcggcagg taaatccgtc ccctgcgcgc gtcttcgccg
     8881 acatcgcgga tgatgttggt cagttgcagc gcaagtccca tcttgtcggc gtattgcagc
     8941 gttttgccgt ctgaaaaccc caaaatccgc gcaatcaggc agccgactac gcctgcgacg
     9001 cggtggcaat acagtttcaa ttcctcaaaa ctgccgtaac gcgcctgaac caaatccatc
     9061 tgcatcccgt cgattaaggc ttccagttca tatttcggca gcttgaaggt ttccttaacc
     9121 tgccgcaagg cctgattgac ggggtgttcc ggcatcgcgc cgccgaatac cttgtccaaa
     9181 tcgccgcgcc accagttcaa tgttgcctgt gcaacatcgg ggttggaaca ttcgtcaacc
     9241 acatcgtcca attcgcggca aaaggcatat aaaatcgtta ccgcatcccg tttttcctga
     9301 gtcaggaaac ggaagcccga taaaaaactg gagcggcttt cttctgcttt ttgacggcaa
     9361 tagtcgagtc ctttcacgat ttatattcct aatgatgggc gggaaaggcg gattttatcg
     9421 gcatttggcg gtagagggca atttcggcgg cacgacccaa tccttagcgg tttgctcaac
     9481 tatcggcgca aattctgtta aaatgccgct ttccttcctt tacacaccgc accgacaggc
     9541 agaatttatg gctcttttgc agatttcaga accgggtatg tccgccgccc cgcaccggca
     9601 ccgtttggcg gcaggcatcg atttgggtac gaccaacagc ttggtcgcca ccgtccgcag
     9661 cggcagtgcc gcctgcctgc ccgatgccga agggcgcgtt accctgcctt ccgtcgtccg
     9721 ctatctggaa aacggcggca ttgaagtcgg caaaatcgcc ctgtccgccc aaaaaaccga
     9781 cccgctgaac accgtcagct ccgccaaacg ccttatcgga cggacgcttg ccgatctgca
     9841 tcaaaatacg cattacctgc cttaccgttt cggcgacaat caacgcgtta tcgaactgca
     9901 tacgcggcag ggggtgaaaa cgcctgtcga agtgtcggcg gaaatcctca aaacccttaa
     9961 atcgcgcgcc gaagaaacct tggtcggcga tttggtcggc gtggtgatta ccgtccccgc
    10021 ctatttcgac gatgcccaac gccaggccac caaagatgcc gcgcgtctgg cgggtttgaa
    10081 cgtattgcgc ctgctcaacg aacccaccgc cgccgcaatc gcctacgggc tggacaacgc
    10141 ctcggaaggc acgtttgtcg tgtacgactt agggggcggc acattcgacg tatccgtatt
    10201 gcaactgacc aaaggactgt ttgaagtcaa agccaccggc ggcaacagcg cgttgggcgg
    10261 cgatgacttc gaccatcgtt tgttctgcta cctgctcgaa caaaacggac tctcccaact
    10321 caacgaacaa gacagccaac tcctgctttc gctcgtccgc gccgccaaag aacaattaac
    10381 cacgcaaacc gaagcgcgca ttcaggcgac gctttcagac ggcatggcaa tcgacacaag
    10441 catcagtcgc gccgagttcc acaacctgac gcagcatttg gtgatgaaaa cgctcgaacc
    10501 ggtcaaacag gcgttgaaag atgccggtgt cggtaaaaac gaagtcaaag gcgtaattat
    10561 ggtcggcggt tcgacccgta tgctgcacgt ccagcaggca gtcgccacct ttttcgggca
    10621 aaccccgctg aacaacctca accccgacga agtcgtcgcg ctcggcgcag ccatacaggc
    10681 gaacgtcctc gcaggcaaca aagccgacgg cgaatggctg ctgctggacg ttacgccctt
    10741 gtcgctcggt ttggaaacct atggcggctt ggcggaaaaa atcatcccgc gcaattccac
    10801 catccccacc gcgcgcgcgc aggactttac caccttcaaa gacggtcaga ccgcgatgac
    10861 gatacacgtc gtacaaggcg aacgcgaact ggttgccgac tgccgcagcc ttgccaaatt
    10921 caccctgcgc ggcattccgc cgatggcggc gggtgcggcg cgtatccgcg taaccttcca
    10981 aatcgatgcg gacgggctgc tgtccgtttc cgcccaagaa caaagtaccg gcgtacacgc
    11041 gcaaatcgaa gtcaaacctt cctacggttt ggacgacggc gcgattaccc gaatgcttaa
    11101 agacagtatg gacaacgccg ccgaagatat ggcggcacgc gcccgcgccg aagccgtggt
    11161 cgaagccgaa agcctgaccg atgccgtcaa cgccgccctc gagttggaca gcgatttgct
    11221 ggatgccgaa gaattgcaac agattcggca aggtatcgcc gatttgcaag gccgtctgaa
    11281 agacggaaaa gccgaagaca tccgcgccgc cgccgccaaa ctcggcagca tcaccgacaa
    11341 tttcgccgcc aaacgcatga accgcaacat ccaacgtgcg ctgacaggcc agagtgtcga
    11401 taatatttga tacttaaacg gtttcagacg gcatagagat aacctgatgc cgtctgaagg
    11461 ctcgaaaaca cttgaaaaac atcgatatgg aaaagtcagg cattgtctat ctgatgaaaa
    11521 ccgtcatcaa gggcgtatat aaaatcggca tttcggaggt aagcaatttt gaaggcagaa
    11581 tgcgccattt ggaaaacaac ggctatgcga acgttgccgg gttggaacgc atcctcgctg
    11641 tcaaaaccga caattacaaa gaaaaagaaa acctgctcca tgaaattttc agcaaaagca
    11701 ggataggcga taccgaattg ttcgccgtgg acgaaaacct tgtgaaacgt ttgtttttat
    11761 cgcttcgcgg cgaaatcgtg ttcccgaaaa acgaaacggc ggaatcggaa tttgaaaaaa
    11821 gcgtccacga acgcaggcag gaagggaatg ccgggtcagg ccgcaaacaa ctgcttgatt
    11881 tggtacggcg cggacaccgg gaataccctt acgcgctgcc ccggcttttg gcgggcgcgg
    11941 catcctacaa gccgagaaaa tcgaaaatcc gcctttttaa agaagcatat ttcggcaaaa
    12001 gcggcacgag gctgaccgac gaaattgcag acgtcatcca tatttacacc tgtttttcgc
    12061 gggcggattt ggaaaaagcc tattccgaat atttggaact tttcaaatcc gaatcggatg
    12121 ccgaaggcag aaaaccacgg taaggtgcaa acagataccg tacacgttga ggagcagtat
    12181 gatgggcgat tccgtcattt attatgtaga acaggcagac gaaccggtaa accgtgccgg
    12241 cgaacgcgcc cgtaaaacat tcaaatattt ttggcgcgag cttttttggg aacgccgccg
    12301 catcattccc gccttagatt ttgccatggt caaagcccct tttttccaag acggcgaaat
    12361 ttgcgaacat atgtggatcg acgatattta ttttgacggt ctttatattt acggtgtgct
    12421 gaacaataaa cccggcgaac tgaccaatat cgaacaaggc gaaagcattt gcgttccggt
    12481 tgacgacatc agcgactgga tgttcgtgtg caacggcatt ccctacggcg gctttaccat
    12541 acaggcaatg cgtggacaga tgacggaaga ggagcgtacc gaacacgatg ccgcatgggg
    12601 aatcgatttc ggcgatcccg ggcaggtatt gctggtgtat gaagaaaaag aacatcccga
    12661 aaatctggaa gagcatccga tgtgccggaa ctgtattgac gattttcggc aacagttgtc
    12721 ccaaaatccg gattttctgc atgagcagga cgaagacggc tatacgccgc ttcatcatga
    12781 agccatcgca ggaaatgcac ttatggttca agccatgctt gaatacggcg caaatcctgc
    12841 ctcaaagaca tcggaaggct ataccgccct cgattttgcc cgcctgacgg gctggcaaaa
    12901 tgttgccgac ctgctcgaac cgcgacatta ggcagacagt tttccgaaaa cgaacacaaa
    12961 cactttttac agaaagacaa taaaaatgcc caaaatcacc gtacttccac acacgacatt
    13021 atgccccgaa ggcgcggtta tcgacgacgc gccggaaggc aaaaccgtcc tcgacgtact
    13081 gctcgaccac gacatcgaag tcgatcacgc ctgcgaaaaa tcctgcgcct gcaccacctg
    13141 ccacgtcatc atccgcaaag gtttcgacag tttggaagaa ccgaccgaat tggaagaaga
    13201 cctgctcgac caagcatggg gtttggaagc cgattcgcgc ctgagttgtc aggcggttgt
    13261 cgccggcgag gatttgattg tggaaatccc caaatacacc atcaaccacg cgcgagaaga
    13321 acactgaaaa caggccgtct gaagccggcg cgcttcagac ggcattgttg cgcggataag
    13381 gcgcaatcgc ccgaaaacag gcgttcgtac aggcggaaat ttcgattcta tagtgaatta
    13441 acaaaaatca ggacaaggcg gcgagccgca gacagtacag atagtacggc aaggcgaggt
    13501 aacgctgtac cggtttaaat ttaattcact atatattgat ttttatcggt tttctgacgg
    13561 aataatccag tgcggcatcc gaggcggatt actcggacgc gatgcaccgg tatttatcgg
    13621 ttttgcagcc ggaaaaaccg ccggcgggtt atagtggatt aaatttaaac cagtacagcg
    13681 ttgcctcgcc ttgccgtact atttgtactg tctgcggctc gccgccttgt cctgattttt
    13741 gttaatccac tatactttta gggcgacggt cgggcagtat gccggatagc gttccactct
    13801 cgcttctata ttgattttga ttggttttct gacggaatga cccgatgcgg catccgggac
    13861 ggcttgtgtt ttttcctgcc cgcctgccgg attttcccat ccttgcgtga aaccgaaaga
    13921 gacggcggcg cggcggacaa gctcgagata gcgtccttca agctccggac aggcggcgga
    13981 cacgctttct accgtaaccg tgaaaccgcc gcccgacccg gcaaggcgtt ccgcaatttg
    14041 cgtgtagatg agccaacgtt gggcgcgcaa cattgccgaa tcgcaaccgg cagccgcttt
    14101 atccaaggca atcaggtcgc gccggttttg gtggtgaagg caaaccgtta ctctggagag
    14161 gatatgttgc ccgtccaata tttgatacag tttgcgtatc agcagaatca ggcggtcaaa
    14221 ctcctccatc tccgacaggg aatcaggatg gtcggaagcg gtataaacca gtttggacaa
    14281 ttttgcggca aacatattgt tcatcaatct tccttgtcgg ttgaaacccc gctcttcggg
    14341 gcggtagaat cagatttgtt tgggagggac aactcctccc agatcaggac gacacatagg
    14401 ctggtgcttg atgtgttgtc cggcgagttg aaacattcag caatcctcaa ggggcggcag
    14461 ttttgccgaa acatattcta cacggcttca atgccggacg ataaaaggaa attcatatga
    14521 aatggaccga cacccagcgc atcgccgaag aactctatga cctgcacggc gaaaccatcg
    14581 atcccagaac cgtgcgcttt acccaactgc gcgacctgat tatggcattg cccgaatttg
    14641 acgacgaccc cgcccgttgc ggcgaacgca tcctcgaagc cgtgcagcag gcatggatag
    14701 acgaggcgga ataagtttcg ggaatgccgt ctgaaatgcg gcggtacgcg gttcgtgctt
    14761 ctgtttgcag cgggaatggt tttaccagtc tccttttttc agcctgtcca gttggcggcg
    14821 gtcgcgcttg gtcggtctgc cgtcgggata ggcggaagtg atgcggctga attggtcgag
    14881 ctgtttgcgc tcttccctca atgttgccgt tttcgcgtcc tcttcataca gaagccgcgc
    14941 ctcggatgcc gggcggcgtt ggtggttcaa acctttaacc ttgattttat agggaaggga
    15001 attgagcgtc aggtcgataa tatcgccgat gtctatggtt ttactgtttt tgaccttcga
    15061 gccgtttact tgaaccctac ccagttcgat gtgcttttgc gcaagggaac gggtcttgaa
    15121 aaaacgtgcc gcccaaagcc atttgtccag ccgcatggcg gaagaatcgt gcttgtcttt
    15181 catacgattt tgtttgaaat aattgaattt gtttcgagtt tagcataaga tacgccgcct
    15241 tataactagt atatatgcac taatccactg ttttccatgc tgtccgaaca caaaaagagg
    15301 gtatggaaaa gccgttttgg acaataaatt aactgcggaa tatgcacaaa tagcgtatga
    15361 tagcggcaga atctgttgat gagagcttca ttctatgaaa cctgtttttt tggattttga
    15421 acaacccata gccgaactga ccaacaaaat cgatgagctg cgtttcgtcc aagacgagtc
    15481 tgccgtcgat atttcggacg aaatacaccg tttgcagaaa aaaagcaacg acctgaccaa
    15541 atcgattttc agcaaactca cacccgccca aatttcacag gtttcccggc atccgcagcg
    15601 tccctatact ttggattaca ttgaggcact gtttaccgat tttgaagaac tgcacggcga
    15661 ccgccacttt gccgacgatt atgcgattgt cggcggattg gcgcgtttca acggacaaag
    15721 cgtgatggtc gtcgggcatc agaaagggcg cgacaccaaa gaaaaaatcc gccgcaactt
    15781 cggtatgccc cgtcctgaag gctaccgcaa agccctgcgc ctgatgaaga cggcagaaaa
    15841 attcggcttg cccgtaatga cctttatcga tacgccgggc gcgtatcccg gcatcggcgc
    15901 ggaagaacgc gggcagtcgg aagccatcgg caaaaacctg tacgaactga cgcgcctgcg
    15961 cgttcctgtt ttgtgtaccg tcatcggcga aggcggttca ggcggtgcgt tggcggtcgc
    16021 cgtaggcgat tacgtcaata tgctgcaata ctcgacctat tctgttatct cccccgaagg
    16081 ctgcgcgtct attttgtgga aaaccgccga aaaggcggcg gatgcggctc aggctttggg
    16141 cattactgct gaccgcctgc aaaagctgga cttggtcgat accgtcatca aagaaccatt
    16201 gggcggcgcg catcgggatt tcgggcaaac catgaaaaac gtaaaagccg ttttggaaaa
    16261 acaactgcac gaagcgcaaa gcatcccgct tgccgatttg ctttcgcgcc gtttcgaccg
    16321 cattatggct tacggcaaat tttcggaaca ataattcagg tagaacaagc agcaagcagt
    16381 ttgtctgaaa ctgcttgctt tttctttatc gggacggaac cgtgctgact ttagatgcgt
    16441 ttgagcaatg cttgaaggat tgttttcctc aaggtctgaa tggaaaaaaa acagcggtgg
    16501 cattaagcgg cggcttggat tccgtcgttt tgctgcatct gcttgtccgc gccggaaaaa
    16561 agggcggttt tattccggat gcattgcata tccatcacgg cttgagtccc cgtgccgacg
    16621 attgggcaga tttctgccaa aactattgcg atatgctcgg ggtggggctg gaaacggtta
    16681 aggtctgcgt ggaaaaaaac ggtttgggca tcgaggcggc ggcaaggcaa aagcgttatg
    16741 ccgcgtttgc cgaaaaaggc tttgacgttt tggcgttggc gcaccacagg gacgatcaaa
    16801 tcgaaacctt tatgctggcg gtcgcgcgcg gcggcggttt gcgcgctttg gcggctatgc
    16861 ccgccgtccg cccttttggg gaaaaaggca tcatctggcg gcccttgctg cctttttcac
    16921 gccaagatat atgggattat gcccaaaaac acggtttgcc gaatatcgag gatgaaagca
    16981 ataccgatac ggcttatttg cgaaaccgct tccggcaccg tattttgccc gaactttcgg
    17041 cgcagattcc ccatttcggg cggcatgtgc tgaacaatgt ccgcgctttg caggaagatt
    17101 tggctttgtt ggacgaggtc gtcgttcagg actgccgttg ggtttgcggg gccggttatt
    17161 tcgatacggc gcggtggctg acgttttccc cgcgccggaa aacccatatt ttgcggcatt
    17221 ttctgaagga aaacggcatt cccgtgccga atcagaatgc ccttgccgac attgcccggg
    17281 ttttgacgga ggcaaaaacc ggacgttgga acttgcaagg ctttgaattg catcattatg
    17341 caggcaggct gtttgtgttc cgactggaaa aaacggataa actgcggttt ttgaaagaca
    17401 ggcagataag cggaaattta agggaaatat tgacggggca gggatttgtg ttgaagcggc
    17461 atccgtttgg gcttcctgag catcttttgg agcaggacgg aattttgagg acggtagcgg
    17521 catcggatac gttggccatg ggcggcatcc ataaggatgt gaaaaaaatc cttcagggga
    17581 aacgggtttt gcctgtcctg cgcccaattt ggccgcttgt tgccgacagc ggaaaccgtc
    17641 cattggcgtt ggcaaactgt tgtgcggatt tccaatactc ggtttcagac ggcattttgc
    17701 ccgtccatcc tgactttccc attttatttt gataatatcg caaacagatt tcggcggcgt
    17761 tcagtcgggt attgtccggt tgcatatttc taaaaggctt gtgaagtgaa acacatcagt
    17821 tcgaccaata atgaacacat cagacacctg caccgcctgt tgtcgcaagg aaagttcaga
    17881 cggcaatacg cccaaaccgt tttggagggc gtgcacctgc ttcaggtttt cctgcaatcc
    17941 ggcgggatgc cggtcggggt atatattccc gaagcgaaaa tgccgtctga agaagtccgt
    18001 aaattgacgg cggttttgcc ggaagacggg tttttttccg tttcagacgg catattgaag
    18061 aaaatcagca gcctgacttg tgcggatgat gtgcttgcgc tgattgatat tccagatgcg
    18121 ggtgctttgc cggccggcgg cgattgcgtg gttttggacg gcgtgcaaga cccgggcaat
    18181 gtcggcacgg tgttgcgaag cgcggcggcg gcgggaatcg gcgcggtcat tttgggcaaa
    18241 ggttgtgcgg acgcgtggtc gcccaaagtg ctgcgagccg gaatgggcgc gcatttcttg
    18301 tcggagattt atccgcaggc ggatttggaa atatggttgg tgcgctataa aggccgtgtg
    18361 tttgccaccg ccttgcgcga ggaaaagcag gcggttttgt acggcgaaga tttgtgcgaa
    18421 ccgacagcct gggtgtttgg caacgaaggc gcgggggtcg gtaaagcagt tttagatagg
    18481 gcggacaagt gtgtcaggat accgatgcac gatgcaaccg agtctttaaa tgtcgcgatg
    18541 gcggcgacaa tctgcctgtt tgaacaaatg cgccaacggg cggcgtattg aggaagagaa
    18601 atgccgtctg aaaaaatcta ttacggcgta ttgattttct tatgtatcgc ttctatgctg
    18661 ctgtcgccgt ttttttatgc gggtgctttg aagcccaaga aggcggcatt gcggaaggac
    18721 gggcagtgga aactcatctg attgtccaat gccgtggcgg cggcggtttt ggcttgggtg
    18781 tggtggaaat ggttttgaca gatattgctc aaaatcgtgc taatggaatc cgaacaaata
    18841 aagaatttgg taaaaaattt gttaaatcaa cgaattaaag ttttgtggaa aacaaaacag
    18901 ctctaagcaa atagggcgtt tgtcggtaaa tacggaagag ttgcggcatt atcgggcatc
    18961 tttaacaagt agtgccgtct tgacaggcaa tcggttttta tgggcagctt gcaaaatcgc
    19021 ggatataaaa ttgcgaatcg gttaaagtgt ggggacgcta tgaaaaattg cgaatttttt
    19081 atgacccgac aagggcaatc tatgatagcg gtgcagatta cttaactagg gaaaaacata
    19141 gattagtcgt aattgcaaat agtgcttggg ggctattgct taatttatct tgttattatg
    19201 acgaggtttt ggaaaagcgg aaaataccgt tcggcaaaca ggaaattgat gacgatatgg
    19261 acaaagtgtc cgcccttaag cggaagttta aagatatttc tgaaatcaaa gtaggggatg
    19321 gttgggaata cccgttcaat tatgagcagg gaatgaaaga attagatgaa gtgctattga
    19381 aatacattcc cttttttgaa gaagaacgat aaaggaggtt gatatgcgcg tatctaaaat
    19441 aattggaagt atgttgcttg ttacagcggt tcagaccgta ttttcggcaa atgtttacgc
    19501 gtgccgccat aatggtaaaa ccagttacag ccaaactccg ggaaaacatt gtaccaacgc
    19561 gggtttgggg cgggaccggg tgtacagttc ggttagaccg gcagtaaaag acagggcgga
    19621 agacgcaggg gtcggcgatt attcggacac ggtgagggac gaacacgtcc aaaatccgaa
    19681 aggaaatgca cagaaagacg gttcggctgc cggcatcaag ccgcactgat tgaagccgaa
    19741 tcagcccttg cgctgtcgga cggcaaaatt tgaacgattg gggaactttg atgaaacaca
    19801 tccatattat cggtatcggc ggcacgttta tgggcgggct tgccgccatt gccaaagaag
    19861 cggggtttga agtcagcggt tgcgacgcga agatgtatcc gccgatgagc acccagctcg
    19921 aagccttggg tatagacgtg tatgaaggct tcgatgccgc tcagttggac gaatttaaag
    19981 ccgacgttta cgttatcggc aatgtcgcca agcgcgggat ggatgtggtt gaagcgattt
    20041 tgaacctcgg cctgccttat atttccggcc cgcaatggct gtcggaaaac gtgctgcacc
    20101 atcattgggt actcggtgtg gcggggacgc acggcaaaac gaccaccgcc tccatgctcg
    20161 catgggtctt ggaatatgcc ggcctcgcgc cgggcttcct tattggcggc gtaccggaaa
    20221 atttcggcgt ttccgcccgc ctgccgcaaa cgccgcgcca agacccgaac agccaatcgc
    20281 cgtttttcgt catcgaagcc gacgaatacg acaccgcctt tttcgacaaa cgttctaaat
    20341 tcgtgcatta ccgtccgcgt accgccgtgt tgaacaatct ggaattcgac cacgccgaca
    20401 tctttgccga cttgggcgcg atacagaccc agttccacta cctcgtgcgt accgtgccgt
    20461 ctgaaggctt aatcgtctgc aacggacggc agcaaagcct gcaagatact ttggacaaag
    20521 gctgctggac gccggtggaa aaattcggca cggaacacgg ctggcaggcc ggcgaagcca
    20581 atgccgacgg ctcgttcgac gtgttgctcg acggcaaaac cgccggacgc gtcaaatggg
    20641 atttgatggg caggcacaac cgcatgaatg cgctcgccgt cattgccgcc gcgcgtcatg
    20701 tcggtgtcgg cattcagacc gcctgcgaag ccttgggcgc gtttaaaaac gtcaaacgcc
    20761 gcatggaaat caaaggcacg gcaaacggca tcaccgttta cgacgacttc gcccaccacc
    20821 cgaccgccat cgaaaccacg attcaaggtt tgcgccaacg cgtcggcggc gcgcgcatcc
    20881 tcgccgtcct cgaaccgcgt tccaacacga tgaagctggg cacgatgaag tccgccctgc
    20941 ctgtaagcct caaagaagcc gaccaagtgt tctgctacgc cggcggcgtg gactgggacg
    21001 tcgccgaagc cctcgcgcct ttgggcggca ggctgaacgt cggcaaagac ttcgatgcct
    21061 tcgttgccga aatcgtgaaa aacgccgaag taggcgacca tattttggtg atgagcaacg
    21121 gcggtttcgg cggaatacac ggaaagctgc tggaagcttt gagatagccc gggcgatgcc
    21181 gtctgaaagc ccttcagacg gcatcgcccg gctgcgcggc acaaaggcgg aaaaaccgtt
    21241 tgccccgtat tttcaaacgc gttacacttg ccgccgctgt tttcagccat ttgattaccc
    21301 gcaaccgccg tcattgcgcc ggcggtttgc ctgtcagcgt cattgcgccg ctgtaaatac
    21361 gaaagaacac attatgaccg tatcccccgt cgccttgcgc cgtaagaccg agtgcaagcc
    21421 tcatcccacc gcgcgctatt ggaaaaaatg cgatgtcgaa gccctgttcg gacttccctt
    21481 cctcgacctc atttaccaag ccgccgaaat ccaccgccaa aatttcaacc cgcgcgaaat
    21541 ccagctttcc acgctgttgt ccatcaaaac cggcggttgt cccgaagatt gcgcctactg
    21601 tccgcaatcg gcgcaccaca acaccaatct gggcaaagag cagatgatgg atgtggatga
    21661 aatcgtcgaa aaagccaaaa tcgccaaatc gcgcggcgca agccggtttt gtatgggcgc
    21721 ggcatggcgc ggccccaaac ccaaagacgt ggagacggtt tccgcaatca tcaaagccgt
    21781 caagggcttg ggtatggaaa cctgtggcac gttcggtatg ctcgaagaag gtatggcgga
    21841 agacttgaaa gaggcgggct tggattatta caaccacaac ctcgacaccg accccgaccg
    21901 ctacaacgac atcatccaca cccgccaaca cgaagaccga atggacacct tgggcaaagt
    21961 ccgcaacgcc ggtttgaaag tctgctgcgg cggcatcgtc gggatgaacg aaacccgcgc
    22021 cgaacgcgca gggctgattg ccagcctcgc caacctcgac ccgcagcccg aaagcgtgcc
    22081 gattaaccgg ttggtcaaag tggaaggtac gccgcttgcc gatgccgagg atttggactg
    22141 gacggaattt gtccgcacca tcgccgtggc gcggattacg atgccgcaaa gttatgtccg
    22201 actgtcggca gggcgcagca atatgccgga agcgatgcag gcgatgtgct ttatggcggg
    22261 cgcgaactcg attttttacg gcgacaagct gctgaccacg ggcaatccgg atgaagacgg
    22321 cgacagaatc ctgatggaaa agcttaacct gtatccctta cagtttgagc tggaaggcga
    22381 ggtcgccgaa gtggaaaaag cctctgggat taaagtggat tattgacgat tgcaaaaatg
    22441 ccgtctgaaa cgcggatgcc gtctgaagcc cgaaaaaagg ctttcagacg gcatttccaa
    22501 tatttcttta ccggcgcgtg atgttgccgt cgggcgagac atccagcccg ttcccgttgg
    22561 ggaaatcgct gcggttcaga taaataatcc gcccgataac ggtttttcag ggtcgatttt
    22621 ggggatttta tcgccgattt gagtgatggg gataatgttg ccggaaacga accgcccctg
    22681 tttgtcggtg ataattttga aaatcggcgc aatgccgctg atgccggagg tgttgattgc
    22741 gccgtaggtg gcaaagttgc cgccgctgta ggagatgaag cggtcgcggt aaagttcgac
    22801 ggcgcgagta acgtgcgacc cctgcccgaa tacgacatcc gcgccggaat cgacggcaag
    22861 ccgtgcaaac tcgacgacgt tgcccctgtt ttccccatag aagatttcgg tatcgaacgg
    22921 caggtgttcc gcctgtttcc cttccgcgcc gccgtggaac atcacaatga cgatgtcggc
    22981 tttctgtttg gttttggtaa tccgttttct aactttggca taatcgttca gtttgacggc
    23041 ggcaaggttg ggggcgaagg agacgaagcc ggatcttacg ccgtttttct tcaggatggc
    23101 ggtttcaaac ctgttttcga tgcccgaata tttgatgttc aattcgtcaa ggttcgccct
    23161 ttatgccgtt tccgcaccgc aaaccgccgg ggtcaagccc tcggcgcatc ctgccggaac
    23221 ggaatccccg tactgccgat tgacggttca aaccccgcgc ccgtttcaaa taccggcgat
    23281 gtggacggac aggatgcgcc tgacgaaaag acagccgata ccgtttccat tatcggcgtg
    23341 ggcgacatta tgctcggcag caattatccg gtcgattacc tgcccgatac caatattctg
    23401 aaaaacgtcg aatctgcctt gcaagacgcg gacattaccg tcggcaacct cgaaggcacg
    23461 ctgtttgacg aaggcggtac gccgaaaaaa tgtgcaaccc cccaaaatat gctatgcatt
    23521 ccgaacgccc tccgcatacg ggcaatacct tgccgacgcg ggattcgact acctcagctt
    23581 cgccaacaac cacagcaacg acttcggcgc gcaaggcatc acggcaacgg cggcgagcgg
    23641 cagctctttt acatactcga tcgcgctaaa gccgctgccg ataacgaggc caaaattgcg
    23701 gaaaataccg ccatcgccca gataaatttg tccatcatca gacctttact gttcagacga
    23761 gacagcattt gccgcacgtt ttggggctta tctttcgatt tgcgctacgt cgcgcaccgc
    23821 gcctttgtcg gcggaagtcg ccatcgcgcc gtaagctctt aatgcggcgg agacgtagcg
    23881 gtcgcggttt ttaggcttcc atgctttgct gccgcgcgct tccatttcgg cacggcgtgc
    23941 ggcaagctct tcatcggaaa tggcaaggtg gatgctgcgg ttggggatgt cgatttcgac
    24001 ggtatcgcct tcgtgtacca aaccgatcgc gccaccttcc gccgcttcgg gcgaggcgtg
    24061 tccgatggac aaacctgatg tgccgccgga gaagcgtccg tcggttaaga gagcgcaggc
    24121 tttgccgagg cctttagatt tcaggtagga agtcggatac agcatttcct gcataccggg
    24181 gccgcctttc gggccttcgt agcggatgat gacgatgtcg ccggcgacga tttggttgcc
    24241 caaaatgcct tctactgcgt cttcttggct ttcaaacacg cgggcgcggc cggtgaattt
    24301 gaggatgctc tcgtccacgc ctgcggtttt cactacgcaa ccgcgctcgg cgatgttgcc
    24361 gaacaagacc gccaaaccgc cgtcttgcga gtaggcgtgt tcgacatcgc ggatacagcc
    24421 tttttcgcgg tcgaggtcga gggttttcca catgcggttt tgcgagaacg cttgggtggt
    24481 gcgcacgccg ccgggcgcgg ctttgaagcg ttcgatggcg cgggtgtttt cagggttggt
    24541 tacgtcccat ttttcaatcg cgtctttcag cgtcggtgcg tggatagtgt gcacgtcggt
    24601 gtgcagcttg cccgctttgt ccaattcttt caggatggcg aagatgccgc cggctcggtg
    24661 cacgtcttcc atgtagtagt cgtggttgtt gggtgcggtt ttgcagatgc agggcacaac
    24721 gcggcttaag cggtcgatgt ctgccatttt gaaatccacg cccgcttcgt tggcaacggc
    24781 gagtaaatgc aaaatagtgt tggtgctgcc gcccatcgca atatccatcg tcatagcgtt
    24841 ttcaaacgct tttttggtgg caatgctgcg cggtaacacg gtttcatcgt tttgctcgta
    24901 atagcgtttg gtgatttcga caatcatacg gccggcttcg aggaacaatt ctttgcggcc
    24961 ggcgtgggtc gccaaatacg aaccgttgcc gggtagggac agaccgagtg cttcggtcag
    25021 gcagttcatc gagtttgccg taaacatacc cgaacacgag ccgcaggtcg ggcaggcgtt
    25081 ttgttcgact tcctcgactt gccggttgct gacattgtcg tccgccgatt caatcatcgc
    25141 gtcaatcaag tccaagcggc gttctggttg gatgtttgcc acgccgataa ctttacctgc
    25201 ttccatcggg ccgccggaga cgaagatggt ggggatgttc aggcgcatcg cggcaatcag
    25261 catgcccggg gtgattttgt cgcagttgga aatgcacacc agcgcgtcgg cgcagtgggc
    25321 gttgaccata tattcgatag agtcggcaat caaatcgcgg ctgggcaggg aatacagcat
    25381 accgctgtgt cccatagcga tgccgtcgtc gatggcgatg gtgttgaatt ctttggcgat
    25441 ggcgccggct ttttcgattt cgcgggcaac cagctgaccc atattgtgca ggtggacatg
    25501 acctggcacg aattgggtga aggagttggc aacggcgatg atgggcttgc cgaagtcggt
    25561 ttccatcacg ccggtggcgc gccacaatgc acgtgcgccc gccatattgc ggccgtgggt
    25621 ggaggttttg gagcggtatt caggcatagt gtgtttcctt gtgcctatac cgtctgaaag
    25681 acagggctgt ttcagacggt atcgggtacg gttttttaga gtgggaaaag agggtatttt
    25741 ataccaagta tcggaatttt gcgggattga aacggcgtgc ggcaaaaaag aaaatccccg
    25801 caggaatgcg gggacgggtt caggcgcggg caatcgcgac ggctttggat gcgtcccaaa
    25861 aatcaacggg tgcatttaat acgggtttga cgatgcccgt ccgtatggcg aaatcgccga
    25921 aaccttcgcc gatattgcgt tctgccgccc atttgccgat caggtcgtcc aattcggcaa
    25981 ggatttcggg cagggtgatg ttttctttgt aaagacgggg gatgcgtacg ccttcgcggt
    26041 cgccgccgat gtggaggttg tagcgtccga cggctttgcc gaccagtccg atttccgcca
    26101 acatcgcccg tccgcagccg ttcgggcagc cggtaatgcg ggtaacgatg tagtcgtccg
    26161 acgtgccgtg tttcgccata atcttatcca gctcgccgat gaagtccggc agcacgcgtt
    26221 cggcttccgc cattgccagc gggcaggtcg ggaaggaaac gcacgacatc gcattttcgc
    26281 gcagtttgct gacaccgtcg tgtatcagcc cgtatgagcg ggcgagctgt tcgatccggg
    26341 ctttgcctct ttcgggtaca tttgccacga tgaggttttg gttggcggtg atgcggaagt
    26401 cgcctttgtg gattttggcg atttccaaca cgccggtcag aagctgtttc ccgccttcgt
    26461 caaccaaacg cccgctttcg atgaaaaggg tcaaatgcca gttgccgtct atgcctttca
    26521 cccagccgat gcggtcgccg cgcccggtaa atttgaacgg gcgtatgggt tcgaacggca
    26581 tacccatacg gcgttcgact tccgcgcgga agttgtccaa gcccatattt tgaatggtgt
    26641 agcgggtgcg ggcgtttttg cggtcgctgc ggttgccgaa gtcgcgctgc gtggttacca
    26701 ccgcttcggc ggccttcagc gcgtgttccg gaggcacgaa acccagttcc agtgaaatgt
    26761 tcggataggt tttggtgttg ccgtgttcca tcgaaagccc gccgcccgcc aaaacattga
    26821 atccggcaag ctgtccgttg ccgtctgaaa tggcgacaaa atccaagtcg ttgccgtagc
    26881 agtccacatc atttaagggc gggatgacga ctgcggtttt gaatttgcgc ggcagatagg
    26941 ttttgcccaa aatcggctcg tcttcttgaa ggaagtcgtc agaactttga acttttttgc
    27001 cgtccaccca cacatccaga taaccgcgcg tgcgcggcag caagtgttcg gaaatctttt
    27061 tcgcgtattc gtaagcctgc cggtgcagtt cggactcgat cgggttggac gtgcaaagca
    27121 cgttgcggtt catatccgcc gccgtggcga tggaatccaa acccagtttg tgcaagaggc
    27181 ggtgcatcgt ctgcaacttg gctttcggca cgccgtgaaa ttggaaggtt tgccggttgg
    27241 tcagccggat ggagcggtaa tgactgtttt cccgggcaaa tttgtccagt tctatccatt
    27301 gggacggttt gatgatcccg cccggcagcc ggcagcgcaa aagcataaat ttcaagggct
    27361 cgagttttgc ctcggcgcgt tcggcgcgga tgtcgcggtc gtcctgctca tacataccgt
    27421 ggaagcggat gagttggaag ttgtcgcctt tgaagccgcc cgtgagcggg tctttcaaat
    27481 cgtccaaaat cgtgccgcgt aaaaaattgc tttcggtttt cagacgttcg ttgtcggata
    27541 gcggtttttc ttgccacgcc aaaccttttg tcttggtctg tacggtcatt ttgtgttcct
    27601 cccgattata tttaatcaat aaacatcacg ctgatagcgt ttttcttcgc gcagcatatc
    27661 caaatattct tctgcgccct cttcgtccaa atgtcctgcc ccgataatca catccagcaa
    27721 ggcggcttcc acgtcttttg ccatttttgc cgcatcgccg cacacataga tatgcgcgcc
    27781 ttcctgcagc cattgccaaa gtccttccgc ctgttcgcgg attttgtcct gcacatagat
    27841 tttttcttcc tgatcgcggg accaggcgaa atcgtacctg tgcaggaagc cgtctttggc
    27901 aaactgctgc cattcggttt gatagagaaa atcacgggca aaatgcggat tgccgaaaat
    27961 cagccagttt ttgccttccg cattttctgc ggcacgttgt tggacgaaag cgcggaacgg
    28021 tgcgacgccg gtgcccgagc cgatcatcac aatcggcttg cggctgtctt cgggcagcct
    28081 gaagccgtcg ttgcgttcca caaacacgcg caccgtgccg tcctcttcca gccggtcggc
    28141 aaggaaaccc gatgcgccgc ccgttctggc gcggccttcg tgttcaaaac gaaccacgcc
    28201 gacagttaaa tgcacttcat cgcccacttc cgcctgtgct gaagaaatcg aatacaaacg
    28261 gggtgcaagc ggacacagta aacggatgaa ttgttctgcc gtcaggcttg ccgggaagcg
    28321 gtgcagcaca tcgacaatag gcgtgttttg cacgaaatcc tgcaaaacgg cgttatcggc
    28381 aatgatttta tcgagttctt cataatgggc gaacgcggca tagcctttga cgaaagccgg
    28441 agtgttttgc gtgagttcga aatgagatga aagtgcgcgc gcaaccggca tcatctttcc
    28501 gcccgcctgt atttccgttg ccggatcgat gccgagcagg tctaggattt ccctgaccag
    28561 tgccggatcg ttatcaaacc aaacgccgag cgcgtcgccc gggaggtagt gcaaatccga
    28621 accgctcaaa tcgatttcga tgtggcgcac gtctttatcg gattggcggg cggtgatttt
    28681 ctgattggcc agcagggcgg cgggaaaggg ggctgccttg cagtacctgc catccggtgc
    28741 cgtctgaagg ccggcggggg gcgttgtctg cggcgcgggc gttgcccggt tttttgcggc
    28801 ttcttctttt aagagtgcgg cgatattatc tgtccaggcg tttgcggagg cggtaaagtc
    28861 caaatccgca tcaacgcgtt cgagcagccg ttttgcgccc aattcttcaa aacgccggtc
    28921 gaaatcttta cctgcctgac agaaattcgg ataggaactg tcgcccaaac ccagtacggc
    28981 aaattggagt ttgtccaatt tcggggcttt tttgccgttc agcagtttgt gcagcacgac
    29041 ggcttcttcc ggcggttcgc cttcgccttg ggtggaggta accagcagca ggcggcgttc
    29101 gccggcgatg tttttcgcct tatagtcttt cagttcggcg cgactgactt ggatgccggc
    29161 ggcttccagg ctgtccgccg ctttgtcggc aacggatttc gcattgccgg tttgcgaggc
    29221 ggaaaggacg gttacggaaa aaggttctgc cgccggcaat gccgtctgaa gcgcgggcag
    29281 tcctgcagat gccccgtttc ctgcttttgc ccaagcgtag ccggacagcc acgcccattg
    29341 tgccgcgtcc agccccgaca ggagctgcgt gatttcgggc ggcagaggcg gtaatggcgg
    29401 atttgtgttc tgcatatcgt gttcactcat aaaatcatac ctgccgcaac agtgccgtat
    29461 gtcgcttcgt ctatcaggat aaacgaaccg gcggcggtgt tttccgcata aggcgttgcc
    29521 gtaacgggtt tttgaaggtt gatgcggact ttggcgatgt cgttcatctt caaggattcc
    29581 gcgccggcct cttgttccag cgtgcggaca tccaaaacgc tttcaatttc cccgactttt
    29641 gccggcacgg tttgcgtgcc gtgcttgagc aggtatttgc gcgcggtgtt gagcggacgt
    29701 tcgtcaaacc agcaaagcgt ggcttccaga tgtttttgcg gggcgagcgg ggaattttta
    29761 tcgacaaaaa ggtcgccgcg cgaaacatcg atgtcgcgat ccagccggag ggttgccgcc
    29821 tcgccggcaa aagcctgcgc cacttcccct ttcggcgtga tgatttcgga cacttcggcg
    29881 gtcagcccgt tcggttcgat gcggacggtt tgcccgacgg cgaccgaacc gcgttcgatg
    29941 cgcccctgat agcctcggaa atcatcggcc ttgtcggcat cttggcggac gaccagttgc
    30001 acggggaaat aaaaatcgtc ggcggtgcgg ctgacttcgt ccgcccccgg cagggtttcc
    30061 aaaatggaca ataagggttc gcctttatac caaggcatat tgccgccggg gtaaacaatg
    30121 ttgtcgccca agagtgcgga caccggtacg aaatgcgcgt ctttcaaacc gagctgttcg
    30181 gcaagtcggc ggtatgcctc cacaatggcg ttgaatttgt cttcgctgta atccagcagg
    30241 tccattttgt tgaccgccac cacaatatgc gggcagttga gttggcggag gatggcggaa
    30301 tggcgtttgg tctgcggcag aagctgcaag ggctgcgcgc cgaaatccag ttgggatgcg
    30361 tcaaccagca cgactgccgc cgaagcggtg cttgcgcccg taaccatatt gcgcgtgtat
    30421 tgttcgtgcc ccggcgtgtc ggcgatgatg aatttccgtt tcgccgtgga aaaatagcgg
    30481 tatgccacat cgatcgtaat gccctgttcg cgttcggctt ccagtccgtc ggtcaggacg
    30541 gagaagtcta tggtttcttt caaacctttg cttttgccgg attccaaggt tttgatttgg
    30601 tcggacagca gggctttgct gtcgtagagc agtcgtccga ttagggtgct tttgccgtca
    30661 tcgacgctgc cggcggtaat gaagcggagc ggggcctggt gttgtgccgt catattttct
    30721 tcctcatatc tgcttaaagg gtttttgaaa tttagaaata gccttctttt ttgcgttttt
    30781 ccattgccgc ctcgcttgcc tgatcgtcca gccgggtcgc gctgcgttcg gaaatgtcgg
    30841 taactgccgt ttccctgata atctccgtcg gcgtggacgc ggtgctttct accggacagg
    30901 tgcagctgat gtcgccgacg gtgcggaagc ggacatcaag gatttcggag gtttcagatg
    30961 gcattttcgg ggtgagcggc gttacaggga ccagcagccc cctgcgtctg accacttcgc
    31021 gcctgtggct gtaataaatc ggcggcagct cgaggttttc gcgggcgatg tattgccaga
    31081 tgtcgagttc cgtccagttg gaaatcggga agacgcgcat attttcgcct ttgtgcagcc
    31141 tggtgttgta cagcgaccac agctcggggc gttgcgcctt cggatcccat tgtccgaact
    31201 cgtctcggaa cgagaaaatc cgttctttgg cgcgggcttt ttcttcgtcg cgccgcgcgc
    31261 cgcccatcag cgcgtcaaag ccgtttgcct cgatggtttc caacagcgta accgcctgcg
    31321 ccgcattgcg cgaatcggtt tctttgcgta aaactactgt gcctttggca atggagtctt
    31381 ccacgcgccc cactatcagg cgggcattga gttttgccgc ctgcgcgtcg cggaaagcaa
    31441 tcacttcggg gtagttgtgc cccgtgtcga tatgcaccag cgggaagggc agttttaccg
    31501 gcctgctgcc cagccggaag gctttgcagg cgagggcgag caggaccacg gaatctttgc
    31561 cgccggaaaa gagcagggcg gggttttcgc attccgccgc cacttcgcgg atgatgtgga
    31621 tggattcgga ttccaaccag tcgagttggg cgttgttcgg ttcggttttc gtcataccat
    31681 attccttatt tcttctgtct gatatttatg aattatttgt gcagcccgca ttctttgctg
    31741 tttctgcctt cccaccacca ccgcccggcg cggatgtctt cgcccgcctt gacggggcgg
    31801 gtgcaggggt cgcagcctat gctgggaaat ccttgccggt acaaatcgtt gtaaggcaca
    31861 ttgttggcga ggatgtatgc ccacacgtcg tgttccgacc agtcgaaaat cgggttgtat
    31921 ttgccgatgc cccgtccggc atcgtattcg gcaaacggca gttccgtgcg tgtggcggat
    31981 tgttcgcggc gttgcccggt aagccaggcg tccgcgcctg caatggcgcg gttgagcggt
    32041 tcgatttttc ggatgcggca gcattcgcgg cgcgcttcaa cgctgtcgta aaaggcaaac
    32101 ctgcctttgc tttccacata acggtcggca tcttctcgaa ccggccggaa acgctttatc
    32161 cgcaaatggg gatatgcgcg tccgagcctg tccagcaggt tcagggtttc cgtgtggagc
    32221 agccccgtat ccaaggtaaa aatgccgata ttgaggtttt cgccggcgat aaggtcggta
    32281 atcaccatat cttctgccgc aaggctgctg gcaaaccgtg catcccggtg gctgccgaca
    32341 atccggtgca ggcgttgttt gagggtttcc gttttttccg caagggcggt ttcgccgccg
    32401 gatccgatat gcggtatctg ccacagggcg ggtttgaaca gtgtcgtttc catttttccc
    32461 gccttatgcc gcccgttgtc cggcattcag tccgcccaat gcgggatacg cctgcccgac
    32521 ccggttttct ccttcgccgt tttcaccgaa ccaggcgagt ttttcgtgca gccccaccac
    32581 ttcgcctatg acaatcaatg ccggattcgg cgcggtttcg gcgagttcgg caaggttggc
    32641 gagcgtgccg gttgcggttt tttgagccgg cagcgtgcct tggctgatga cggctgccgg
    32701 cgtgtcgggc gagcgtccgt gctgttgcag ccgttcggca atcagggcgg ctttgagcgc
    32761 acccatataa atcaccaagg tctggcggct gcgggcgagg gtctgccatt cgatgtcggg
    32821 cgcatccgcc ttgcggtggc cggttacgaa aaccgcactt tgggcataat cgcggtgcgt
    32881 gagcgggata ccggcatagg cggtcgcgcc gacggcggcg gtaatgccgg ggacgaccga
    32941 aaacggaatc tgatggcgtg ccaaggtttc caattcttcg ccgccgcgtc cgaacacgaa
    33001 agggtctccg cctttcaaac gcaccacgcg cctgccttcg cgggccagcc tgaccataag
    33061 cgcattggtg tcctcttgcg gggtgcggtc gccccgggcg cgcttgccga caaaaatccg
    33121 ttccgcatcg cggcggacga gggacagtat gccgtctgaa accagcgcgt cgtaaagcac
    33181 cacgtctgcc tgctggattt cctgcagccc tttgagcgtc agcagccccg catcgccggg
    33241 acccgcgccg accaaagaca caaaaccgcc ttgataattt tgttccaact gctttgccaa
    33301 ctcctgttcg gcttgggcgg tttgttgatt tttaacgagg gcggcaaaac ggccgttgaa
    33361 ctgcttttcc caaaaacggc ggcgttcggt aacggatttc agtttggctt tgaccgcatc
    33421 gcgccatctt ccggagattt ccgccatatc gcccaaagaa tgaggcagca gggcttccag
    33481 cctttcacgc agcagtcggg cgaggacggg cgcgctgccg gagctggaaa cggcaatctg
    33541 aaccgggttg cggtcgataa ccgacgggaa gatgaagctg caatggtcgc ggtcgtccac
    33601 cacgttgacc ggcttttggc agctttcggc aagatggaaa acgcgccggt tgagggcttg
    33661 gtcgctgctt gccgcaatga tgaggaaaac cgtgcggatg tgttcggcac gaaattcttc
    33721 ggcaagccac aggattttgt tttccgccgc caacgcggag agttcggcat tcaggtgttt
    33781 tgcggcaacc ctgacctctg cgcccgcatt cagcagcagg ctgattttgc gtgcggcgac
    33841 tgcgccgccg cctacgacca atacggggcg gccggcgagg ttggcgaaaa tggggaaata
    33901 attcactggc tgactccttt gctgtttgcc cgcaccttgt ttccgatacg gtgcgtcgcg
    33961 gcatttttgt cggaacgcga gtcattttag acaaaagaat ttccccggtt aaataataaa
    34021 aaggtatttg ttagaagctg aaagctatat gggggcggct gcggatgcgg cggttttccg
    34081 ttttataacg gtttcggaag aaaaacggcc tgaagccgtt tcgggcattc agaccgtttg
    34141 cgtggtgagg ggatgccgtc cgaagggcga aaagggcttc agacggcatt gatgtcgggt
    34201 ttcaggacag gagcaggatg gcggctgcgg caagcgaggc aaccgataat gcggcggcaa
    34261 gcgcggcttt gcctgcaaag cggattgagg ttttgccttc gatgtatttg aagccggtta
    34321 tcatcgggag gatgaggttt ttctttttga atacgcggta tgcggcgacg gcggcgatgt
    34381 ggattgcaga aaaaacggcg agcagcttga aaaagttgag gtggattttc cgcataaggc
    34441 tgcccgtatg ttcggaaacc aaatggttga ggtagccgtt ggtgctgaag gtgttttcat
    34501 cggcggcaaa aagcccggtg ccgacttgga aggacacggc ggccaaaagc gcaacgacca
    34561 tcagtgcgcc caaggggttg tgtccgggct ggatgtgttc gggaataccg tttttcagat
    34621 agccgcgtat gcctgcccag ccttggacga aacgggaaaa acgggcggta tcgctgcccc
    34681 aaatgcccca gcagaggcga aatacgagca ggaaaaggac gaacagcccg acgcgcgtgt
    34741 gccattgcag catatcgccg ccggctttcg cgctatacca cataaagggc agggacgcgg
    34801 caagcagcca gtggaaaagg cgggtgggga ggtcccagac tttggttttg tttttcataa
    34861 tcggtttccg gcggtagaat cggtttgttt tcgagcctta ttttaaccga ttggaggggc
    34921 aatgtttccc gtttttcatc tttcaggcga gagccgccgc cagatgcttc agacggcatt
    34981 gcgttttccc catgttttca aagcccgtgc ggaagattcg cacaaaggga ctttcggcac
    35041 gctcgccgta gtcggcggat cggcagggat gagcggcgcg cccgtattgg cggcatcggc
    35101 ggcaatgtat ctcggctgcg gcaaagtgtg ggcgggtttc aatcaggata cgctaccttt
    35161 tgccgttatt gccggttttc ccgagattat gctggatacg gcggacagtt tggccaaacg
    35221 tcaagatata aacgcctggg ttgtcggttg tggattgggt acaggtaggg cggcggtcgg
    35281 aacgcttgcc ggaattttga cggaacacac ggacaagccc gtcgttttgg atgcggatgc
    35341 gctgaacata ttatcaaccg atgccgaaac ccgaaatctg gcgcgcgggt gtaaaaacct
    35401 gattttaacg ccacaccccg ccgaagccgc gcgcctgctt ggaacgacgg ttgcgcaggt
    35461 tcaggcggat cggacggcgg cagtgaggaa gataggggca attttcggcg caaccgtggt
    35521 tttaaagggg cacaaaacat tggttgcctc acccgatacg gaaatctatg tcaacgaaag
    35581 cggcaacgcg ggattggcaa cggcgggcag tggcgacgta ttgggcggca tcatcggcag
    35641 tctgctcgca cagggcgtgc cggtttttga agccgcctgc gcgggcgcgt ggctgcacgg
    35701 cgcggcggcg gatgtcataa aagaatcggc aggcattgcg gcagggctgt tggcagggga
    35761 aatcgctccg gcggcaaggt ggctgcgcaa ccggataact aaaagtatgt aagaagatat
    35821 agtggattaa caaaaaccag tac
//
LOCUS       DAXHRP010000003        35432 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.003, whole genome shotgun sequence.
ACCESSION   DAXHRP010000003 DAXHRP010000000
VERSION     DAXHRP010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.003"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            94..1059
                     /locus_tag="ACFM72_000091"
     CDS             94..1059
                     /locus_tag="ACFM72_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6256737.1"
                     /translation="MLRLTALTLCTVLALGACSPQNSNSAPQAKEQAVSAAQTEGASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLDEYFKSTKPA
                     GTLFEPDYEALNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKVEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDESIKEGSHGQPVSFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1077..1268
                     /locus_tag="ACFM72_000092"
     CDS             1077..1268
                     /locus_tag="ACFM72_000092"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256738.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFYWNLPHPLPIRRL
                     QTRLSAPTVRTTLFESSTP"
     gene            1287..2255
                     /locus_tag="ACFM72_000093"
     CDS             1287..2255
                     /locus_tag="ACFM72_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC6256739.1"
                     /translation="MTAKPFSLNLTNLLLLAALFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMVGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDILGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            2245..3219
                     /locus_tag="ACFM72_000094"
     CDS             2245..3219
                     /locus_tag="ACFM72_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HFC6256740.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCILFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTLGGV
                     GYASLPLTGKFGFELVVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFASFNTVHNELLGIGALILLISAAAVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLTASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3264..3890
                     /locus_tag="ACFM72_000095"
     CDS             3264..3890
                     /locus_tag="ACFM72_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HFC6256741.1"
                     /translation="MTQEHFPSFFNQAPTITVRDPLAAFLGAAQDGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGGRDEGTTGVTASVVQLLTG
                     AAPETGFGGIGIQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSINAALQPFAPQ
                     MRELMPKAVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3974..4732
                     /locus_tag="ACFM72_000096"
     CDS             3974..4732
                     /locus_tag="ACFM72_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC6256742.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLADTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPSETDKTIVEEALAEFHLQDFADRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTREHKRTTVAVLHDINQAAAYADHVVAMKNGKVALTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
     gene            complement(4791..5129)
                     /locus_tag="ACFM72_000097"
     CDS             complement(4791..5129)
                     /locus_tag="ACFM72_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HFC6256743.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            5224..5436
                     /locus_tag="ACFM72_000098"
     CDS             5224..5436
                     /locus_tag="ACFM72_000098"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256744.1"
                     /translation="MPETVIPAQAGIPISAFQQYLKVSVNPNFHIPNRAETTAFDLKT
                     YGSSCPPLYFLQLSAYPALGKNQKNR"
     gene            5594..9559
                     /gene="purL"
                     /locus_tag="ACFM72_000099"
     CDS             5594..9559
                     /gene="purL"
                     /locus_tag="ACFM72_000099"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HFC6256745.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFVG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKRQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGGKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPAVALFDTPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVKDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNERSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAAEAWPKFKRNLSEQFEARLSMVHVPK
                     SASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQITQTYPLN
                     PNGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKAL
                     G"
     gene            9654..10412
                     /gene="gloB"
                     /locus_tag="ACFM72_000100"
     CDS             9654..10412
                     /gene="gloB"
                     /locus_tag="ACFM72_000100"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HFC6256746.1"
                     /translation="MKITPVKALTDNYIWMIQEGNHAVCVDPSDPTPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGEGLITVW
                     ATPGHTDRHISYLMETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            10719..15194
                     /gene="mspA"
                     /locus_tag="ACFM72_000101"
                     /gene_synonym="ausI"
     CDS             10719..15194
                     /gene="mspA"
                     /locus_tag="ACFM72_000101"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
                     /protein_id="HFC6256747.1"
                     /translation="MRFTHTIPFYSVLSTLGLFAVSPAYSSIVRSDVDYQYFRDFAEN
                     KGAFAVGASNISIQDKQGKILGRVLSGIPMPDFRVSNRQTAIATLVHPQYVNSVKHNV
                     GYGSIQFGNDTQNPEEQAYTYRLVSRNPHPDYDYHLPRLNKLVTEISPAALSSVPLLG
                     NGQPKANAYLDTDRFPYFVRLGSGTQQVRKADGTRTQTAPAYQYLTGGTPLKVLGFQN
                     HGLLVGDSLTDQPLNTYAVAGDSGSPLFAFDKHENRWVLAGVLSTYAGFDSFFNKYIV
                     TQPEFIRSTIRQYETRLDVGLTTNELIWRDNGNGDSTLQGLNERITLPIANPSLAPQN
                     DSRHMPSEDAGKTLILSSRFDNKTLMLADNINQGAGALQFDSNFTVVGKNHTWQGAGV
                     IVADGKRVFWQVSNPKGDRLSKLGAGTLIANGQGINQGDISIGEGTVVLAQKAASDGS
                     KQAFNQVGITSGRGTAVLADSQQIKSENLYFGFRGGRLDLNGNNLAFTHIRHADGGAQ
                     IVNHNPDQAATLTLTGNPVLSPEHVEWVQWGNRPQGNAAVYEYINPHRNRRTDYFILK
                     PGGNPREFFPLNMENSTSWQFIGNNRQQAAKQVAQAENARPDLITFGGYLGENAQTGK
                     AAPSYSKTNIEWVNSPNTPHKPSPYTNTPTRTGAGVPTITASKKAATPAPTSHGMPTA
                     PKTGNFSDITGEAAIEKTRHIANAAVYGRPEYRYNGALNLHYRPKRTDSTLLLNGGMN
                     LNGEVLIEGGNMIVSGRPVPHAYDHQAKREPVLENEWTDGSFKAARFTLRNHARLTAG
                     RNTAHLDGDITAYNLSGIDLGFIQGKTPECYRSYHSGSTHCTPNAVLKAENYRALPAT
                     QVRGDITLNDRSELRLGKAHLYGSIRAGKDTAVRMEADSNWTLSQSSHTGALTLDGAQ
                     ITLNPDFANNTHNNRFNTLTVNGTLDGFGTFRFLTGIVRKQNAPPLKLERDSRGAFQI
                     HVKNTGQEPQTTESLALVSLNPKHSHQARFTLQNGYADLGAYRYILRKNNNGYSLYNP
                     LKEAELQIEATRAEHERNQQAYNQLQATDISRQVQHDSDATRQALQAWQNSQTELARI
                     DSQVQYLSAQLKQTDPLTGILTRAQNLCAAQGYSVDICRQVAKAADTNDLTLFETELD
                     TYIERVEMAESELDKARQGGDAQAVETARHAYLNALNRLSRQIHSLKTGVAGIRMPNL
                     AELISRSANTAVSEQAAYNTGRQQAGRRIDRHLTDPQQQNIWLETGTQQTDYHSGTHR
                     PYQQTTNYAHIGIQTGITDRLSVGTILTDERTNNRFDEGVSARNRSNGAHLFVKGENG
                     ALFAAADLGYSNSRTRFTDYDGAAVRRHAWDAGINTGIKIDTGINLRPYAGIRINRSN
                     GNRYVLDGAEINSPAQIQTTWHAGIRLDKTVELGQAKLTPAFSSDYYHTRQNSGSALS
                     VNDRTLLQQAAHGTLHTLQIDAGYKGWNAKLHAAYGKDSNTARHKQAGIKIGYNW"
     gene            15426..16880
                     /gene="mgtE"
                     /locus_tag="ACFM72_000102"
     CDS             15426..16880
                     /gene="mgtE"
                     /locus_tag="ACFM72_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HFC6256748.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDASLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAINLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(16970..17878)
                     /gene="hslO"
                     /locus_tag="ACFM72_000103"
     CDS             complement(16970..17878)
                     /gene="hslO"
                     /locus_tag="ACFM72_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HFC6256749.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEAVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAREQTRHTVQ"
     gene            18123..18878
                     /locus_tag="ACFM72_000104"
     CDS             18123..18878
                     /locus_tag="ACFM72_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC6256750.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            18897..19115
                     /locus_tag="ACFM72_000105"
     CDS             18897..19115
                     /locus_tag="ACFM72_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256751.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            19260..19604
                     /locus_tag="ACFM72_000106"
     CDS             19260..19604
                     /locus_tag="ACFM72_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HFC6256752.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            19604..20296
                     /locus_tag="ACFM72_000107"
     CDS             19604..20296
                     /locus_tag="ACFM72_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HFC6256753.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            20363..21583
                     /gene="argJ"
                     /locus_tag="ACFM72_000108"
     CDS             20363..21583
                     /gene="argJ"
                     /locus_tag="ACFM72_000108"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HFC6256754.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVVD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQSAATVYTCD
                     LSHGYVSINADYRS"
     gene            21643..23052
                     /locus_tag="ACFM72_000109"
     CDS             21643..23052
                     /locus_tag="ACFM72_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFC6256755.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGVSIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGIPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NASARPQTANSKTGMPSEN"
     gene            23241..24632
                     /gene="hrpA"
                     /locus_tag="ACFM72_000110"
     CDS             23241..24632
                     /gene="hrpA"
                     /locus_tag="ACFM72_000110"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HFC6256756.1"
                     /translation="MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKIEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLEEIKKAIAKNQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIRETAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMAALKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAV"
     gene            24776..26419
                     /locus_tag="ACFM72_000111"
     CDS             24776..26419
                     /locus_tag="ACFM72_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HFC6256757.1"
                     /translation="MDEIQIPKKVELQTKLENEKIVLSKGSTTIIVGANGTGKTRLAV
                     YIEEQLKEKAHRISAHRALKLNPNVNKIPEKSAKTYLSYGQNWDGIDVSNRKNYRWDN
                     NSYTHLLNDFDWLLQYLFAQQNNIAVANNQKLNRNEKVTNSKTKLDILQEAWETLLPH
                     RKLHITADDIQVSAVDNEELYSASNMSDGERALFYILGQVLSVDDGSVLIFDEPELHI
                     HKSIISNLWDKIEELRPDCSFLIITHDIEFAATRVAKKYVIRNYYPTPAWDISEVPES
                     NFDEETITMILGSRKPILFVEGNNNSLDIATYRYCYPDWTIIPKGACKDVIQSVSSLK
                     KLSNEMPLLNLKCSGIVDLDSRDEREIEQLNNLGIYILPVSEIENLFSLTDVAKEILK
                     LNQYSDEELLNKLNGFKSELIKYIDNELKDDKLDEFVVKQVRRKIDNYLKNIDLSSKI
                     TSTDMKKSLLNEISTLTEQKIETWISEIKNEIQRCIEQQDLDKLLTIYDNKGLLAKSA
                     CVLKGMRNKHEFESWIMRTLKGRNKDFIDAIRQKLPILD"
     gene            26463..26645
                     /locus_tag="ACFM72_000112"
     CDS             26463..26645
                     /locus_tag="ACFM72_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256758.1"
                     /translation="MKNHQTTLSFPTSSSLKPCADKQGLSEDRSQYRLTKLGEQMAHL
                     PIDPKIARILLVLFRF"
     gene            26857..28434
                     /gene="lpt3"
                     /locus_tag="ACFM72_000113"
     CDS             26857..28434
                     /gene="lpt3"
                     /locus_tag="ACFM72_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HFC6256759.1"
                     /translation="MMKKSFLTLVLYSSLLTASEIAYRFVFGIETLPAAKIAETFALT
                     FVIAALYLFARYKVTRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPVLWGVLEVMLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSRIPAFKQPAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNAIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENEMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGKHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            28536..29714
                     /locus_tag="ACFM72_000114"
                     /pseudo
     CDS             28536..29714
                     /locus_tag="ACFM72_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240826.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
     gene            29715..31919
                     /locus_tag="ACFM72_000115"
     CDS             29715..31919
                     /locus_tag="ACFM72_000115"
                     /inference="COORDINATES: protein motif:HMM:NF023326.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HFC6256760.1"
                     /translation="MAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGS
                     RQNENHGNTVGWVENPTSAATAKTVGFDNPTYAAQQTTPSPVGEGRGEGKTVAAQTNF
                     SATAANPLPNPLPQEREQSAAASTISDDLRPANLQQTAPSPVGEGWGEGKTVATQTNF
                     SATSTNPLPQEREQSASASTFSDDLRPANLQQPSPSPVGEGWGEGKTVATQTNFSATS
                     TLSDDSKPKKQPAPQKNRLKPLPLADIRTFQAWLKTAERDNPRLLFLSRDDLMQHAAA
                     HITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMI
                     REKIQLQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRIF
                     EQINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQE
                     FERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTTEAAEQAHRQ
                     GVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDEL
                     PRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAVYAELNSKLGKHPLTHLLRLRLQT
                     LLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTD
                     SLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIEK"
     gene            complement(31952..33043)
                     /locus_tag="ACFM72_000116"
     CDS             complement(31952..33043)
                     /locus_tag="ACFM72_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC6256761.1"
                     /translation="MQTFNRERLEFALDKRGCTQTKLAELLGITARQVRNYVKDEQIP
                     DLNELANLLEFPVHFFTNDERLPELKSQAVSFRARSRTSKRLEKQALNHSITAFLLND
                     WLETEFTLSQAVLPDFSDISPEEAAQELRLEWGLGNEPIPNMITLLEAKGVRVFSLSL
                     DTKDIDAFCTWYENHPFVFLNTQKSAERSRFDAAHELGHLIRDKYSMEHSKNSEITED
                     EPRDIIEKEANAFASAFLMPEAALRLYRHVPITIENLLKIKRRFGVSLVALAYRMHKL
                     GMITDRMYIHNLCPLFAKKKYRTIEPEPMEREISSALRKMLTILKNDGIGIEQIAENL
                     NVSPKDVADLTFGLVERDLNRYRKLRLVK"
     gene            complement(33059..33703)
                     /locus_tag="ACFM72_000117"
     CDS             complement(33059..33703)
                     /locus_tag="ACFM72_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256762.1"
                     /translation="MVEFALSEPFPFEVGEIVEQQNSDIALSEISKYLSQEMLKEIVL
                     TAHNNIQDKAALSDRNTLGMYRQAEITFALRVYLSKDGWTLEPWSGGAFLCLSPCRTK
                     SIIVATATSDVGRHHGMPMTTARKGKGFEEAIRNSKLDLPDTVQFWVLLFHWKYNKVQ
                     LELSLPSGFVSHQITGYKQRIILADVDLTKFDELERKQPVEEYEPLVERKQKAG"
     gene            34060..34212
                     /locus_tag="ACFM72_000118"
     CDS             34060..34212
                     /locus_tag="ACFM72_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256763.1"
                     /translation="MSGIYLPRLFPPHIAERGLLYFQQGKVLDVRKTSAGHYRTEVCG
                     SENYWV"
     gene            34469..34737
                     /locus_tag="ACFM72_000119"
                     /pseudo
     CDS             34469..34737
                     /locus_tag="ACFM72_000119"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
     gene            complement(34827..35276)
                     /locus_tag="ACFM72_000120"
     CDS             complement(34827..35276)
                     /locus_tag="ACFM72_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC6256764.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
     gene            complement(35364..>35432)
                     /locus_tag="ACFM72_000121"
     CDS             complement(35364..>35432)
                     /locus_tag="ACFM72_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HFC6256765.1"
                     /translation="QASVGAPAPKGPAKPAIPAAKK"
BASE COUNT         9034 a        10268 c         8450 g         7680 t
ORIGIN      
        1 atccactata gattatcatt tatcctttct aaagccgttc cggtttgtcc gactggcggc
       61 tttgccccaa tatccccatt ttggagacac cctatgttgc gtttgaccgc attgaccctc
      121 tgcaccgtcc tcgccttggg cgcgtgttcg ccgcaaaatt ccaactctgc cccacaagcc
      181 aaagaacagg cggtttccgc cgcacaaacc gaaggcgcgt ccgttaccgt caaaaccgcg
      241 cgcggcgacg ttcaaatacc gcaaaacccc gaacgcatcg ccgtttacga tttgggtatg
      301 ctcgacacct tgagcaaact gggtgtgaaa accggtttgt ccgtcgataa aaaccgcctg
      361 ccctacttgg acgaatattt caaatccacg aaacctgccg gaactttgtt cgagccggat
      421 tacgaagcac tcaacgccta caagccgcag ctcatcatca tcggcagccg cgccgccaaa
      481 gcgtttgaca aattgaacga aatcgcgccg accatcgaaa tgaccgccga taccgccaat
      541 ctgaaagaaa gtgccaaaga gcgcatcgac gcgctggcgc aaatcttcgg caaacaggcg
      601 gaagccgaca agctgaaggt ggaaatcgac gcgtcttttg aagccgcgaa aactgccgcg
      661 caaggcaaag gcaaaggttt ggtgattttg gtcaacggtg ggaaaatgtc cgccttcggc
      721 ccgtcttcac gcttgggcgg ctggctgcac aaagacatcg gcgttcccgc tgtcgatgaa
      781 tcgattaaag aaggcagcca cggccagccc gtcagctttg aatacctgaa agagaaaaat
      841 cccgactggc tgtttgtttt agaccgcagc gcggccatcg gcgaagaggg tcaggcggcg
      901 aaagacgtgt tggataatcc gctggttgcc gaaacaaccg cttggaaaaa aggacaagtc
      961 gtttacctcg ttcccgaaac ttatttggca gccggtggcg cgcaagagct gctgaatgca
     1021 agcaaacagg ttgcggatgc gttcaacgcg gcaaaataat gaaacggcgg cattcgatgc
     1081 cgtctgaaac acggatgcaa accgcttcct gtgtttcaga cggcattgcc cgatacgggc
     1141 gttatcgcgg gaatggcggc aagcgttttt attggaactt gccccatcct ttgcccatac
     1201 ggaggcttca aacaaggctt tccgctccga cggttcggac taccttgttt gaatcttcta
     1261 cgccttaacg cttttccctt ctgtttatga ctgccaaacc tttttccctc aacctgacca
     1321 acctcctgct gctggcggcg ttgtttgccg tcagcctgtc ggtgggcgtt gccgatttcc
     1381 gctggtcgga tgtgttttcg ctgtccgaca gccagcaggt tatgttcatc agccgcctgc
     1441 cgcgcacgtt tgcgattgtg ctgacgggtg cgtcgatggc ggtggcgggg atgattatgc
     1501 agattctgat gcgcaaccgt tttgtcgaac cgtcgatggt gggcgcgggt cagagtgcgg
     1561 ctttgggttt gcttctgatg tccctgctgc tgcctgccgc gccgctgccg gtcaaaatgt
     1621 cggttgccgc cgttgccgcg ttaatcggga tgctggtgtt tatgatgctt atccgccgtc
     1681 tgccgccgac cgcgcaactg atggtgccgc tggtcgggat tattttcggc ggcgtggttg
     1741 aggcggtggc gacctttatc gcgtatgaaa acgaaatgct gcaaatgctc ggcgtgtggc
     1801 agcagggcga tttttcgagc gtgctgctgg ggcggtacga gctgctttgg attacgggcg
     1861 gtttggcggt gtttgcctat ctgattgccg accggctgac gattttgggg ctgggcgaga
     1921 cggtcagcgt gaatttgggt ttgaaccgga cggcggtgtt gtggtcgggg ctgattattg
     1981 tggctttgat tacgtcgctg gttatcgtta cggtcggcaa tattccgttt gtcgggctgg
     2041 tcgtgccgaa catcatcagc cgcctgatag gcgacaggct gcgccaaagc ctgcctgcgg
     2101 tggccttgtt gggcgcgtct ttggtgttgc tgtgcgatat tttgggacgc gtgattgtgt
     2161 ttccgtttga aattccggtc tctacggttt ttggtgtgtt gggtacggct ttgtttttgt
     2221 ggcttttgtt aaggaaacct gctcatgccg tctgaaaaaa atatcggttt tatggcagga
     2281 agcagccgtc cgttgtgggt tgcctttgcg ctgttgctgg tttcctgcat cctgtttatg
     2341 acgctcaacg tcaaaggcga ttgggacttt gtactgcacc tgcgtctgac caaacttgcc
     2401 gcgctgctga tggtcgccta tgcggtcggc gtgtccacgc aactcttcca aacgctgacc
     2461 aacaatccga ttctgacccc ttcgattttg ggtttcgatt cgctgtatgt gtttttgcag
     2521 accttgctgg tgtttacgct cggcggcgtg ggctatgctt ccctgccgtt gacgggcaaa
     2581 ttcggctttg aactggtcgt tatgatgggc ggctcgctgc tgttgttcta cacgctcatc
     2641 cgtcagggcg ggcgcgattt gccgcgtatg attttaatcg gcgtgatttt cgggattttg
     2701 ttccgcagcc tgtcgtcgct gctttcgcgc atgatcgatc ccgaagaatt taccgccgcg
     2761 caggcgaata tgtttgccag tttcaatacc gtccacaacg aactgttggg gataggcgcg
     2821 ctgattctgc tcatcagcgc ggcggcggtt tggcgcgaac gctaccgctt ggacgtacac
     2881 cttttggggc gcgaccaagc cgtcaatttg ggcatcagct acacgcgcaa caccttatgg
     2941 atactgcttt ggattgccgc gctggtggcg acggcgaccg ccgtggtcgg cccggtgagc
     3001 tttttcgggc ttctcaccgc ctcgcttgcc aaccactttt ccccgtccgt gcgccattcc
     3061 gtccgcctgc cgatgacggt ttgtgtcggc ggtatcctcc tggtcggcgg acaaaccgta
     3121 ttcgaacact tcttgggcat gaaggcggta ttaagcgtgg tggtcgaatt tgcgggcgga
     3181 ctcgttttcc tctatctcgt tttaaaacac aaaaaatgac ggatgccgtc tgaacggccg
     3241 cccgcctcga aaggacaaac catatgacac aagaacattt cccatcattc ttcaaccaag
     3301 ccccgaccat caccgttaga gacccgcttg ccgcattcct cggcgcggcg caagacggca
     3361 tcctcactta ccgctacgcc gatgccgtgc gcctgtgcgg acattcctgc ccgaccgtcg
     3421 cgggcgcgta cctgatggtt atcaaaggtc tgaaagccct ttacggcgaa gagctgcccg
     3481 aacgcggcgg catcgaagcc gccatgcagg gcgggcgaga cgaaggcacg accggtgtta
     3541 ccgcttccgt cgtccaactc ctcaccggcg cagccccgga aaccggcttc ggaggcatcg
     3601 gaatacaggg acgcttcgcc cgccgcaacc tcttatcctt tggtgcaggc gaaattaacg
     3661 gcacactgac cctgcgccgc aaagacaacg gcaaaaccgt cgccgtcagc atcaacgccg
     3721 cgctccaacc ctttgcacca caaatgcgcg aacttatgcc caaagccgtc ggcggcagcg
     3781 caagcgcaga agaactcgaa cgcttcggac aactctggca ggcacgcgtt aaagcatttt
     3841 tgaccgaatc ggcggacgac ccgcagttcg tcatcgtccg cgaagtgtga gcgttcagac
     3901 ggcattccga atttcaaatg ccgtccgaac ccccgccaaa caacaacaaa cctacgcccg
     3961 acaagcatcc gccatgatta ccatccgcaa cgtcagctac cgcatcggca cacgccccat
     4021 cctcgacaac gtcagcctcg acatccccga aggcggcatt accgccctcg tcggccccaa
     4081 cggcgcgggc aaatccaccc tgttttcctt tatggcgcgg ctgcgcccgc ttgaaagcgg
     4141 cagcatcgcc taccgcggca aaaaccttgc cgacaccccc accgccgaac tcgcccgcac
     4201 gctctccatc ctcacccaag aaaacagcat catgagccgc attaccgtgc gcgacctgct
     4261 catgttcggc cgctatccct accatcaagg caggccgtct gaaacggata aaaccatcgt
     4321 cgaagaagcg ctcgccgagt tccacctgca agactttgcc gaccgctacc tgaccgagct
     4381 ctccggcggc caacgccaac gcgccatgat tgcgatggtg ttctgccaaa gcaccgacta
     4441 cgtccttttg gacgaaccgc tgaacaacct cgatatgtat cacgcccgct cgctcatgca
     4501 gattctgcaa aagctcacgc gcgaacacaa acgcaccacc gtcgccgtat tgcacgacat
     4561 taaccaggcc gccgcttacg ccgaccacgt cgtcgccatg aaaaacggca aagtcgccct
     4621 gaccggcacg cccgaagaag tgttcaccgt acacaacatc aaagaactgt tcgacatgga
     4681 cgtggacgta ctcgactacg aaggcaaaaa actcatcgtc caccatatct gaagctcaaa
     4741 aagaaaatgc cgtctgaaaa cctttcagac ggcatttcca ttccaaacgc tcaaaccgcc
     4801 gcgtccgaac gttcgcccgt gcggatacgg attgcctcct cgaccggcag cacaaaaatc
     4861 ttgccgtcgc cgatttttcc cgaacgcgcc acctcgacaa tcacgtcaat cgcgcgttcc
     4921 acagcatcat ccgccaacac cagctcgatt ttgaccttgg gcaggaaatc gacagcgtat
     4981 tccgcgcccc ggtaaatctc cgtatgcccc ttctgcctgc cgaacccttt gacctcgctg
     5041 acggtcatac ccgtaatgcc gatttccgtc aacgcctcgc gcacgtcgtc gagtttgaac
     5101 ggtttgacaa tcgcctcgat ttttttcatc acattctcca ttaattaacg taaacacacg
     5161 acaaatatag cagaaaccgc cggcaaacga taaacggtac tgttcgcccg gcgatgcggc
     5221 gatttgccgg aaaccgtcat tcccgcgcag gcgggaatcc cgatctctgc atttcagcaa
     5281 tatttaaagg tttctgtaaa tccaaacttc catattccta accgtgcgga aacgacggca
     5341 tttgatctaa aaacatacgg aagcagttgc ccgcccctct acttcctgca attatccgca
     5401 tacccggctt tgggtaaaaa tcagaaaaac agataaaacc cttattcctt aatatcttca
     5461 gacggcacct gtattttccc caactgtatg ccgtctgaag attgtcaaca ttttaagcca
     5521 aaatatccaa gcaatacaaa cctgtccggc gtataatccc tctttttccc aaccgcattt
     5581 gagagccgaa tccatgtctg tcgttttgcc cttgcgcggc gttaccgccc tttccgattt
     5641 ccgtgtcgaa aaactcttgc aaaaagccgc cgcactcggt ctgcccgaag tcaaattaag
     5701 cagcgaattt tggtatttcg tcggcagcga gaaagcattg gatgccgcga ctgtcgaaaa
     5761 actgcaagcc ttgttggcgg cgcaaagcgt tgaacaaacg ccaaaagcgc gcgagggctt
     5821 gcatttgttt ttggtcacgc cccgtttggg tacgatttcg ccgtgggctt ccaaggcgac
     5881 caatatcgcg gaaaactgcg gtttggcagg catcgagcgc atcgagcgcg gcatggcggt
     5941 gtggctggaa ggtgcgctta ccgatgaaca gaaacggcaa tgggcggcgt tgctgcacga
     6001 ccgcatgacc gaatcggtgc tgcccgattt tcagacggca tccaaattat tccaccatct
     6061 cgaatccgaa accttttcca ccgttgatgt tttaggcggc ggtaaagagg ctttggtcaa
     6121 agccaatacc gaaatgggtt tggcactctc cgccgacgaa atcgattatc tggttgaaaa
     6181 ctatcaggct ttgcagcgca atccgtccga tgtggaactg atgatgttcg cgcaggcaaa
     6241 cagcgaacac tgccgccaca aaatcttcaa cgccgatttc atcctcaacg gcgaaaaaca
     6301 accgaaatcc ctgttcggca tgatacgcga cacgcacaac gcgcatcccg aaggtacggt
     6361 cgtcgcctat aaagacaatt cgtccgtgat cgaaggcgcg aaaatcgagc gtttctatcc
     6421 gaatgcggcg gaaaaccaag gttaccgttt ccacgaagaa gacacgcata tcatcatgaa
     6481 agtggaaacg cacaaccacc cgaccgccat cgcgccgttt gcgggcgcgg caacaggcgc
     6541 gggcggcgaa atccgcgacg aaggcgcgac gggcaaaggt tcgcgtccga aagcaggctt
     6601 gaccggcttt accgtctcca acctcaacat ccccgacctc aaacagccgt gggaacaaga
     6661 ctacggcaag ccggaacaca tttcctcgcc gttggacatt atgattgaag gccccatcgg
     6721 cggcgcggcg ttcaacaacg aattcggccg ccccaacctc ttgggctact tccgcacttt
     6781 tgaagagaag tttgacggtc aggttcgcgg ctatcacaaa ccgattatga ttgccggcgg
     6841 cttgggcagc attcaggcgc agcagacgca taaagacgaa atccccgaag gcgcattgct
     6901 gattcaactg ggcggcccgg gcatgcttat cggcttgggc ggcggcgcgg cttcttcgat
     6961 ggataccggc acgaacgacg cgtctttaga cttcaattcc gtacaacgcg gcaaccccga
     7021 aatcgaacgc cgcgcgcagg aagtcatcga ccgctgctgg cagctcggcg gcaaaaaccc
     7081 gattatctcc atccacgacg tgggcgcggg cggtttgtcc aacgccttcc ccgaactcgt
     7141 caacgatgcc ggacgcggcg cggtattcaa gctgcgcgaa gtgccgttgg aagaacacgg
     7201 tttaacgcct ttgcaaatct ggtgtaacga atcgcaagag cgttatgtgt tgtcgatttt
     7261 ggaaaaagat ttggacacct tccgcgccat ctgcgaacgc gaacgctgcc cgtttgccgt
     7321 ggtcggcacg gcgaccgacg acggccattt gaaagtgcgc gacgatttgt tcgccaacaa
     7381 ccccgtcgat ttgccgctga acgtcttgct cggcaaaccg cccaaaacca cgcgtaccga
     7441 caaaacggtt acgccgtcca aaaaaccgtt tcacgccgac gatatcgaca tcaccgaagc
     7501 cgcctaccgc gttttgcgcc tgcctgccgt agccgccaaa aacttcctga ttaccatcgg
     7561 cgaccgcagc gtcggcggca tgacccaccg cgaccaaatg gtcggcaaat accaaacccc
     7621 cgtagccgac tgcgccgtga ccatgatggg cttcaacacc tatcgcggcg aagcgatgag
     7681 catgggcgaa aaaccggccg tcgccctgtt tgacacgcct gcctcgggca gaatgtgcgt
     7741 cggcgaagcc atcaccaaca tcgcggcggt caacatcggc gacatcggca atatcaaact
     7801 ctccgccaac tggatggcgg cgtgcggcaa cgaaggcgaa gacgaaaaac tctaccgcac
     7861 cgtcgaagcg gtttccaaag cctgtcaggc attggatttg agcattcccg tgggcaaaga
     7921 cagcctgtcg atgaaaaccg tatggcagga tggcgaagag aaaaaatccg tcgtttcgcc
     7981 gttaagcctg attatctccg cgttcgcgcc ggtcaaagac gtgcgcaaaa ccgttacgcc
     8041 cgaattgaaa aacgtcgaag acagcgtatt gttatttatc gatttgggct tcggcaaagc
     8101 gcgtatgggc ggctcggcgt ttggtcaggt gtacaacaat atgagcggcg acgcgcccga
     8161 tttggacgat acaagtcgtc tgaaagcgtt ttacaacgtg attcaacagc ttgtcgccga
     8221 agacaaactc ttggcatacc acgaccgcag cgacggcggt ttgtttgccg ttttggtaga
     8281 aatggcgttt gcggggcggt gcggcttgga tatagattta aatttattgc ttgcacaaac
     8341 atttattacc aaccataccg ctctgtctca atcattgcgg actgaagagg taaaagcgtt
     8401 ggctgaatgg caagaaacca ttgcccgcac attatttaat gaagagttgg gtgctgttat
     8461 ccaagttaga aaacaagatg ttgccgatat tatcaattta ttctatcaac aacagctgca
     8521 tcataatgtc tttgaaatcg gtacgttaac tgatgagaac acgttaatca tccgcgacgg
     8581 gcaaacgcac cttatttctg acaacctaat caaactgcaa caaacctggc aagaaaccag
     8641 ccatcaaatc caacgcttgc gcgacaatcc tgcctgcgcc gacagcgagt tcgcactgat
     8701 tggcgacaac gaacgcagcg cattgtttgc caacctgaaa ttcgacgtga acgaagacat
     8761 cgccgcgccg tttatcaaca gcggcgcgaa acccaaaatc gccatcctgc gcgaacaggg
     8821 cgtgaacggg caaatcgaaa tggccgccgc gttcacccgt gccggattcg atgcctacga
     8881 cgtgcatatg tccgacctga tggcaggccg cttccgcctt gccgacttca aaatgctggc
     8941 ggcgtgcggc ggcttcagct acggcgacgt actcggcgcg ggcgaaggct gggcgaaatc
     9001 catcctgttc caccctgctc tgcgcgacca gtttgccgca ttcttcgccg acccggacac
     9061 gctgacattg ggcgtgtgca acggctgcca aatggtcagc aacctcgccg agattatccc
     9121 gggtgcagca gaggcatggc ctaaattcaa acgcaacctg agcgaacagt ttgaagcacg
     9181 cctgagcatg gttcatgttc cgaaatccgc atcactgatt ctgaatgaaa tgcaaggctc
     9241 cagcctgcct gtcgtggtca gccacggcga aggccgcgcc gacttcgcgc ttcacggcgg
     9301 caacatttct gccgatttgg gcattgcgtt gcaatatgtg gacggacaaa accaaattac
     9361 ccaaacctac ccgctcaacc ccaacggctc gccgcaaggc atcgccggcg tgaccaacgc
     9421 cgacggccgc gttaccatca tgatgccgca tcctgaacgt gtataccgcg ccgcacaaat
     9481 gagctggaaa ccggaagact ggacggaatt gtccggctgg taccgcctct tcgccggcgc
     9541 acgtaaagcc ttgggctaac cgccctactc aaaccaatgc cgtctgaaga atatttcaga
     9601 cggcgttccg gcataccatc ctttaaacgg tatccgtcca cctaggaaca ctcatgaaaa
     9661 tcacacccgt caaagccttg accgacaact acatctggat gatacaggaa ggcaaccatg
     9721 ccgtctgcgt cgacccctcc gaccccacac ccgtattgga attcctcgtc cgcaaccgac
     9781 tcatgcttgc ccaaacatgg gtaactcacc cccaccccga ccacgaaggc ggtgcggcgg
     9841 cactctggcg cggctacatg gaatcgcccg tttacggcga atccgacatc gaagcggcaa
     9901 cccacaccgt aaccgcaggc acccaattta ccttcggcga agggttaatc accgtttggg
     9961 caaccccggg ccataccgac cgccacatca gctaccttat ggaaacttca gacggcatac
    10021 acgtcttttg cggcgacacc cttttttccg ccggctgcgg acgcgtgttt accggcacaa
    10081 tcgaacagct ttacgacagc ttccaacgct tcaaccgcct gcctgaaaac accctgttct
    10141 atccggcgca cgaatacacc gccgccaacc tggattttgc cgcccatatc gagccggaca
    10201 acgccgacat tcagacggca ctgaaagcgg cggcgcatac gcctaccctg cccgttaccc
    10261 tcgcgcacga acgccgtgtc aatccgtttt tgcgcgtcga cctgccgcac gtcagagacc
    10321 gcgccgaggc attgagcggg aaaacgttaa acagcagcct cgataccttt gtcgcgctgc
    10381 gtgaacttaa aaaccaatac cggacgaaat aaaacaacgg gaaaacgcag ccattcctag
    10441 gatttttatt aaaatcttaa ataaaatcat acaatcatcg ccaatagacg aaaggacacc
    10501 gttgccttat aatcaaacaa aaacaaaata tataatatag tggattgaat ttaaatcagg
    10561 acaaggcgac gaagccgcag acaatacaga tagtacggca aggcgaggca acgctgtact
    10621 ggtttttgtt aatccactat ataaatccag cacaaaacgg gatcggtgat tcttgtccgc
    10681 aagaatcgtt gattttctct attacacgga taatcatcat gcgcttcaca cataccatcc
    10741 cattttattc cgtattgtcc accctcggtc tttttgccgt ttcccctgct tactcatcca
    10801 ttgtccgcag cgatgtcgat taccaatatt ttcgcgactt tgccgaaaat aaaggcgcgt
    10861 tcgccgtagg tgcaagcaat atttccatcc aagacaagca aggcaaaata ttaggcaggg
    10921 ttctcagcgg catccccatg cccgacttcc gcgtcagcaa ccggcaaacc gctatcgcca
    10981 ccctggttca cccccaatac gtcaacagtg tcaaacacaa cgtcggctac ggttccatac
    11041 aattcggcaa cgacacccaa aaccctgaag aacaagccta tacctaccgc ctcgtatcac
    11101 gcaacccgca cccggactac gactaccacc ttccccgcct caacaaactg gttaccgaaa
    11161 tctcacctgc cgcactcagc agcgtaccct tgcttggaaa cggccagcca aaggccaatg
    11221 cctacctcga taccgaccgc ttcccatact ttgtacgact cggctcaggc acgcaacaag
    11281 tccgcaaagc agacggcacg cgcacacaaa ccgccccggc ataccaatac ctgaccggcg
    11341 gcacgccgct gaaagtattg ggtttccaaa accacggctt actcgtcggc gacagcctga
    11401 ccgaccaacc ccttaacacc tacgcagtcg ccggagacag cggttccccc ctgttcgcct
    11461 tcgacaagca tgaaaaccgc tgggtgcttg cgggcgtact cagcacctac gccggcttcg
    11521 acagcttctt caacaaatac atcgtcacgc aacccgaatt catccgttcc accatccgcc
    11581 aatacgaaac ccggctggat gtcgggctga ccaccaacga actcatatgg cgcgacaacg
    11641 gtaatggcga cagcaccctg caagggctca acgaacgcat caccctgccc attgcaaacc
    11701 cttcgcttgc cccacaaaac gacagcaggc acatgccgtc tgaagatgcc ggcaaaacgc
    11761 tcatcctatc cagcaggttc gacaacaaaa cactgatgct ggcagacaat atcaaccaag
    11821 gcgcaggcgc attgcagttc gacagcaact tcaccgtcgt cggtaaaaac cacacatggc
    11881 aaggtgcagg cgttatcgta gccgacggca aacgcgtctt ctggcaagtc agcaacccca
    11941 aaggcgaccg gctctccaaa ctgggcgcag gcacgcttat cgccaacgga caaggcatca
    12001 accagggcga catcagcatc ggggaaggca ctgtcgtact cgcccaaaaa gctgcttcag
    12061 acggcagcaa acaagcattc aaccaagtcg gcatcaccag cggcaggggc acggccgtcc
    12121 tcgccgacag ccagcaaatc aaatccgaaa acctctattt cggcttcagg ggcggacggc
    12181 tcgacctcaa cggcaacaac cttgccttta cccatatccg ccatgcggac ggcggcgcgc
    12241 aaatcgtcaa tcacaaccct gaccaagccg cgacactgac gctgaccggc aaccccgtcc
    12301 tcagtcccga gcatgtcgag tgggtgcaat ggggcaaccg tccgcaaggc aacgcggcgg
    12361 tttacgaata catcaacccg caccgcaacc gtcggaccga ctacttcata ctcaaacccg
    12421 gcggcaaccc gcgcgaattt ttcccgttaa atatggaaaa ctcaacaagc tggcaattta
    12481 tcggcaacaa caggcaacag gccgccaaac aagtcgccca agccgaaaat gcccgccccg
    12541 acctgattac cttcggcgga tacttgggtg agaacgcgca aacgggtaaa gccgcaccga
    12601 gttacagcaa aaccaatatc gaatgggtga atagtccaaa caccccacac aagccctcgc
    12661 cctatacgaa tacgccaacc cgcacagggg caggcgtacc gacgattacc gcctcaaaga
    12721 aggcggcaac cccagcgcct acttcccatg ggatgcctac agcacccaag actgggaatt
    12781 tctcggacat aaccggcgaa gcagccatag aaaaaacccg ccatatcgca aatgccgccg
    12841 tatacggccg gcccgaatac cgttacaacg gcgcactcaa cctgcactat cgtcccaaac
    12901 gcaccgacag cacgctgttg ctcaacggcg gcatgaacct taacggggaa gtcttgattg
    12961 agggcggcaa tatgattgtg tcaggcaggc ccgtacccca tgcctacgac caccaggcca
    13021 aacgcgaacc cgttcttgaa aacgaatgga ccgacggcag cttcaaggct gcacggttca
    13081 ccctgcgaaa ccatgcccga ctgacggcag ggcgcaatac cgcgcatctg gacggcgaca
    13141 taaccgcata caatctgtcc ggcatcgacc tcggctttat ccaaggcaaa acaccggaat
    13201 gctaccgctc ctaccatagc ggcagcaccc actgcacacc caacgccgtt ttaaaagccg
    13261 aaaactatcg tgcactacct gcaacgcaag tacgcggcga cattaccctt aacgaccgtt
    13321 cagagctccg cctgggcaaa gcacacctgt acggcagcat ccgtgccggc aaagacaccg
    13381 cagtccgcat ggaagcagac agcaactgga cactttccca gtccagccac accggcgcac
    13441 tgacgcttga cggcgcacaa attaccctga accccgattt cgccaataat acacacaaca
    13501 accgcttcaa cacactgacc gtcaacggca cacttgacgg gttcggcaca ttccgattcc
    13561 tgaccggcat cgtccgaaaa caaaatgccc cccccctcaa actggaaagg gacagccgcg
    13621 gcgcattcca aatccacgtc aaaaacaccg gacaagaacc tcaaacaacc gaatcgcttg
    13681 cacttgtgag cctcaatccg aaacacagcc accaagcccg attcaccctc caaaacggct
    13741 atgccgattt gggtgcctac cgctacatcc tccgcaaaaa caacaacgga tacagcctgt
    13801 acaacccgct caaagaggcc gaacttcaaa ttgaagccac gcgtgcggaa catgagcgca
    13861 accaacaggc atacaaccaa ttacaggcaa ccgacatcag cagacaggtt caacatgact
    13921 ctgacgcgac caggcaggca ctacaggcct ggcagaacag tcaaaccgaa cttgcccgca
    13981 tcgacagcca agtccaatat ctgtccgccc aattgaaaca gacagacccg ctaaccggca
    14041 ttctgacgcg tgcccaaaac ctgtgtgccg cacaaggata cagtgtcgat atctgccgtc
    14101 aggttgccaa agccgccgac acgaacgacc tgacactctt cgaaaccgaa ctggatacgt
    14161 atatagaacg tgtagaaatg gccgaatccg aacttgacaa agcacggcaa ggcggcgatg
    14221 cgcaagccgt cgaaacagcc cggcacgcct acctgaacgc actcaaccgt ctgtcccgac
    14281 aaatccacag tttgaaaacc ggcgttgccg gcatccgtat gccgaacctg gccgaactga
    14341 tcagccggtc ggccaacacc gccgtttccg aacaggccgc ctacaatacc ggccggcaac
    14401 aggcgggacg ccgcatcgac cgccacctta ccgatccgca gcagcaaaac atctggctgg
    14461 aaaccggtac gcaacaaacc gactaccata gcggcacaca ccgtccctac caacaaacta
    14521 ccaactatgc acatatcggc atccaaaccg gcatcaccga ccgtctcagt gtcggtacga
    14581 ttttaaccga tgagcgcaca aacaaccgtt ttgatgaagg cgtatccgcc cgaaaccgca
    14641 gcaacggcgc acatctgttc gtcaaagggg aaaacggcgc actctttgcc gcggcagatt
    14701 taggctacag caacagccgt acccgattta ccgattatga cggggctgcc gtccgccgcc
    14761 acgcatggga tgcaggcatc aacaccggca tcaaaatcga taccggcatc aacctcagac
    14821 cctatgccgg catccgtata aaccgcagca acggcaaccg gtacgtactc gacggcgcag
    14881 agataaacag cccggcgcaa atccaaacca catggcatgc cggcatccgt ctcgataaaa
    14941 ccgtcgaact gggtcaagcc aagctgaccc ccgctttcag cagcgattac taccataccc
    15001 gccaaaacag cggttccgcc ctcagcgtca acgaccgtac cttactgcag caagccgccc
    15061 acggcacact gcataccctg caaatcgacg ccggatacaa aggctggaac gccaaacttc
    15121 atgccgctta cggcaaagac agcaacaccg cccgccacaa acaggcagga atcaaaatag
    15181 gctacaactg gtaacaagcc gataaaaatg ccgtctggaa cccgcgtttc agacggcatt
    15241 tgcgttaaaa atagtaaacc gttccaaaag ggagtagaat agtgccgttt ccaaccctgc
    15301 gcctgtaccg tcaggctttt attatggacc ttcccagttc gtttttactg aacgcccctt
    15361 ccgattccaa acgacaataa ccatcccgcc ggaatgcctc cccgcacacg gcgggcggag
    15421 catttatgag catcgaacca acccctccga accttgaaaa cgacggtatc gaaaacgatg
    15481 tagaacgcgt ttccgccgat ttcgaccgtg tccactccct ctgcgaaatc ctcgaacctg
    15541 cttttgaaca aatcgaaaac ggcacaccgc tcgaagacgc gtcgctgcgc gacaagctga
    15601 ccgagctgac cgtcctcttg agcgagctgc accctgccga cgtggcggcg gtattggaat
    15661 cgctgccgcc gcgcgaacgc aatatcgtct ggattctggt caaaccggaa gacgacggcg
    15721 aagtcttgct ggaagtgtcc gacgcggtgc gcgaaacgct gatcgagtcg atggacaaag
    15781 acgaattgtt ggcggcagtt gacgatttgg acgcggacga attggcggaa ctggcagacg
    15841 atttgccgca ccaagtggtt tacgaagcgc tacaaacccg cgatgaggaa gaacgcgccc
    15901 aagtcaaagc ggcaatgtcc tacgaagaca accaagtcgg tgcgattatg gacttcgagt
    15961 tggtcagcat ccgcgccgat gtcgcctgcg aagtggtgct gcgttacctg cgccgcttcg
    16021 acagcctgcc cgaccatacc gacaagattt ttgtcgtcga tgaaaacgac gtgctgcaag
    16081 gcgtgctgcc catccgcaaa cttttggtcg ccgaccccga agacttggtg gaaaacgtga
    16141 tggcgaaaga tgtcgtgcgt ttccgcgccg aagacgacgt ggaagaagcg gcgcaggcgt
    16201 ttgaacgcta cgacttggtt accgcgcccg tcgtcgatga aaacaaaaag ctcatcggca
    16261 ggattaccat cgacgagatg gtggacgtga tccgcgaaga atccgaagcg gatatgttga
    16321 acatggcagg tttgcaggaa gaggaagacc tgttcgcccc cgtcttggat tccgtcaaaa
    16381 accgctggat gtggctcgcc atcaacctct gcaccgcctt ccttgccagc cgcgtcatcg
    16441 gcgcgtttga aggcagcatc gaaaaaatcg tcgcactcgc cgcgctgatg cccatcgtcg
    16501 ccggcatagg cggcaactcg ggcaaccaga cgattaccat gattgtccgc gcgatggcga
    16561 tggggcagct gacggatatg caggcggggc gtttgctgaa aaaagaagtc ggcgtcgcct
    16621 tggtcaacgg catcatttgg ggaacggtca tgggcgcagt atcttggctg ctttacggca
    16681 gcctcggcat cggtttggtc atggttgccg cgatgacgct caacctgctg ctggcggcaa
    16741 ccgtcggcgt attaattccc gtggtaatgg aaaagttcgg acgcgatccc gcgctgggca
    16801 gctcggtgct gattaccgcc gttaccgact ccggcggctt cctgattttc ttgggtctcg
    16861 ccaccctgtt cctgctttaa atgccgtctg aaacacatga aaatgccgtc tgaaacaccc
    16921 tgtggggatt ttcagacggc atttgactat ttatctttgt tacacaagat tattggacag
    16981 tatgtcgggt ctgctctcgg gcaacgccga ccacatcctc cccgaacagc gcattgacat
    17041 cggtttcgtc aaacacgtat ttgctgtggc agaagtcgca atcgacttcg atgctgcctt
    17101 gttccgccac cacgccgccg acttcttccc cgcccagcat cagcagcata tcgctgactt
    17161 tgccgcgcga acaggtgcat gaaaattcaa acgtttccgg ctcgaacacg cgcggcggcg
    17221 tttcgtggaa caggcggtat aaaacgtgtt gcgcatccaa ttctgccagc tcctccgccg
    17281 tcagcgtgcg cgccagcgta ctgacgtgtt cccatgcctc ttcatccaac accgcttcag
    17341 gcagacgctg caccagcaga ccgcccgccg cttcatcgct tgcagacagg acgatgtgcg
    17401 tatcaagctg ttcggaacgt ttcatatagt tcatcaacat ttgcgcgata ccgtcgcctt
    17461 ccaaaggcac tacgccctgc cagggttcgc cgtctttggg ctgcagcgtc aatacgaaca
    17521 cgccgttgcc gcccaaaagg tcgccgaggc tttcgtcatc ggctatttct gccgcctcgt
    17581 cccaccgcgc ggtcgcacgg acggtacggt cggaagtcgc ttccgcaacc agcattttca
    17641 gccgcccctg cccctgaacc tgcacaatca gcgtgccttc gtttttgagg ttgcccgaca
    17701 gcagaacacc ggcagccaac agctcgccca aggcgcggcg gatggcggcg ggatagtttt
    17761 tctgttttac aatgtgctgc cacacgtttt ccagacggac gtgcagcccg cgcacgggca
    17821 tatcgtcgaa gataaagcgg gtacgcacat cggcgcggtt gatggcggtt tgattcatga
    17881 ttttctctga ctgattgttc ggatggcggc tatatggttg cggtcggcgc gaaaacaaga
    17941 cggacggcgg atgcgcttcc caaattatca ataaattata taaaaatcaa catattaact
    18001 caatctaaca agccgttttt tgccaaacag ccgttttttt atatacaatc aacaagatat
    18061 tttcgactga tacagcataa catcgcacgg cggcacgatg cctcctgcgc ggaaacaccg
    18121 atatggattc ttttttcaaa ccggcagttt gggcggtttt gtggctgatg tttgccgtcc
    18181 gccccgccct tgccgacgag ttgaccaacc tgctcagcag ccgcgagcag attctcagac
    18241 agtttgccga agacgaacag cccgttttac ccatcaaccg agcccccgcc cggcgggcgg
    18301 gcaatgccga cgaactcatc ggcagcgcga tggggcttaa cgaacagccc gttttacccg
    18361 tcaaccgagt ccccgcccgg cgggcgggca atgccgacga actcatcggc aacgcgatgg
    18421 ggcttaacga acagcccgtt ttacccgtca accgagcccc cgcccggcgg gcgggcaatg
    18481 ccgacgaact catcggcaac gcgatgggac ttttgggtat tgcctaccgc tacggcggca
    18541 catcgatttc taccggtttt gactgcagcg gcttcatgca gcacatcttc aaacgcgcca
    18601 tgggcatcaa cctgccgcgc acgtcggcag aacaggcgcg gatgggtacg ccggttgccc
    18661 gaagcgaatt gcagcccggg gatatggtgt ttttccgcac gctcggcggc agccgcattt
    18721 cccatgtcgg actttatatc ggcaacaacc gcttcatcca cgcgccgcgc acggggaaaa
    18781 atatcgaaat caccagcctg agccacaaat attggagcgg caaatacgcg ttcgcccgcc
    18841 gggtcaagaa aaacgacccg tcccgctttc tgaactgatt tcccaaggaa tacgcaatga
    18901 gtatgcccga aatgcccaaa tggtacgacg atgacggaca gatcgtgtcc tgtaccgaaa
    18961 aggtcaaagt gatgtccgaa aatatggccg agctgtatca gacggcacaa gacgcgtttg
    19021 aagacgcgct gctgatgggt tgcggcgaac gtcaattgcg cgattacctg ctcgcgctga
    19081 ttgaaggttt ggaaaatccc taccgcaaag tctgaacacg ccccggttgc tgcggcacgg
    19141 tttatccgtg ccgtttttgc gtttgtgcgc ggcttcggct tttcagacgg catatttgac
    19201 gttatgatta aacagttaac aagatttatc acaacgccgt caaaagacag acacacaaca
    19261 tgaacatcat ccgcgcgctc ctcatcatcc tcggctgcct cgccgccggc gaaaccgccg
    19321 ttttcctagc aggcatcaaa ctgcccggca gcatcgtcgg catgggcgtg ctgtttgcgc
    19381 ttttgcaggc aggttgggtc aaaacgtctt ggctgcaaca gcttaccgac gcgctgatgg
    19441 cgaatctgac gctgtttctc gtgccgccct gcgtggcggt catcagctat ttggatttga
    19501 ttgccgacga ttggttttcg atactggttt ccgcctccgc cagcactttg tgcgtactgc
    19561 tggttacagg caaggttcac cgctggatac ggagcattat ctgatgaacg aaatcctcag
    19621 gcagcccagc gttctgcttt tcctcacgct tgccgtgtac gcgcttgcga ttatcgtgcg
    19681 cacgcgcacg ggcaatatct tctgcaaccc cgtactcgtc agcactatcg tgctgattgc
    19741 ctacctgaaa atcctcgaca tcgattatgc ggtgtaccac aacgccgcgc aattcattga
    19801 tttttggctg aaacccgccg tcgtcgtgct tgccgtgccg ctctaccaaa accgccgtaa
    19861 aatcttcaac cagtggctgc ccgtcatcgt ttcacagctt gcgggcagcg ttacgggcat
    19921 tgttacgggg atgtattttg ccaaatggct gggcgcggaa cgcgaagtcg tcctctcgct
    19981 cgcgtccaaa tctgttacca accccatcgc cattgaaatc acccgctcca tcggcggcat
    20041 tcccgccatt accgccgcca ccgtcatcat tgccggtctg gtcggacaga ttgccggtta
    20101 caaaatgctg aagaacacag tcgtcatgcc ctcgtccgtg ggtatgtcgc tcggcacggc
    20161 ttcgcacgcg atggggattg ccgcctcgct cgaacgcagc cgccgcatgg cggcatacgc
    20221 gggactgggg ctgacgttca acggcgtact gaccgcgctg attgcgccgc tgctcatccc
    20281 cgttttggga ttttgaaccc gtttcagacg gcatttcagc ccatgctgtc tgaacgccga
    20341 cacactcgca aggagaaccg ttatggctgt caacctgact gaaaaaaccg ccgaacaact
    20401 gcccgacatc gacggcattg ccctctacac cgcccaagca ggcgtgaaga agcccgggca
    20461 taccgacctg acactgattg ccgtagccgc cggcagcacc gtcggtgcag tcttcacgac
    20521 caaccgtttc tgtgccgcgc ccgtccacat cgccaaatcg caccttttcg acgaagacgg
    20581 cgtgcgcgcc ctcatcatca acacgggcaa cgccaacgcg ggtacgggcg cacagggcag
    20641 aatcgatgct ttggcagtgt gtgccgccgc cgcccggcaa atcggctgca aaccgaacca
    20701 ggtgctgccc ttctccaccg gcgtgattct cgaaccgctg cccgcagaca aaatcatcgc
    20761 cgcgctgccc aaaatgcagc ctgccttctg gaacgaagcg gcacgcgcca tcatgaccac
    20821 cgacaccgtg cccaaagccg cctcgcgcga aggcaaggtc ggcgacaaac acaccgtccg
    20881 cgccacgggc atcgccaaag gctcgggcat gattcatccc aatatggcga ccatgctcgg
    20941 tttcatcgcc accgatgcca aagtttccca acccgtcctc caactgatga cgcaggaaat
    21001 cgccgacgaa accttcaaca ccatcaccgt tgacggcgac accagcacca acgacagctt
    21061 cgtcatcatc gccaccggca aaaacagcca aagcgaaatc gacaacatcg ccgacccgcg
    21121 ttacgcccaa ctcaaagaat tgttgtgcag cctcgcgctc gaactcgccc aagccatcgt
    21181 ccgcgacggc gaaggtgcga ccaagttcat caccgtccgc gtcgaaaacg ccaaaacccg
    21241 cgacgaagcc cgccaagccg cctacgccgt ggcacgttcg ccgctggtca aaaccgcctt
    21301 tttcgcctcc gaccccaacc tcggcaggct gctcgccgcc atcggttatg ccggcgttgt
    21361 cgacctcgat actgacctcg tggaaatgta tctcgacgat attttggttg ccgaacacgg
    21421 tggacgcgcc gcaagctaca ccgaagcaca agggcaggcg gtgatgtcga aggccgaaat
    21481 caccgtccgc atcaagctgc atcgcggaca aagtgccgcc accgtctata cctgcgacct
    21541 gtcgcacgga tacgtttcca tcaacgccga ctaccgttcc tgacccgaca cggcttcaga
    21601 cggcatacat aaaatgccgt ctgaaccgcc ggacaacatg ccatgacctc cacattcccc
    21661 cgccgcctcg cccgcaaaat ccgccaaacc cgccgcctgt cgcgcaaaag catcgccttt
    21721 ctgttccttt tggcaggttc ggcactcgtc gccctgaccg cgctgttttt tgcccatctt
    21781 gccgattttg cgctggaact gaacgccaaa ctggttcaac aatacccgtg gttcgcgtgg
    21841 gtcgcgcttc ctttgggttt gccgcttatt gcgtggctca cacgcaaatt cgcccccttc
    21901 accgccggca gcggcatccc gcaggtcatc gcctcactgt cgctgcccta cggcgcacag
    21961 aaaacgcggc tgatccgcct cgggcagacg ctgctgaaga ttccgctgac ctttttgggt
    22021 atgctgttcg gcgtgtccat cggacgcgaa ggtccgtccg tgcaggtcgg cgcggcagtg
    22081 atgggcgcgt ggggcgcgtg gtgcaagaaa cacggcttgg cattcaaagg gatgcaggaa
    22141 aacgatttga tggcggcggg cgcggcgggc ggtttggcag ccgcgttcaa cgcgccgctg
    22201 gcgggcgtga ttttcgccat tgaggaactc gggcgcggca tcatgttgcg ctgggagagg
    22261 caaattcttt tgggcgtgct cgcctccggt ttcatacagg tcgccattca gggcaacaac
    22321 ccgtattttt cgggtttcaa cggcggcgta ttggaacata tctttctgtg ggtcgcactg
    22381 tccggcctgg tttgcggcgc ggcgggcggc ctgttcggac gtttgctcta tcgcggtgcg
    22441 gcggcgtttg caccgcgcaa gatacgcggc ttcatccgca accgtccgct gctgctggcg
    22501 gcactgatgg ggctgctgct cgccctgctc ggcacgttct accaaggcaa aacctacggc
    22561 accggctacc acgaagccgc ccaagccctg cacggcatct acgaagcccc cttcggactc
    22621 gccgccgcca aatggctcgc caccgtattc agctattggg caggcattcc gggcggcatt
    22681 ttcactccct cgctgaccat aggcgcggtt ttgggcgagc atatcgccgc catcgccgac
    22741 atatcgcagg gtgcaaacat catcgtcctc atctgcatgg cggcatttct ggcgggcgcg
    22801 acacaatccc cgattacttc cgccgtcgtc gtcatggaaa tgacgggcgg acaaagcctg
    22861 ctgttttgga tgctgattgc ctgcattttc gcctcgcagg tttcgcgcca gttttcgccg
    22921 cgtccgttct accacgcatc gggaatgcgc ttccgccagc gcgtgcttca agaaaccgcc
    22981 gcccaaaccg gcaatgcgtc cgcaagaccg caaacagcaa acagcaaaac gggaatgccg
    23041 tctgaaaatt aaaacgcccc cgatcaaacg ccggcagccg ccttgatttg aataccgttc
    23101 cgccgccgct tgaaatttca gcgacaatgc cgtctgaacg acagaatgcg gttttcagac
    23161 ggcatttccc catcccgata ttgcctaaac aaaaccgaag cgtttgctat aattgcactt
    23221 tttaccgcac acgcacgccc atgtttcccg atttctccca aaccctctcc aaagaccgcc
    23281 acttcctgcg ttccgccttc aaaaatccca acaaatacgg cggtttgtcc aaaatcgaag
    23341 aaaaataccg aaaatcgcac gaaatctttt tgaagcgttt ggcagccttg ccaaaacccg
    23401 aattcgacaa caccctgccc gttcacgaga agctcgaaga aatcaaaaaa gccattgcca
    23461 agaatcaggt aacgattatt tgcggcgaaa ccggttcggg caaaaccacg cagttgccca
    23521 agatttgctt ggaactcggg cgtggggcgg caggattgat cgggcatacc cagccgcgcc
    23581 gtttggccgc gcgctccgta gcagagcgga ttgccgaaga gctgaaatcc gaaatcggca
    23641 gcgcggtcgg ctataaagta cgcttcaccg accacacctc gcgcgatgcc tgcgtcaagc
    23701 tgatgaccga cggcatcctg ctggcggaaa cgcagaccga ccgttatctc gccgcctacg
    23761 acacgattat catcgacgaa gcgcacgagc gcagcctgaa catcgacttc cttttgggct
    23821 atttgaaaca actcctgccg cgccgccccg atttgaaagt catcatcacc tcggcaacga
    23881 tagacgcaga acgcttctcc cgacacttca acggcgcgcc cgttttagaa gtgagcggac
    23941 ggacgtatcc cgtcgaaatc ctctaccgac cgctgaccgg caaagacgaa gacgacgcag
    24001 aagtggagtt gaccgacgcg attgtcgatg cggcggacga attagcgcga cacggcgaag
    24061 gcgatatttt ggtattcctg ccgggcgagc gcgaaatccg cgaaactgcc gaagccctgc
    24121 gcaaatccac gctgcgccgc aacgacgaaa tcctgcccct gttcgcacgc ctgtcgcacg
    24181 ccgagcagca caaaatcttc cacccctcag gcgcgaaacg ccgcatcgta ttggcaacca
    24241 acgtcgccga aacctcgctt accgtgccgg gcatcaaata cgtcatcgac accggcctcg
    24301 cgcgtgttaa acgctattcc gcacgggcga aagtggagca gcttcatatc gaaaaaatct
    24361 cccaagccgc cgcccgccaa cgatccggcc gctgcggacg cgtctccgca ggcgtgtgta
    24421 tccgactgtt ttcagaagaa gattttaaca gccgccccga atttaccgac cccgaaatcg
    24481 tccgcagcaa cctcgccgcc gtcatcctgc gcatggcagc attgaaactc ggcgatgtgg
    24541 cggcattccc gtttttagaa atgcccgatt cacggtatat caatgacggt tttcaggtgt
    24601 tgttggagtt gggggcggtg gaggccgtct gaaaacaggc agacataaaa gaaaatccgc
    24661 gtagagtgat gtaaacttac ccttgcttta ataagtagaa aatggtgggt ttacgtcccc
    24721 ccctgcggct actaaaaaaa tataagagta aacaaccttt ttgaaagaaa aatgtatgga
    24781 cgaaattcaa atacccaaaa aagtggaatt acaaaccaaa ctagaaaatg aaaagattgt
    24841 tttatcgaaa ggttctacca cgattattgt tggtgctaat ggcacaggga aaacaagatt
    24901 agctgtttat attgaagaac aattaaagga aaaagcacac agaatttcgg ctcatagagc
    24961 attaaaatta aaccctaatg tcaataaaat accagaaaag agtgccaaaa catatctatc
    25021 ttatggtcag aactgggatg gaatcgatgt atcaaataga aaaaattata gatgggataa
    25081 taactcatat actcatttac tcaacgattt tgattggtta ttacaatatt tattcgctca
    25141 acaaaataat attgcggtag caaataatca aaagctcaac cgtaatgaaa aagtaaccaa
    25201 ttcaaaaaca aagctagata ttttgcaaga agcatgggaa acattattac cacacagaaa
    25261 attacatatt acagcagatg atattcaagt ctctgctgta gataatgagg aattgtattc
    25321 tgcctcaaat atgagtgatg gagagcgagc acttttctat attcttggac aagttttgtc
    25381 agtagatgac ggttctgtct taatttttga tgagcctgaa ttacatattc ataaatcaat
    25441 tatttcaaat ctatgggata aaattgaaga attacgacct gattgttcat ttctaatcat
    25501 tacacacgat attgaatttg ctgcaactcg agtagctaaa aaatatgtta tcagaaatta
    25561 ttatccgacc cctgcttggg atatttctga agttcctgaa agtaattttg atgaagaaac
    25621 aataacgatg attttaggta gccgtaagcc aatattattt gttgagggca acaataatag
    25681 tttagatatt gctacttacc gctattgtta tcctgattgg accatcatac ccaaaggggc
    25741 atgcaaagat gtcattcaat cagtatcatc gctgaaaaaa ttaagtaatg aaatgccatt
    25801 actaaactta aaatgttcag gtattgtcga tttagatagt agggatgaaa gagaaattga
    25861 acaattaaat aatttgggta tttacatttt acctgtatcc gaaattgaaa atctttttag
    25921 cttaactgat gtagcaaaag agatattgaa actaaatcaa tattcagatg aagaattact
    25981 caataaactt aatggattta aatccgaact aattaaatat atagataatg aattaaaaga
    26041 cgataaatta gacgaatttg ttgtaaaaca ggttcgacgt aaaattgata attatttaaa
    26101 aaatattgat ttatcctcca aaataacaag tactgatatg aaaaaatcat tacttaatga
    26161 aatttctact ttaacagaac agaaaattga aacatggatt tcagaaatta aaaatgaaat
    26221 tcaaagatgt attgaacagc aagatttgga taaattactt actatatatg ataataaagg
    26281 actcttggct aaatcagctt gtgttttaaa aggaatgcgt aacaaacatg aatttgaaag
    26341 ctggataatg agaacattaa aaggaaggaa taaagatttt attgatgcaa tcagacagaa
    26401 acttccaatt ctggattaaa taaaaccatc tgaaaattta ccttcagata cagatatatt
    26461 tcatgaaaaa tcatcaaact acactctctt tccctacttc gagtagcctg aaaccttgcg
    26521 cagacaaaca aggcctgtct gaagaccgca gccaataccg cctgaccaaa ctcggcgaac
    26581 aaatggcgca cctgcctatc gacccgaaaa ttgcgcgtat tttgttagta ttattccgtt
    26641 tttaaaaatg cccgattcgc ggtatatcaa tgacggtttt caggtattgc tggaattggg
    26701 ggcggtggag gccgtctgaa aataaaatct ttctttataa aaaggcaggc catgtttcat
    26761 tttcagacgg cctaaatcat tgagaaacta aaaactatta aaaagggaat attgggtttt
    26821 aaaactcaat cggtaaattt ttattgtgaa atattaatga tgaaaaaatc tttccttacg
    26881 cttgttctgt attcgtcttt acttaccgcc agcgaaattg cctatcgctt tgtatttggg
    26941 attgaaacct taccggcggc aaaaattgcg gaaacgtttg cgctgacatt tgtgattgct
    27001 gcgctgtatc tgtttgcgcg ttataaggtg acgcgtttgt tgattgcggt gttttttgcg
    27061 ttcagcatta ttgccaacaa tgtgcattac gcggtttatc aaagctggat gacgggcatc
    27121 aattattggc tgatgctgaa agaggttacc gaagtcggca gcgcgggtgc gtcgatgttg
    27181 gataagttgt ggctgcctgt gttgtggggc gtgttggaag tcatgttgtt ttgcagcctt
    27241 gccaagttcc gccgtaagac gcatttttct gccgatatac tgtttgcctt cctaatgctg
    27301 atgattttcg tgcgttcgtt cgacacgaaa caagagcacg gtatttcgcc caaaccgaca
    27361 tacagccgca tcaaagccaa ttatttcagc ttcggttatt ttgtcggacg cgtgttgccg
    27421 tatcagttgt ttgatttaag caggattccc gcctttaagc agcctgctcc aagcaaaatc
    27481 gggcagggca gtgttcaaaa tatcgtcctg attatgggcg aaagcgaaag cgcggcgcat
    27541 ttgaagctgt ttggctacgg acgcgaaact tcgccgtttt taacccggct gtcgcaagcc
    27601 gattttaagc cgattgtgaa acaaagttat tccgcaggct ttatgactgc agtgtccctg
    27661 cccagttttt tcaatgcgat accgcacgcc aacggcttgg aacaaatcag cggcggcgat
    27721 accaatatgt tccgcctcgc caaagagcag ggctatgaaa cgtattttta cagcgcgcag
    27781 gcggaaaacg agatggcgat tttgaactta atcggtaaga aatggataga ccatctgatt
    27841 cagccgacgc aacttggcta cggcaacggc gacaatatgc ccgatgagaa gctgctgccg
    27901 ttgttcgaca aaatcaattt gcagcagggc aagcatttta tcgtgttgca ccaacgcggt
    27961 tcgcacgccc catacggcgc attgttgcag cctcaagata aagtattcgg cgaagccgat
    28021 attgtggata agtacgacaa caccatccac aaaaccgacc aaatgattca aaccgtattc
    28081 gagcagctgc aaaagcagcc tgacggcaac tggctgtttg cctatacctc cgatcatggc
    28141 cagtatgttc gccaagatat ctacaatcaa ggcacggtgc agcccgacag ctatctcgtg
    28201 ccgctagtgt tgtacagccc ggataaggcc gtgcaacagg ctgccaacca ggcttttgcg
    28261 ccttgcgaga ttgccttcca tcagcagctt tcaacgttcc tgattcacac gttgggctac
    28321 gatatgccgg tttcaggttg tcgcgaaggc tcggtaacgg gcaacctgat tacgggtgat
    28381 gcaggcagct tgaacattcg cgacggcaag gcggaatatg tttatccgca atgagtggcg
    28441 taaaaaccaa taaagacaaa tttagatgat gtcggggaag atgcccgacc gacaagacta
    28501 tgcaaaatat gaaaaaccaa gtacgcggat caggcatgga tgcccgatcc aatccggcca
    28561 atgtttcaga cggcctgcaa aacagttcgg gtcatatcgg taccaacacg cgttaccgcc
    28621 tgaccaaact cggcgaacag atagcgcgcc tacccatcga cccgaaaatc gcgcgcattt
    28681 tgctggcggc gaagaaacac gactgcatgg cggaaatatt ggtgattgcg tccgcgctgt
    28741 cgattcaaga cccgcgcgag cggccgctag aagcgcgcga tgcctcagcc aaggcgcacg
    28801 agcgttttac cgacaagcag tccgatttcc ttgcctatct gaacatttgg gacagcttcc
    28861 agcgcgaacg cgataaaggc ttgtccaaca agcagctggt gcagtggtgc cgccaatatt
    28921 tcctgtcgca cctgcggatg cgcgagtggc gcgagctgca ccaccagctt gcccaaaccg
    28981 cgattgaaat gggtttaacc accaaggaag ccgctttcag acgacctccc gaagtcaggc
    29041 agctcacgtc gtctgaaaat gcgggtgacc aagacctatc tgctaaactc aaacaaaaac
    29101 aactggataa aaagcaacac cgcgcccaaa tccgcgccgc caaagaagcg ggctacgaac
    29161 aaatccaccg cgccctgctc actggcctta tcgccaacgt cggcatgaaa tcgcccgacg
    29221 gtaacgacta caccggcgcg cgcggcagcc gcttccacct tttccccgcc tccgccctgt
    29281 tcaaagccaa acccaaatgg gtgatggcgg cagaattggt tgaaaccacg cgcctttacg
    29341 cgcgcgacgt cgccgttatc cagcccgaat ggatagagca ggaagcgccg cacctcgtcc
    29401 gctatcatta tttcgagccg cattgggaac aaaaacgcgg cgaagtcgtc gccagcgaac
    29461 gcgtgacgct ttacggtctg accgtattgc cgcgccgccc cgtgtcttac ggcaaagttg
    29521 cccccgaaga agcgcgcgaa atctttatcc gcagcgcgtt ggtggcgcag gaatgcgatt
    29581 tgaaagcgga tttttttgtc cacaacaaaa agctgattaa agaaattacc gaactcgaac
    29641 acaaatcgcg caagcaagac gtgctggtcg atgacgaagc cctgtttgcg ttttataacg
    29701 aacgactgcc cgaaatggct tggaaagacg cgcaaggcag cgtttgggga agtgaagatt
    29761 ccgtacggat tattgaatct gacaaagccg agaggtcgtc tgaaaatgag cgcaacgagt
    29821 ttcgtaaaaa caagcgtaat gggtctcgcc aaaatgaaaa tcacggcaac accgtaggtt
    29881 gggttgaaaa cccaacatca gccgcaactg caaaaactgt tgggtttgac aatccaacct
    29941 acgctgccca acaaaccacc ccctcccccg tgggggaggg tcggggagag ggcaaaacag
    30001 ttgccgcaca aaccaacttt tccgcaaccg cagcaaaccc tctccctaac cctctcccgc
    30061 aggagaggga acagagtgcc gcagcttcaa cgatttcaga cgacctgcgt cctgcaaatc
    30121 tgcagcaaac cgccccctcc cccgtggggg agggctgggg agagggcaaa acagttgcca
    30181 cacaaaccaa cttttccgca acctcaacaa accctctccc gcaggagagg gaacagagtg
    30241 cctcagcttc aacgttttca gacgacctgc gtcctgcaaa tctgcagcaa ccctctccct
    30301 cccccgtggg ggagggctgg ggagagggca aaacagttgc cacccaaacc aacttttccg
    30361 caacctcaac actttcagac gactccaaac ccaaaaagca gcctgcaccc caaaaaaacc
    30421 gtctgaaacc cctacccctc gccgacatcc gcaccttcca agcctggctc aaaaccgccg
    30481 agcgcgacaa tccgcgcctg ctgttcctca gccgcgacga tctgatgcaa cacgccgccg
    30541 cacacattac cgaagaacag ttccccaaat tctggcaaac cgcagacggc aaattcaaac
    30601 tttcctaccg cttcgagccg caccatccgc tagacggcgt gaccatgacc gtgccgctga
    30661 ccgtcctcaa ccgcctgcac gcgccgtcgc tcgaatggct ggtgcccggc atgatacgcg
    30721 aaaaaatcca gttgcaaatc aaagcactgc ccaagcaaat ccgccgcatc tgcgtgcccg
    30781 tgcccgaatt catcacccaa tttttaagcc aaaaccccga ccgcaacgcc cccatcctgc
    30841 cccaactcgc ccaagccatc gccaaaaccg caggcgacat ccgcatattc gagcaaatca
    30901 accaagacga atgggccgcg ttcaggctgc ccgaacactg ctatttcaac ctccgcatta
    30961 tcgacgacgg cggacaagag cttgccggcg gccgcaaact gcacgaattg caacaacaac
    31021 tcggtcaagc tgccgccgtt accttccgtg acaacaccca agaatttgag cgcgacaacg
    31081 tcaccgcatg ggacatcggc accctgcccg aatccatcaa attcgcacgc ggcaaacaac
    31141 agctcaccgg ctatctcggc ctacaaaaag aaaaagacgg ccgcatcgcc ctgcgcctgt
    31201 ttgataccac agaagccgca gagcaggcac accgtcaagg tgtcatcgaa ttgatgaagc
    31261 tgcaattaaa agagcaggta aaggatttga acaaaggcat ccaaggcttc acccaagctg
    31321 ccatgctgct caaacacatc aacgccgaca ctctgcgcga cgacctcacc caagccgtct
    31381 gcgaccgcgc ctttatcggc gaagacgagc tgccgcgcaa cgaaaaagcc ttcaaagaac
    31441 aaatcaaacg cgcccgcagc cgcctgcccg ccgtcaaaga agccctcagc cgctacctgc
    31501 aggaaaccgc cgccgtctac gccgaactca acagcaaact cggcaaacac ccattgaccc
    31561 accttctaag actacgcctg caaaccctgc tcgccgccgg cttcgccacc cgaaccccgt
    31621 gggcacaatg gccgcgcctc cccatctacc tcaaagccat gaccctgcgc ctcgaaaaat
    31681 acagcagcaa ccccgcccgc gacgcagccc gcgaagccga tatccaagag ctggaacaaa
    31741 tgtggcagga aaaaacagac agcctgatta aacaaggtct ccccatttca gacggcctcg
    31801 ccgcgtttaa atggatgatt gaagaattga gggtgtcgct gttcgcgcag gaattgaaga
    31861 caccgtatcc ggtgtcggtg aagcggctgt tgaaagagtg ggaaaaaatt gaaaaataaa
    31921 aaaacagcct gaaaagtttc aggctgtttt tttatttgac taatcgaagt ttcctatatc
    31981 tatttaagtc cctctcaact aatccaaaag ttaaatcagc aacatctttg ggggatacgt
    32041 ttaaattttc agcaatctgt tcaataccaa tgccatcatt ttttaaaata gtaagcattt
    32101 tacgtaatgc gcttgatatt tccctttcca ttggctctgg ttcgatagtt cgatattttt
    32161 tctttgcaaa caaaggacaa agattgtgta tatacatcct atcagtaatc attcctaatt
    32221 tatgcatccg atatgctaag gcaacaagtg atacaccaaa tcgtcttttg atttttaata
    32281 aattttcaat agtgatagga acatgacgat ataagcgtag tgcagcctcc ggcattaaaa
    32341 aagctgaagc aaaggcatta gcctcttttt cgataatatc acgaggttca tcttctgtaa
    32401 tttcactatt tttactatgt tccatactgt atttatcacg gattaagtgc cctaattcat
    32461 gggcagcatc aaatcgacta cgttctgcag atttttgtgt atttaaaaat acaaatggat
    32521 gattttcata ccaagtacaa aaggcatcaa tgtcctttgt atctaaagat aatgaaaata
    32581 cacgaacacc cttagcttca agtagggtga tcatattcgg aataggttca ttgccaagcc
    32641 cccattctaa tcttagttcc tgagcagcct cttcaggaga aatatcagaa aaatcaggca
    32701 atacggcttg acttagtgta aattctgtct cgagccagtc atttaacaaa aaagccgtaa
    32761 tgctatgatt taatgcttgt ttttcaagcc tcttcgaggt gcgtgaacga gcacgaaaac
    32821 ttactgcctg agatttcaac tcaggcagtc tttcgtcatt agtaaagaaa tgaactggaa
    32881 actctaataa attggctaat tcatttaaat caggtatttg ctcatctttt acatagtttc
    32941 taacctgtcg agcggtaata cctaataact cagctaattt tgtttgcgta caaccacgtt
    33001 tatccagcgc aaattccagt ctctcacgat taaatgtctg catgatttat cattcaaatt
    33061 atcctgcttt ttgttttctt tcaaccaaag gctcatattc ttcaacaggt tgcttacgtt
    33121 caagctcatc aaatttagtt aaatcaacat cagctaatat aattcgctgc ttgtacccag
    33181 ttatttgatg actaacaaaa ccactcggta aagataattc aagttgcact ttattatact
    33241 tccagtgaaa cagcagaacc caaaactgca cagtatcagg caaatctagt tttgaattac
    33301 gaatagcctc ctcaaatccc ttacctttcc ttgcggttgt cattggcatc ccgtgatgcc
    33361 taccaacatc tgaagtagca gtagccacaa taatactttt agttcgacat ggcgagagac
    33421 atagaaatgc accacccgac caaggctcaa gcgtccagcc atctttactt aaatataccc
    33481 ttagagcaaa tgtaatttct gcttgccgat acatccccaa tgtatttctg tcagataatg
    33541 ctgctttgtc ctgaatatta ttatgcgcag taagtacaat ctctttaagc atctcctgag
    33601 ataagtactt gctgatttca cttaaagcaa tatcactatt ttgttgctcg actatttctc
    33661 ctacttcaaa tgggaaaggt tctgataatg caaattccac cataaaaatt tcctaatttt
    33721 atacgtaatg tttacacaat atatcaggaa atatgaaaac gtacaactat atctataaag
    33781 caattaataa gtagcctgcc caaccgtgtc cttatctttc ggcacacccg acctgcaaat
    33841 cacgcaaaac ttggaatccg tgtgtagggt gtgtgcggta catacgcacg cagtcttttt
    33901 aaaccacagc ccttcccaac taaaccaaaa ggtcgtctga accctatttt cagacgacct
    33961 tttgccactt tgtaaaacaa atcttcccac catcctctcc ccaaacatcg cccgaaccag
    34021 taaacttctc atatttcaac aactccttgg aagcaaacca tgtctggtat ctacctaccc
    34081 cgcctattcc cgccccatat cgccgaacgc ggcctgttgt attttcagca gggcaaggtt
    34141 ctcgatgtcc gaaaaacttc cgccgggcat tatcggacgg aggtgtgcgg ttcggaaaac
    34201 tattgggtat agttgaagct ggatagtgat ttgtatatta aagacgaagg ctgcaattgt
    34261 ccttatatct aagagtgcaa acatacctta aattactata ttgcataggc aaaatacaag
    34321 cctataacga attggaaaca aaatgccgtc tgaaaacatc ttcagacggc attataaaat
    34381 ctgttcacct tttcagatga gtaatgtaca cccttataca atttttgcta ctatgcccca
    34441 taaatccacg gctaaagata tccttattat gtcctatgat ttatcgaaac gacttgtaat
    34501 cggcttagca tcaagtgccc tattcgactt atccgaatcg gataatatat ttagaatgga
    34561 aggggcagaa acctataggc aatatcagag agaaaaacaa aaccatcccc taaaaaaggc
    34621 gttgtctttc catttattaa aaaacttctg tcaatcaatg aaataaaccc aaacgaccca
    34681 acgattgggt ttattctttt atccagaaac aatccagata cagattacga gtcataacta
    34741 taggcttaat attacacgat tctcattcca tcaaggcgga aaaccgcaca aatactgaaa
    34801 cactatcgat cgatttgtaa acaagcctac ttaagtaact tgcagtcctt atcatttcct
    34861 ttaaaataat ccagcccgtc actacacgaa ctggcggact tcttgcaaat aaaggttact
    34921 agattttcat tcatcttaat aataaaagga tttttatctt tatctatggc taccgccttc
    34981 aacatgaatt tactgtctaa agccccgcgc gcgattccat tcaaacggat acaaaagcct
    35041 tctgcctctt taatcggcaa acttggccac ttggtagatg tttgtttaaa cctcccattc
    35101 tgcagataaa acttttccat aaaatgtgca ttttctaaca aggctgcccg cactgcattt
    35161 atctttgctt tctcaacata attgcgatag ctcggataaa caattaaagc aagtacagac
    35221 aatatcaaga ccactgatat taattcaacc agcgtaaacc cccgattatc agtcattact
    35281 ttacttccaa taagaacaga ttattcaaca tatttctttg aacagactta ctatcccatt
    35341 caacagtatg catatttccc actctatttt ttagcggccg gtatagccgg tttggctggg
    35401 ccttttggtg cgggcgcgcc gaccgaagcc tg
//
LOCUS       DAXHRP010000004        32139 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.004, whole genome shotgun sequence.
ACCESSION   DAXHRP010000004 DAXHRP010000000
VERSION     DAXHRP010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32139
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.004"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..223
                     /locus_tag="ACFM72_000122"
     CDS             <1..223
                     /locus_tag="ACFM72_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256766.1"
                     /translation="FQTDAPGFQYARARCSLVRRHRRQRPIFRGTPVSGVFKGSAVRC
                     FPAARLQTASPARPLDKACAWGDNGVLLF"
     gene            234..512
                     /locus_tag="ACFM72_000123"
     CDS             234..512
                     /locus_tag="ACFM72_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256767.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFVANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIVLLVVYLFHYFGAF"
     gene            531..1679
                     /gene="earP"
                     /locus_tag="ACFM72_000124"
     CDS             531..1679
                     /gene="earP"
                     /locus_tag="ACFM72_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HFC6256768.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDVVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCEA
                     VRFDSGALRKRLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPLTLLLAGAQIIDS
                     LKQNGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRCLSDDLNGGGALSAT
                     QRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            1722..2282
                     /gene="efp"
                     /locus_tag="ACFM72_000125"
     CDS             1722..2282
                     /gene="efp"
                     /locus_tag="ACFM72_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HFC6256769.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(2332..3177)
                     /locus_tag="ACFM72_000126"
     CDS             complement(2332..3177)
                     /locus_tag="ACFM72_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
                     /protein_id="HFC6256770.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(3294..3875)
                     /gene="metW"
                     /locus_tag="ACFM72_000127"
     CDS             complement(3294..3875)
                     /gene="metW"
                     /locus_tag="ACFM72_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HFC6256771.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRILERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            complement(3872..5011)
                     /locus_tag="ACFM72_000128"
     CDS             complement(3872..5011)
                     /locus_tag="ACFM72_000128"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HFC6256772.1"
                     /translation="MSQNASVGIVMPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALADYLGIEQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            5161..5361
                     /locus_tag="ACFM72_000129"
     CDS             5161..5361
                     /locus_tag="ACFM72_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256773.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRKQKRALRDVAKISAWVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            complement(5466..5591)
                     /gene="ykgO"
                     /locus_tag="ACFM72_000130"
     CDS             complement(5466..5591)
                     /gene="ykgO"
                     /locus_tag="ACFM72_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HFC6256774.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR"
     gene            complement(5591..5866)
                     /locus_tag="ACFM72_000131"
     CDS             complement(5591..5866)
                     /locus_tag="ACFM72_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HFC6256775.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            6065..6943
                     /gene="metF"
                     /locus_tag="ACFM72_000132"
     CDS             6065..6943
                     /gene="metF"
                     /locus_tag="ACFM72_000132"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HFC6256776.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            7080..9356
                     /gene="metE"
                     /locus_tag="ACFM72_000133"
     CDS             7080..9356
                     /gene="metE"
                     /locus_tag="ACFM72_000133"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HFC6256777.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADYVAAGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHANTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGIIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            9635..10372
                     /locus_tag="ACFM72_000134"
     CDS             9635..10372
                     /locus_tag="ACFM72_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HFC6256778.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            10621..12024
                     /locus_tag="ACFM72_000135"
     CDS             10621..12024
                     /locus_tag="ACFM72_000135"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC6256779.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            12303..12680
                     /gene="sdhC"
                     /locus_tag="ACFM72_000136"
     CDS             12303..12680
                     /gene="sdhC"
                     /locus_tag="ACFM72_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HFC6256780.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            12674..13015
                     /gene="sdhD"
                     /locus_tag="ACFM72_000137"
     CDS             12674..13015
                     /gene="sdhD"
                     /locus_tag="ACFM72_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HFC6256781.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            13018..14781
                     /gene="sdhA"
                     /locus_tag="ACFM72_000138"
     CDS             13018..14781
                     /gene="sdhA"
                     /locus_tag="ACFM72_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HFC6256782.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDANTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            14901..15608
                     /locus_tag="ACFM72_000139"
     CDS             14901..15608
                     /locus_tag="ACFM72_000139"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HFC6256783.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            15612..15860
                     /locus_tag="ACFM72_000140"
     CDS             15612..15860
                     /locus_tag="ACFM72_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HFC6256784.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            15972..17255
                     /gene="gltA"
                     /locus_tag="ACFM72_000141"
     CDS             15972..17255
                     /gene="gltA"
                     /locus_tag="ACFM72_000141"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HFC6256785.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            17460..20288
                     /locus_tag="ACFM72_000142"
     CDS             17460..20288
                     /locus_tag="ACFM72_000142"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HFC6256786.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVVGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADAYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQNREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSSL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYEEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            20388..21569
                     /gene="odhB"
                     /locus_tag="ACFM72_000143"
     CDS             20388..21569
                     /gene="odhB"
                     /locus_tag="ACFM72_000143"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HFC6256787.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAETGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            21828..23261
                     /gene="lpdA"
                     /locus_tag="ACFM72_000144"
     CDS             21828..23261
                     /gene="lpdA"
                     /locus_tag="ACFM72_000144"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC6256788.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELLTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            23356..23643
                     /locus_tag="ACFM72_000145"
     CDS             23356..23643
                     /locus_tag="ACFM72_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256789.1"
                     /translation="MNKEIVGIFFIPAGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            23697..24908
                     /gene="sucC"
                     /locus_tag="ACFM72_000146"
     CDS             23697..24908
                     /gene="sucC"
                     /locus_tag="ACFM72_000146"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HFC6256790.1"
                     /translation="MEANSGHSTNLKEKSMNLHEYQAKELLASYGLPVQGGILAHNGE
                     EAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTD
                     ANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKI
                     FKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLA
                     VRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIG
                     CMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINI
                     FGGIVRCDMIAEAIVAAVKEINVNVPVVVRLEGNNAELGAKILNESGLKLTSADGLND
                     AAEKIVAAVNA"
     gene            24919..25809
                     /gene="sucD"
                     /locus_tag="ACFM72_000147"
     CDS             24919..25809
                     /gene="sucD"
                     /locus_tag="ACFM72_000147"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HFC6256791.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVSKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            25838..26053
                     /locus_tag="ACFM72_000148"
     CDS             25838..26053
                     /locus_tag="ACFM72_000148"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256792.1"
                     /translation="MPSETGNRVSDGILFVISKRGSLNIPTLFLPFWGSQRPLQNSPK
                     SPKFPPRHLGDFGEFCKGLGLSVPVCA"
     gene            complement(26360..27955)
                     /locus_tag="ACFM72_000149"
     CDS             complement(26360..27955)
                     /locus_tag="ACFM72_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="funZ protein"
                     /protein_id="HFC6256793.1"
                     /translation="MKPLKTLEFGFVDAANYRRRENKDLFNRIFVKGEYLDELCEPNI
                     SFLIGEKGTGKTAYAVYLTNNFYKNIHATTKFVRETDYSKFIQLKKARHLTVSDFTSI
                     WKVILYLLISNQIKCKENGILSSIFNKFKALDEAINEYYYGAFDPEIVQAITLIENSK
                     EAAEMIFGKFVKLGEEESQQITFTESKFQANLGFIERKFKDALSQLKLKDNHILFIDG
                     IDIRPSQIPFDEYHECVKGLANAIWMLNNDIFPSIKDSKGRMRVVLLIRPDIFDSLGL
                     QNQNTKLQDNSVFLDWRTDYKSYRSSKIFGVFDHLLRTQQEKQDSLEKGNSWDYYFPW
                     NAPNLHDEYKNLTSFISFLRKSYYRPRDILQMLTLLQKNKKSKEDYVVAEDFDNTSFQ
                     REYSIYLLGEIKDHLLFYYSQSDYQNFLKFFEFLNGKDRFKYSDFLKAFERLKKHLQT
                     TSVEIPKFMSTANEFLQFLFDLNVIAYLDNPEDETKPYIHWCFKDRNYANISPKIKTE
                     TEYLIFSGLSKALDVGTPFKNKQ"
     gene            complement(27989..30838)
                     /gene="uvrA"
                     /locus_tag="ACFM72_000150"
     CDS             complement(27989..30838)
                     /gene="uvrA"
                     /locus_tag="ACFM72_000150"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HFC6256794.1"
                     /translation="MCNHHPQHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPTVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPEKVKKVILHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPERMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGRIIAKGSPEQVAKVKGSYTGKYLKVVLR"
     gene            30993..31790
                     /locus_tag="ACFM72_000151"
     CDS             30993..31790
                     /locus_tag="ACFM72_000151"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HFC6256795.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSICCGWWSLPFWVFTV
                     FALQFFRDPAREIPLNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAP
                     QIESEPESEPASQAASVETAANPSAEQRQIEATAAKIQAAVQDVLKD"
BASE COUNT         8015 a         7893 c         8172 g         8059 t
ORIGIN      
        1 atttcaaacc gacgcgccgg gttttcaata tgcccgcgcc cgatgcagcc ttgtccgcag
       61 gcatcggcgg cagcgtccga tttttcgggg aacgcccgtc tcgggcgtat ttaaaggttc
      121 ggcggtgcgg tgttttcctg cggcaaggct tcagacggca tcgccggcgc gtccgttaga
      181 caaggcgtgc gcttggggcg ataatggcgt tttgcttttt tgaaagcctt gcaatgtccc
      241 gaaacctgct tgtccgctgg cttgtcgtct gcctcatccc tttggcgaca cttgccgttt
      301 tcgtcgccaa tccgcccgaa gacaaacccc agcatctgat caacggcatc atccttgcct
      361 gcgaagcgac gtttttgttc aaattcgtcc ttttcgacac catcaagcat catttgaaac
      421 aagagtttga tttgaaacgt caaaccatgt tgctgtttat tccgattgtt ttgctggttg
      481 tgtatttgtt ccactatttc ggcgcgtttt agcttgtttc cgttatttct atgaatactc
      541 ctccttttgt ctgttggatt ttttgcaagg tcatcgacaa tttcggcgac atcggcgttt
      601 cgtggcggct cgcccgtgtt ttgcaccgcg aactcggttg gcaggtgcat ttgtggacgg
      661 acgatgtgtc cgccttgcgt gcgctttgcc ctgatttgcc cgatgttccc tgcgttcatc
      721 aggatattca tgtccgcact tggcattccg atgcggcaga tattgatacc gcgcctgttc
      781 ccgatgtcgt catcgaaact tttgcctgcg acctgcccga aaatgtgctg cacattatcc
      841 gccgacacaa gccgctttgg ctgaattggg aatatttgag cgcggaggaa agcaatgaaa
      901 ggctgcatct gatgccttcg ccgcaggagg gtgttcaaaa atatttttgg tttatgggtt
      961 tcagcgaaaa aagcggcggg ttgatacgcg aacgtgatta ctgcgaagcc gtccgtttcg
     1021 atagcggagc cttgcgcaag aggctgatgc ttcccgaaaa aaacgccccc gaatggctgc
     1081 ttttcggcta tcggagcgat gtttgggcaa agtggctgga aatgtggcga caggcaggca
     1141 gtccgttgac actgttgctg gcgggggcgc aaattatcga cagcctcaaa caaaacggcg
     1201 ttattccgca agatgccctg caaaacgacg gcgatgtttt tcagacggca tccgtccgcc
     1261 tcgtcaaaat ccctttcgtg ccgcaacagg acttcgacaa actgctgcac cttgccgact
     1321 gcgccgtcat ccgcggcgaa gacagtttcg tgcgcgccca gcttgccgga aaacccttct
     1381 tttggcacat ctatccgcaa gacgagaatg tccatctcga caaactccac gccttttggg
     1441 ataaggcaca cggtttctac acgcccgaaa ccgcatcggc acaccgctgc ctttcagacg
     1501 acctaaacgg cggaggggct ttatccgcca cgcaacgcct cgaatgttgg caaatcctgc
     1561 aacaacatca aaacggctgg cggcaaggcg cggaggattg gagccgttat cttttcgggc
     1621 agccttccgc atccgaaaaa ctcgccgcct ttgtttcaaa gcatcaaaaa atacgctaga
     1681 atagtgcgtt ttacgacaac cgatttgatt ggaaaatcac aatgaaaaca gcacaagaac
     1741 tgcgcgccgg caatgtattt atggtcggca acgatcctat ggtcgttcaa aaaaccgaat
     1801 acatcaaagg cggccgctct tccgccaaag tcagcatgaa actgaaaaac ctgctgaccg
     1861 gcgcggcttc cgaaaccatt tacaaagccg acgacaaatt cgacgtggtc atcctgtccc
     1921 gcaaaaactg tacgtacagc tactttgccg acccgatgta cgtctttatg gatgaagaat
     1981 tcaaccaata cgaaatcgaa gccgacaaca tcggcgacgc gttgaaattc atcgttgacg
     2041 gtatggaaga ccaatgcgaa gttaccttct acgaaggcaa ccccatttct gtcgaactgc
     2101 ccaccatcat cgtacgcgaa gtcgagtata ccgagcctgc cgtcaaaggc gatacttcag
     2161 gcaaagtgat gaaaaccgcg cgcctggtcg ggggcaccga aatccaagtg atgtcttaca
     2221 tcgaaaacgg cgacaaaatc gaaatcgata cccgcaccgg cgaattccgc aaacgcgctt
     2281 gatttgccgc attgaaaaat gccgtctgaa aacgtttcag acggcatttt tttatcttcg
     2341 ccccaagttt ggattgaagt agatgttttt ttcgtaaacg acaatacgcg tgattttgcc
     2401 attttcgtca aaatggatgt ctaaaaacgg tttgtcggga ttgcgttcac ggttggacag
     2461 ccggaagagt gattggtttt caagcatttc tccgtgtatt ttcagatagc cgggcaattg
     2521 gccgatgtat tggaaattgc cgccaagtcc gttgttgtgc cggctcgaat aggcaggggt
     2581 tgccgaaact tcaaaataac gcgtgcgttt cggctcctcg ccttgtccgc gggtttcttg
     2641 actgccctgt atcagcaaca gcgtcgcttc tcggaggcgg cgttcctgtt ccatcaaggc
     2701 atcttgtgcc tgccggctga tcgtgcgctt tccgtaacgc aagtcttcaa ttgccagtat
     2761 gattttctga tggtagtcgg gatcttcagg gcggatgtcg ggaaacagca gccgctgtat
     2821 gttgtcatag ccgccgccgg gtaagccgaa acgggtttcc agttcgtgat gggaaagggc
     2881 aaacagacag tccgagtcaa tgtgttcggc gatttgctgc atgagatcgt caatgccggt
     2941 ggcggggtgc aggtcggtgc aatttgacgg cggcacgctt tctgcctgct tgacgttatc
     3001 aggggcggat gcggccggtt gcaaatcggt ttggggcgcg gaagacgaag cggcggatgc
     3061 cgtggacgag gcggcggatg cgccgttttc tttcgtttta tcttctttgc tcggggaaca
     3121 cgcggtcagc atcattgcgg caagccataa gagaagtgat gaggttttgt ttttcattct
     3181 attgtttcca gtattaaaga ggccgtctga aaacctaccg tttcattttt cagacggcct
     3241 gttgttaata gaaccgaaga acctgttaat gccgacaagg ttctcaatct gtcttacccg
     3301 acgcggtaaa atgcaagact gcccaaaagg ttggggaaat gtttgacctg tctgttgccc
     3361 gtcatcacgg cgcgctcgag gatgcggatg ttgtttttgg cgcacaataa atcaaagtct
     3421 ttgagcgtgc accaatggat attgggcgtg tcgtaccaat ggtagggcat acgttcggaa
     3481 accggcatat gtccgccgag tgcgatttgg acgcggttgc gccagtagcc gaaattcggg
     3541 aagctgacaa tcgcctgttt ggcaacgcgc atcaggcagc gcaggatttt ttcggtattc
     3601 tgcatcgctt ggatggtttg gctcaacaca atcacatcaa aactttgatc gttgaatgcg
     3661 gttaaacctt cttccaaatc ggcttggata acattcacgc cgcgcgacat cgcggcaatc
     3721 acgctgtcgg tgtcgatttc gatgccgtag ccgctgcatt ttttgtgttc gaccaaggcg
     3781 gcaagcagtt cgccgtcgcc gcagcccaag tccaagacgc ggctgccttc gggtatccgg
     3841 tcgtaaatca gttgcaaatc atcgcgcagg ttcattgctg acattcctta taaacgttgt
     3901 tcatataggc ggcgaccgca cgcatatagg cttcgtcttc cattaaaaag gcatcgtgcc
     3961 cgtgtgcgga tttgacttcg atatactgca cggatttttg tgcggcaatc agtgccttga
     4021 ccagttcgtg cgaacgttcg ggcgcgaaac gccaatcggt gctgaagctg gcgacaaaga
     4081 attttgcctg cacatcctgc acggcgcggg tcaggctgtt gccgaaatcc gccgccggat
     4141 cgaaatagtc caaagctttg gtcatcagca ggtaggtgtt ggcatcaaac cgtccgacga
     4201 atttgtcgcc ttgatagcgc agataggatt ctacttcaaa ttcaacgcca tagccgtatt
     4261 gatagccatt ggagcgcaaa tcgcgtccga attttttgcc caaaccgtct tcggcaagat
     4321 aggtaatgtg tcccatcatg cgggcaatcc gtaagccccg tgcaggaacg gtgttacggc
     4381 tgcggtaatg tccttcgttg aaatcggggt cggtcaaaat cgcctgacgc gccacatcgt
     4441 tgaacgcgat attttgcgtg gacagcttcg gcgcagacgc aatcactaaa gcatggcgca
     4501 cgcgttcggg ataggaaatc gcccactgca aagcctgcat accgcccaaa ctgccgccga
     4561 caaccgccgc ccattgttcg atgccgagat aatcggcaag cgcggcttgg gattttaccc
     4621 agtccttcac cgtaacaacc ggaaaatccg cgccgtattc cctgcccgtt tcaggattga
     4681 tcgacaaggg cccgctgctg ccgtcgcagc cgcccagatt attcaaaccg accacgaaaa
     4741 aacgttccgt atcaatcggt ttgccaggtc cgaccatatt gtcccaccag cccgtatatt
     4801 tatcttccgc cgaatgcctg cccgcaacat gatggttgcc cgacagcgcg tggcagatta
     4861 aaaccgcatt gtttttttca gcattcagct cgccgtaggt ttcaatcatc agatcgaaac
     4921 gcggcaaagt tttaccgttt tccaaaacca gcggcatctc aaacggaatt ttttggggca
     4981 ttacaatgcc caccgaggca ttttgactca tatcctgttc caacaaatgc ggcgaaaagc
     5041 gttattatat cgcaaacggc atgacttttt gacacggtcg gacaagcagc cggacgcgtt
     5101 tgaccctcat ccgccgcaca cgaatcatac tttttcagac gacctccacc gcttcccgac
     5161 atgataggca gacttttccg tatttttttc tttttcgcac ttgccgcgct gattatcaac
     5221 cgcctcttca gccgcaagca aaaacgtgcc ctgcgcgatg tcgccaaaat cagcgcatgg
     5281 gtactgcttg gcgcagctgc cgcgacactg ttttggtatc tgtttatgct gtatttcaaa
     5341 cacattccgg attcgtattg acggaaaaaa tgccgtctga aacgcatttt tctgtttcag
     5401 acggcatatt tgaaaagggc ttgcggtagg aggggcttta caaccgaagc aggaagggta
     5461 gggggtcagc gttggcgcgc tttaaaacgc ggattgcttt tgcagatgac gtaaactttg
     5521 cctttgcgtc tgacaatctg acagtcgcgg tggcgttgtt tggcggtttt gagtgaagac
     5581 agaacctgca ttatttatcc tttctaaacg atgacatgac ggattggaaa cgttggttga
     5641 atttgctggc acggccttcg gtgttgacgt tgcgctgctt gccggtatag acgggatggg
     5701 atgcggaaga agtatccagc gaaaacagtg gatattcttt gccgtctgtc caaaccatcg
     5761 tttttccgtg tgtttcggcg caagaacgaa tcagccagcc ttcattggcg ctgctgtcga
     5821 aaaaaaggac ggtccggtaa ttgtcaggat gaatattcgg tttcatatat tgccttgctt
     5881 gaagtgttat aacataacaa actctagcat aatttagaag ggttgtacaa ggaaatttaa
     5941 ctgttttgta atatattaga aattttcatg ataaacctga aaattttgaa attgactcat
     6001 attcggtgca attttattat gttgcctgaa atatcatata aaagataata aaaggtacgc
     6061 agccatgaat tacgcaaaag aaatcaatgc gttaaacaac agcctttccg atttgaaagg
     6121 cgacatcaac gtttcgtttg aatttttccc gccgaaaaac gaacaaatgg aaacgatgct
     6181 gtgggattcc atccaccgtc tgcaaaccct gcatcccaag ttcgtatccg taacctacgg
     6241 cgcaaattcc ggcgaacgcg accgcacgca cggcatcgtc aaacgcatta agcaagaaac
     6301 cggcttggaa gccgcgccgc acctgaccgg catcgacgct tctcccgacg aattgcgcca
     6361 aattgccaaa gattattggg acagcggcat ccgccgcatt gtcgccctgc gcggcgacga
     6421 gccgcccggt tacgagaaaa aaccgtttta tgccgaagac ttggttaagc tattacgctc
     6481 cgtcgccgac ttcgacatct ctgtagcagc atatcccgaa gtgcatcccg aagcgaaatc
     6541 cgcacaagcc gacctgatta atttgaaacg caaaatcgat gcgggcgcga accacgtcat
     6601 cacccaattt ttctttgacg tagaacgcta cctgcgcttc cgcgaccgct gcgtgatgtt
     6661 gggtatcgat gtggaaatcg tccccggtat tttgcctgtt accaacttca agcagctcgg
     6721 taaaatggct caagtaacca acgtcaaaat cccaagctgg ctgtcgcaaa tgtatgaagg
     6781 tttggacgac gaccaaggta cgcgcaatct ggtggcggca agtatcgcca tcgatatggt
     6841 caaagtcctg tcccgcgaag gcgtgaaaga tttccacttc tatacgctta accgcagcga
     6901 gctgacttac gccatctgcc atattttagg cgtgcgccct taaagctgaa aacggcttca
     6961 gacggcatcc gaggccgtct gaaaagcaaa acgccgcccc catcctagcc attctgattt
     7021 acaataccgg ccgattcgga ttgaaccggt ccttacaaaa tccaactgga gagttcaaca
     7081 tgacaacatt acatttctca ggcttcccgc gtgtcggcgc cttccgcgaa ttgaaattcg
     7141 cccaagaaaa atactggcgc aaagaaatca gcgagcaaga attgctggct gttgctaaag
     7201 acttgcgcga gaaaaactgg aaacaccaag ctgctgccaa cgccgattac gttgccgcag
     7261 gcgatttcac tttctacgac cacatcctcg acctgcaagt cgccaccggc gcgattcccg
     7321 cccgcttcgg cttcgacagc caaaacctgt ctttggaaca attcttccaa ctggcgcgcg
     7381 gtaacaaaga ccaattcgct atcgaaatga ccaaatggtt cgacaccaac taccactact
     7441 tggtgcctga attccacgcc aatactgaat tcaaagccaa cgccaaacac tacgtccaac
     7501 aactgcaaga agcccaagct ttgggcttga aagccaaacc gaccgttgtg ggtccgttga
     7561 ctttcctgtg ggttggtaaa gaaaaaggcg ccgttgaatt cgaccgtctg agcctgttac
     7621 ctaaactgtt gcctgtttac gttgaaatcc tgactgcttt ggttgaagcc ggtgccgagt
     7681 ggattcaaat cgacgagcct gctttgactg tcgatctgcc taaagaatgg gtagaagcct
     7741 acaaagacgt ttacgctact ttgagcaaag taagtgccaa aatcctgctg agcacttact
     7801 tcggttctgt tgccgaacac gccgcattgt tgaaatccct gcctgttgac ggcctgcaca
     7861 tcgacttggt acgcgctccc gagcaactgg acgcatttgc cgactacgac aaagttctgt
     7921 ctgcaggcat catcgacggc cgcaacatct ggcgcgccaa cctgaacaaa gttttggaaa
     7981 ctgttgagcc tctgcaagcc aaactgggcg accgtttgtg gatttccagc tcttgctctc
     8041 tgctgcacac tccatttgac ttgtcagttg aagaaaaact gaaagccaac aaaccggacc
     8101 tgtactcttg gttggcattt accctgcaaa aaacccaaga attgcgcgtt ctgaaagccg
     8161 cattgaacga aggtcgcgat tccgttgccg aagaactggc cgccagccaa gctgctgccg
     8221 attcacgcgc caacagcagc gaaatccacc gtgcagacgt tgccaaacgc ctggccgatt
     8281 tgcctgccaa cgcagaccaa cgcaaatctc catttgccga ccgtatcaaa gcgcaacaag
     8341 catggttgaa cctgcctctg ctgccgacga ccaacatcgg ttctttcccg caaactaccg
     8401 aaatccgcca agcacgcgca gccttcaaaa aaggcgaact gtctgccgcc gattacgaag
     8461 ccgcgatgaa aaaagaaatc gccttggtgg ttgaagaaca agaaaaactg gatttggacg
     8521 tactggtaca cggcgaagcc gagcgtaacg acatggtcga atacttcggc gaattgttga
     8581 gcggttttgc attcacccaa tacggctggg tacaaagcta cggctcacgt tgtgttaaac
     8641 caccgattat cttcggtgac gtaagccgtc ctgaagccat gactgtcgcc tggtctactt
     8701 acgcacaaag cctgaccaaa cgcccgatga aaggtatgtt gaccggccct gtaaccattc
     8761 tgcaatggtc ttttgtccgc aacgatattc ctcgctctac cgtgtgcaaa caaatcgcac
     8821 tggctctgaa cgacgaagta ttggatctgg aaaaagcagg catcaaagtc atccaaattg
     8881 acgaacctgc catccgcgaa ggcttgccgc tgaaacgcgc cgattgggat gcctacctga
     8941 actgggcggg cgaatccttc cgcctgtcct ctgccggttg cgaagacagc acacaaatcc
     9001 acactcatat gtgctactcc gagttcaacg atatcctgcc tgcgattgct gcaatggatg
     9061 cggacgtgat caccatcgag acttcacgtt ccgacatgga actcttgacc gcgttcggcg
     9121 aattcaaata cccgaacgac atcggcccgg gggtttacga catccacagc ccgcgcgtac
     9181 cgacagaagc cgaagtggag cacctgttgc gcaaagccat cgaggttgta ccggttgaac
     9241 gtctgtgggt taacccggac tgcggcctga aaacacgcgg ctggaaagaa actctggaac
     9301 aactccaagt gatgatgaac gtaacccaca aattgcgtgc cgaattggcg aaataagccg
     9361 agaccgtatg aataaatacc gtctgaaagc ctttcagacg gtattttgtc ctgatttgcg
     9421 gcgcaagggc gcagttgccg gaaaatcttt tcattgcagc ttgttttttt ctaattcggc
     9481 tttatatgtg ggaaacaggc aaatcggagt tgtgtttgat agttttaaat aatttatatt
     9541 atttgaacta taaattatac aaatcatttt gcatggggta gaatgcccag cgattcacaa
     9601 ttatttctca aaccaatcta ttaaggagct taaaatggct ttgcaagatc gtaccggtca
     9661 aaaagtacct tccgtagtat tccgcacccg cgtcggcgac acttggaaag atgtgtctac
     9721 cgatgatttg ttcaaaggca aaaaagtagt cgtattctcc ctgcccggtg catttacccc
     9781 gacttgttct tcttcacacc tgccgcgtta caacgaattg ttcggcgcgt tcaaagaaaa
     9841 cggcgttgac gcaatctact gcgtatctgt aaacgatacg ttcgtaatga acgcttgggc
     9901 tgccgaagaa gaatccgaca acatctacat gattcctgat ggcaacggcg aatttaccga
     9961 aggtatgggt atgctggtcg gtaaagaaga cttgggcttc ggtaaacgct cttggcgtta
    10021 ctccatgctg gttaacgacg gcgtggttga aaaaatgttc atcgagcctg aagaaccagg
    10081 cgatccgttc aaagtatccg atgcagatac tatgctgaaa ttcgttgctc ctgattggaa
    10141 agctcaagag tctgtggcaa ttttcactaa accaggttgc caattctgcg ccaaagccaa
    10201 acaagctttg caagacaaag gtttgtctta cgaagaaatc gtattgggca aagatgcaac
    10261 cgttacttcc gttcgcgcca ttaccggcaa gatgactgcc cctcaagtct tcatcggcgg
    10321 caaatacatc ggcggcagcg aagatttgga agcttacttg gctaaaaact gatagctgtt
    10381 tgcttaaggc ggtttgatta aactgtctga tataccggat agagttattc gggcggttct
    10441 acactgccga tccgaataac tctatattta taagagaatt tggatattgt tgcactcaat
    10501 cgaaattttg tttttattta tctgaatgat gtttttgatt gggaaaatat ttaaatgccg
    10561 tctgaaaccg atatgttctg tgtcggcaat gtttcagacg aaaacggaag gacaaagatt
    10621 atgaaaaaaa ttcaagcgga tgtcgtcgta atcggcggcg gtactgccgg tatgggtgcg
    10681 tttcgcaatg cccgtttaca ttcggataat gtttacctga ttgaaaacaa tgtgttcggc
    10741 acaacctgcg cgcgcgtggg ttgtatgcct tccaaactct tgattgccgc cgcagaagcg
    10801 cgccaccacg cattgcatac cgacccgttc ggcgtgcatt tggacaaaga cagcatcgtc
    10861 gtcaacggtg aagaggtcat gcagcgcgtt aaatccgagc gtgaccgttt tgtcggcttt
    10921 gtcgttgccg atgtggaaga gtggcctgcc gacaagcgca tcatgggttc ggctaaattt
    10981 atcgacgagc ataccgtcca aatcgacgag catactcaaa ttacggcaaa aagtttcgtg
    11041 attgctaccg gttcgcgtcc cgtcatcctg ccgcaatggc agtctttggg caatcgtttg
    11101 attatcaacg atgacgtttt ctcatgggat acgctgccta agcgcgttgc cgtgttcggg
    11161 ccgggtgtta tcggtttgga actgggtcag gcattgcacc gtttgggcgt gaaagttgaa
    11221 attttcggtt tgggcggaat catcggcggc atttccgacc ccgtcgtttc agacgaggcg
    11281 aaagccgtgt tcggcgaaga attgaaactg catctggatg ctaaaaccga ggtcaaacta
    11341 gatgcagacg gcaatgtaga agtccattgg gagcaggacg gcgaaaaagg cgtatttgtt
    11401 gccgaatata tgctggcagc cgtgggccgc cgtccgaacg ttgacaatat cggtttggaa
    11461 aacatcaata tcgaaaaaga cgcgcgcggc gtacccgttg ccgacccact gaccatgcag
    11521 accagcattc cgcatatctt tattgcgggc gacgcgtcca accaactgcc tctgctgcat
    11581 gaagctgccg accaaggcaa gattgccggc gataacgcgg gccgctaccc gaatatcggc
    11641 ggcggtttgc ggcgcagcac catcggcgtg gtgtttacca gtccgcaaat cggctttgtc
    11701 ggtctgaaat acgcgcaggt tgccgcgcaa taccaagccg acgaatttgt catcggcgaa
    11761 gtatcgttca aaaaccaagg ccgcagccgc gtgatgctgg tgaacaaagg ccatatgcgc
    11821 ctgtatgccg aaaaagccac cggccgcttt atcggcgcgg aaatcgtagg ccctgccgcc
    11881 gaacatttgg cgcacttgct ggcatgggcg catcaaatga agatgaccgt tccgcaaatg
    11941 ctggatatgc cgttctacca tcccgttatc gaggaaggtc tgcgtaccgc gttgcgcgat
    12001 gccgatgcga aattgaaagc ctgaccgata tggcaaaaca atgccgtctg aaattttttc
    12061 agacggcatt ttgtttttgg ggatggggtc ggatgctgat accgtgtcgg gaagggggcg
    12121 gcaaaactaa aaatctttct tttaatctgc tgtttccacg cgtgtttgtc aaaatctatc
    12181 agtttgtttt taaaatacac tgttcaaaat gggataaaac aggtaaatta acgtttatgt
    12241 aacccagtgt agcaatgggt ttacggtttt tgagtcgata tataactaca gaggaattga
    12301 ctatgtctgc caaaccgcgt cctgtttatc tggatttgcc gaacatccgt ctgccgatac
    12361 ccgggatagt ttccatcctt caccgcatca gcggggtcgg gctgtttatt atgctgcctt
    12421 tcctgctgta tttcctgtcc ggtaccctga gtcaagagtc tgcatttgaa acttaccgtg
    12481 ccattgtttc ccatcctttg gtcaagctgg ttttaatcgg tgtattgtgg gcttatctgc
    12541 accattctct cgccggtatc cgctttttat ttttggatgc gcacaaaggc cttgagctga
    12601 atactgcgcg caataccgct aaagccgtat ttgcttctgc attggttttg actgtcgttt
    12661 tgggagcgtt gttatggtag aacgtaaatt gaccggtgcc cattacggtt tgcgcgattg
    12721 ggcgatgcaa cgtgcgactg cggttattat gttgatttat accgttgcac ttttagtggt
    12781 tctattttcc ctgcctaaag aatattcggc atggcaggca ttttttagtc aaacttgggt
    12841 aaaagtattt acccaagtga gcttcatcgc cgtattcttg cacgcttggg tgggtatccg
    12901 cgatttgtgg atggactata tcaaaccctt cggcgtgcgt ttgtttttgc aggttgccac
    12961 catcgtctgg ctggtcggct gcttggtgta ttcaattaaa gtaatttggg ggtaagtatg
    13021 ggttttcctg ttcgcaagtt tgatgccgtg attgtcggcg gtggtggtgc aggtttacgc
    13081 gcagccctcc aattatccaa atccggtctg aattgtgccg ttttgtctaa agtgttcccg
    13141 acccgttcgc ataccgtagc ggcgcagggc ggtatttccg cctctctggg taatgtgcag
    13201 gaagaccgtt gggactggca catgtacgat accgtgaaag gttccgactg gttgggcgac
    13261 caagatgcga ttgagtttat gtgccgcgcc gcgcctgaag ccgtaattga gttggaacac
    13321 atgggtatgc cttttgaccg tgtggaaagc ggtaaaattt atcagcgtcc tttcggcggc
    13381 catactgccg aacacggtaa acgcgcggta gaacgcgcct gtgcggttgc cgaccgtaca
    13441 ggtcatgcga tgctgcatac tttgtaccaa caaaacgtcc gtgccaatac gcaattcttt
    13501 gtggaatgga cggcacaaga tttgattcgt gatgaaaacg gcgatgtcgt cggcgtaacc
    13561 gccatggaaa tggaaaccgg cgaagtttat attttccacg ctaaagctgt gatgtttgct
    13621 accggcggtg gcggtcgtat ttatgcttct tctaccaatg cctatatgaa taccggcgat
    13681 ggtttgggca tttgcgcgcg tgcgggtatt ccgttggaag atatggaatt ctggcaattc
    13741 cacccgaccg gcgtggcagg tgcgggcgtg ttgattaccg aaggcgtacg cggcgagggc
    13801 ggtattctgt tgaatgccga cggcgaacgc tttatggaac gctatgcgcc gaccgtaaaa
    13861 gacttggctt ctcgcgacgt tgtttcccgc gcgatggcga tggaaatcta cgaaggtcgc
    13921 ggctgcggta aaaacaaaga ccatgtctta ctgaaaatcg accatatcgg cgcagaaaaa
    13981 attatggaaa aactgccggg catccgtgag atttccattc agttcgctgg tatcgatccg
    14041 attaaagacc cgattcccgt tgtgccgact acccactata tgatgggcgg tattccgacc
    14101 aactaccatg gcgaagttgt cgttcctcaa ggcgacgaat acgaagtgcc tgtaaaaggt
    14161 ctgtatgcgg caggtgagtg cgcctgtgct tccgtacacg gtgcgaaccg cttgggtacg
    14221 aactccctgc tggacttagt ggtattcggt aaagctgccg gcgacagcat gattaaattc
    14281 atcaaagagc aaagcgactg gaaacctttg cctgcggatg cgggcgagct gacccgccaa
    14341 cgtatcgagc gtttggacaa tcaaactgat ggtgaaaacg ttgatgcatt gcgccgcgaa
    14401 ctgcaacgct ccgtacaatt gcacgccggc gtgttccgta ctgatgagat tctgagcaaa
    14461 ggcgttcgag aagtcatggc gattgccgag cgtgtgaaac gtaccgaaat caaagacaag
    14521 agcaaagtgt ggaataccgc gcgtatcgag gctttggaat tggataacct aattgaagtg
    14581 gcgaaagcga ctttggtgtc tgccgaagca cgtaaagaat cacgcggtgc gcacgcttca
    14641 gacgaccatc ctgagcgcga tgatgaaaac tggatgaaac atacgctgta ccattcagat
    14701 gccaatacct tgtcctacaa accggtgcac accaagcctt tgagcgtgga atacatcaaa
    14761 ccggccaagc gcgtttattg atgcgttttc agacggtctt cgcctcaaag gtcgtctgaa
    14821 atctaaccat acccacattg aactgcttga atttataata caaaatcatt gggcagttga
    14881 tgagaaaagg aacacttctc atggaaaaaa tgagttttga aatttaccgt tacaacccgg
    14941 atgttgatgc caagccttat atgcagcgtt acgagttgga attggaaccg accgacgtga
    15001 aacttttgga cgctttagtg cgcctgaaag cacaagacga taccttgtct ttccgccgct
    15061 cctgccgcga agggatttgc ggttctgacg gtatgaacat caacggcaaa aacggcttgg
    15121 cgtgtttgac cgatctgcgt ggcttgaaac agccggttaa aattcgtcct ctgccaggtc
    15181 tgcctgttat ccgcgacctg attgtggata tgacccagtt cttcaaacaa taccattccg
    15241 tcaaacctta tgttgtcaac gataatccga ttgatgcgga caaagagcgt ctgcaaactc
    15301 aggaagagcg taaagagttg gacggtttgt acgagtgtat tttgtgcgcc tgctgttcga
    15361 ctgcctgccc gtcattttgg tggaaccctg ataaattcgt cggtccgtcc ggtttgctga
    15421 atgcttaccg tttcattgcg gacagccgtg ataccatcac taatgagcgt ttggataatc
    15481 tgaacgaccc ataccgtttg ttccgttgcc acaccattat gaactgcgta gacgtatgtc
    15541 ctaaacactt gaatccgacc cgagccatcg gtaagattaa agagattatg ttgaaacggg
    15601 ccgtttaaga aatgatggtt tttgacgata ttgccaaacg gaaaatccgt tttcaaaccc
    15661 gccggggatt gttggagtta gatttaatct tcggcaggtt tatggaaaaa gaattcgagc
    15721 atttgagcga taaagagctg tccgagtttt ccgaaatcct tgaatttcaa gatcaagaat
    15781 tgcttgcctt gattaacggg cattcggaaa cggacaaagg gcaccttatc ccgatgcttg
    15841 aaaaaatcag acgggcatga ggcatctgaa atctgcctgc aggcagattt caaaatgcaa
    15901 aagccgtctg agggcaaaga acgtgctgcg gatgcagtaa cgtgggttat aacttgcaaa
    15961 ggagcaataa tatgtccaaa tcaattaaac tcaacgtacc gggtcaggca ggtttggagc
    16021 tgccggtatt ggaagccagc atcgggcacg atgtggttga cattcggggg ctgacaaaaa
    16081 atacaggttt gttttccttc gaccccggat ttgtttcaac cgcaagctgt gagtctaaaa
    16141 ttacttacat cgacggcgat caaggcttgc tttattatcg cggatacccc atcgagcagc
    16201 tggccgaaaa gtccgattat ttggaagtct gctacctgtt gatttacggc gaactgccga
    16261 ctcccgagca aaaggcagaa tttgacaata ccgtccgccg ccacacgatg gtgcatgaac
    16321 agctgacttg gttcttccgg gggttccgcc gcgacgcgca tccgatggcg atgatggtcg
    16381 gcgtggtcgg cgcgctgtct gcgttctacc aagacagctt ggacattagc aatcccgaac
    16441 accgcaaaat cgcgatttac cgcctgattt ccaaaatccc gaccattgcg gcaatgtgct
    16501 accgctattc aaacggtctg ccgttcaatt atccgaagaa taatctttct tattccgaaa
    16561 acttccttca tatgatgttc gccacgccgt gtgaagacta caaacccaat cccgttttgg
    16621 cacgcgcgct cgaccgcatc tttattttgc atgccgacca cgagcaaaac gcctcaactt
    16681 caaccgtccg tctggcaggc tcttcgggtg cgaatccgtt tgcctgtatt gctgccggta
    16741 tcgcctgcct gtggggtgct tcgcacggcg gtgcgaacga agccgtgttg aaaatgttgg
    16801 acgaaatcgg cgatgtgtct aatgttgccg catacatgga aggtgtgaaa caacgcaaat
    16861 accgtctgat gggcttcggt caccgcgtgt accgcaatat ggatccgcgt gccagcatta
    16921 tgcgcgaaac ctgctatgaa gttttgaagg aattgggctt ggaagacagt ccgaaattca
    16981 aactggcgat ggaattggaa cagattgcgc tgaaagaccc gttctttatc gaacgcaaac
    17041 tgtatccaaa cgtcgatttc tattccggca tcgtcctgtc cgcgctgggc atcccgaccg
    17101 aaatgtttac cgtcatcttc gccctgtcgc gcagcgtggg ctggatttcg cactggcacg
    17161 agatgattag cgatccttcg ctgaaaatcg gccgcccgcg ccagctttat accggttcgg
    17221 aacgccgcga ttatgtgccg ccaggcgaga ggtaacatac attaatatat tgtcaaacag
    17281 gcaatatcag agaaccggat tgtttcccga atccgtctga ttgtagtcgg atgaaatcaa
    17341 gacaagcaat ccggtttaaa atagggtaga ataaaatgtc ttttcagacg gcatcagttt
    17401 agccgtcagg acgcggactt ctaccctttg tttatatttt aaagaaaaga gcgcacgcca
    17461 tgatggacga aaaactcaat ttctcttacc tgttcggttc gaacgcaccc tacattgagg
    17521 aattgtacga ggcttttttg gaaaaccccg atgcggttga tgaaaaatgg aagcagtatt
    17581 tcaccgattt gagcaaacag ccggggacgg ttgctgtcga tgtcgcacac acaccgattc
    17641 gcgaatcatt tgttactttg gcgaaaaaga aaattgcatc tgccgttgtg ggcggtgcgg
    17701 atgaggcaat gctgaaaaag caagtcagcg ttttacggct gatttccgcc tatcgtatcc
    17761 aaggcgtggg tgcagcccaa cttgatccgc tcaaacgtat ccccccgcgc gatattgaag
    17821 ccctcgatcc gaaattccac ggtctgtcag atgccgatat ggcgcttcaa ttcaatatgg
    17881 gcgagggcga ttttgccaat cgcggcaaac tgcctttgtc ccaaatcatc agcaacctca
    17941 aacaaaccta ctgcggccac atcgcattgg aatatatcta tattcccaat accgaagagc
    18001 gccgctgggt acgcaattat tttgaaagcg tattgtccac accgcattac aatgccgatc
    18061 aaaaacgccg tatcttgaaa gagatgactg ctgccgaaac tttggaacgt tatctgcata
    18121 ccaaatatgt cggtcagaaa cgtttcggtg tcgaaggcgg cgaaagcgcg attgccggtt
    18181 tgaactacct gattcaaaac gccggtaaag acggcgtgga agaagtcatc atcggtatgg
    18241 cgcaccgtgg ccgtctgaat gttttggtga acattttggg caaaaaaccc ggcgatttgt
    18301 ttgccgaatt tgaaggtcgt gccgaaatca aactgcccag cggcgacgtg aaataccata
    18361 tgggcttcag ctccgatatt gctaccccgc acggcccgat gcatgtttct ttggcgttca
    18421 acccgtcaca cttggaaatc gtcaacccgg tggtggaagg ttctgcgcgc gccaaacaaa
    18481 aacgtttggg cgaaaacggc cgcgacaaag tcttgccggt attgattcac ggcgactccg
    18541 catttatcgg tctgggtgtc aaccaagcaa cattcaacct gtctaaaaca cgcggttata
    18601 ccaccggcgg tacggttcat atcgtcatca acaaccaaat cggctttacc acttccgata
    18661 tccgcgatac ccgttcaacc gtacactgta ccgatatcgc aaaaatggtt tccgccccgg
    18721 ttatccatgt gaacggcgat gatcctgagc gtgtttgctt tgctatccaa gccgctttgg
    18781 attaccgcaa aaaattccat aaagacatcg tgattgacgt tgtctgctac cgtaaatggg
    18841 gtcacaacga gggcgatgat ccgaccttga cccaaccgat gatgtacaaa aaagtatcgc
    18901 aacaccccgg tgcgcgtgct ttgtacaccg agcaactgat tgccgaaggc gtggtaactc
    18961 aagcagaagc tgatgcttac atccaagcct accgtgatgc tttggacaaa ggcgaacatg
    19021 ttgagcaaac aacgttgagc aatttccaac gcacacaaat cgattggagc aaataccaag
    19081 gcaaagattg gcgcgaacac atcgaaaccg gtttgcctgc cgcggatatt gagcgtctta
    19141 ccgagaaatt taccgccgta ccagaaggct ttgccctgca tccgactgca aaacgtgtga
    19201 ttgaagcgcg taaagccatg gcatccggca aacaagccat cgactggggt atggccgaaa
    19261 ccttggcata cgcaagcctt gtaaccaaag gtcatggcgt gcgtatctcc ggtgaggact
    19321 ccggtcgcgg tacgttctcg caccgccatg ccgtattgca cgatcaaaac cgtgaaaaat
    19381 gggacgacgg tacttatgtt cctctgcgcc atatgggcga aggcatgggc gagttcctgg
    19441 ttatcgactc cattttgaac gaagaagcag taatggcgtt cgagtacggc tttgcctgct
    19501 ccgcgcctga caagctgacc atttgggaag ctcaattcgg tgacttcgcc aacggcgcgc
    19561 aagtgacgat tgatcaattc ctgtcgtcag gcgaaaccaa atggggtcgc ttgtgcggtc
    19621 tgaccaccat cctgccgcac ggttacgacg gtcaaggccc tgagcactct tctgcacgcg
    19681 tagaacgttg gttgcaactg tgttctgaga acaatatgca agtcattatg ccgtctgaag
    19741 cgtcgcaaat gttccacctc ttgcaacgtc aagtcttggg ttcataccgc aaaccgctgg
    19801 tgattttcat gtccaaacgc ctgttgcgct tcaaaggtgc aatgagctcg ctggaaaact
    19861 tcaccgaagg ttcgaccttc cgtccggtta tcggcgatac agccgaacgt gcaagcaacg
    19921 acagcgtgaa acgcgtggta ttgtgtgccg gtcaggttta ctatgacttg gaagccggcc
    19981 gtgctgagcg taaactggaa gatgatgtcg ctatcgtccg cgttgagcag ctgtatccgt
    20041 tcccatacga ggaggttaaa gccgaactgg cgaaatatcc gaacgcaaaa tctgtggttt
    20101 gggcacaaga agagccgaaa aaccaaggtg cgttctacca aatccgccac cgcatcgaag
    20161 acgttatcag cgaagagcaa aaactgtctt atgccggtcg tccaagcagc gcatcgcctg
    20221 cagtgggcta ctcaagcaaa catattgccc aattgaaaca attggttgaa gacgctttgg
    20281 cgttgtaagc caagtggcat tccgtctgag gctgctcagg cggaatgccc atatgcagaa
    20341 tgaaaaacac acaacaggcc gtctgaaagg gccattggag acacaaaatg attattgatg
    20401 taaaagtacc tatgctgtct gaaagcgtat ctgaaggcac gctcttggaa tggaagaaaa
    20461 aagttggcga agcagttgcc cgtgacgaaa tcctgatcga tatcgaaacg gacaaagtgg
    20521 ttttggaagt accttctcca caagccggcg tattggttga aatcgtagcg caagacggtg
    20581 aaaccgttgt tgccgaccaa gttttggcac gtatcgatac cgctgctact gccgctgctg
    20641 aagcacctgc cgccgctcct gccgaagcag ccccggccgc cgctcctgct gccgcgcaaa
    20701 acaacgccgc tatgcctgcc gccgccaaac tggctgccga aaccggtgtt gacgtgaacg
    20761 cattgcaagg ttccggccgt gacggtcgcg tattgaaaga agacgtacaa aatgccgctg
    20821 ccaaacctgc cgcagccgct gctcctgccg ttgcacttcc tgccggcgcg cgtcccgaag
    20881 aacgcgtacc gatgagccgc ctgcgtgccc gtgttgcaga acgcctcctg gcttcccaac
    20941 aagaaaacgc cattctgact acattcaacg aagtcaacat gaaaccaatc atggacttgc
    21001 gtgcgaagta caaagaaaaa ttcgagaaag aacacggcgt aaaattgggc tttatgtcct
    21061 tcttcgttaa agccgctgtc gccgccctga aaaaataccc ggttgtgaat gcttctgttg
    21121 acggcaaaga catcgtgtac cacggctact tcgacatcgg tatcgcgatt ggcagcccac
    21181 gcggtttggt tgtgccaatc ctgcgcgatg ccgaccaaat gagcattgcc gacatcgaac
    21241 aagcaattgt tgattacgcg aaaaaagcca aagacggcaa aatcgctatc gaagatctga
    21301 ccggcggtac attcagtatt accaacggcg gtactttcgg ttctatgatg tccaccccga
    21361 tcatcaatcc gcctcaatct gcgattttgg gtatgcacgc cactaaagag cgcgctgtgg
    21421 ttgaaaacgg ccaagttgtt gtccgtccaa tgatgtatct ggctctgtct tacgaccacc
    21481 gtatcatcga tggtcgcgaa gctgtattga ccttggtagc cattaaagat gcgttggaag
    21541 acccggcccg cctgttgttg gatctgtaat tgtttcagac gaccttttat ttgttaatga
    21601 aaaggccgtc tgaattttta tttagatgta gcataatgta gtatcgtgct acaataggct
    21661 caacgaacga ttgaggccgt ctgaaacatt tgattcgaat gaatcgacag atatggactt
    21721 tcagacggtc ttttcttaaa accatcaaaa cgcagtcatt caaaataaaa aagaaacgaa
    21781 aagtatcgtt tttattttga gatactgcaa aagcaaagga tgacacgatg tctcaatatg
    21841 atgtagtagt gattggtgca ggcccgggcg gatacgttgc cgccatccgt gccgcacaac
    21901 tgggtttcaa aactgcctgt gtcgatgcag gcgttaacaa agcaggcaat gcccctgcat
    21961 tgggcggtac ttgcttgaac gtaggttgta tcccttctaa agccctgttg caatccagcg
    22021 aacatttcca cgctgcgcaa cacgattttg ccgaacacgg tatcactgtc ggtgacgtaa
    22081 aattcgacgc ggccaaaatg attgagcgca aagatgccat cgtgaccaaa ctgaccggcg
    22141 gcgtgaaatt cctgttccaa aaaaataaag taaccagtct gttcggtacg gcttcctttg
    22201 ccggtaaaaa tggcgatgct taccaaatcg aagtcgataa caaaggagag aaaaccgtta
    22261 tcgaagccaa acacgtcatc gtagcgaccg gttccgtacc gcgtccgctg ccacaagtcg
    22321 ctatcgacaa tgtgaacgta ttggacaacg aaggcgcatt gaacctgacc gaagtacctg
    22381 ccaaactcgg cgtgatcggt tccggtgtga ttggtttgga aatgggttcc gtatggaacc
    22441 gcgtgggtgc ggaagttacc attcttgaag ccgcgccgac cttcctggct gccgccgacc
    22501 aacaaatcgc caaagaagcc ttcaaatact tcaccaaaga gcaaggtctg agcatcgaat
    22561 tgggcgtgaa aatcggcgac atcaagtctg aaggcaaagg tgtttccgtt gcttacgaaa
    22621 ctgctgccgg cgaagccaaa accgaagtat tcgacaaact gatcgttgcc atcggccgta
    22681 ttccaaacac caaaggcctg aacgcggaag ccgtaggctt ggaaaaagac gagcgcggct
    22741 ttatcaaagt agatggcgaa tgccgtacca acctgcctaa cgtatgggca atcggcgacg
    22801 tggttcgcgg cccgatgttg gcacacaaag ccagcgacga aggcgttgcc gttgccgaac
    22861 gcattgccgg tcaaaaaccg catatcgact tcaacaacgt accgttcgtg atttacaccg
    22921 atcctgaaat cgcttgggtg ggtaaaaccg aagagcagct caaagccgaa ggcgtggagt
    22981 acaaaaaagg tacttcaggt tttggtgcga atggtcgcgc attggcaatg ggcaaagcca
    23041 aaggtacggt taaagtgttg gcagacgcca aaaccgaccg catcttgggc gtacacatga
    23101 ttggtccggt tgtcagcgaa ttgcttaccg aaggcgtgac tgcgctcgaa ttcttcgcca
    23161 gcagcgaaga catcgcccgc attatccatg cccacccaac cttgtccgaa gtggttcacg
    23221 aagctgcatt ggcggccgac aaacgcgctt tgcacggttg atagacatta aggcctccga
    23281 caaattgaat gttccgagag cttcgttttc tgatttataa ttccgtcaga caaacaaaca
    23341 gcatttacat tcgttatgaa caaagaaata gtcggtattt tctttatacc ggcgggcatc
    23401 atcagcatgt gtatggccgc attgtggcag atgtatgtga tgatgaccga aacttatacg
    23461 ctcaaccgtt tcaaagataa agaattggtt tggcgcgtgg cattgttgtt tatcagtttc
    23521 agccttgccg tttatctgct ctgtccgaat tcgcgtaaaa aaggcatcgt cttttttatt
    23581 ctcgggggag gcggtgcagc catgtatctg ctggcgcgga tgtggttgcc tttcagcaag
    23641 tgaaacgacg attttccgac cgccgaaagg tagtctgaaa cgcacgggct tgccatttgg
    23701 aggcaaactc ggggcattcc actaatctaa aggagaaatc catgaattta cacgagtatc
    23761 aggctaaaga actgctggct agctacggtt tgcccgtaca aggcggtatt ttggcacaca
    23821 acggcgaaga agccgctgca gcttacgaca aattgggcgg caaattcgct gttgtcaaag
    23881 cacaagtaca cgccggcggc cgcggtaaag cgggcggcgt aaaagtcgtt aaaagccgcg
    23941 aagaagctaa agaagtggct gaaagcctga ttggcaccaa cttggtaact taccaaaccg
    24001 atgccaacgg ccaacctgtc aacagcgttt tggtttgcga agatatgtat ccggttcaaa
    24061 ccgagctgta cttgggcgca gtggttgacc gttctacccg ccgcgttaca ttcatggctt
    24121 ctaccgaagg cggtgtggaa atcgaaaaag ttgctgccga aactccagaa aaaatcttca
    24181 aagtaaccgt tgatccgctg gtcggcctgc aaccttgcca agctcgcgaa gttgccttcc
    24241 aactgggctt gaaagacaaa caaatcaacg agttcgtcaa actgatgacc ggtgcgtaca
    24301 aagcgtttgt cgaaaatgac ttcgccctgt ttgaagtcaa cccgctggca gttcgcgaaa
    24361 acggcgcgct cgcctgcgtg gacggcaaaa tcggcatcga cagcaacgcg ctctaccgcc
    24421 tgccgaaaat cgccgaattg cgcgacaaat ctcaagaaaa cgaacgcgag ttgaaagctt
    24481 ctgaatttga cctgaactat gttgccctgg aaggcaacat cggctgtatg gtgaacggtg
    24541 ccggtttggc gatggccact atggacatca tcaaactgaa aggcggccaa cctgccaact
    24601 tcttggacgt tggcggcggc gcaaccaaag accgcgtggt tgaagcgttc aaactgattc
    24661 tggaagacaa atccgttcaa ggcgtattga tcaacatctt cggcggtatc gtacgttgcg
    24721 acatgattgc ggaagccatc gtggcagccg ttaaagaaat caacgtcaac gttcctgtcg
    24781 ttgttcgttt ggaaggcaac aacgccgaac tcggcgcgaa aatcctgaac gaatcaggtc
    24841 tgaaactgac ttctgcagac ggcctgaatg acgcagccga aaaaattgtt gcagccgtaa
    24901 acgcctaagg agaaaagaat gagcgtattg attaataaag acactaaagt attggttcaa
    24961 ggtttcaccg gtaaaaacgg tactttccac tccgaacaag ctctggctta cggcactaaa
    25021 gttgtcggcg gcgttacccc gggcaaaggc ggtcaaaccc acctgaacct gcccgtgttc
    25081 aacaccatga aagaagccgt taaagaaacc ggcgcggatg catccgtgat ttacgttcct
    25141 gctccgtttg tgttggattc tatcgttgaa gcagttgatt caggcgtagg cttggtcgtt
    25201 gtgattaccg aaggcgtgcc gactttggac atgctcaaag ccaaacgcta cttggaaacc
    25261 aacggtaacg gaacacgttt ggtcggccct aactgcccgg gcgtgattac tccgggcgag
    25321 tgcaaaatcg gcattatgcc gggccacatc catactcccg gccgcatcgg catcatttcc
    25381 cgttccggta cattgactta cgaagccgtg gcacaaacca ccaaactggg cttgggtcaa
    25441 tcaacctgta tcggtatcgg cggcgacccg attccgggta tgaaccaaat cgacgcactg
    25501 aaacttttcc aagaagaccc ggataccgac gccatcatca tgatcggtga aattggcggt
    25561 actgcggaag aagaagcagc cgaatacatc caatccaacg taagcaaacc tgttgtcggc
    25621 tatatcgccg gtgttaccgc acctaaaggc aaacgcatgg gtcacgccgg tgcgattatc
    25681 tccggcggca aaggtactgc ggaagaaaaa ttcgccgctt tcgaaaaagc cggtatcgct
    25741 tacacccgca gccctgccga gttgggcact accatgctgg aagtgttgaa agcaaaaggt
    25801 ttggcataat caggtttgac aactgattga acatcaaatg ccgtctgaaa ccggaaatcg
    25861 ggtttcagac ggcattttgt ttgtcatttc aaaaagaggc agcctcaaca tacccacatt
    25921 atttttgccc ttttggggca gtcagagacc tttgcaaaat tccccaaaat cccctaaatt
    25981 cccaccaaga catttagggg attttgggga attttgcaaa ggtctcgggc taagtgtgcc
    26041 tgtttgcgcc taaaaggcgg cccggatgcc tgattatcgg gtatcctggg aggattaagg
    26101 gggtattggg gtaaaattag tggatatttg aaacgaaaac agccgaaaac ctgtgtttgg
    26161 gtttcggctg tcgggaggga aaggaatttt gcaaagctct cgtattggct ttgaagttcc
    26221 gtgtaattca caggtagggc gtgtggcaca gccacgcacg cggtcggttg ggtatgcagg
    26281 ctacggcttt ctctgttgaa actgcaacac gtcagctacc aaccgtgtgc gtagcgcaca
    26341 cggttggttg ggatacaagt tactgtttgt tcttaaatgg agtaccaaca tcaagggctt
    26401 ttgataatcc tgaaaatatt aaatattcag tttcagtttt tattttagga gaaatatttg
    26461 cataatttct atctttaaag caccaatgga tatatggttt cgtttcatct tctgggttat
    26521 ctaaataagc aataacattc aagtcaaata aaaattgcaa aaactcatta gcagtactca
    26581 taaatttagg tatttccact gatgttgttt gtaagtgctt tttcaaacgt tcaaatgctt
    26641 ttaaaaaatc actatattta aatctatctt tcccgtttaa aaattcaaaa aatttcagga
    26701 aattttgata atcactttga ctataataaa acaaaagatg atctttgatt tcaccaagta
    26761 aatatatcga gtattctctt tgaaaagaag tattatcaaa atcttctgct acgacataat
    26821 cttccttact tttcttattt ttttgtagca aagtaagcat ctgaagaata tcgcgaggtc
    26881 gataatacga ttttcttagg aagctaataa atgaagttaa atttttatac tcatcatgta
    26941 aattaggagc attccatgga aaataataat cccatgagtt gcctttttct aaactatctt
    27001 gtttttcttg ctgggttctc aaaagatgat caaaaacgcc aaaaatcttt gaacttctat
    27061 aagatttata atccgtcctc cagtctaaaa atactgaatt atcttgaagt ttggtatttt
    27121 gattttgtaa acctaatgaa tcaaagatat caggtctaat caataacaca actctcatcc
    27181 ttcccttact atctttaatg gaagggaaga tatcattatt taacatccat atggcgttag
    27241 caagaccttt tacacactca tgatattcat caaatggaat ctgtgatggt ctaatatcta
    27301 tcccatcaat aaacaaaata tgattatctt ttagctttaa ctgagataaa gcatctttaa
    27361 attttctttc aataaaacct aaatttgctt ggaatttact ttctgtaaaa gttatttgtt
    27421 gggattcctc ttcacctagt ttaacaaatt ttccaaaaat catttccgca gcttcttttg
    27481 aattttctat taaagttatt gcttgtacaa tttccggatc aaaagcgcca taataatatt
    27541 catttatagc ctcatctaag gctttaaatt tattaaatat tgaagataat attccgtttt
    27601 ctttacattt gatttgattt gatatcaaca gatataaaat gactttccaa atacttgtaa
    27661 aatctgaaac agttaagtgt cttgctttct ttagctgaat aaattttgaa taatcggttt
    27721 cacgaacaaa cttagtagtg gcatgtatgt ttttatagaa gttattagtt aaataaacag
    27781 catatgctgt ctttccagtt cccttttctc cgattaaaaa cgaaatattt ggttcacata
    27841 attcatccaa atattctcct tttacaaata ttcggttaaa taaatcttta ttttctcttc
    27901 ttctgtagtt tgcagcatcc acaaatccaa attctaatgt ttttaacggt ttcatcttaa
    27961 taatctccta tttaattttg aattaaactt acctcaaaac caccttcaaa tacttcccag
    28021 tataactccc cttaactttc gccacctgtt caggactacc tttagcaata atcctccccc
    28081 cgccatctcc gccttccggc cccaagtcca caatccaatc cgctgtttta atcacatcca
    28141 gattatgctc gataatcact atcgagttgc ctttgccttt cagacggcct atgacttcca
    28201 gtagcagggc gatgtcggcg aagtgcaggc cggtggtggg ttcgtcgagg atataaagtg
    28261 ttctgccggt gtcgcgtttg gagagttcca aggcgagttt gacgcgttgg gcttcgccgc
    28321 cggagagggt ggtggcggac tggccgaggc ggatgtagcc caggcctacg tccatcaggg
    28381 tttgcagttt gcgcgatacg gtggggacgg cgtcgaaaaa ttcgcgggct tcttcgacgg
    28441 tcatgtcgag gacttggctg atgtttttgc ctttgtattg gatttcgagg gtttcgcggt
    28501 tgtagcgttt gccgtggcag acttcgcagg ggacgtacac gtcgggcagg aagtgcattt
    28561 cgactttaat cacgccgtcg ccttggcagg cttcgcagcg gccgcctttg acgttgaagg
    28621 agaatctgcc gacgttgtag ccgcgttcgc gcgagagggg tacgccggcg aagagttcgc
    28681 ggatgggggt gaacaggccg gtgtaggtgg cggggttgga gcgcggggtg cgaccgatgg
    28741 gggattggtc gacgttgatg actttgtcga ggtgttcgag gccgcggatg tcgtcgtatg
    28801 gggcgggttc ttcttgggcg cggttgagtt cgcgggcagt gattttggcg agggtgtcgt
    28861 taatcagggt ggatttgccg ctgccggata cgccggtgat gcaggtaatc aaaccgagcg
    28921 gcagctcaag ggtaacgttt ttgaggttgt tgccgcgcgc gcctttgagg acgagcattc
    28981 gttcgggatt gacgggcgtg cgttcagacg gcacggcaat ggattttttg ccgctgaggt
    29041 attgtccggt aacggagttt tcgcatttgg cgacgttttc gggcgtgtcg gcaatcaata
    29101 cgttgccgcc gtgttcgcct gcgcccgggc ccatatcgac gacgaaatcg gcttcgcgga
    29161 tggcgtcttc gtcgtgttcg accacgatga cgctgttgcc caaatcgcgc aggcgtttga
    29221 gggtggcaag caggcggtcg ttgtcgcgct ggtgcaggcc gatggagggt tcgtccaaaa
    29281 cgtacatcac gccggtcagg ccgctgccga tttggctggc gaggcggatg cgctgggctt
    29341 cgccgccgga aagggtttcg gcggaacggg agagattcag gtaatccagc ccgacattaa
    29401 tcaaaaagcc gagacgttcg gtgatttctt tgaggatttt ttcggcgatt tgttttttgt
    29461 tgccgtccaa atccagcgtt tcaaagaatc ggtgggtttt ggtcagcggc caggcggaga
    29521 cttcgtgcag cggttcgccg ctgacgtaaa cgtagcgggc ttctttgcgc aaacgtgcac
    29581 caccgcagct cgggcaggcg cggtggtttt ggtattcgcg cagtttttcg cgcacggttt
    29641 cgctgtcggt ttcgcggtag cggcgttcga gattggggat gatgccttcg aaggcatggc
    29701 tgcggttgaa ggtagtgccg cgttcggata ggtaggtgaa atcaatcact tcctttcccg
    29761 aaccgtgcag gatgactttt ttgacttttt caggcagcgt ttcccaagca gcctgcacat
    29821 cgaaaccgta atgccgcgcc agcgactgaa tcatttggaa atagaactgg ttgcgcttgt
    29881 cccaaccgtc aatcgcgccc gttgccaacg acagttcggg atgggcgact actttttcgg
    29941 ggtcgaagaa attggtgttg cctaagccgt cgcaagtcgg gcaggagccc atcgggttgt
    30001 tgaaggaaaa gaggcgcggc tctaattcag gcaggctgta tgaacacacg gggcaggcga
    30061 aacgcgcgga aaaccaatgc tcttcgccgc tgtccatctc cattgccagc gcgcgctcgt
    30121 tgccgtggcg cagcgcggtt tcaaaacttt ccgccagccg ctgcttgatg tccgccttca
    30181 ctttcacgcg gtcgatgacc acgtcgatgt tgtgcttgat gtttttttcc agcttcggca
    30241 cttcgtcaag ctgatagacc tcgccgtcca cgcgcacccg cgcaaaaccc tgcgcctgca
    30301 agtcggcaaa gaaatcgaca aactcgccct tacgctcgcg cacggtgggg gcaagaatca
    30361 tcacacgcgt gtcttccggc agtttcaata cggcatcgac catctgcgat acggtttggc
    30421 tcgacagcgg cagcttgtgt tcgggacaat acggggtacc gacacgggcg tataaaagac
    30481 gcagatagtc gtggatttca gttaccgtac cgacggtgga gcgtgggttg tggctggtgg
    30541 atttttgctc gatggaaatt gcaggcgaca gaccttcaat taaatcgaca tcgggtttgt
    30601 ccatcatctg caaaaactgc cgcgcatagg cggaaaggct ctcgacataa cgccgttgcc
    30661 cttcggcata cagcgtgtca aacgccagcg acgacttgcc gctgcccgac aatcctgtta
    30721 ccaccacgag tttgtggcgc ggaatgtcta aatcgatgtt tttcaaatta tgcgtgcgcg
    30781 cgccgcggat gcggatggtg tcgttgtcgt gcgaatgttg gggatgatgg ttgcacataa
    30841 tggatgccgc ctgaaaaata aaggaaaacc ggtattgtag cactttctcg gatgccgtct
    30901 gaagccgcgt tcagacggca tttgccagcg gagtacggca gattccgcta taatgtcggc
    30961 aattttaacc cgcttgaaca aaaggatgac aaatgaaccg tctttacccc cacccgatta
    31021 tcgcccgtga gggctggccg attattggcg gcggtttggc tttgagcctg ctggtgtcga
    31081 tatgttgcgg ctggtggtct ttgccgtttt gggtgtttac cgtatttgca ttgcagtttt
    31141 tccgcgaccc tgcgcgtgag attccgctaa atcctgaagc ggtgttgagc ccggttgacg
    31201 gccgtatcgt ggtggtcgaa cgcgcacgcg atccgtatcg tgatgtcgat gctttgaaaa
    31261 tcagtatttt tatgaacgtg ttcaacgtgc attcgcaaaa atcgcctgcc gattgtacgg
    31321 taacgaaagt ggtctataac aaaggcaaat tcgtgaatgc ggatttggac aaagccagca
    31381 cggaaaacga acgtaatgcg gtgttggcga ctacggcttc aggtcgtgaa attacttttg
    31441 ttcaagtggc cggtttggtg gcgcgccgta ttttgtgcta cacccaagca ggtgcgaaac
    31501 tgtctcgcgg cgaacgctat ggctttatcc gttttggctc gcgcgtggat atgtatctgc
    31561 ctgtcgatgc gcaggcgcaa gtggcgattg gcgataaagt aaacggcgtc agcactgtat
    31621 tggcgcgttt gccgctgact gcgccgcaaa tcgaatccga gcctgaatct gagccagctt
    31681 cacaagcggc ttcggttgaa acagcggcaa acccatctgc cgaacaacgg caaattgaag
    31741 caacggcggc taagattcaa gcggctgtgc aagatgtgtt gaaagattaa ttttgcgaac
    31801 taaaatagaa aatatcagta ccatcattca cacgaatgag gaagtttggt tttttgaatt
    31861 tttgctaatg ttcacaccgt tatgttcacg aaaatgggaa tccgggaact taacgttaca
    31921 gtgatttatc ggaaacggct gaaaccgaac gaattggatt cccgcctgcg cgggaatgac
    31981 gactcattag ttacctaaaa cttaaaaaaa acagaaacct ttccgcgtca ttcccatgaa
    32041 agtgggaatc tagaacccaa atgctaaggc gatttatcgg aaacggctga aaacgaagag
    32101 actggattcc cgcctgcgcg ggaatgacga cttattagt
//
LOCUS       DAXHRP010000005        30575 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.005, whole genome shotgun sequence.
ACCESSION   DAXHRP010000005 DAXHRP010000000
VERSION     DAXHRP010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30575
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.005"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..77)
                     /locus_tag="ACFM72_000152"
     CDS             complement(<1..77)
                     /locus_tag="ACFM72_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC6256796.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTART"
     gene            complement(234..2984)
                     /gene="gyrA"
                     /locus_tag="ACFM72_000153"
     CDS             complement(234..2984)
                     /gene="gyrA"
                     /locus_tag="ACFM72_000153"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HFC6256797.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            complement(3082..3582)
                     /gene="hscB"
                     /locus_tag="ACFM72_000154"
     CDS             complement(3082..3582)
                     /gene="hscB"
                     /locus_tag="ACFM72_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HFC6256798.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            3664..3885
                     /locus_tag="ACFM72_000155"
     CDS             3664..3885
                     /locus_tag="ACFM72_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HFC6256799.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKHGSFRRSRRSL"
     gene            complement(3845..4165)
                     /gene="iscA"
                     /locus_tag="ACFM72_000156"
     CDS             complement(3845..4165)
                     /gene="iscA"
                     /locus_tag="ACFM72_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HFC6256800.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(4252..4638)
                     /gene="iscU"
                     /locus_tag="ACFM72_000157"
     CDS             complement(4252..4638)
                     /gene="iscU"
                     /locus_tag="ACFM72_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HFC6256801.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            complement(4704..4832)
                     /locus_tag="ACFM72_000158"
     CDS             complement(4704..4832)
                     /locus_tag="ACFM72_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256802.1"
                     /translation="MNEQDLDLDNLDNLLDDFDGVTVEGGVDSENDDGCEGGACKI"
     gene            complement(4899..6113)
                     /locus_tag="ACFM72_000159"
     CDS             complement(4899..6113)
                     /locus_tag="ACFM72_000159"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HFC6256803.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKVDLLSMSGHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            complement(6142..6588)
                     /gene="iscR"
                     /locus_tag="ACFM72_000160"
     CDS             complement(6142..6588)
                     /gene="iscR"
                     /locus_tag="ACFM72_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HFC6256804.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            6879..8051
                     /locus_tag="ACFM72_000161"
     CDS             6879..8051
                     /locus_tag="ACFM72_000161"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HFC6256805.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            complement(8195..10975)
                     /locus_tag="ACFM72_000162"
     CDS             complement(8195..10975)
                     /locus_tag="ACFM72_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFC6256806.1"
                     /translation="MANNKMLFEVIENRKAVYLEDGDDEKCRLPEFVERNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIGSTHAKFLFTEKILQGDTVIPIRKVEMFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQGELDLEKEIND
                     RTSNAEIERKGWEHMVLELLLNKNGNPSENVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYSAFLNWAENVQADDFEFLDTFSGSLNNSDNANEQGKTRTEQALKFMQENG
                     FEFAHLANWVKQNYQKHNVIITNSETNKNKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFAANKDFRELLIWANKKIPNPNAKTNNANSLQANPQTLSFQVHGNQLLQETQ
                     FTADENDEKVKQLGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLN
                     IQNRNELQNNLLKDWQIEFLGLGQDKQVRPDDKLAGCLKILEMVEKHLNESDMPFIGT
                     KEFTPKTLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISARL
                     GDLKSQYDIHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFI
                     EPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTES
                     FPLGAASLEKMK"
     gene            complement(10965..12323)
                     /locus_tag="ACFM72_000163"
     CDS             complement(10965..12323)
                     /locus_tag="ACFM72_000163"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC6256807.1"
                     /translation="MKLIYIDPPYNTGNDGFKYNDKFNHSTWLTFMKNRLEIAKELLM
                     KDGSIFVSIDDNEQAYLKILMDEVFGNENFICNFIWEKKTGASDAKQIATITEFVLCY
                     SKNFKTVKLNKNTFSYDTERYKLSDKFEQERGKYYIDNLDRGGLQYSDSLNFAIQCPD
                     GTFTYPNGRTEFVNDGWIWKWSKNKIDWAITNGFLEFRKSKSKKSGWSVCYKNYMLVD
                     NENKPIERSAPYKNLIQDILNTHATDELKKLFGSKVFTTPKPESLLQYLIQIATSESD
                     IVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQ
                     GGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSINEFSQTIQE
                     PEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQTEKKD
                     GE"
     gene            complement(12551..13027)
                     /locus_tag="ACFM72_000164"
     CDS             complement(12551..13027)
                     /locus_tag="ACFM72_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC6256808.1"
                     /translation="MKTDIQTELTQALLPHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLSNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDSNRFL
                     KDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNSQPASQPASQPASQPANYTLN"
     gene            complement(13244..14167)
                     /gene="truB"
                     /locus_tag="ACFM72_000165"
     CDS             complement(13244..14167)
                     /gene="truB"
                     /locus_tag="ACFM72_000165"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HFC6256809.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKARYITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVSHFPQTVLNDYAVHMLHCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(14200..14571)
                     /gene="rbfA"
                     /locus_tag="ACFM72_000166"
     CDS             complement(14200..14571)
                     /gene="rbfA"
                     /locus_tag="ACFM72_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HFC6256810.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            14762..16006
                     /gene="clpX"
                     /locus_tag="ACFM72_000167"
     CDS             14762..16006
                     /gene="clpX"
                     /locus_tag="ACFM72_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HFC6256811.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            complement(16109..17305)
                     /locus_tag="ACFM72_000168"
     CDS             complement(16109..17305)
                     /locus_tag="ACFM72_000168"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HFC6256812.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTKGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGSEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGIVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLCRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            17709..18209
                     /locus_tag="ACFM72_000169"
     CDS             17709..18209
                     /locus_tag="ACFM72_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256813.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            18294..18848
                     /locus_tag="ACFM72_000170"
     CDS             18294..18848
                     /locus_tag="ACFM72_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256814.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            18862..19062
                     /locus_tag="ACFM72_000171"
     CDS             18862..19062
                     /locus_tag="ACFM72_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256815.1"
                     /translation="MPSEELSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
     gene            complement(19337..20725)
                     /locus_tag="ACFM72_000172"
     CDS             complement(19337..20725)
                     /locus_tag="ACFM72_000172"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC6256816.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPTDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
     gene            21054..22001
                     /locus_tag="ACFM72_000173"
     CDS             21054..22001
                     /locus_tag="ACFM72_000173"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC6256817.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            complement(22054..22386)
                     /gene="trxA"
                     /locus_tag="ACFM72_000174"
     CDS             complement(22054..22386)
                     /gene="trxA"
                     /locus_tag="ACFM72_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HFC6256818.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            22684..23157
                     /gene="dnrN"
                     /locus_tag="ACFM72_000175"
     CDS             22684..23157
                     /gene="dnrN"
                     /locus_tag="ACFM72_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HFC6256819.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAELLAYMQNELLMHMMKEERMLFPMINQGVGRGATMPISVMMHEHEEHD
                     RAIARLKELTDNFQAPEGACGSWTRLYVLTKEMVDDLNDHIHLENDILFARVLDS"
     gene            complement(23228..24049)
                     /gene="nadE"
                     /locus_tag="ACFM72_000176"
     CDS             complement(23228..24049)
                     /gene="nadE"
                     /locus_tag="ACFM72_000176"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HFC6256820.1"
                     /translation="MMRIFSTGGKMDTQAVITHIARWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRPTLLLDMPIRQHPGQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGTHQTAFANQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            24246..25601
                     /gene="xseA"
                     /locus_tag="ACFM72_000177"
     CDS             24246..25601
                     /gene="xseA"
                     /locus_tag="ACFM72_000177"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HFC6256821.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAVRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIESCTVPVVSGVGHETDFTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQ
                     AQCRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRT
                     HTARFERQTQALKHCRPDVSVCKKNIDRFQTALSHAFHQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            25894..27435
                     /locus_tag="ACFM72_000178"
     CDS             25894..27435
                     /locus_tag="ACFM72_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HFC6256822.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNTFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(27504..28553)
                     /locus_tag="ACFM72_000179"
     CDS             complement(27504..28553)
                     /locus_tag="ACFM72_000179"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC6256823.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKDETGKTASQPY
                     GQKASDGIKPQNVPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWITNGWITVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRIGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(28562..28751)
                     /locus_tag="ACFM72_000180"
                     /pseudo
     CDS             complement(28562..28751)
                     /locus_tag="ACFM72_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424398.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            28778..29410
                     /gene="pdxH"
                     /locus_tag="ACFM72_000181"
     CDS             28778..29410
                     /gene="pdxH"
                     /locus_tag="ACFM72_000181"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HFC6256824.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLLEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            complement(29540..30550)
                     /locus_tag="ACFM72_000182"
     CDS             complement(29540..30550)
                     /locus_tag="ACFM72_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HFC6256825.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLTAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMGGHSEQALSEAEKAQGKILMCCTTAQSDININIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANLPDQEGILE
                     LHIRRHENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQGSNRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRNGHVQDIAAQDHPDLSEYEVFACGSPAMTEQTKNLFVQQHKLPENLFFSDAFTPS
                     AS"
BASE COUNT         6828 a         7462 c         8156 g         8129 t
ORIGIN      
        1 gttcttgcag ttacacctgc gacaaacagt tcaatgagtt tattttgttt ataccggctt
       61 agacgacttt ttctcatagg ggcaactcta acttaatttg aatttcccta gttatctagg
      121 acagcccctt gtttttaatt gactataatc cgctatattg tgagaagctg gatgacggat
      181 gagggataaa ataaatgccg tctgaatctt cagacggcat cgggagatga ttttcagttc
      241 tcgacttccg gttcggttac attggaaatt acagaagcgt cggagagttc ggattcgtct
      301 tcggcaacac gttccagcga taccaaggtt tcgccttcgt ccaagttaat cagtttcacg
      361 cctgctgcgg cgcggccggt ttcgcggatt tgttcgactt tggtgcggat aagtacgccg
      421 ccgctggtaa tcagcatcaa atcgtcggtt tcgccgacca aggttgcggc gaccaaatcg
      481 ccgtttcgct cgccagtgtt aatggcaata ttgccttgcc cgcctttgtt tttgcggctg
      541 taatcggcaa tcggggtgcg ttttccgtat ccgttggcgg tggcggttaa aacttgcaaa
      601 ccgctttctt cggtttcagg ggcgaaggta atcaggctga cgattttgcc gtcggcaggc
      661 aggcgcatac cgcgcaaacc gccgctgccg cgaccggacg ggcgaacacc gtgtttgccg
      721 ctcggcagtg cgttttcgct gtcggcggtt tcatcttcga tgccgtctga aatttcggtt
      781 tcgatgtcgg catcttccgc ttcgtcgttg ccggattttt cccagtattc gttgaagcgg
      841 atggctttac ctaagttgga gaacagcatg atgtcgtccg caccgcctgt ttgcgcagcg
      901 ccgacgaggt agtcgccttc tttgagcgcg atggctttaa tgccttgggc gcggacgttt
      961 ttaaaggcgg aaagttggac ttttttcacc attccctgcg cggtggcgaa gaagacgtat
     1021 tggtcttcgg ggaactcgcg tactgccaga atcgcgctga ctttttcgcc ttcttccaac
     1081 tggatgacgt tgttaatcgg acggccgcgg ctgttgcgtc cgccttcggg cagtttgtaa
     1141 accttaatcc aatgacactt gcccaaattg gtaaagcaca tcaaataatc atgcgtgttg
     1201 gcaacaaaca gggtttcgat aaagtcttcg tctttggtgg cagccgcctg tttgccgcgc
     1261 ccgccgcgac gctgcgcctg atagtcggtg gtcggctggg ttttgatata gccgccatgt
     1321 gtcagggtaa cgaccatttc gcgttgcgga atcaggtctt catcggcaat gtcgccgccg
     1381 aacgggttga tttcgctgcg gcgttcgtcg ccatagttgg ttttgatttc ttccagttcg
     1441 tcgcggatga tttgggtaat gcgttcgggt ttggagagga tatccacaaa gtcgatgatt
     1501 ttacccatca ggtttttgta gctttcgaca atttcttctt gatcgaggcc ggtcaggttt
     1561 cgcaggctca tgcgtaaaat agcatctgcc tgaatctcgc tcaggtaata accttgctct
     1621 ttcaagccga tgtttgcagc caatccttcc ggacgcatca tttccaaatc cagaccggaa
     1681 cgcgtcagca tttcttcaac gaggctgctg cgccaagggc gcgcaagcag tttgtctttg
     1741 gcctcggctg cgttgggcga ttctttgatg agcttgatga tttcatcgat attggacagt
     1801 gcgacggctt tgccttcggc aatatgccct tcatggcgtg ccttcttcag ccggaaaagc
     1861 gtacgtcggg taacgacttc gcggcggtgg cgcaggaatt cggagagaat ctgtttcagg
     1921 ttcaacaggc gcggttgtcc gtcgaccaaa accaccatat tgatgccgaa actgtcttgc
     1981 agcggagtca gtttgtagag ttggtttaag acgacttcgg cattttcgtt gcgtttcagc
     2041 tcgataacga cgcgcatacc ggatttgtcg gattcgtcgc ggagctcgga aatgccttcc
     2101 agtgtttttt cccgaaccaa atcgccgatt ttctcgacca gcttggcttt gttgacctga
     2161 taggggattt cgtcgataac gatggcttcg cgttcgccgt ttctgcctat gggttcgata
     2221 tgggtcttac cgcgcataac gacgcggccg cggcctgttt tatagccttc gcgcacgccg
     2281 ctcaagccgt agatggttgc cccggtcggg aagtcggggg cttggataat gtcgatcagt
     2341 tcgtcgattt cggtgtcggg tgcatcgagc aggcgcaggc aggcattgac ggtatcggaa
     2401 aggttgtgcg gcgggatatt ggtcgccatg ccgacggcga tgccggacga gccgttgacg
     2461 agcagtgtgg ggaaacgggt cggcagtaca agcggctcgt gttcgctacc gtcgtagttc
     2521 gggccgaaat tgacggtttc ttcctcaatg tctgccagca tttcgtggga aattttcgcc
     2581 atgcggattt cggtgtagcg catggctgcg gcggcaagcc cgtccaccga tccgaagttg
     2641 ccctgtccgt ctatcagcac ataacgcata gcgaaatttt gcgccatacg gacgatggtg
     2701 tcgtatacgg cggtatcgcc gtgggggtgg tatttaccga tgacgtcgcc gacgatgcgc
     2761 gccgattttt tgtaggcggc attccagttg tttttcaatt cgtgcatcgc gtacagtacg
     2821 cggcggtgta ccggcttgag accgtcgcga acgtccggca gcgcacgccc gacaatgacg
     2881 ctcatggcgt agtcgagata gcttttgcgc atttcgtctt caaggcttac cggcagggtt
     2941 tcgagggcga atttgtggtc gtggcggatg gttgcgtcgg tcatggtttc aatgtttcgt
     3001 atggcaaaaa attgttgctt attttagcat attttgacgc ggaacggtgc ggcggttacg
     3061 ccgtctgaaa cacggtgcgg attataatgc cgaggaaatt tcgttgcgga gtttgtcgag
     3121 aaacctgcct tggcggactt gttgtgcggc tgtgtcgtaa tcttgtcggg caaacgactg
     3181 tttcagaccg cagaacagtt tttcttgttc gtcgcggatt tcgttgtcga gatttttcaa
     3241 ggattcaagg tcgttgcctg cccgtgcctc catcagcgtt tcgcgccatt ccatttgctg
     3301 cataaggaat tcgggggcga aagcggtatg ctccggcgcg tcggcatcga tgcccgatgt
     3361 tttcagcagg taggcggcgc ggtcgatggg gtttttcaag gtgcggtagg catcgttgat
     3421 ggtggaagac atcatcactg cctgcttttg ctcaaaggcg gaagctgaag cgaatttatc
     3481 gggatggaaa cgggcggcca aggcgcggta ggtttgttcc aagttttcgg tgtcgatatc
     3541 gaaagcgggt tcaatccgga agagggtgaa atattgggac atagtagaat gataaatgta
     3601 agattttggc agaaaactgt ttttgcctta taatctgctg catcttaagc aaaaggactg
     3661 aatatgggcg gcaaagtgca gcacaataaa ggcaaaatac gcgacaatgc tttaaaagcc
     3721 ttagtgaaat ccgatttgtt ccggcacaag gtggaacgga aaaggaaagg caaaggcagc
     3781 tacaacaggc aggaagcgaa aaaatggcgg gacggttttg atacggtccc gccattttta
     3841 tgtcttaaac atggaagctt tcgccgcagc cgcaggagtc tttgacattg gggttttcaa
     3901 atttgaaacc ttcctgtaaa ccttctttgg tgtaatcgac ttgtgtgccg tccagataaa
     3961 ccaggctttt cgggtcgata taaatgcgtg cgccgtgtcc ttcgaaaatc aggtcgtcgc
     4021 catcggcttc atcgacaaat tcaaggttgt acgccatccc cgagcagccg ctggttttca
     4081 cacccaagcg tacgcccaag cctttgccgc gtttggcgag atagtcattg atgtgttttg
     4141 cggcattctc ggtaagggta atcatatttc ttccttgttg tatcgccccg gacagacccg
     4201 aagcggcggg cggttcggac ggcattgcgg gacgatgccg tctgaagggc tttatctgtt
     4261 ttcctgacgt ttgcggtagt cggcaacggc cgcttttacc gcgtcttccg ctaagatgga
     4321 gcagtggatt tttaccggcg gcagttccaa ctcctcggcg atttcgctgt ttttgattgc
     4381 cagcgcgtca tccaggcttt tgcctttgac ccactcggta atcaggctgg acgaagcgat
     4441 ggcggaaccg cagccgtaag ttttgaattt cgcatcttcg atgatgcctt catcgttcac
     4501 tttgatttgc aggcgcatca cgtcgccgca ggccggtgcg ccgaccatgc cggtgccgac
     4561 agattcgtcg tttttgtcga aagtaccgac gttgcgggga ttttcgtagt ggtcgattac
     4621 tttatcgctg tatgccatga tgtggtttcc ttaatgtttt gatgatttaa gtggtttgtt
     4681 tgccggtttt cagacggcct gagttagatt ttgcacgctc cgccttcaca gccgtcgtcg
     4741 ttttccgaat cgacgccgcc ttccacggta acgccgtcga aatcgtcaag caggttgtcg
     4801 aggttgtcca aatctaaatc ttgttcgttc atatttttct cttgattgct ttgtttttgg
     4861 aatgccgtct gaaggttcgg atggcatgtt ggtacgcttt aatgcgccgc ccattcaatc
     4921 gagttcaaat caatcccgtc tttgaacatt tcccacaacg gcgacagttc gcgcagtttg
     4981 ccgattttgg atttaatcag ttcggcggca aattgcactt cttcttcagt ggtcatgcga
     5041 ccgaaggtga tgcgcaggga cgagtgcgcc aattcgtcat ttctgcccaa tgcgcgcagg
     5101 acgtagctgg gttcgagcga ggcggaggtg caggcggagc cgctggatac ggcgagttct
     5161 ttcactgcca taatcaggct ttcgccttcg acgaagttga agctgacgtt caggttgttc
     5221 ggggcgcggt gttcgaggtc gccgttgata tagacttctt cgatgccttc gatgcctttg
     5281 aggaagatgt cgcgcagttt gcggtagtgc gccatatctt gttcgagttc ttctttggcg
     5341 atgcggaagg cttcgcccat accgacgatt tggtgggtcg gtaatgtgcc gctgcggaag
     5401 ccgcgttcgt ggccgccacc gtgcatttgg gcttcgaggc ggacgcgcgg tttgcggcgg
     5461 acgtacagcg cgccgatgcc tttagggccg tatactttgt ggccggacat agacaacaaa
     5521 tcaactttgg cggcttcaac gtcaacaggt actttgccgc aggcttgggc ggcatcgacg
     5581 tggaaaatga ttttgcgttc gcggcagatt tcgccgatgg cgggaatatc ttgaaccacg
     5641 ccgatttcgt tgtttaccca cattacggaa acgaggatgg tgtcttcgcg gatggcggct
     5701 ttcagtacgt ctaaatcaac caaaccgttt tcttgtacgt ccagataagt tacttcgtaa
     5761 ccttggcgtt cgagttcgcg catggtgtcg agtacggctt tgtgttcggt tttgacggtg
     5821 atgaggtgtt tgcctttggt tttgtagaag tttgccgcgc ctttgatggc gaggttgtcg
     5881 gactcggtcg cgccgctggt gaaaacgatt tctttagagt cggcgttaat cagggcggca
     5941 atgtctgcac gtgctttttc tacagcttct tctgcttccc agccgaagct gtggctgttg
     6001 gaggctgggt tgccgaaggt ttcggtcaga tagggaatca ttttttcggc aacgcgtttg
     6061 tcaacggggg tggtggcggc gtagtcgagg taaacggggg ttttgacggt catggtttgc
     6121 tctttctttt tcgggtgtta tttaatggat gtgtgtaaat tggacgacgc ggctgccgtc
     6181 gccgttgttt ttctgttcga tgatgctttg cagggtaacg ctgccgaggt agtcgttgat
     6241 ggttttgttt aaattctccc aaagatcgtg cgtcaggcag ggcgcgccgt ggtggcagtt
     6301 ggctttgctg ccgcattggg ttgcgtccag ccggtcttcg gcggcggcga tgatttgggc
     6361 gatgttgatg cgtgccgccg gtgcggcgag gatgtagccg ccgccgggcc cgcgcaggct
     6421 ttcaacaagt ccggcgcggc ggagtttgcc gaacaattgc tcgagatagg agagggatat
     6481 gttttggcgt tcgctgatgg cactgagttt gacggcgccg gtttgcgcgt tcatcgccaa
     6541 atccagcata gcggtaacgg cgaaacgccc tttggtggtc agtctcatgg tggtggttgc
     6601 ccatgtcggt ttttttatta gtgggtggaa ttgtccaata tctgagtgtt tcagtcaagt
     6661 atgagggcgg attgtgtgat tggctgttta aatcgataga ttgattgatt tttaatattt
     6721 tgattttaat ttgttatttt tgaattttaa accttatgtc gcttaaagta gggagctgcg
     6781 gcggatgcgg caaatgttga aatgatttgc cttataatca atattgatat acattatcga
     6841 tttcatataa agttattcag gtattcaggg ggcgacaaat gaaacgtgat ttgagcaaaa
     6901 tgacctgcat cgaagacttg cgccgcgttg ccaagcgcaa aatgccgcgt atgttttacg
     6961 attacatcga ttcgggttcg tggacagaaa ctacctaccg tgaaaacact tcggatttca
     7021 aagacatccg cttccgacaa aaggtattgg tcaatatgga aggccgaagc ctggaaacca
     7081 aaatgatcgg gcaggatgtg aaaatgccgg tggcgattgc gccgacgggt ttcacgggta
     7141 tggcacacgc cgacggtgaa attttggcgg cgcgggcggc ggagaagttc ggcattccgt
     7201 ttacgctgtc cacgatgtct atctgctcga ttgaagacgt tgccgagaac acttccgcac
     7261 cattttggtt tcagctttat gtgatgcgcg accgcgagtt tatggaaaac ctgattaagc
     7321 gcgcgaagga tgccaaatgt tcggcattgg tattgaccgc tgatttgcag gttttggggc
     7381 aacgccacaa agacatcaaa aacggcctgt ccgcgccgcc gaaaccgacc atcgccaatt
     7441 taatcaatct ggcgaccaag cccgaatggt gtatgaaaat gctgaacacg gaacgccgca
     7501 cgttccgcaa tatcgtcgga cacgcgaaga acgtcggcga tttgtcttcg ctgtcttcat
     7561 ggacttccga acaattcgac ccgcgcctga gctgggacga tgtggcgcgc attaaagatt
     7621 tgtggggcgg caagctgatt atcaaaggca ttatggaacc cgaagacgcg gaaaaagcag
     7681 cgaaaagcgg cgcggacgca ttgattgttt ccaaccacgg cggccgacag ctcgacgata
     7741 ccgtgtctgc catcaaagcc ttgcccgaca tcgtcagcgc agtgggcagc gacatcgaag
     7801 tttggatgga cagcggcatc cgcagcggtc aggatatttt gaaggcttgg gctttgggcg
     7861 cgaaaggtac aatgataggt cgggcgttcc tgtatggctt gggcgcgtat ggcgaagaag
     7921 gcgtaacccg tgcgctggaa atcctatata aagaaatgga tatatctatg gcgtttacgg
     7981 gacaccgcga tattcaagat gtcgatgcct cgattttgag gggtaaggat tggggtaggg
     8041 aaacggttta gatactgaaa aatacgatgc cgtctgaaca cagggttcag acggcattaa
     8101 aatttggctg tattttaata atgtgttgat taaatatctg acaaaacgcc cttttgtaaa
     8161 ggaagttttg tcaaacgggg ctgcctgcaa tgcactactt cattttttca agcgatgccg
     8221 cacctaaagg gaatgactcc gtaaattgtc catttttctg atgatcagta aaaaacggta
     8281 aaccgatcaa acgataatgc ggtgtatctt tttgcaggat cttatccatc ccatattcca
     8341 cagtgatggc ttctaaaaat tcttctttcc atccatcagt ttccactaaa tgctcacctt
     8401 tgggctcaat gaaaatttgg taatgcaaaa agtcattcac gccattggaa gaagattttt
     8461 gtttatcttt cagcaataaa ataaagtccg gcataaatcc ttcaccatcg gcaaagttat
     8521 tcaatttaaa cacttcttca ttacggatta aatgaatgtc atattgagat ttcaaatcgc
     8581 ccaaacgcgc tgaaataaat tgaattaacg cttcttccaa acccgttccg gcaaaattat
     8641 tcatcacata ccaatcattt tgcgtggcaa tagtcgtttt tacatcatct tttttgaccc
     8701 atttttgttt tggtgtgccg aaaatttccc ataatgtttt aggcgtaaat tcttttgtac
     8761 cgataaacgg catatcactt tcattcagat gtttttcaac catttccaag attttcaggc
     8821 agcctgcaag tttatcgtcc gggcgaacct gtttgtcttg ccctaatcct aaaaattcaa
     8881 tttgccagtc tttcaacaag ttattttgca attcattgcg attttgaatg ttgagcttgc
     8941 tttgcaaacg gttgaaatgg aataaagatt gactattttt ccctttgata tgcagggctt
     9001 tattgaaaat gtgccgctcc atttcactca tttttatggt ttgagtaaaa ttattttgcg
     9061 tgccaagttg cttgactttt tcatcatttt catcggctgt aaattgcgtt tcctgcaaca
     9121 gttgattgcc gtgaacttgg aatgaaagcg tttgcggatt ggcttgcagg ctgtttgcat
     9181 tattggtttt ggcgtttggg ttggggattt ttttattcgc ccaaattaac aattctctaa
     9241 aatccttatt agcggcaaat tcagatttga gtttaaatgt tgccaatacc ttatcatcgt
     9301 ctttttcagg caaataaccg tcttttcgca actcgttttt cagttctgaa atatagcggg
     9361 attgctcatc gtgcgtgtaa taaaacaatt cttccaagat acgcaattcg tgttgcatat
     9421 cgttgtcaaa tttgcgttta ttcggctgtt taccttcaaa cgcaaatgga aaataacgca
     9481 cgccacgacc aatcaactgc ttttccgata cggtagcggc agccgttttg cctgattttt
     9541 tatttgaacc accgccattt tgcccttcat acaaacgcac aatatcaaac aaattcagaa
     9601 cgtcccaacc ttcggttaat ctatctaccg taaaaatggc acggattgga ttatcagccg
     9661 cttccaaatt gtttagcaat ttttcggttt cgctgtcggt tttttcagtt ttgtttttgt
     9721 tggtttcgga gttggtaata atcacattat gtttttgata attttgtttc acccaatttg
     9781 ccaaatgtgc aaactcaaag ccattttcct gcataaattt tagggcttgt tcggttcggg
     9841 ttttgccttg ttcgttggcg ttgtcgctat tattcaggct gcctgaaaac gtatctaaaa
     9901 actcaaaatc atccgcttgt acattttctg cccaatttaa aaatgccgaa taatccgctt
     9961 ttgattcatc aatcgtctta cttctaaaca acatcacagg cttgaaattg gcaatgccgt
    10021 atttcaacgc gatttgatgg cgataccaag caaataataa agcgtgcaac acccgctctt
    10081 tcttgcccag cgtactggat accaaattga tttctttggt ataacctttt tgcaaaaatt
    10141 cttttaagcc aaattttgtg atgattttat ccgcgtattt ttgttgcacg tcagcatttt
    10201 caggtagcgt ggcggtaaat tccaacagca cattttcgct aggattgcca tttttattga
    10261 gtaacaattc caaaaccata tgctcccagc ctttgcgttc aatctcggca ttgctagtgc
    10321 ggtcgttaat ttccttttct aaatctaatt cgccttgttt tttgcctttg gtttgtgcgt
    10381 ttaaatggtg tgcttcatcg cccagcatca caaggttcaa tttgtgcaaa tccgccaatg
    10441 tggtttggtt ttcccgttcg gtgtggatat cgttatacag cttttgaatg ctggtaaatt
    10501 taatttcaat gccgtctgaa tgtgggctga acatttccac tttgcgaatg ggaattaccg
    10561 tatcgccctg caaaatcttc tcggtaaata aaaattttgc gtgcgttgag ccaataaaat
    10621 tattttccgt tttatctacg atattgtttt gattgacgaa aaacagaaaa tgccgataac
    10681 ccttttcaaa ataatacaaa atcaacgccg ccatcatcat cgttttgcct gcacctgttg
    10741 ccatattgaa cagcaaatgg gtagggcggt ttttgatatc gggaaaatcc tttaattttg
    10801 aagtgcggtc aaaaatcaca aagttttcta aagccgattt ttgccattca aaaaacggat
    10861 attttaaatt gcgttctaca aattcaggca gcctgcattt ttcatcatcg ccgtcttcca
    10921 aatacacagc tttgcggttt tcaatcactt caaacaacat tttattattc gccatctttt
    10981 ttctccgttt gatagaacgc acggcttaac gctttatcgt catcattcag acagcctgca
    11041 aattgttcat cgtccatttc ggataatgaa acatacattt gatttaaatc caacatttca
    11101 agcaccattt gtttttgttc gtctaatggc aaagattgaa attcaggctc ttgaatggtt
    11161 tgactaaatt catttatgct gacgttgtat ttcaagaaat agcgttcgca taaaccttca
    11221 aacagcgttt tgatgccgtc tgaatcttcg caagccaaaa tctgttgttt tgcggtttcg
    11281 ttaaatggag caagttcggc ataaacaaat tcgccaccac cttgccaatt cacggctttg
    11341 gaaataccgc cttgctcgcc atcaatcact tttttcaagc gttcaacagc aagcgtttca
    11401 atataatcca tttgttcaat accgatatat tggcggttca ttttgtgggc aacggcggcg
    11461 gttgtgccac taccaagatg gtagtctaag acgatgtcgg attcggatgt ggcaatttga
    11521 ataagatact gcaataagct ctcaggtttt ggagtagtaa aaactttgct gccgaacagt
    11581 tttttcaatt catctgtcgc atgtgtattt aagatatcct gtattaagtt cttataggga
    11641 gcagaacgtt ctatcggctt gttttcgtta tcaaccaaca tatagttttt ataacataca
    11701 ctccatccag attttttaga ctttgatttt ctaaactcca aaaaaccgtt tgttattgcc
    11761 caatcaattt tatttttact ccatttccat atccagccat cattgacaaa ttcagtcctg
    11821 ccattcggat acgtaaaagt gccatctgga cattggattg caaaattcaa actgtcacta
    11881 tactgcaatc cccctctatc taaattgtcg atataatatt tgcctctttc ctgttcaaac
    11941 ttatcactta atttgtatct ctctgtatca taagaaaacg tgtttttatt taatttaact
    12001 gttttaaagt tctttgagta acataagaca aactctgtaa tagtcgctat ctgtttggca
    12061 tcggacgcac ctgtcttttt ttcccaaata aaattgcaga tgaaattttc atttccgaaa
    12121 acttcatcca ttaaaatttt caaatatgcc tgttcgttgt cgtcaattga cacaaaaatc
    12181 gaaccgtctt tcataagcag ctctttggcg atttctagac ggtttttcat aaaagtcagc
    12241 caagtggaat gattaaattt gtcgttgtat ttaaaaccgt cattacccgt gttatatggc
    12301 gggtcaatat aaatcagctt cactttgcct ttaaactgct tggcaagcga atgcagggca
    12361 atcagattat tgcctttgat aatgagattt tcggcgggtg tgccgtctga atgtcgtttg
    12421 atttcgccaa cggcttgttt gccgtctgcg gtatagcgag agaattttga gaatgctttt
    12481 gcgtcaaaaa gccgatcaat ttcatcaaaa gcaagggttt gattaaaaaa gatttcttgt
    12541 ctttttcggg ttaatttagt gtataattgg ctggctggct ggctggctgg ctggctggct
    12601 ggctggctgg ctggctgtta ttgcgtttaa aataaatttc ttcgccttcc tcggtgcttt
    12661 gtccgccatt taacacacaa tctttaaacg gaaaatccaa cacaatatca ctgctgtctt
    12721 tcaaaaagcg gttgctgtcc gtcaaaccaa tgcggttggc gtattttgtg taggaattat
    12781 tgacgctgtg tttgtccaag aaaaaacgga aatcctgcaa tttaaacacc agcacaccat
    12841 tcacttccac aaagaaatgg cgttttaact catcattact caataacaaa ccgataatgg
    12901 tcgggtcggt tttttccacc aaatccaaca ggatgttttt ggctaaaatg gttttttctt
    12961 cgttcgccca tactttttcg tgtggtagta gggcttgggt taattcggtt tgaatgtctg
    13021 tcttcatcgt tataaatcct catcagttat tttaatgtgc cattcttgtg taacggcaaa
    13081 tggctttgca aatagattct aataaaatca attatttgat gtctttgctg tttccggggg
    13141 cgttcgcaaa gttgcgataa gcggggcggg tgtccgagtg tgtcgggatt ttgcggaaat
    13201 atcaacacat tattcaagca cagcctgtat ttttaaccgc cgttcaggcg gcggatgccg
    13261 ccgtgttcat caggcgcaag gctttcagac ggcatatttc tttttgatat tccgccagac
    13321 cgacaaagcg gccgttttcc gtgtaaacgc gtaccggcgt gtcggaaggc aggtcttctt
    13381 cgaaacgcgg acgttgtccg cagtggagca tatggacggc ataatcgttt aaaacggttt
    13441 ggggaaagtg tgaaaccaat acgtcgcagg gtagcagcaa gctgtcgcgt tctgtttcgt
    13501 tcaaatttgc caaggcctca agcgtgtggc tttgggcgat ggtaaagccg gcggtttcag
    13561 tgcggcgcag ggcggtcagg tgggcgaacg tgccgatgtg tttggcgatg tcttcgctga
    13621 gggtgcggat gtaggtgcct ttgctgcaac gtacgtcgat gacggctttg ggcgcgtcaa
    13681 attcggcaat atcgatggcg taaacggtaa tgtagcgcgc tttgcgttcg atgacgatgc
    13741 ctttgcgggc gtattcgtac agcggtttgc cttcgtgctt gagcgcggaa aacattggcg
    13801 gcacttggcg gatgttgcct gtcagtgctt ggcaggccgt ctgaaattcg gctaaggaaa
    13861 tatcggcgcg ggcggtggca atgatttcgc cttcggcatc acccgtgctg ctggcttcgc
    13921 cgagtttcag cgtggcggtg taggctttgt cggcatccag caggtattgg gcgaacttgg
    13981 tcgcttcacc gaagcagacg ggcaaaagtc cggttgccaa agggtcgagc acgccggtat
    14041 gtccggcttt ttcggcatga aacaaacgcc gcgctttttg cagcgcggtg ttgctggaaa
    14101 ggccttcggg tttgtccaag agcaaaacac cgttgacggc acgtttttgg ggtttgcctg
    14161 tattcatggt tcgatgttcg gacggcatgg gcatatccgt cagtcttcaa ccggtttttc
    14221 cgccgctact tggtcgataa gggcggacag gttcaaaccg cgttccaaag attcgtcgta
    14281 tttgaaatgc agttcgggcg ttttgaacag cttgatgcgt ttggccaatt cgctgcggag
    14341 gtgtccgcgc gcgtgttcca gcacttcttc cgtaatttcg cgcgcgtctt ggtttaaaat
    14401 ggtgtagaac acggtggcgt ggctgtaatc gcgggtaact tcgacttcgt tgacggtaat
    14461 gaagccggcg cgcgggtctt tcagtccggt acggacgagt tcggcaagct cgcgcataat
    14521 ttgttctttg acacggtctt ggcgggcata gccgcgttgg ggttttctca tgaatatcct
    14581 cagatttcag atttggtttc agacggcatt tttgccgccg gggcggttgc gaaagggcgt
    14641 attatagcct aatcggcggg attttaaggt aatacattga taagaacgga tatagttatt
    14701 atacttggca acccgaacgg cacgtgccgt tttctgtaac gcatacattg taaagaaagc
    14761 catgtccaac gaaaaccgta cttgttcctt ttgcggaaaa tccaaatcac acgtcaaaca
    14821 tttaattgag ggcgaaaacg cctttatctg tgacgaatgc gtctcaaact gtattgaaat
    14881 attgcatgaa gacggaaatg acggcacgcc ttcggaaagt gccggagggg agccggaaga
    14941 atccggcaag ctgcccacgc ccgccgaaat cgtcgccaac ctcaacgacc acgttatcgg
    15001 tcaggaacaa gccaagaaag ccttggcggt gtcggtgtac aaccattaca aacgcctgcg
    15061 ccatcctaaa gcaggagcta atgtcgaatt gtcgaaatcc aacatcctgc ttatcggccc
    15121 gaccggatcg ggtaaaaccc tgctggcgca atctttggcg cgcaaactgg atgtgccgtt
    15181 cgtgatggcg gatgccacaa ctttgactga agcaggttat gtcggcgaag acgtcgagca
    15241 aatcattacc aagcttttgg gcaaatgtga tttcgatgtc gaaaaagccc agcgcggcat
    15301 tgtctatatc gacgaaatcg ataaaatttc acgcaaaagc gacaacccgt cgattacccg
    15361 cgacgtatcc ggcgaaggtg tgcaacaagc cttgttgaaa ctgattgaag gtacagtggc
    15421 cagcgttccg ccccaaggcg gccgcaagca tccgaatcag gaatttatca acgtcgatac
    15481 caccaacatc ctgtttatct gcggcggcgc gtttgcaggc ttggaaaaag tcatccgcca
    15541 gcgtactgaa aaaggcggta tcggtttcgg tgcgtccgtt cacagcaagg acgaaaatgc
    15601 cgacattacc aagctgttcg gcatcgtcga accggaagac ttgattaaat tcggtctgat
    15661 tccagaatta atcggacgtt tgcctgtgat tgcaacttta gaagaattgg acgaagacgc
    15721 gctgattaat attttgaccg agccgaaaaa tgctttggtc aagcagtatc aggcgttgtt
    15781 cggtatggaa aatgtcgaac tggagtttga agaaggcgca ttgcgttcca tcgcgcgtca
    15841 ggcaatggaa cgcaaaaccg gcgcgcgcgg cctgaggtcc atcgtcgaac gctgcctgct
    15901 cgatacgatg taccgcctgc ctgatttgaa aggcttgaaa aaagtggtgg tcggtaaggc
    15961 agtcatcgaa gagggcaggg aaccggaatt ggtgttcgag tcctgatggc aaacaaaacc
    16021 gcttcggaac gttgaaccac gtttctgaag cggttttttg tttctgatgc cgtctgaagc
    16081 cttcccgcct tcagacggca tttgagtttt acggattgtc tgatgtcgcg gcaaattccg
    16141 tcagcgcgtg ttccaaacgt cgcaaacctt ccgccatatc ctcatcgttc aacagtagcg
    16201 aaggcgcgaa acgcaatacg tccgcacccg caaccaaaat catcacgccg tgtttcaagg
    16261 cggcggcggt gatttcggat gcgcgtccgc gataggcttc gtccaacacg cagccgagta
    16321 gcagccccat cccgcgaact tgtgagaaca agcccgtttt cctgcacaaa tccagcaatg
    16381 ccgtctgaag tttctgcccc tgttcacgga catggtttaa agtttcgggc gtattgatga
    16441 tgtcgaatgc gcggctgccg accgcacacg ccatcgggtt gccgccgaaa gtcgagccgt
    16501 gcgtgcccgg ttggaaggcg gcggcaatct tttctgtcgc cagcatcgcg ccgatcggaa
    16561 agccgcagcc caaggctttt gccgaactca aaatatcggg aacaatgccg taatgttcat
    16621 aggcaaacag cctgcccgta tgccccatcc cggtttgaac ttcgtccaaa atcaacaacg
    16681 cattgtgccg gtcgcacaga cggcgcgcgg tttgcaaata ttccgcagtg gcgggcagga
    16741 tgccgctttc gccctgtatc ggctcgatga tgaccgcgca ggtctgttcg ccgacggcag
    16801 cttccagcgc ggcaatatcg ttgaacggaa cgtgcgtaat gccttgcggc aggggtgcat
    16861 aatccttgct gtatttcggc tgaccgccga cggacacggt aaacagcgtg cgtccgtgaa
    16921 aactgttgat acaggcgacg atttcgcttt ttcctccgcc gaaacggtcg cgggcgtatt
    16981 tcctcgccag cttcaacgcc gcctcattcg cttccgagcc cgagttgcag aaaaaaacct
    17041 tgtcggcaaa actgtttgca accaattttt gcgccaattc ctgcgctgga cgcgtcgtat
    17101 agatattgga aatgtgccac agcttgtgca tctgcgcgtt taaagcatcg acaagggcag
    17161 ggtggcagtg tcccagcgca ttgacggcga taccgcctga aaaatcaata tattcacgcc
    17221 ctttcgtatc ccaaacgcgg ctgcctgaag cgcgttcggg aatcatcggg gcaaaggcga
    17281 aattgggggt cagatagttt tgcataattg ctcctgattg cggttttgct cgggattatg
    17341 caccgttttt caaagcagat aaagggaaat tgccgacaat atcgggcagc ggtaaaaata
    17401 aaccgaaata ttttcaatcg gatagatgaa aaatcaaaaa aatttcgata aaatgcttga
    17461 ggcgcggcag cgttttgatt tagaatctcc ccaatatttt tatcttcaga cggcatttca
    17521 tcatgcaagg caaaaaattt acaaccgctt attgctattg gtaccacaca gacgtgcggt
    17581 acttttttgc gcttgcttga aatccatccc atacgcaaaa caggccgctc gaaaacgggg
    17641 cggctttttt gttaccttca cacaggtcgc ccgattcggc aacacacgac agaatcagga
    17701 aaatgaccat gaatgcaatg ccccaaaccg ccgcacaaaa cgaaaccctg cacacttgta
    17761 gcattattgt cgatgatgca caggattttt cccccatgct tctcgatgca gggcgggacg
    17821 acacacttat cagcgaatcg atgattccgc aaatccgcac cgttgccgcc ctgatagccg
    17881 ccgaacggca cgacttcagc cgcagcagcc ccgccgagtt taccgatgcc gccgattttt
    17941 ttgccgcacg gattctcgta ttgggcgtgc gacgcttcca tctggacgta tcgctgcttc
    18001 agattttgaa aaccgccaac agccgcgccc gccgctttgc cgaaaaacac cgcctgtttt
    18061 tcacacccgc acaagccgaa ttgagcctga acaaacacaa aaaccgccgc ctgctgaccg
    18121 tagaaaccga acacgaagtc gaaaacaaag gcaacccagt cgccaacagc ctcgcatttg
    18181 tccgcaaatt gcacaccctg cccctgtaaa catcacgatt tgccggcaga atgcttgcca
    18241 aaattcccga cggcgataca ataaaaccga ttttccaccc aaacaggaca cacatgaaaa
    18301 aaatcatcgc ctccgcgctt atcgcaacat tcgcactcgc cgcctgccaa gacgacacgc
    18361 aggcgcggct cgaacagcag cagaaacaga ttgaagccct gcaacagcag ctcgcacagc
    18421 aggcagacga tacggtttac caactgactc ccgaagcagt caaagacacc attcctgccg
    18481 aagcacaggc aaacggcaac aacgggcaac ccgttaccgg taaagacggg cagcagtata
    18541 tttacgacca atcgacagga agctggctgc tgcaaagcct ggtcggcgcg gcggcaggcg
    18601 cgtttatcgg caacgcgctg gcaaacaaat tcacacgggc aggcaaccaa gacagtcccg
    18661 tcgcccggcg cgcgcgtgca gcctaccatc agtccgcacg ccccaatgcg cgcaccagca
    18721 gggatttgaa cacgcgcagc ctccgtgcaa aacaacaggc ggcgcaggcg cagcgttacc
    18781 gcccgacaac gcgcccgccc gccaattacc gccgccccgc tatgcgcggt ttcggcagga
    18841 ggcggtaaac ccggcgcgcc aatgccgtct gaagagcttt cagacggcat ttttgcattt
    18901 gttagggaca ttgttatgtt gccgtttgat tttcagacgg cattttgttt ccaagcgttt
    18961 gatgtcggga tggcaattct gatttacgtg cgttggcagg gtggcattgt catgccgccg
    19021 ttgggttttc agacggcatc atatcgaaca gtcaagccgt agggcgagca ttcttgccca
    19081 ccgttgcaag ggcgggattg ggtgggcagg aatgcccacc ctgcatctga aacccttccg
    19141 tgtcattccc gtgcaggaag gaatctagat atttgaattt acggaaattt tcaatcgttg
    19201 ccaaagcgga aaagggtttt tattacagcc taatcctttg ggtatcaaag ccgggcggtg
    19261 ctgaaacatt gcaaaaatgc cgtctgaaac tcgaaatcgg tttcagacgg cattggttta
    19321 tgcggcaggt tggggcttag cggtctttgt aacggcgttc gcctctgcct gcaaaagaat
    19381 cgccggcttt gcgtttgcct ttgaagcctt cgccggtttt tttgaaaccg tctttcttaa
    19441 agccttcttt cttgaaacct tcgccgcgcg ttttgccgcc gaagccttct ttgcccggtt
    19501 tatgatcgcc gcgccggccg ccggatttcc tatcgcccca gccgcctttg ccttttggct
    19561 taccgcctgc ggatttgcgt ttgcgggtcg gttccatgcc ttcgatggtc agttcgggca
    19621 gtttgcggtt aatgtatttt tcgattttgt ggactttgac gtattcgttc acttcggcaa
    19681 acgtaatcgc aatacccgtg cggcctgcgc ggccggtgcg cccgatgcgg tggacgtagt
    19741 cttccgcctg tttcggcagg tcgtagttga tgacgtgggt aatggtcggt acgtcgatac
    19801 cgcgtgcggc aacgtcggtg gcaaccaaaa ttttgcagcg gcctttgcgt aaatccatca
    19861 gcgtgcggtt gcgccagccc tgcggcatgt cgccgtgcag gcagttggcg gcgaaacctt
    19921 tttcgtacaa ttcatccgcg atgacttcgg tcatcgcttt ggtggacgtg aaaatcacgc
    19981 attgatcgat attggcatcg cgcaggatgt ggtcgagcag gcggtttttg tgacgcatat
    20041 cgtcgcagta cagcagttgt tcttcgattt tgccttggtc gtccacgcgt tcgacttcga
    20101 tgatttcagg gtctttggtc agtttgcgtg ccagtttgcc gaccgcgccg tcccaagtgg
    20161 cggagaacaa taaagtctga cggtcggtcg gggtggcttc gacgatggtt tcgatgtcgt
    20221 cgataaagcc catatccaac atacggtcgg cttcgtccaa aatcagcact tccaaacgtt
    20281 caaaatcaac tttgccgctt tgcatcaggt ccatcaggcg gcccggcgtg gcgacaatca
    20341 gatcgaccgg tttgctcagg gcgcgggttt ggtagccgaa cgatgcgccg ccgacgatgc
    20401 tgacggtacg gaaccagcgc atatttttgg catacgccag cgcgtttttt tccacttgtg
    20461 ccgccaattc gcgggtcggg gtcaacacca aagcacgcgg gcctttgccc ggtttttcgc
    20521 tgcgtttggt cagtcgctgc aaagtcggta acagaaaggc ggcggttttg ccggagccgg
    20581 tttgcgccga agccatgatg tcgcggcctt ccaaagcaaa cggaatcgcc tgcgcctgaa
    20641 tcggcgtcgg gctttcgtaa ccctcgctgc tgacggcgga caaaatgttt ttatcaaggt
    20701 tcaaatcggc aaatttaata gacatggcta tccttggaag acaacaacgc ccgcgtccga
    20761 aaggttcaga cggcctgaag cagggaaggg taacgatacg gggaatgtga agttacaggg
    20821 ttgtcgcaag cggcttgctt gtggtttaca tcgacgacaa cctgcacaga aaggctttgc
    20881 aaaatcaaag caacaaaaga aacgcgcccg taagggcggt ttaggttgga aggcgatggc
    20941 ttcgtatgac aagataagcg gcggatggta tagggtttgc ccgaaacggt caagcaatcg
    21001 ggcgttaatt acagtaaaat tgccgttttc cactttaatt ccgcctgaaa ccaatgaccg
    21061 acatcacacc gtttgccaac cgcttgggca aaaacatcaa acaccttatg aaatgggcga
    21121 aacgcaacgg cattgaagcc tggcgcattt acgaccgcga catcccccaa ttcccctttg
    21181 ccgccgatgt ttacggcgat cgaatccacc ttcaggaata cgataccggc tggctgatgc
    21241 ggcccgaaga atacgaagcg tggcttgccg aagtcttgga agccgtcgct ttcgttaccg
    21301 gttttgaacc cgaacaaatc cgcctcaaac gccgcgaacg ccaaaaaggt ttgcagcaat
    21361 acgaaaaaac cggcaaggcg ggcgacgatt tcgtcatcac cgaaaacggc cgcaagtttt
    21421 gggtcaacct tgataagtat ttggatacgg ggcttttttt ggatcatcga aacacgcgca
    21481 aaaaagtcgg cgaaacggcg gcgggcaaac gttttttaaa cctgttttcc tacaccggca
    21541 gcttcactgt ctatgccgcc accggcggcg cggcatccag cgaaactgtc gatttgtcta
    21601 acacttatct cgattgggcg agacgcaatt ttgaattgaa cggcatcgat acggaacgac
    21661 acaaaatcgt ccgcgccgac gtgttccaat atcttcagac ggcatatggg gaaggcaggc
    21721 ggttcgacct cattgtgatg gacccgccca gtttttccaa cagcaagaaa atgtccgaca
    21781 tcctcgacat ccagcgcgac cacaaaaagc tgattgacgg cgcggtgaag ctgctcgctt
    21841 cagacggcat tttgtacttt tccaacaacc tgcgcagctt cgtcttagac gacttggtat
    21901 cggaacaata cgccgtcaaa gacatttcca aacaatccgt tcccgaagat ttccgcaaca
    21961 aaaaaatcca taggtgctgg gaaatccgcc acaaatctta agggtgcgaa aaagccgccg
    22021 gaatcttccg gcggcttttt cgattgcgct ttatcaggcg atagaggctt cgacaaaggc
    22081 ggtcagctga ccttttgcca atgcgccgac tttggtggcg acgacttcgc cgtttttgaa
    22141 caccatcagg gtcggaatgc cgcgcacgcc gaaacgggac ggggtggctt cgttgtcgtc
    22201 gatgttgatt ttgaccactt tcagacggcc ttcaaattcg gcggcaatgt cgtccaaaat
    22261 cggggcaatc attttgcagg ggccgcacca cggagcccaa aagtccagca ggacggggat
    22321 atctgcattt aaaacgtctt tttcaaaagc ggcatcgctg gtgtgtacaa tcaattcgct
    22381 gctcattatt tttccttttc ggttgggatt ggcacgatag cgtgcaggat agggcttggg
    22441 cataaaaatt tcaagtgggc gggcgggata atagtttttc tgtaccgccc caatcgcctt
    22501 tgcaaattct aaaaaacggt tcggacagta ttttatttct gaaaattact tttattatca
    22561 aaatgtaagg aatacgtttg aggctgtaca gaagcgcgcg ggcggtgtat gctccgtttg
    22621 aattgattct taaagtatga atgttcaaaa ccaaacccga aaccctgtaa aaggaacact
    22681 gcgatgactg atttttccgt ttgggagacc gccccctttg gtgcaaccgt cgatcatatc
    22741 ctgcaacgct accacaatgt ccaccgtgca caatttgaag aattggtgcc gctggcgcaa
    22801 aaagtggccc aagttcatgc cgacaccttt ccggcggaaa ttgccgagct gcttgcctat
    22861 atgcagaacg aactgctgat gcatatgatg aaagaggaaa ggatgctgtt tccgatgatt
    22921 aatcagggtg tcggccgggg tgcgacgatg cccatcagcg tgatgatgca cgaacatgaa
    22981 gaacacgacc gcgccatcgc acggctcaaa gagctgaccg ataatttcca agcgcccgaa
    23041 ggagcctgcg gaagctggac acggctttac gttttgacca aagaaatggt ggacgacttg
    23101 aacgaccaca ttcatttgga aaacgatatt ctgtttgccc gcgtactcga ttcttaagga
    23161 acgggagccg gatatttcca tgccgtctga aatacggttt ttccgcttca gacggcattt
    23221 ccacgtttca gcccaacaat tcgggcggaa tgcggcacac gggaatcggg ttgattttgt
    23281 gctgcatcgc gcggtgcagc cgcgtataga tttccagaac ttcgcgctgc cgcccttcaa
    23341 aatcttcggg tttgcgcgtg ccgtacacgc ccattgccca ctccagttcg ggatagcttg
    23401 cgcccatctg ttcttcgtcg gtgcgttccg tatcccacag gccgtcggtc ggcggggctt
    23461 tttgaatcgc ctcgtccacg cccaatgctt cggcaagccg gtaaacctgc gttttggtca
    23521 ggtcggcaat cgggctgatg tccacgccgc cgtcgccgta tttagtaaaa aagcccacgc
    23581 cgaaatcttc aatcttatta cctgtccccg taaccagcag tccgtgtatc tgcccgtagt
    23641 agtacagggt cagcatacgc aggcggcttc tggcgttggc gagggaaagc ggctgattgg
    23701 caaatgccgt ctgatgagtg ccgacggttt gttcaaaggt ctggaaggtg tcggtcagat
    23761 cgaccgtttg cgcgcttaca ttggcatatt gccgttgcag attgcggatg tgcagccttg
    23821 cccgctcaag ctggccgggg tgttggcgta tcggcatatc cagaagcagc gtggggcggc
    23881 cggtgcgggc ggcgagtgcg gagacgacgg cggaatcgat gccgccggaa acgcccacga
    23941 caaacccttt tgcatttgcc cgggcggcgt attcgtccaa ccatcgggcg atatgtgtga
    24001 taactgcctg cgtatccatt tttcctcctg tcgaaaatat ccgcatcata gcctgccggc
    24061 ggtgcaattt gaatagattg caggcaggtt gatgaatatt tttcccattc cccgcttaaa
    24121 aaagtcatac gggaaaaggc gggcggcaag atggcgcgtg ttataatatt gttgacaatt
    24181 taggcggccc ggtgccgcct taggcttcaa aacatattca tattttttac tatttgattg
    24241 attcgatgtc tgattttttt cattctgacg tgttgtccgt ttccgagttg aacgcatttg
    24301 ccaaaagtct tttggaaaac caccttgccg gtttgtggat tgccggcgaa gtatccaacc
    24361 tgacccgtgc cgccagcggg cattattatt tctcgctcaa agacagccgc gcacaggtgc
    24421 gttgcgcgat gttcaagggt gcggcggtgc gtttggcgaa gcctttgaaa gaaggcgacc
    24481 atatcgaggt atcaggaaaa atcagtattt atgaagcgcg gggcgaattt cagattaccg
    24541 taaacgaagt acggctcaaa ggtttggggc agctttacga agcctatgag cggttgaagg
    24601 cgcagttgca ggcggaaggc gcgtttgcgg cggaacgcaa gaaacctttg cccgtccgtc
    24661 cgcaatgtat cggcatcgta accagtctgg cggcggcggc tttgcgcgat gtcgttacta
    24721 ccttgaaacg ccgcgcaccc gaaatccccg ttatcgttta tccgacaccc gttcaaggcg
    24781 caggcagcga attgcaaatt gcccaagcga ttaaaaccgc ctcgcaacgc gccgaatgcg
    24841 atgtgttgat tgtctgtcgc ggcggcggca gcattgaaga cttgtgggcg tttaacgaag
    24901 aaccggtcgt gcgcgccatc gaatcctgca cggttccggt cgtcagcggc gtaggccacg
    24961 aaaccgattt cacgcttgcc gatttcgtcg ccgatatgcg cgcgcccacg ccgaccggtg
    25021 cggcggaact ggtcagcccc aaccgccaag aatcgctgca ccgcctcgcc caagcccaat
    25081 gccgtctgaa aaccgttttg gaacaacgct atttcgatgc cagccaaaaa ctcgactggc
    25141 tggcgcggca aatccgtcat ccgcgccaaa aactcgacga acagcgcgct tcaatcggca
    25201 agctggcgca aacgctgtct tactcgatga cgcaaaacgt ccgtacccac accgcccgtt
    25261 tcgaacgcca aacccaagcc ctgaaacatt gccgtcctga tgtttccgtt tgcaaaaaaa
    25321 acatcgaccg ctttcagacg gccctgtcgc acgccttcca ccaactgctt acccaccgcc
    25381 gccaaagcct gactgcccaa gccgcattgc tcgaagccgt ttcgccgcag cacattctgg
    25441 agcgcggctt ttccgtcgtc aaaaacacac gcggacaagt catccgcaac gccgatgttt
    25501 tgaagcaggg gcagaagctg cacattatct tcgccgacgg cgaaaccgac gtgcgcgtaa
    25561 gcaaagaaca agggcagcag gatttgttcg attgcattta aacccaatcg gaaaaaccgc
    25621 tcccccgccg ccgtcattcc cgcgaaagcg ggaatccagt cccttgacct taagataatc
    25681 tttaattcgt cattcctgaa aaagcgggaa tccggaagcg aaaagccgca ggaatttgtc
    25741 ggaaaaaaca gaaacctttc cgtacacccg aaatgtttca gacggcgcat cttggggcgg
    25801 ataaaaaccc gacccgatat ttttttataa ttttcaataa gtttccattg ggcaaatgaa
    25861 attttatttt tcaactgaca gaaagaggat gttatgaagt ttttagaccg tgaggcaagc
    25921 attgccaagc cgggtttcaa ccgttggctc gtaccgcccg cagcattggc ggtacacctt
    25981 gccatcgggc agatttacgc ctattccgta ttcaacgcgc cgctgaccaa acttatcggc
    26041 ataaccgaat cggcggccgg agattggaag ctgacgaccg taggttggat tttcagtatc
    26101 gcactcgcga tgctgggcgc gtcggccgcc ctgttcggta cgtggatgga acgggtaggg
    26161 ccgcgcaaag ccatatttgc cgccgcctgc tgcttcagcc tgggcttctt cgtatccgca
    26221 ttcggcgtgc gtacgcacaa cctcttcctg ctctatttgg gcaacggcgt catcggcggc
    26281 gtaggcttgg gtttgggcta catcgggccg gtttccacac tgatgaaatg gtttcccgac
    26341 aagccgggta tggcgaccgg tttggcgatt atgggtttcg gtggcggcgc aatgctggcc
    26401 tcgccgcttt ccgtatcact gatgaacacc ttttcaaacg ctgcttcggt cggggttgcc
    26461 gaaaccttcg ccgtattggg tctgctttac ctcgcactga tgatgttcgg cgcgtttacc
    26521 atccgcgtac ctgccgacgg ctggaaacct gaaggctata ccgcgccgaa aacgcaaaac
    26581 aagctggtca gcagcaatca tgtcaacgtg tcccaagcca tgaaaacgcc gcagttttgg
    26641 ctgttgttct gggtattgtg cctgaacgta actgccggca tcggcgtatt gggtcaggca
    26701 tccgtgatga ttcaggaact cttttccgaa acctccatag gcaggcaggc agcagtcggc
    26761 gcaggtgcgg cggcaggctt cgtcagcctc ctgagcctgt ttaacatggg cggacgcttt
    26821 ttgtggtcga gcgtttccga caaaatcgga cgcaaaaaca cctacaccat cttcttcgta
    26881 ctcggttcgc tgctgtattt cgccgttccc tccatcggcg agggcggcag caaagccctg
    26941 ttcatcatcg gcttttgcgt gattatttcc atgtacggcg gcggatttgc cgccattccc
    27001 gcctacctga aagacctgtt cggcacctat caggtcggcg cgattcacgg acgcatcctg
    27061 ctggcctggt caaccgccgc cgtcatcggc ccggtactgg tcaattacat acgccaaagc
    27121 caaatcgaca gcggcatacc ggcggcacag gcatacagcg taaccatgta catcatggcg
    27181 tgcctgctga ttatcggttt gttgtgcaac ctcgccgtca aatccgtaca cgaaaaacac
    27241 cacgaaaaag acatcaaaac cgccgcacac agcggcaacc ccgatgacga aaccgccata
    27301 tccgacgctt accttgtggg cgaaaaagtt tccggcggcg gcatatcggt ctggtggcgt
    27361 tgggcattgg ccgtcatacc gctcgcctac ggcgtggtga tggtctttgt caaagcactc
    27421 gaccttttct cctgaaaacg cccgaataaa atgccgtctg aaacagcaga tgtttcagac
    27481 ggcatttttg tgttttggcg ggtttaggct tttttgcggc ggcgttcgcc cggcagcagc
    27541 atgtccgccc atttgatgat gttggcgact tcggcggggt tgagttcgta gaactgcccg
    27601 cgtttgaggc ggttgggcag tccgatggga ccgaagccga tgcgcacgag gcggctgacg
    27661 gtgagtcctt ggctttcaaa aatgcggcgc acttcgcggt tgcggccttc tttaatcacg
    27721 acgttgtacc atttgttcgc gccttcgccg ccttgttcgc ggatgcgttc gacttttgcc
    27781 aagccgtctt cgagcatcac gccttcttcg gtgaggacgc gcatttgttc gccggtcagc
    27841 ccgcccaaga cgcgcacggc gtattcgcgt tcgacttcga agctggggtg ggcgaaacgt
    27901 tggacgagtt cgccggaggt ggtaagaatc agaagtccgc tggtgttgat gtccaagcgt
    27961 ccgatggcga cccagcggct gctggcggcc tgcggcaggc ggtcgaatat gctgacgcgg
    28021 ccttgcgggt cgtcacggga aacgatttcg ccttcttgtt tgtaatacag gatgatgcgc
    28081 ggcaggcggt ccgcccattt gagcttgatg atgctgcctt tgacggtaac gtggtcgtcg
    28141 ggggtaactt tgtcgcccag ttgcgcggtt ttgccgttga ccgttatcca gccgttggta
    28201 atccattctt ccatttcgcg gcgcgagccg acgccggacg cggcaagcac tttttgcagg
    28261 cgttcgggtt ccatgcgcga caggtcgctg cggcgttctt tcaaatcgcg cgcgtgttcc
    28321 ataatttttt ggttgggatt gcggacgacg agttttttgg ctttggcggc gcgctgtttg
    28381 gggacgtttt gaggtttgat gccgtctgaa gctttttgcc cgtaaggttg ggaagcggtt
    28441 ttgcccgttt catctttggg acgggctttg cttttgaacg gtttggcggt tttcttggca
    28501 gacggggctg cgccgtcgcg ccattggcgt ttgctggtgg gctgtttgga catcattttt
    28561 cctaactcgc ctgataaggc ggttcttctg cggcgtgtgc ggcaggacgg gttgataaaa
    28621 tgccgtcctc ggtcggacgg ttcgatattg tacctgatgc ggcggttttg cggatgaaat
    28681 cgtcgctgcg gcttggggtc ggggcaaagt ttgtgcgacg gttgaaatcg gtttgcgtgc
    28741 gggagtagaa tctttcaaat gataagagga gcagtaaatg gatttgcaca atattcggga
    28801 agattacagc aaacgggaat tgtcggaagc cgattgcgcc gataatccga tcgagcagtt
    28861 cgagcggtgg ttggacgagg cggtacgcgc acaggtcaac gagccgacgg cggtcaatgt
    28921 ggcggcggtt gacggacgcg gcaggcccaa cagccgtatg gtgctgctga aggaagttaa
    28981 ttctgaaggt tttgttttct ttacgaatta tcacagccgc aaggggcgtt cgctggatgc
    29041 tcatccattt gcggcgatga cgtttttttg gccggagctg gagcgtcagg tgcgcgtgga
    29101 agggcgtgtt gaaaggctgg cggagaagtt gtcggacgaa tattttgaga gtcgcccgta
    29161 tcagagccgt ttgggtgcgt gggcaagtgc gcagagcgag gttattccga acaaggcggt
    29221 attggtggca aaggcggcgg cggttggact caaacatcct ctgcatgtgc cgcgtccgcc
    29281 gcattggggc ggctatattg tgattcccga tttgcttgag ttctggcagg gcagaccgag
    29341 caggctgcac gaccgcatcc aataccgttt gctggatggt ggctggatac gcgagcggct
    29401 gtcgccttga acaggaaaaa acatatgccg tctgaaaacc ggaatcgggt ttcagacggc
    29461 attttttcac ggggaaaaca cggacgggaa gttttttgtg ttctgaacgg aaagctcgaa
    29521 tcctctttat accggggaat tatgatgcgg acggcgtgaa tgcgtcggag aaaaacaagt
    29581 tttccggcag cttatgctgt tgcacaaaca gattctttgt ttgttcggtc atggccggag
    29641 aaccgcaggc aaatacttcg tattccgaca ggtcggggtg gtcttgtgcc gcgatgtctt
    29701 gtacgtgacc atttcttccc tgccagccct ctccggggcg ggacaatacg ggggtgaagc
    29761 aggcgttttt cagacggcat gccaaccctt gtgcttcttc gagggcatac aaatcatcct
    29821 gatgacgcgc gccccagtag aaatggacgg cgcggttgct gccttggcgg ataaggtcga
    29881 gcaggatgct gcggatgggg gcgtagcctg tgccggttgc cagcaggatg acgggtttgc
    29941 cgctgtcttc ctgcaaggta aacgaaccga gcgggccttt aacgcggacg atgccttttt
    30001 ctttgacttt gggttcgctg ccgaaaatca tttccgagca gacaccgttt tcgtgcctgc
    30061 ggatgtgcag ttccaaaatg ccttcttggt cgggtaaatt ggcgatggag tagctgcggc
    30121 tgacgttgcc cggcagcagt aaatcaatgt attgcccggc gtagaaggca aacggcgggg
    30181 ctttgggcag ggcaagtttc aggagggcga catcgtgttt gaaaataata ctttcgatgc
    30241 gtgcgggcag ggtgcggacg ggtagggcat cggctttgta gccggggatg ttgatgttga
    30301 tatcgctttg cgcagtggtg cagcacatca aaatcttgcc ttgcgctttt tctgcttcgg
    30361 ataaagcctg ttccgagtgt ccgcccattt gaatatcgcc gctgaccagt tcggctttgc
    30421 attgtccgca gacaccgctt ttgcaggaat ggggcaggtt gaggttttga cgggcggcag
    30481 cggtcaaaac ggtttcgccg tcgttggcgg caaaggtggt ttggtcgggc agggtaacgg
    30541 tgtggttcat gtcttggtat ggtttgagca gatta
//
LOCUS       DAXHRP010000006        30107 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.006, whole genome shotgun sequence.
ACCESSION   DAXHRP010000006 DAXHRP010000000
VERSION     DAXHRP010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30107
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.006"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(65..904)
                     /locus_tag="ACFM72_000183"
     CDS             complement(65..904)
                     /locus_tag="ACFM72_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HFC6256826.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1189..1264
                     /locus_tag="ACFM72_000184"
     tRNA            1189..1264
                     /locus_tag="ACFM72_000184"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1222..1224,aa:Arg,seq:ccg)
     gene            complement(1329..2522)
                     /locus_tag="ACFM72_000185"
     CDS             complement(1329..2522)
                     /locus_tag="ACFM72_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HFC6256827.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPAAVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="ACFM72_000186"
     CDS             complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="ACFM72_000186"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HFC6256828.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDDEWMQAAQALQQQLDTSVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGGFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANGIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            3774..4874
                     /gene="aroC"
                     /locus_tag="ACFM72_000187"
     CDS             3774..4874
                     /gene="aroC"
                     /locus_tag="ACFM72_000187"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HFC6256829.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQAD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGCEHISQNPFFAANQSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDINGDPVELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            4966..5391
                     /locus_tag="ACFM72_000188"
     CDS             4966..5391
                     /locus_tag="ACFM72_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HFC6256830.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAASETPSVEAEAAGSSAAE"
     gene            complement(5465..7450)
                     /gene="parE"
                     /locus_tag="ACFM72_000189"
     CDS             complement(5465..7450)
                     /gene="parE"
                     /locus_tag="ACFM72_000189"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HFC6256831.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7517..8041)
                     /locus_tag="ACFM72_000190"
     CDS             complement(7517..8041)
                     /locus_tag="ACFM72_000190"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HFC6256832.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLSQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQLSGNR"
     gene            8206..9501
                     /gene="serS"
                     /locus_tag="ACFM72_000191"
     CDS             8206..9501
                     /gene="serS"
                     /locus_tag="ACFM72_000191"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HFC6256833.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWL
                     LSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRLKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9579..10577)
                     /locus_tag="ACFM72_000192"
     CDS             complement(9579..10577)
                     /locus_tag="ACFM72_000192"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HFC6256834.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEAEKIGGKYVDLDELYARSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10702..11778)
                     /gene="prfA"
                     /locus_tag="ACFM72_000193"
     CDS             complement(10702..11778)
                     /gene="prfA"
                     /locus_tag="ACFM72_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HFC6256835.1"
                     /translation="MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLEEITNALIAEHQAELLAAMGD"
     gene            complement(11883..12653)
                     /locus_tag="ACFM72_000194"
     CDS             complement(11883..12653)
                     /locus_tag="ACFM72_000194"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC6256836.1"
                     /translation="MNFTDTHCHLADPALRENLPHILTAARKVGVKRFIVPATRPQDW
                     QDVADLAEMPSEHGQIRIALGIHPWFSDGIAERDFVRLETMLAHYPQAWVGEIGLDFY
                     DKTQTSQQRERQIQVFVRQLEIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANIPGIAKIAAEIRGTCVEEIAKVTERNADALLGR"
     gene            complement(12661..13653)
                     /locus_tag="ACFM72_000195"
     CDS             complement(12661..13653)
                     /locus_tag="ACFM72_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HFC6256837.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVSQALSPFSDGLDFE
                     WHVCNPLIDSSSVTLQHWRDWLDIIADKLPSCDGILILHGTDSMAYTANLLALALQGL
                     GKPIVLTGSQWPYAAENSDAPRNLSTAVAAFSLKLKQTVIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGTLAEWDETRGWHNLRLPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTPADEGFIRAVRDFARQGKLLLNISQVRQGK
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGKEDVYKELVRLKLV"
     gene            complement(13935..14618)
                     /locus_tag="ACFM72_000196"
     CDS             complement(13935..14618)
                     /locus_tag="ACFM72_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC6256838.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPIWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFVILGIGATVVAWIWWKKRQRIQFYRSKLKEKRAQRKAAKA
                     AKKAAQSKQ"
     gene            complement(14807..16141)
                     /gene="glmM"
                     /locus_tag="ACFM72_000197"
     CDS             complement(14807..16141)
                     /gene="glmM"
                     /locus_tag="ACFM72_000197"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HFC6256839.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYFDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLNLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIGKGQNWQEASKG
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16271..17122)
                     /gene="folP"
                     /locus_tag="ACFM72_000198"
     CDS             complement(16271..17122)
                     /gene="folP"
                     /locus_tag="ACFM72_000198"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HFC6256840.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNARTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLVEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQADTGICLMHMQGLPENMQINPKYQ
                     DVVGEVARYLKTRSEACVAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMIGELTGETDAAARVHGSVAAALASVARGAQIVRVHDVKATADALKAW
                     EALGINL"
     gene            complement(17262..18155)
                     /locus_tag="ACFM72_000199"
     CDS             complement(17262..18155)
                     /locus_tag="ACFM72_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HFC6256841.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHDAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGNLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLNHTKGHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18246..20360
                     /locus_tag="ACFM72_000200"
     CDS             18246..20360
                     /locus_tag="ACFM72_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HFC6256842.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSNGIGPPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALR
                     NNSIKIETVNGAFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20424..21902)
                     /gene="ubiD"
                     /locus_tag="ACFM72_000201"
     CDS             complement(20424..21902)
                     /gene="ubiD"
                     /locus_tag="ACFM72_000201"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HFC6256843.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     PALLFEHPVKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VSVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVIGMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(21922..22437)
                     /locus_tag="ACFM72_000202"
     CDS             complement(21922..22437)
                     /locus_tag="ACFM72_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HFC6256844.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECGGDF
                     CIIRYPDQTDRFIRAVLPMPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYETDTFGLHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22444..22878)
                     /locus_tag="ACFM72_000203"
     CDS             complement(22444..22878)
                     /locus_tag="ACFM72_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256845.1"
                     /translation="MCGLWLLRALTAKLPQQRYAALFITLFFAAVLVFGRHDSMYWYP
                     VLVNLMMLAVFGGSLFAGQTVIERLARLQQPDLPEKAVRYTRRVTQVWCVFFIANGTL
                     AALLARLGRYDWWAVYTGVIAYVLMGMPFAGEWLYRKLVLKV"
     gene            complement(23159..23404)
                     /locus_tag="ACFM72_000204"
     CDS             complement(23159..23404)
                     /locus_tag="ACFM72_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFC6256846.1"
                     /translation="MTEQEIYRLLRDTLTELFEIEPERITPDTNLYEDLEIDSIDAID
                     LIDRIKRETGRKLQAEDFRNIRTVNDVVQAVLKIQAG"
     gene            complement(23416..23676)
                     /locus_tag="ACFM72_000205"
     CDS             complement(23416..23676)
                     /locus_tag="ACFM72_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HFC6256847.1"
                     /translation="MNDLENQIKQLIIDSLALEDITAADIGSEDALFGDGGLGLDSVD
                     ALELGLAVQKHFGFRLDGEQENLREHFANVKTLAAFVKSRQA"
     gene            complement(23673..24431)
                     /locus_tag="ACFM72_000206"
     CDS             complement(23673..24431)
                     /locus_tag="ACFM72_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC6256848.1"
                     /translation="MDKLDYCRRFFATWLGFVIFGVGGIMMKLVLLPYTLNGTSGSVA
                     RQLAARRIIGTSWRLFVAYLKWSGVLEVSFKGVEKLNRPGQLILANHPSLLDVVLLVG
                     HVPEMNCIVKKDLQHNPAMSSQIKGAGYIPNEESEAMLETVKAVFDSGQSLLVFPEGT
                     RTGWDGRVKMHRGAVSLGLRYAEVITPVCIKMNPPNFKKGQPWYRIPPKRIRYEITVG
                     DDILPQDWLAEKPLPIAARRLNEYLQDYFTRKTI"
     gene            complement(24424..25179)
                     /locus_tag="ACFM72_000207"
     CDS             complement(24424..25179)
                     /locus_tag="ACFM72_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HFC6256849.1"
                     /translation="MPSIICRFHFDIAAWRVSGSKMRDMAQWAKWAECPDFADGLPDV
                     RPELPFLPAMQRRRLSKAARLVCDAAWDIASAHPGSPVVYASHDGEMARSFDLWLELL
                     KSHTVSPTSFGLSVHNATAGQWSILRQDMSEQTALAVCADGVETALAEAASLLEEGCG
                     SVLVLAADDPLPEGYAVSATRAPFAYALAMVLTKGTRYSLTLSASDDMPSEAGMLPEA
                     YWSGLEWVRFLLNGSRECRRVYRNREWLWQRNG"
     gene            25334..25867
                     /locus_tag="ACFM72_000208"
     CDS             25334..25867
                     /locus_tag="ACFM72_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog family protein"
                     /protein_id="HFC6256850.1"
                     /translation="MPVFASLPPQYMDTLPECPITNTASLLPHSGRMVLIDRITRYGD
                     DFVEAGAQVSPNHILLLDDKLPYTAFIELMAQAVGAYAGIQARKNARSVRLGFLLGTR
                     KLEIFAQSVPIGTHLLATAHMSIQDAGGMGVFDCELRWTDAPETSSETLPSDGILVRA
                     SLNVYSPEHPAGTTDAV"
     gene            25895..26623
                     /gene="fabG"
                     /locus_tag="ACFM72_000209"
     CDS             25895..26623
                     /gene="fabG"
                     /locus_tag="ACFM72_000209"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFC6256851.1"
                     /translation="MTETVLITGSNRGIGKAVAFGLAEDGFDIAVHCRSRRDEAEAVA
                     EEIRALGRNARVLQFDVSDREACREILTADIEANGAYYGVVLNAGLTRDNTFPAFSDD
                     DWDVVLRTNLDGFYNVLHPLVMPMIRRRKAGRIVCMASVSGLTGNRGQVNYSASKAGI
                     IGAAKALAVELAKRKITVNCVAPGLIDTDIIDENVPVEEILKAVPAALMGLPEEVAHA
                     VRFLMDEKAAYITRQVIAVNGGLC"
     gene            26617..27867
                     /locus_tag="ACFM72_000210"
     CDS             26617..27867
                     /locus_tag="ACFM72_000210"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HFC6256852.1"
                     /translation="MLNTRRVAVTGIGGITAFGRDWQSIQAAFKAEKNAVKYMDWHER
                     FPELEAQLGAPIENYAPPKHWTRKQLRSMGRVSYLCVDAAEQALTDAGLLGDESITDG
                     RMGVACGSSSGSTKDIGDVGELLLTGTSRNFSANTYVRMMPHTTAANIGIFFGLKGRI
                     IPTSSACSSGSQGIGYAYEAIKYGLTDMMLAGGGEEFFSSEVYVFDSLYAASRRNGEP
                     EKTPRPYDANRDGLVIGEGAGIFVLEELEHAKRRGAIIYAELVGYGANSDAYHISTPR
                     PDAQGAILAFQTALQHAGLAPEDIGWINLHGTGTHHNDSMESRAVAAVFGNNTPCTST
                     KPQTGHTLGAAGAIEAAFAWGIADRQSNPEGKLPPQLWDGQNDPNLPAINLTGSGSRW
                     ETEKRITASSSFAFGGSNCVLIIG"
     gene            27921..27996
                     /locus_tag="ACFM72_000211"
     tRNA            27921..27996
                     /locus_tag="ACFM72_000211"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27954..27956,aa:Ile,seq:cat)
     gene            28071..28829
                     /locus_tag="ACFM72_000212"
     CDS             28071..28829
                     /locus_tag="ACFM72_000212"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC6256853.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            28830..29894
                     /locus_tag="ACFM72_000213"
     CDS             28830..29894
                     /locus_tag="ACFM72_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC6256854.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRENRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAH
                     QCVAARFTINHTADKLLDAI"
BASE COUNT         6983 a         8493 c         7803 g         6828 t
ORIGIN      
        1 tcccataaaa aaacggagca gatacctgcc ccgtttttat ttaatccgaa attttaatct
       61 aaatttagaa ttttgcaccg gattggtttg ccatatagtc aacagccgct ttgacttcgt
      121 catcgctcaa acctgcattg ccgcctttgg ccggcatcgc gttaaagcct tcaagggcgt
      181 gtttgtgcaa ggtttctttg ccttttttga tacgcggtgc ccaatcgtct tttttgccta
      241 tgccgggaat accgggaatc gaaccgccgt ggcacacctg acaggttgct tcgaagactt
      301 ttttaccgtc aacgccgacc gcaggggctg ccgcaccctt gtcttctgcc ttcgcttctg
      361 ccggagctgc actatcggca ggagcagaag ctgttcctga agcggcattg tcggcaggcg
      421 cagcctcatc aggattcggg aaagaaccgc cgcttttgtt cgccatgtaa gtaatcgccc
      481 gtttgagctc ctgatcggtc aggtctgccg caccgccttt ggcaggcatg gcgttaaagc
      541 cgttcagcgc gtgttggaac aaggtatcga agccttgcgc gatacgcggc gcccaatcgc
      601 cgttgtgttc cagtttcgga gcgttcggca cattgctgtc cgccgcgtgg cattggatac
      661 agattttgcc gaaaatctgt tcgccttggc gttcgccgac ggggatgccg tcgcccatcg
      721 tcaattgtcc gacaggctgg atacgggtct gcgttgctgc ttccgtagtg gcatcgacat
      781 cgccgaacga gccgctgccc gccagcttaa tcaggaaata aaggactgca ataacaataa
      841 cgataccgct cacaagggta aacagtgcag agccttgggc tttgttgtcg cggagttgtt
      901 tcatttggta ggcctcgccg tcaggttagg ttgtgctgta aattatagtt tggtgtgtta
      961 aacgcagtta acaatatttt gctggattat actgaattca cagggtcttt ccaatcgcta
     1021 tcattgaaaa tatgaaaaaa tttgccaacg gtatctgtat aaaacaaaca atcctttgaa
     1081 aataatggtt tatcctcaag aaaactctcc ttatgccgcc atacgccgcc tgccggcgca
     1141 agataacctt tgccaatttg cagaatttac gttaacctta cgttttccgc acccatagct
     1201 cagttggaag agtgtcagtt tccgaagctg gaggtcacag gttcgatccc tgttgggtgc
     1261 gccaattata aagagaccgt ctgaaagata aatatttttc agacggtctt ttgacttact
     1321 tcaaactctt atttcaagac ttccgcaaat gcgcgggcaa catagtcggt attcgacgta
     1381 ttcagtccgg cgacgcacat cctgccggaa tccagcaggt aaacggcaaa ttcgtcgcgc
     1441 agcctgcgga cttgttccac gctcaatcct gtgtagccga acatgccgcg ctgtttgatg
     1501 aaataagtga aatcgcgatc ggggatttgc gcagttaaga catcataaag tttctgccgc
     1561 atcgcacgga tgcggtcgcg catcatataa acctcgtttt gccacaaggc gtaaagttcg
     1621 gggctgttca tcacgtcggc ggcgatatac gcgccgtgcg cgggcgggct ggagtagatg
     1681 cggcggacgg tgaatttgag ctgtccgaac accaaatccg cttcttcctt attcgggcaa
     1741 accacgctca ggccgccgac gcgctcgccg tagagcgaca ggttttttga gaaggaattg
     1801 ctgacgaaca agggcaattc catttccacc gctttgcgga cggcgtaggc atcgctgtcc
     1861 aaatcgccgc cgaagccttg gtaggcgatg tccataaacg gaatcagttt gcgcgttttg
     1921 atgatgtgca acacttcgtc ccattgttgt tccgacatat ccacaccggt cgggttgtgg
     1981 cagcagggat ggaggatcag gacgctgttt tcgggcaggg tgttgaaaaa cgcggtcatt
     2041 tcgtcgaatt tcacgccgac ggcagcaggg tcgtaatatg ggtaagtgcc gacctcgaaa
     2101 cctgcgcctt caaaaatgcc gcgatggttg tcccaagtcg ggtcgctgac gtaggcgcgc
     2161 gcttcgggaa accagcggtg caggaagtcc gccccgactt tgagcgcgcc cgagccgccc
     2221 aaggtttgta cggtagcgat gcgtccttgc gcgagcgcag ggttgtcttt gccgaacaat
     2281 aaatgctgca ccgcgctgcg gtaagtgtcc aagccttcca tcggcaggta gggcgacggc
     2341 gcaggcgtgg cggcgcgggc ggtttcggca cggcgcacgg attccaacac gggcattttg
     2401 ccttcgtcgt cgaaataaat gcctatgctc aaattgactt tttcagggcg cgggtcgttt
     2461 ttgaaggttt cgaccaaact caaaatcggg tcgcccggat agtattcgat gtgtcggtac
     2521 atagtcctta ccttttactt tttcaaagga ttttcttttt caacaataca ccactttcga
     2581 tatggtgcgt aaacgggaat tggtcgaaca gggcggcgcg ttcgaccgca tgggtttcca
     2641 ccaaggtgtc caaattggca cgcagcgttt cgggattgca ggaaatgtag atgatgttgt
     2701 caaactgcga caccagcttc aaagtttcct catcgatacc ggcacgcggc ggatcgacga
     2761 aaatagtgga aaatgcgtaa tccgtcaaag caataccgcc atccttaagg cgtttaaact
     2821 cacgttttcc ggtataggct tcggtaaatt cttcagcaga cagacgggcg attttgatgt
     2881 tgcctatccc gtttgcctca atattccatt gcgccgcgct gatggaggtt ttggagattt
     2941 cggttgccaa aacacgttca aacttttcag ataaaggaag cgtaaagttg ccgtttccgc
     3001 aatacagttc gagcaaatcc ccatccaatc cttctgccgc accgcaggcc cattcaagca
     3061 ttttctgaca cacggcggca ttcggttggg taaaaccgcc ttcaatttgc cgataacgaa
     3121 aatcccgatt accgaccttt aaagtttccg ttacatagtc ctgtttcaag actattttct
     3181 gccccctgct ccgcccaata acggaagtat ccaactgttg ctgtaacgct tgcgccgcct
     3241 gcatccactc atcatcaagc cttttgtggt aaatcatggt aaccagcatt tccccgctga
     3301 gcgtagacaa aaattcgacg gcataccaac ggtttctcag ttcggcagat tgggcggcaa
     3361 cggcaattaa ttcgggcatc aggcaattga ctgcctctga agcagcatcg aagcggtcgc
     3421 aacggatcag gcttgccccg ccagccttct gccctttttc aaacatggcg taaaacattt
     3481 caccgccttc gtgccaaata cggaactcgg cacgcatacg gtaatgtttg tccggagatt
     3541 cgtacacttc ccactcagga acatccaaac ctgcaaaaag ggttttaagg tggtcttttt
     3601 tatcttgaag ctgctgcgtg tagtcgctca tatcgctatc ctgaaaaatc agaccggatt
     3661 ataagccgat tcactgcaaa acacgcaacc cctttaccgg catataaccc gttttcctcc
     3721 aacttttatg ctaaaatccg ccgtctccaa cataccgccg acagaaggaa aatatggcag
     3781 gcaacacttt cggacaactc ttcaccgtga ccacgttcgg cgaaagccac ggcgcaggtt
     3841 tgggctgcat catcgacggc tgcccgcccg gactggcatt aaccgaatca gacatccaag
     3901 ccgacctcga ccggcgcaaa cccggcacca gccgccacgt tacccaacgc cgcgaagccg
     3961 accaagtcga aatcctctcc ggcgtatttg aaggcaaaac caccggcacg cccatcgccc
     4021 tcttaatccg caataccgac caacgcagca aagactatgg caacatcgcc caaagtttcc
     4081 gccccggcca cgccgactat acctactggc acaaatacgg cacgcgcgac taccggggcg
     4141 gcggtaggag ttccgcccgc gaaaccgccg cccgcgttgc tgccggagcc gttgccaaaa
     4201 aatggttgaa agaaaaattc ggcacggaaa tcaccgccta cgttacccaa gtcggcgaaa
     4261 aaaaaatccg gtttgaaggc tgcgaacaca tttcccaaaa tccttttttt gccgccaacc
     4321 aaagccaaat tgccgagctg gaaaactata tggacagtgt gcgcaaatcg ttggattccg
     4381 tcggagcgaa gctgcatatt gaagccgcca acgtccccgt cggcttgggc gaacccgttt
     4441 tcgaccgcct cgatgccgaa atcgcctacg cgatgatggg catcaacgcc gtaaaaggcg
     4501 tggaaatcgg cgcaggtttt gacagcgtaa cgcaacgcgg cagcgaacac ggcgacgaac
     4561 tcaccccgca aggcttcctg tccaaccact caggcggcat cctcggcggc atcagcaccg
     4621 gacaagacat ctgcgtcaat atcgccatca aacccaccag ctccatcgcc actccgcgcc
     4681 gaagcatcga catcaacggc gaccccgtcg aactcgccac gcacggcagg cacgacccct
     4741 gcgtcggact gcgcgccgcg ccgattgccg aagctatgct ggcattggtt ttaatcgacc
     4801 acgccctgcg ccatcgtgcg caaaatgccg acgttcaggt taatacgccc gacattaccc
     4861 tttcaaacaa ataaaaattt agccaaaaca cagactttat aatagaatat cgagcattgc
     4921 cgtgcagcct tgacgcacgg gtttgtttag aggaatacaa ccgaaatgac acaagaaacc
     4981 gctttgggcg cggcactgaa atccgccgtc caaactatga gcaaaaagaa acagaccgaa
     5041 atgatcgccg accatatcta cggcaaatac gatgtattca aacgcttcaa accgttggcg
     5101 ctcggcatcg atcaggattt gattgccgct ttgccgcaat acgatgccgc actgattgca
     5161 cgcgtcctcg ccaaccactg ccgacgtccg cgctatctga aagccttggc gcgcggcggc
     5221 aaacgtttcg atttgaacaa ccgtttcaaa ggcgaagtta cccccgaaga acaggcgatc
     5281 gcgcaaaacc atcctttcgt gcagcaggct ttgcaacagc agtccgccca agctgcctcc
     5341 gaaacgccgt ctgttgaagc cgaagcagcc ggatcttccg cagcagaata aatccccaaa
     5401 cgaaatgccg tctgaaaacc gatttggttt cagacggcat tttttcgtat gcggcaatca
     5461 cggttcaaat atcgagttcc gccgtatcgc cttcgcgttc catccaggca cggcgggcgg
     5521 cggcttcgcc tttgcccatc agtttgacga agatgtcgcg tgtttcgtca tccgcgcctt
     5581 cggggatttg cacctgcaac aggcggcggg tgtcagggtg catggtggtg tctttgagct
     5641 ggtcggggtt catttcgccc aagcccttga aacggctgat ggaataggcg gtttctttga
     5701 cgccttcttt ttgcagccgc tccaaaatgc tgtcgagttc gttttggtcg agggcgtaga
     5761 atttgcgggc aggtttgctt ttgccttgtg cgttgacatc gacgcggaac agcggcggct
     5821 gggcgacgta gatgtgtccg tcggcaacca gtttcgggaa gtggcggtag aataaggtca
     5881 gcagcaaaac ttgaatatgc gagccgtcca cgtcggcatc ggacaggatg gcgattttgc
     5941 cgtagcgcag gccgcttaaa tcgggatggt cgttaatacc gtgcggatcg acgccgatgg
     6001 cgacggaaat gtcgtggatt tcggcgttgc cgaagagttg gtcggggtgg acttcaaagc
     6061 tgttgagcac tttgccgcgc aggggcagga tggcttgggt ggctttgtcg cgggcgagtt
     6121 tggctgagcc gccggcggaa tcgccttcga cgaggaagag ttcgttttcg cggatgtctt
     6181 cgctttcgca gtcggtcagt ttgccgggca ggacggcgac gccgctgcct tttttctttt
     6241 cgattttctt aaccgaacgc atccgcgcct gcgcctgacg gatggcgagt tcggcgattt
     6301 ttttaccgaa gtccacgttt tggttcagcc acaattccaa agggtcgccc gatacggcgg
     6361 caacgagttt caacgcgtcg cggttggtca gcttgtcttt ggtttgacct tggaactgcg
     6421 ggtcgaggac gcgggcggag aggacgaagg cggttttacc gaacacgtcg tcactttgta
     6481 ctttcacgcc gcgcggtagg aggttgtgca gattgatgaa attgttgacg gcgttgaaca
     6541 cggcttgttt caaacctgct tcgtgcgtgc cgcccagcgg ggtggggatg aggttgacgt
     6601 agctttcgtt ggcgcacgag ccttcttcca gccaggtcag ggcaaacgcc gctccttcgc
     6661 cgatgctgaa atcgccgttg tggccgtctg aaatgtagtt ttcgcaggag aacagcggca
     6721 cagcttcttg cgcgtcggca atcaggtcgg tcagatagct tttcaggccg tcggggtaat
     6781 gccaggtttg ggtgtgcgct tcgtcttcgc ctttgaccgg acgggtcagg gaaacgcgca
     6841 cacccggcag cagcacggct ttggcacgca gcaggcgttc gagttcggga atgctgtaat
     6901 tcgggctttc aaaatatttg ccgtccggcc agacgcgcac ttctgtaccg ctgtctttga
     6961 cggcgcattt gcccacttgt gccaacggtt cgaccacgtc gccgccggca aacacgatgc
     7021 ggtggatttt gccttcgcgt ttgaccgtta cctcaaggcg ggtggaaagg gcgttggtca
     7081 cggatacgcc cacgccgtgc aggccgcctg aaaaggcata cgcgctgccg ccgtcttttt
     7141 tgttgaactt gccgcccgcg tgcagacggg tgaacacgag ttcgactacg ggtacgcctt
     7201 cttcagggtg cagaccgacg ggaataccgc ggccgttgtc gcgtacggaa agcgaaccgt
     7261 cttcatgaat ttgcacgtcg attgccgtag cgaaaccgcc caacgcctcg tccgccgcgt
     7321 tgtcgatgac ttcttggcag atatgggtcg ggctgtcggt gcgggtgtac ataccgggac
     7381 gttctttgac cggttccaaa cctttgagga cggtgatgct ggattcgctg tattggttgt
     7441 ttttagccat aggaataatc tgaaagtaag aaaaacaacg ctttcagacg gcctgaaagc
     7501 gttgcgttcc gttgttttac cggttgccgg aaagttggcg ggcggcaaag tcttcataac
     7561 tttccatacc gcgcaggaag cgggaagaaa gttctttcaa tgcccccaaa taaacgtcgc
     7621 gtttgaaatc aatcacttcg tcaacgggcg cccaatattg gtgccaacgc cagccgtcaa
     7681 attcggggtg gcgggtggcg cgcaggttga catcgcaatc ccggccggtc aggcgcagga
     7741 gataccaaat ctgcttctgc ccgcgataag agccgcgcca ttcgcggcgt acccagttgt
     7801 tcggcacgtc gtaacgcagc cagtcgcgcg tccgcccgac gattttgacg tgttgcgaca
     7861 gaagtccgac ttcttcgtaa agctcgcggt acatcgcggt ttcggggctt tcgcccggct
     7921 tgatgccgcc ttgcggaaac tgccaagaat gttcgcgcac gcgcttaccc caaaagactt
     7981 cgtcgcggtt gttggttaag atgataccga cattggggcg atagccttcc ctgtccaaca
     8041 cggtgtcgcc ctccgttaaa ttcaatcttg ggattttccc acaaatcgaa cggttttgac
     8101 aaatcagacg gtatggttca agcatgtcga aacacagacg gactcgggaa aatatcttaa
     8161 atttggttta caataatgtg tttcaaatta ttcgggaatc agaccatgtt agacatccaa
     8221 ttgctccgca gcaacaccgc cgccgttgcc gaacggcttg cacggcgcgg ttatgacttt
     8281 gataccgcac gttttgacgc actggaagaa cgacgcaagt ccgttcaggt gaaaaccgaa
     8341 gaattacaag cctcgcgtaa cagcatttcc aagcaaatcg gcgcactgaa aggtcagggc
     8401 aaacacgaag aggcacaggc ggccatggat caagtcgccc aaatcaaaac cgatttggaa
     8461 caggcagccg ccgatttgga agccgtgcaa aaggaactgg acgcatggct gttgagcatt
     8521 ccgaacctgc cgcatgagga cgtgcctttc ggtaaggatg aaaccgaaaa cgtcgaagtc
     8581 cgcaaagtcg gcaccccgcg cgaatttgac tttgaaatca aagaccatgt cgatttgggc
     8641 gaacctttgg gtttggattt cgaaggtggc gcgaaacttt ccggcgcacg atttaccgtg
     8701 atgcgcggac aaatcgcccg tctgcaccgc gccttggcac agttcatgct ggatacgcac
     8761 acgctgcaac acggctacac cgagcattac acgccttata tcgttgacga tacgacgctg
     8821 caaggtacgg gccaactacc aaaatttgcg gaagatctgt tccacgttac ccgtggcggc
     8881 gacgaaacca aaaccaccca atacctgatt ccgacagccg aagttaccct gaccaatacc
     8941 gttgccgaca gcattatccc gtccgaacaa ctgccgctga agctgaccgc gcattcgccc
     9001 tgtttccgca gcgaggcggg ttcgtacggc aaagacacgc gcggtctgat tcgccagcac
     9061 cagttcgaca aagtagaaat ggtacaaatc gttcatcccg aaaaatcata cgaagcactg
     9121 gaagaaatgg tcggccatgc cgaaaacatc ctgaaggctt tggaactgcc ctaccgcgtg
     9181 attaccctgt gtaccggcga catgggcttc ggcgcaacca aaacgtatga cttggaagtt
     9241 tgggttcccg cgcaaaatac ctaccgcgaa atctcaagct gctccaactg cgaagatttc
     9301 caagcccgcc gcctgaaggc gcgtttcaaa gacgaaaacg gcaaaaaccg cttggtacat
     9361 actttgaacg gctccggctt ggctgtcggc agaacgctgg tcgccgtatt ggaaaaccat
     9421 caaaacgccg acggcagcat caacatccct gccgcactgc aaccgtatat gggcggtgtt
     9481 gccaagttgg aagtcaaata agtttgcagg ctgcctgaac gtcaaatgcc gtctgaaacc
     9541 tgtttcagac ggcatttcct ttaaactttt aaaacacgtc agccgtcggc acgaaccgca
     9601 ttgccgcaat cgccggtctg tccgacctcg cggatattgg acagcgtaac ttccgaaata
     9661 ttacccaacg cctcttccgt caaaaatgcc tgatggccgg taaacagcac attatgacaa
     9721 gacgacaggc ggcggaacac gtcgtcggta atcacatcgt tggatttgtc ttcaaaaaac
     9781 agctcgcgct cgttctcgta cacatccatg cccaatgcgc cgattttccg gcgtttcaac
     9841 gcctcaatcg cggcggcact gtcaatcagc ccgccccggc tggtgttgat aatcatcacg
     9901 ccgtctttca ttttgtcgaa cgccgcttcg ttcagcatat agtggttttc cggcgtggcg
     9961 gggcaatgca gcgtgatgat gtccgaccgg gcatacagct cgtctaaatc cacatatttg
    10021 ccgccgattt tttccgcttc ggggttgcaa aacggatcgt aagccagcag gttcatgccg
    10081 aaacccttta aaatccgcat ggttgcaata ccgattttcc ccgtgccgat aacgcccgcc
    10141 gttttgccgt acatattgaa accggtcaga ccttccagcg aaaaattcgc atcgcgggta
    10201 cgctgatagg ctttgtggat acggcggttc aacgtcagca tcagaccgac cgtatgttcc
    10261 gcaaccgatt cgggcgaata ggcaggcacg cgcacgactt tcaagcccaa ctcttcagcc
    10321 gcctttaaat ccacattatt gaagccggca caacgcaacg ccacagtttt cacgccaatt
    10381 tgcgccaatt tttccaacac gggccggctg ccgtcgtcgt ttacaaaaat acagaccgct
    10441 tccgcgcctt ccgccatttt cgccgttttc gcatccagca taaaatcaaa aaactccagc
    10501 tcgaagccga aatgccggtt ggcgcgggta aaatgttcgc ggtcatagct tttcgtaccg
    10561 taaatcgcaa tcttcatcaa tatgtccagt tgtcgtctat ggttgagaaa cggcataata
    10621 cactgaattc aaacaaatca gtagaatatg gtggattaaa attgattgca tgcacggcat
    10681 ttccatttca aaacacaaaa ctcaatcgcc cattgccgcc agaagctcgg cctgatgctc
    10741 ggcaatcagg gcattggtga tttcttccaa gtcgccgtcc atcacaaaat ccagcttgtg
    10801 cagggtaagg ttgatgcggt ggtcggttac gcggccttgg ggatagttgt aggtgcggat
    10861 gcgttcgctg cggtcgccgc tgccgatgag ggatttgcgc tcggcggctt ctttggcttg
    10921 ggcttcgcgt ttttgcgcgt cgttcaggcg ggcggcgagg actttcattg cctgcgcttt
    10981 gttggcatgt tggctgcggc cgtcttggca ttcgaccacc atgccggtgg gcaggtgggt
    11041 gatgcggacg gcggagtcgg ttttgttgat gtgctgaccg cccgcgccgg atgcgcggaa
    11101 ggtgtcgatg cgcaggtcgg ctgggttcag ttcgatgtct tccagttcgt ccgcttcggg
    11161 catgacggca acggtgcagg cggaggtgtg gatgcggcct tggctttcgg tggcggggac
    11221 gcgctgcacg cggtgtccgc ccgattcaaa tttcaaacgg ctgtacgccc cgagtccgac
    11281 aatacgggcg atgacttctt tatagccgcc caattcgctt tcgttggcgg acacgatttc
    11341 aacctgccaa cggttgcgct cggcgtagcg gctgtacata cgcagcaaat cgccggcaaa
    11401 cagcgcggct tcgtcgccgc ccgttccggc gcgtatttcg atgaagatgt ttttgtcgtc
    11461 gtcggcatct ttgggcagca gcagtttttg cagttcggta tcgagttcgc cgattttggc
    11521 tttggccgct tcgatttctt cggcggcaaa gtctttcatt tcggggtcgg acaacatttc
    11581 ttcggcatcc gccaagtcgc tttgggcaag ccgatagttt tggaacactt cgacgacggg
    11641 ggtcagttcg gcgtgttcgc gcgtgagctt gcggtagttg tccatgtcgg acgtggcttc
    11701 gggctgtccg agaaggtggg taacttcttc cagtcggtcg ctgagttgtt gtagtttttc
    11761 taagatagac ggcttcataa ttcttccata acaaacgccg cctgaatgtt cagacggcat
    11821 caacactgga ttattataat aggttttccg gatattcaaa aagataatct tagatggata
    11881 acctaccgtc ccaacagggc atcggcattg cgctccgtta cctttgcaat ctcttctaca
    11941 caggttccgc ggatttccgc agcaatcttt gcaatacccg gaatattggc aggcgtatta
    12001 atctcttttt tcagcataaa cgggctatcc gtttccaata cgaaatcccc gtcgttcaag
    12061 gctttaagcg tatcgcgcac tttacgcgcg ttcggattga gcagcagcga accgatgccg
    12121 attttgaaac ccagtttcgt caacacacgc gcttcttccg cgctgccgga gaaggcgtga
    12181 acgatgccgc cttgggcaaa gcctgtctgt ttgacggcgg cggcgatgtc ggcggtggct
    12241 ttgagattat ggataatcac gcggcggcgc agggtttgcg caatttcaag ctggcggacg
    12301 aaaacttgaa tttgccgttc gcgctgctgc gacgtttggg ttttatcgta aaaatccaag
    12361 ccgatttcgc cgacccatgc ctgcggataa tgtgccaaca tcgtttccag gcggacgaaa
    12421 tcccgctcgg caatgccgtc tgaaaaccaa ggatgaatgc ccagtgcaat acggatttga
    12481 ccgtgttcgg acggcatttc cgccaaatcc gccacgtcct gccaatcctg cgggcgcgtc
    12541 gcgggaacga taaaccgctt caccccaact ttccgcgctg cggtcaggat gtgcggcagg
    12601 ttttcgcgca gggcgggatc agcgagatgg cagtgggtgt cggtgaagtt catttcgatt
    12661 tcacactaac tttagtctta ccaattcttt gtaaacatct tccttacccc agccttgcga
    12721 tacggcgagg gtcatcagcg cggtggcggt ttcgaggttg catttgccgc cgttgatgat
    12781 gcccgagttg cggaacgcgt tgccttgcgc gtaaacggcg gcggttttgc cttgtcggac
    12841 ttggctgatg ttgagcagca gtttgccctg ccgcgcgaag tctcggacgg cgcggataaa
    12901 accttcgtct gcgggcgtgt tgccgtgtcc gtagctttgc aggataagag cttgggcggg
    12961 aagctgtccg agtccgtccg caagttcttg gacggcaaag ccggggataa gcgtgcggac
    13021 agcgattttt gcctgcgggt cgggataacg gattttgagg ccgtctgaaa cggctgctgc
    13081 gtcttgggac gggaggcgaa gattgtgcca accccgggtt tcgtcccatt cggcaagcgt
    13141 gccgaaatgc ggattgtcga agcctgcagc agtttcggtg ctgactttgc tgctgccgac
    13201 ggcgggatac agtttgccgt caaacgcgat gacggtttgt ttgagcttga ggctgaaggc
    13261 ggcaacggcg gtggagaggt tgcgcggggc atcgctgttt tcggcggcgt aaggccattg
    13321 ggaaccagtc aggacaatcg gtttgcccaa accttgcaga gcgagcgcga ggagattggc
    13381 ggtgtacgcc atgctgtccg tgccgtgcag tatcaggatg ccgtcgcatg aagggagttt
    13441 gtcggcaatg atgtccagcc aatcgcgcca gtgttgcagc gtaacggagg aggaatcaat
    13501 caagggattg cagacgtgcc actcgaaatc gaggccgtct gaaaaggggg aaagggcttg
    13561 gctaaccagt gcggtatcgg ggcgcaggcc ttcgctgctt tgggtcatgc ctatggtgcc
    13621 gcctgtgtag aggacgaaga ttttttgttt catggacatc atcgggtcgt ctgaaaataa
    13681 taatacggct tatttaacta tatttcggac agactggcaa tttggcggcg cggacggttt
    13741 tcagacggcc ttcaaatgaa aaagcacccg agggctgtcg atatttgatt ttccaagtag
    13801 atttttattc acgaaatagg agagccgcaa caagcttaaa tcccttgtga ggttcccaac
    13861 acggaagata ccgctttgtg gattaaaaaa tacggaaact attgaatatc gacaacctat
    13921 ttaggtgctt gattttattg tttgctttgc gcggcttttt tggctgcctt ggcggctttg
    13981 cgttgcgccc gcttttcttt caatttgctg cggtaaaact ggatacgttg gcgttttttc
    14041 caccaaatcc aagcgacaac ggtcgcacct atacccaaga taacaaaaat acccgattgc
    14101 aggctgtgca ttttcgccat cagccaatcg atgttgtgcg caccgtattc gcccagataa
    14161 atccaaatag ggacggaaat cagcgcggca agcccgtcca taatcagaaa gcgcagatac
    14221 gatactttgc ggctgatgcc ggcggtaacg aaaacggcag tccgcaaacc cggcaggaag
    14281 cgggcgacaa acagaaccca gttgccgtat ttgtcgaatt tttcctgaac ctgtgcgtaa
    14341 cgtttcggcg tcatgatgcg cgcaatcggt ttgaacttga ggattttctg cccccaaatt
    14401 cgtccggcgg cgaacatgat gccgtccccg accaatacgc cgagcatacc gactgcaaac
    14461 ataatatgcg gattggtata acccataccc gaaatcacgc cgcctgttac caaggtcaaa
    14521 tcctcgggga tcggcacgcc gaaaccgcag atgaccaaaa cgaaaaacac ggccgcatag
    14581 ccgtattcga caaaaaaggc ttccaaaagg gcaaacatag cggatattcc attgtcggag
    14641 ataaaaagtc agaacaagcc gaaacatttt ctgcgcgaaa cggcattcta tcaaagatta
    14701 tgccgtctga aagcggcaag gggcagattc gcgccctctg ccggacgttc agacggcatt
    14761 taaacaggaa aaccgccgct gttgaaacgg ttttgcctga ttttgcctaa aggctgccga
    14821 tggcggaagc aatacgttcc gcaccgtcgc gcgcccaatc cgcctgccgc gcctccacca
    14881 tcacacgcac gacgggttcg gttcccgaag cgcgcaacac gacacgccct ttgccttcga
    14941 gttctttttc cacttccgcc aacacgcctt ttgaggcttc ctgccagttt tgccctttgc
    15001 cgatacggac attaatcatc gtttgcggat acggctgcca gtcggcgcaa acggtggcga
    15061 ggtcttggtt cagcgtttgc agtgccgcca aaacttgcag cgcggaaata atgccgtcgc
    15121 cggtgttgtg tttgtccatg cacaaaatat ggccgctggc ttcgccgccg atgagccagc
    15181 cgcgttggtt cagctgttcc aacacatagc ggtcgccgac tttggcgcgg cagaaatcca
    15241 cgccctgctc tttcagggcg atttccatcg ccatattggt catgaccgtg ccgaccacgc
    15301 cgccgatgtt gataccttct cgggcgcggg ctttagcaat gacgtaaatc aggctgtcgc
    15361 cgtcgtaaac cttaccgttt ttatcgacca tcatcaggcg gtcgccgtcg ccgtctaagg
    15421 cgatgccgta gtcggcttca tgctgtaaaa cggcagcctg gagtgtcttg gtataagtcg
    15481 caccgcattt ttcgttgatg ttgtagccgt tgggttcgtc gccgatgctg acgacctgtg
    15541 cacccagttc gtgaaacacc ttgggggcga caccgtaccc cgcgccgttg gcggtatcga
    15601 taaccaagtt caaaccccga aggtcggaat ggctgggaaa ggtggatttg caaaattcga
    15661 tatagcggtc gtccgcacca ctgatgcggc gtgcgcgccc gaggcgtgca gaaggctggg
    15721 ttttcatttc ttcgtcgatt ttggcttcga tttccaactc gatttcatcg gaaagcttca
    15781 cgccgccctc ggcaaagaat ttgatgccgt tgtcaaaata agcattgtgc gacgcggaaa
    15841 tcatcacacc ggcggacaaa cgcagcgcac gggtcagata agccacgccg ggcgtgggca
    15901 gcggtccggt ctgtaccaca ttcacacccg ccgccgtaaa accggccacc aaagcggctt
    15961 ccagcatata accggaaata cgcgtatcct tgccgattaa aacggtcggt ttctggtcag
    16021 tgtcgtgctg aaccaaaacc tgacccgccg catagccgag tttcaataca aaatcgggcg
    16081 taatcggaaa ctgcccgact tcgccgcgca cgccgtccgt gccgaaatat ttttttgcca
    16141 tgtgttgctc cgagaatgtg aaccgttgtc cgagattata cagtcagttt gtgccttgct
    16201 gtctgcaccg ttgatgccgt ctgaagccgc cccgcccttt tcagacggca tgaagtatgc
    16261 gaaccgctgt ttacagattg atgcccaacg cttcccatgc cttcaacgca tccgccgtcg
    16321 ccttcacatc atgcacccgc acgatttgcg cgccgcgcgc cacggaagcc agtgccgccg
    16381 ccacgctgcc gtgtacgcgc gccgccgcgt cggtttcgcc ggtcagctcg cctatcatgc
    16441 gtttgcgcga tacgccgata agcagcggaa agcctgtttc tgccatcaat tcgggtaaat
    16501 gccgcatcag tgcgatattg tgttgcaggg ttttgccgaa gccgaaaccg gggtcgagtg
    16561 tgatgcgttg cggggcgatg cctgccgcaa cacaggcttc tgaccgtgtt ttcagataac
    16621 gtgccacttc accgacaaca tcctgatatt tcggattaat ctgcatgttt tcaggcaaac
    16681 cctgcatgtg catcaggcaa atgcccgtgt ccgcctgacg cgccagcaat tcgaccgcgc
    16741 cttcgtcggt caacgccgcc acatcgttaa taatatcgat gccgccgagt gccaacgctt
    16801 tttccataac caccgtgcgg cgcgtgtcca aactgacggg aacgccccat cccgcgactt
    16861 ctaccaatac aggctcaacc cgcgcccatt cttcttcgga cgaaacataa tccgcacccg
    16921 gccgcgtcga ttcgccgccg atgtcgagaa tgtccgcacc ctctttcaaa agccgttcgg
    16981 cgtgcgccaa agcggttcgg gcattttgcg aatacgcgcc gccgtcggaa aaagaatcgg
    17041 gcgtgagatt cacgataccc atgattttcg gtttgtccaa accgatttca aaccgtcctg
    17101 cctgccaaac gtgtcgtgcc atctgaactc ctcccaaaat aaaaaacaga ttatatgccg
    17161 tctgaaaccg tcttgtgcgc ttcagacggc accgctattc gggcggcaga cggcatgttg
    17221 tccgaatgtc tgctccgcct ttgaatctgc cggtatgcct gctatccgcc cgacttttca
    17281 aaacaggttc cgacgattcc gcacgcgcct gccgcctttg ccaagccgta caggatttcc
    17341 tgcggcatat cgcggttcca taatcccgta atattcgcaa tcacgggcag atggctgatt
    17401 tggcggactt tcacgatgga ttcgacatcc aaacggtagg gatggccttt ggtatggttc
    17461 aatacgcccg actcgcccag aatcaggtgg cggttgccgc gcgagacgac atattctgcg
    17521 gcattcaacc aatcttcggc agaatggtgc ttgtctttac acagcaccaa gggaatgttc
    17581 aggtttccgg cttcattcaa tacggcaaga tcggacatca gcccgccgcc caaatacagg
    17641 atgtccgccc ccgcattcaa agccgcttcg acatggcgga cgttgcggac gcgcaccaat
    17701 acgggtttcc ctgcatcatg cgccgatgcg gtctgttccg ccaaccgtct gcaccgtccc
    17761 cgcccttcat ccgcacttga agtgtcgtat aagtttgccg aagtgaaaaa cggatccaga
    17821 aacactgcat ccgcattgcg ccatactgac ggttctgcgg cgatacggac ggtttccccg
    17881 ccgccgaaag ccacgccttt ggcggcaacg cggctgtctt ccgcccgatt ttcccgactg
    17941 acggttttcc atgtatccaa aatgcggacg gctttctcga cctccggcag cgtctgcacc
    18001 tccctgacgc tcaaaaccct atcgtcgccg attgcgccga tgacagtacg ctcgtcgccg
    18061 tgagaaatgt gttctcgcag acctctgctg cggataaagg cgacaacgcc ggcaatgtcc
    18121 gcttcggcgg cacgcctgct catgacaata atcatatttc ctcctgacac aagaaacggc
    18181 ctacccaaaa taggattttt gcaagccgtg ttatactgtg gcgtgtttta cagattgttc
    18241 gggctatgga tttattatcg gttttccaca aataccgtct gaaatatgcg gtggccgtgc
    18301 tgacgatact gcttttggcg gcagtcgggc tgcacgcttc cgtatatcgc accttcacgc
    18361 ctgaaaacat ccgcagccgc ctacaacaaa gcattgcaca cacacaccgg aaaatctcgt
    18421 ttgatgcgga cattcagcgc aggctcctgc cccggccgac cgtcatcctg aaaaacctga
    18481 ccattaccga acccggcggc gaccagactg ccgtttccgt ccaagaaacc aaaatcggat
    18541 tgagctggaa aaacctgtgg tcggatcaga tacagattga aaaatgggtg gtttcgagtg
    18601 cggaacttgc cctgacgcgc gacgggaaag gtgtttggaa catccaagac ctgatcgaca
    18661 gccaaaaacg ccaagcctca gtcaaccgca ttatcgtcga aaacagcacc gtccgcctca
    18721 atttcctgca ggaacagctt atcctgaagg aaatcaacct caacctgcaa tcccccgatt
    18781 cgtcggggca gccgtttgaa agttcgggca tactggtttg gggaaagctg tccgtcccgt
    18841 ggaaaagcag ggggctgttc ctttcaaacg gcatcggccc gcccgaaatc tcaccgttcc
    18901 attttgaagc ttccacttcg ctggacggac acggcattac catttccacc accggcagcc
    18961 cttctgtccg cttcaacgcc ggcggagcgg atgccgccgg cctcggcctg cgtgcagaca
    19021 cttccttccg caacctccac ctgaccgccc aaatccccgc gctggcactc aggaacaaca
    19081 gcattaaaat tgaaaccgtc aacggcgcat ttaccgccgg cggcgaatat gcccgatggg
    19141 acggttcgtt caaactcgac aaagccaacc tgcactccgg catcgccaac atcggcaacg
    19201 ccgaaatctc cggcagcttc aaaacaccgc gccaccagac caacttctcc ctcaattcgc
    19261 cgctcgtatg gacggaaaac aaagggctgg acgcgccgcg cctgtatgta tcgacccttc
    19321 aggataccgt caaccgcctg ccgcaacccc gtttcatcag ccggctcgac ggttcgctgt
    19381 ccgtaccgaa tctgcaaaat tggaatgccg aattaaacgg cacattcgac cgccaaaccg
    19441 ttgccgcgaa attcagatac acacatgaag acgcaccgca tctggaagcc gccgtcgcac
    19501 tgcaaaaatt gaacctgacc ccctatcttg acgacgtgcg gcaacaaaac ggcaaaatat
    19561 ttcccgacac cctcgccaag ctgtccggcg acatcgaggc gcacctgaaa atcggaaaag
    19621 tccaacttcc cggcctgcaa ctggacgata tggaaaccta cctccacgcc gacaaaggcc
    19681 atatcgcgct cagccgtttc aagtcagggc tttacggcgg ccataccgaa ggcggcatca
    19741 gcatcgccaa cacccgtccc gccacttacc gcctgcaaca gaatgcaagc aacatccaaa
    19801 tccaaccgct gctgcaagac ctgttcggct tccacagctt cagcggcaac ggcgatgcgg
    19861 tcatcgacct gaccgcgggc ggcgaaaccc gaaaagagct tatccgctcg cttcagggca
    19921 gcctgtcgct gaatatttcc aacggcgcgt ggcacggtat cgacatggac aatatcctga
    19981 aaaacggcat ttcgggcaaa actgccgaca atgccgcacc cagcacaccc ttccaccgat
    20041 tcacgctcaa cagcgaaatt tcagacggca tcagccgcca catcgatacc gaactcttct
    20101 ccgacagcct ctatgttacc agcaacggct ataccaatct ggatacgcag gaattgtctg
    20161 aagatgtcct tatccgcaac gccgtccatc cgaaaaacaa accgattccc ctgaaaatca
    20221 ccggtacggt ggacaagccg tccattaccg tcgattacgg caggctgacc ggcggcatca
    20281 attcgcgcaa agagaaacag aaaatcctcg aagacaccct gctggaacaa tggcagtggc
    20341 tcaaacctaa agaaccgtaa acatcctgcg tacaaaaatg ccgtctgaaa cacccccgcg
    20401 cttcagacgg cagaccgtaa aacctacaac cccaattcct cccaaatccc atcaatctta
    20461 gccgtaaccg cagggtcttt tttgatgacg cgtccccatt cgcggtcggt ttctcccggc
    20521 catttgttgg tcgcatccaa acccattttg ccgccgagtc cgctgacggg gctggcgaag
    20581 tcgagatagt cgatgggcgt gttttctacc aaaacagtgt cgcgcacggg gtccatgcgc
    20641 gtggtgaccg cccagatgac ttctttccag tcgcgcacgt tcacatcgtc atccaccacg
    20701 ataatgaatt tggtatacat aaactggcgc aggaacgacc agcagcccat catcacgcgc
    20761 ttggcgtgtc cggcgtactg ttttttcatg ccgatcaccg ccatgcggta ggaacagcct
    20821 tcgggcggca ggtagaaatc ggtgatttcg gggaactgct tttgcaaaag cggtacgaac
    20881 acttcgttca atgccacacc caaaacggca ggctcatcgg gcggtttgcc cgtgtaggtc
    20941 gaatggtaaa tcgggttttc gcgcatggtg atgcgttcga ccgtaaacac agggaaatga
    21001 tcctgctcgt tgtaatagcc ggtgtggtcg ccgtacgggc cttccaacgc ggtttcgttc
    21061 ggatgaatca cgccttccaa cacgatttct gcgcgtgcag gcacttgcaa atcgttgccg
    21121 atacatttca ccagctccgt ccgcgaaccg cgcagcagtc cggcaaactg gtattcgctc
    21181 aaggtatcgg gaacaggcgt taccgcgccc aaaatggtgg cggggtcgca gccgagcaca
    21241 acggagacgg gatacggcgt atcaggattg agtttgcgga attcctgata atccaacgcg
    21301 ccgccgcgat gcgacagcca acgcataatc agcttgtttt tgccgatgag ttgttggcgg
    21361 taaatgccga gattttggcg ttttttgtgc ggcccgcgcg tgacggtcaa gccccatgtt
    21421 accagcggcg caacgtcttc cggccagcaa tgctgaatcg gaagttgata caaatcaacg
    21481 tcttcacctt cccacacaat ttcctgacac ggcgcgtttt tcaccacgtt cggcgccatg
    21541 ctccaaatgt ctttcagcag cggcagtttg gaaaacgcgt ctttgatgcc tttgggcggt
    21601 tcgggttctt tcaaatacgc cagcgtctgc ccgatttcgc gcagcttgga cacgctgtcc
    21661 gcgcccatgc ccatcgccac gcgttcgggc gtgccaaaca aattcgccaa cacgggataa
    21721 tcgtagcgcg taccgtcggg cttaactggg tgttcaaaca acaacgccgg cccttcggcg
    21781 cgcaacacgc ggtcggcgat ttcggtcatt tccaaatgcg gggaaacagg atgcgcgacg
    21841 cgcttgagtt tgccctgctg ctcgagcata gcaatgaagt cgcgcaggtc tttgtatttc
    21901 atatttatcc tttttgtcct tttatcctga acaatccgat tcggataccg cccctatcct
    21961 tgcctgtgct tcggcatatt ctatgccgtg ataaaagtcg cgtaccagcg gatgttcgct
    22021 gccttgatgg agttgcaaca aaggacgttg gccatcgggt tgggtaacga cattgcaatg
    22081 caaaccgaag gtgtcggttt cataaggggg cagccggttg cagatcatgc cgaaataaac
    22141 gacattttcc ggattgtcgt gaaagtggct ttgatagtcg ttaaaactct tttcgctgac
    22201 ggacacccac acgccgtatt ccagcgtttc ctcatgcccg ataatcggca taggcagcac
    22261 tgcgcggata aagcggtcgg tttggtcggg ataacggatg atgcagaaat cgccgccgca
    22321 ttcagcttgg taagcaatgc gttcttcttc actgagttga ttatagggat cgggggcggt
    22381 aaagccgatt gcgggcatat cttcatgttt ttcgccgcag gaagtgcaag tgtacataag
    22441 gtttcagact ttcaaaacga gtttgcggta aagccattcg ccggcaaacg gcatccccat
    22501 caatacatag gcaatcacgc cggtataaac cgcccaccaa tcatatcgcc ccaaccgtgc
    22561 caacaaagcg gcaagcgtcc cgttggcaat aaagaatacg caccaaacct gcgttacccg
    22621 gcgggtatag cgcacggctt tttcaggcag gtcgggctgt tgcagccgcg cgagcctttc
    22681 tatgaccgtc tgtccggcaa acaggctgcc gccgaacacc gccaacatca tcagattgac
    22741 gaggacggga taccaataca tcgaatcatg ccgcccgaac accaatactg cggcaaaaaa
    22801 cagtgtaata aacaaagccg cataacgctg ttggggcagt ttggcagtca gggcgcgcag
    22861 cagccacaac ccgcacatcg ccgccgccag ccagacaaac cagcccgcct ccctgccgta
    22921 atatagtgga ttaacaaaaa ccagtacagc gttgcctcgc cttgccgtac tatctgcggc
    22981 ttcgtcgcct tgtcctgatt tttgttaatc cactatacca caaagcggga taggcaatgc
    23041 ttaatacggt cagaaaaata tgtccgaaaa aaccgggttt cattttgaat ccgcacaaat
    23101 gttttcagac ggcatccgat aaaaacatgc cgtctgaaaa ataattagaa atacccgatt
    23161 agcccgcctg aatcttcaat accgcctgta ccacgtcgtt gacggtgcgg atattgcgga
    23221 aatcttcagc ctgcagcttg cggccggttt cgcgcttgat gcggtcaatc aggtcgatgg
    23281 catcgatgct gtcgatttcc aaatcttcgt aaagattggt atcaggcgta atccgttccg
    23341 gttcgatttc aaacaactcg gtcagggtat cgcgcaacaa ccggtagatt tcttgttcgg
    23401 tcatatgttt catccttatg cttggcggct tttgacaaag gcggcgagtg ttttgacatt
    23461 ggcaaaatgt tcgcgcaagt tctcctgctc gccgtccaat cggaaaccga aatgtttttg
    23521 caccgccaag cccaattcca gcgcatcgac ggaatccagt cccagccctc cgtcgccgaa
    23581 cagcgcgtct tcgctgccga tgtcggcggc ggttatatcc tccaaagcca aactgtcgat
    23641 aatcagttgt ttgatttggt tttccaagtc gttcatatgg ttttccttgt aaaatagtcc
    23701 tgcagatatt cattcagccg ccgcgccgca atcggcaacg gtttctcggc gagccagtct
    23761 tgggggagga tgtcgtctcc gacggtaatt tcataccgta tccttttcgg ggggatgcgg
    23821 taccacggct gccccttttt aaaattgggc ggattcattt tgatacatac gggcgtaatc
    23881 acttcggcat accgcagtcc caaagaaacc gcgccccggt gcatttttac ccgtccgtcc
    23941 caccccgtcc tcgttccttc ggggaacacc agcaggctct gcccgctgtc aaaaaccgcc
    24001 tttaccgttt ccagcattgc ttccgactct tcgttcggaa tatagcccgc acctttaatc
    24061 tggctgctca ttgccggatt gtgctgcaaa tcttttttca cgatacagtt catttcgggc
    24121 acatggccga caagcagcac cacatccagc aaagacggat ggtttgccaa aatcaactgt
    24181 cccgggcggt tgagtttttc aacacccttg aacgatacct ccaacacgcc cgaccatttc
    24241 agataagcaa cgaacaaacg ccaagatgtt ccgataatcc ggcgcgccgc caattggcgg
    24301 gcgacagacc ctgaagtgcc gttcaaagta taaggcaaca aaaccaattt catcataatg
    24361 ccgccgacac cgaaaatcac aaatcctaac caagtcgcaa aaaaacggcg gcaataatcc
    24421 aatttatcca ttccgctgcc acagccattc acgattgcga tatacccggc ggcattctcg
    24481 actgccgttc agcagaaagc gcacccattc caaaccgctc caatatgcct cgggcagcat
    24541 accggcttca gacggcatat cgtccgaagc agacaaagtc aggctgtaac gcgtcccttt
    24601 ggtcagaacc atcgccaaag cataagcaaa cggcgcgcga gtcgccgata cggcatatcc
    24661 ttccggcagc ggatcgtccg ccgccaaaac caaaaccgac ccgcatccct cttccaacag
    24721 tgatgccgct tccgccaatg ccgtttccac accgtcggca cacacggcca atgccgtctg
    24781 ctcgctcata tcctgacgca atatcgacca ttgccccgcc gttgcattgt gcaccgacaa
    24841 accgaacgaa gtcggcgaca cggtatgcga tttcaacagt tccaaccaca aatcgaaact
    24901 gcgtgccatt tccccgtcgt gcgaggcata aactaccgga ctgccgggat gggcggaggc
    24961 aatgtcccaa gccgcgtcgc ataccaaacg cgccgcctta ctcaaacggc ggcgctgcat
    25021 agcgggcagg aacggcaatt ccggcctgac atcgggcaaa ccgtcggcaa aatccggaca
    25081 ttccgcccat tttgcccact gggccatatc gcgcattttg ctgcccgaaa cccgccaggc
    25141 ggcgatgtcg aagtggaacc ggcaaataat cgacggcata gtttctttca aaaatttaca
    25201 ctgtgccgca ttctaaccaa agcctatccc cctgacaatg ccgaaattca aacgcatttc
    25261 tgcccccttt ctccgacaac gccgcccctc ggaaaaccgc cagaattagc ctgaatttac
    25321 atttatcatt ataatgcccg tatttgccag cctgccgccg caatatatgg acacactgcc
    25381 agaatgcccg attaccaaca ccgcctccct gctgccgcac agcgggcgta tggttctgat
    25441 agaccgcatt acccgatacg gcgatgattt tgtcgaagca ggggcacagg taagccccaa
    25501 tcacatcctt ttacttgacg acaaactgcc ctacacggca tttatcgaac tgatggcaca
    25561 ggctgtcggc gcgtatgccg gtatccaagc ccgaaaaaac gcacggtcgg tccggctcgg
    25621 cttcctgctc ggcacgcgca aacttgaaat cttcgcccaa tccgtcccaa tcggcacgca
    25681 tctgctggca acggcgcata tgtctattca ggatgccggg ggtatgggcg tgtttgactg
    25741 cgaactgcgt tggacagacg cgccggaaac ttcgtccgaa acactccctt cagacggcat
    25801 tttggtgcgc gcctcactca acgtgtacag ccccgaacac cctgccggaa caaccgatgc
    25861 cgtctgaaca ggcacacaca tacggagaac aacgatgacc gaaactgtcc tgattaccgg
    25921 ctccaacagg ggcataggca aagccgtcgc attcggtttg gcggaagacg gctttgatat
    25981 cgctgtccac tgccgcagtc gccgcgacga agccgaagcc gtggcggaag aaatccgcgc
    26041 tttgggcaga aatgcgcgcg tgttgcagtt tgacgtgtcc gaccgcgaag cctgccgcga
    26101 gattctgacc gccgacatcg aagcaaacgg cgcgtattac ggcgtggtgt tgaacgccgg
    26161 actgacgcgc gacaatacct tccccgcgtt ttcagatgac gattgggatg tggtgctgcg
    26221 gactaatttg gacggttttt acaatgtatt gcatccgctg gttatgccga tgatacgccg
    26281 ccgcaaagcc ggacggattg tgtgtatggc atcagtgtcc ggcctgacgg gcaaccgcgg
    26341 gcaggtcaat tacagcgcgt caaaagcagg cattatcggc gcggcaaaag ccttggcggt
    26401 cgaactggcg aaacgcaaaa tcaccgtcaa ctgtgtcgcg ccgggtctca tcgataccga
    26461 tattatcgat gagaacgtac ctgtcgaaga aatcttaaag gctgtccccg cagcgcttat
    26521 ggggctgccg gaagaagtgg cgcacgcggt gcgtttcctg atggatgaaa aagcggcgta
    26581 catcacgcgc caggtgattg cggtgaacgg aggtttgtgt tgaataccag aagggtcgca
    26641 gtaacaggca taggcggcat taccgccttc ggccgggatt ggcaaagcat acaggcagca
    26701 ttcaaagccg aaaaaaacgc cgtcaaatat atggattggc acgaacgttt ccccgaattg
    26761 gaagcgcaac tgggtgcgcc gattgaaaat tacgcgccgc cgaaacattg gacgcgcaag
    26821 cagctcagaa gtatggggcg tgtgtcgtat ttgtgcgtcg atgcggcgga gcaggctttg
    26881 acggatgccg gtttgctcgg ggacgaaagc attaccgacg gacggatggg cgttgcctgc
    26941 ggctcttcca gcggcagcac caaagacatc ggcgatgtgg gcgaattgtt gctgaccggc
    27001 acgtcgcgca acttcagtgc caacacctat gtgcgtatga tgccgcacac caccgccgcc
    27061 aatatcggca tctttttcgg gctgaaagga cgcatcatcc cgacatcgag cgcgtgttcg
    27121 tccggcagcc aaggcatagg ttatgcctac gaagccatca aatacggtct gaccgatatg
    27181 atgctggcgg gcggaggcga agaatttttc tcgtccgaag tgtatgtttt cgactcgctt
    27241 tatgccgcca gccgccgcaa cggcgaaccg gaaaaaaccc cgcgcccata cgacgcgaac
    27301 cgcgacgggc tggtcatcgg cgaaggcgcg gggattttcg tgctggaaga attggaacac
    27361 gccaaacggc gcggtgcgat aatttacgcc gaactcgtcg gctacggagc caacagcgat
    27421 gcctaccata tttccacgcc ccgccccgac gcgcaaggcg caatccttgc ctttcagacg
    27481 gcattgcaac acgcaggtct tgcgcccgaa gacatcggct ggattaatct gcacggcacc
    27541 gggacgcacc acaacgacag tatggaaagc cgtgccgttg cagcggtttt cggcaacaat
    27601 acgccctgca cgtccaccaa gccgcaaacc ggacacacgc tgggtgcggc gggcgcaatc
    27661 gaagccgcgt tcgcgtgggg cattgccgac cggcaaagca atcccgaagg aaaacttccg
    27721 ccccagcttt gggacgggca gaacgatccg aaccttcccg ccatcaacct gaccggcagc
    27781 ggcagccgct gggaaaccga aaaacgcatt accgccagct cgtcgtttgc cttcggagga
    27841 agcaactgcg tcttaatcat cggatgaaat aagtttgtca atcccaccgc tatgctatac
    27901 aatacgcgcc tactcttgac gggtctgtag ctcaggggtt agagcagggg actcataatc
    27961 ccttggtcgt gggttcgaac cccaccggac ccaccaattc ccaagcccag acgtatgttt
    28021 gggctttttt gccgccctgt gaaaccaaaa tgctttgaga aaccttgata atgaaaaaag
    28081 tcagcgtatt gattgttgcc aaaaacgaag caaaccacat tcgggaatgt attgaaagtt
    28141 gccgtttcga taaagaagtt atcgttatcg acgaccacag caccgacaat actgccgaaa
    28201 ttgccgaggg tttgggtgca aaagtcttcc aacggcattt gaacggggat ttcggagcgc
    28261 aaaaaacatt tgccatagaa caggcaggcg gagaatgggt tttcctgatt gatgcagacg
    28321 aacgctgcac gccggaacta tctgatgaaa tctcaaaaat tgtccaaacc ggcgattatg
    28381 ccgcctattt tgtcgagcgc cgcaaccttt tccccaacca tcccgccaca cacggcgcga
    28441 tgcgtcccga cagcgtatgc cgtttgatgc cgaagaaaga cagttcggtg caaggcaaag
    28501 tacacgaaac cgtacaaacc ccctacccca aacgccgtct gaaacatttt atgtaccatt
    28561 atacgtacga caactgggaa caatatttca acaagttcaa caaatatact tccatctcag
    28621 ccgagaaata ccgagagcag ggaaagcccg tgcgtttcgt tagggacatt atcctccgtc
    28681 cgatttgggg ttttttcaaa atttatattc tgaacaaagg gtttcttgat ggaaaaatgg
    28741 gttggattat gtccgtcaac cacagctatt acacgatgat taaatatgtc aaactatatt
    28801 atctgtacaa atctggcgga aaattttaaa tggaaaaaga attcaggata ttaaatatcg
    28861 tatcggccaa gatttggggt gggggcgaac aatatgtcta tgatgtttca aaagcattgg
    28921 ggcttcgggg ctgcacaatg tttaccgccg tcaataaaaa taatgagttg atgcacagac
    28981 gcttttccga agtttcttcc gttttcacga cacgccttca cacgctcaac gggctgtttt
    29041 cgctctgcgc gcttacccgc tttatccggg aaaaccgcat ttcccacctg atgatacaca
    29101 ccggcaaaat tgccgcctta tccatacttt tgaaaaaact gaccggggtg cgcctgatat
    29161 ttgtcaaaca taatgtcgtc gccaacaaaa ccgattttta ccaccgcctg atacagaaaa
    29221 acacagaccg ctttatttgc gtttcccgtc tggtttacga tgtgcaaacc gccgacaatc
    29281 cctttaaaga aaaataccgg attgttcata acggtatcga taccggccgt ttccctccct
    29341 ctcaagaaaa acccgacagc cgttttttta ccgtcgccta cgccggcagg atcagtccgg
    29401 aaaaaggatt ggaaaacctg attgaagcct gtgtgatact gcatcggaaa tatcctcaaa
    29461 tcaggctcaa attggcaggg gacggacatc cggattatat gtgccgcctg aagcgggacg
    29521 tatctgcttc aggagcagaa ccatttgttt cttttgaagg gtttaccgaa aaacttgctt
    29581 cgttttaccg ccaaagcgat gtcgtggttt tgcccagcct cgtcccggag gcattcggtt
    29641 tgtcattatg cgaggcgatg tactgccgaa cggcggtgat ttccaatact ttgggggcgc
    29701 aaaaggaaat tgtcgaacat catcaatcgg ggattctgct ggataggctt acgcctgaat
    29761 ctttggcgga cgaaatcgaa cgcctcgtct taaaccccga agcaaaaaac gcactggcaa
    29821 cggcagctca tcaatgcgtc gccgcccgtt ttaccatcaa ccataccgcc gacaaattat
    29881 tggatgcaat ataaactgct ttcagacggc atatgccgtc tgaaagcctt tgatgcaaca
    29941 aaccgccaaa ttatattcgt tcattggaaa gaaacacccc gaatccatcc ttaaaaataa
    30001 gaaaatccca atatcccccg atattacgca gcctattggc aaagttttgc agcgtcttcc
    30061 ccggcttgtg ctgccgcatc aagtgctttg ttacaatgta tagtaga
//
LOCUS       DAXHRP010000007        29187 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.007, whole genome shotgun sequence.
ACCESSION   DAXHRP010000007 DAXHRP010000000
VERSION     DAXHRP010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29187
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.007"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            166..789
                     /gene="lolA"
                     /locus_tag="ACFM72_000214"
     CDS             166..789
                     /gene="lolA"
                     /locus_tag="ACFM72_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HFC6256855.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1062..2201
                     /locus_tag="ACFM72_000215"
     CDS             1062..2201
                     /locus_tag="ACFM72_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6256856.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAHPPSAKPEAGQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTQQVKKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLLPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2335..2622
                     /locus_tag="ACFM72_000216"
     CDS             2335..2622
                     /locus_tag="ACFM72_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC6256857.1"
                     /translation="MDLSIVVPIYNVESYLEACLSSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKTTNNKQQTTNNKQQTTNTGHQISNIYIRITKDCQRREIPE"
     gene            2595..3353
                     /locus_tag="ACFM72_000217"
     CDS             2595..3353
                     /locus_tag="ACFM72_000217"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC6256858.1"
                     /translation="MSEARNTGIKNSNGKYIVFIDSDDFINCQVLLDFLSKDDIDMPD
                     VVFLNAVKYDKGSVSYFGEDYQPEKILNQSKVEVLKGLCRFRKFPGSAWNKIIKRELI
                     IKEKLFFEKGIYSEDIEWSMRLFNAATTFFYLDGCYYYYRQGRKDSITGTVSEKSIKS
                     LLYILEKNAEMEFNRDISSYLYSFLSYEYLVLLFIMTSKNIECDADIKRRAYHLRFML
                     LKSNKLIYKLIFPIITLFGVDITGRILKVIRGNV"
     gene            3394..3924
                     /locus_tag="ACFM72_000218"
     CDS             3394..3924
                     /locus_tag="ACFM72_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HFC6256859.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(3958..4074)
                     /locus_tag="ACFM72_000219"
     CDS             complement(3958..4074)
                     /locus_tag="ACFM72_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HFC6256860.1"
                     /translation="MPSEPEKRLSDGIFACNSNADGQNQGASDTVIGCVPSA"
     gene            complement(4299..5894)
                     /locus_tag="ACFM72_000220"
     CDS             complement(4299..5894)
                     /locus_tag="ACFM72_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HFC6256861.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LKIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGRFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLSIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(6001..6396)
                     /gene="hisI"
                     /locus_tag="ACFM72_000221"
     CDS             complement(6001..6396)
                     /gene="hisI"
                     /locus_tag="ACFM72_000221"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HFC6256862.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(6427..7194)
                     /gene="hisF"
                     /locus_tag="ACFM72_000222"
     CDS             complement(6427..7194)
                     /gene="hisF"
                     /locus_tag="ACFM72_000222"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HFC6256863.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAANPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(7207..7944)
                     /gene="hisA"
                     /locus_tag="ACFM72_000223"
     CDS             complement(7207..7944)
                     /gene="hisA"
                     /locus_tag="ACFM72_000223"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HFC6256864.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(7977..8615)
                     /gene="hisH"
                     /locus_tag="ACFM72_000224"
     CDS             complement(7977..8615)
                     /gene="hisH"
                     /locus_tag="ACFM72_000224"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HFC6256865.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(8746..10248)
                     /gene="pta"
                     /locus_tag="ACFM72_000225"
     CDS             complement(8746..10248)
                     /gene="pta"
                     /locus_tag="ACFM72_000225"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HFC6256866.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(10433..11491)
                     /gene="fbpC"
                     /locus_tag="ACFM72_000226"
     CDS             complement(10433..11491)
                     /gene="fbpC"
                     /locus_tag="ACFM72_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HFC6256867.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(11512..13029)
                     /gene="fbpB"
                     /locus_tag="ACFM72_000227"
     CDS             complement(11512..13029)
                     /gene="fbpB"
                     /locus_tag="ACFM72_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HFC6256868.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(13097..14092)
                     /gene="fbpA"
                     /locus_tag="ACFM72_000228"
     CDS             complement(13097..14092)
                     /gene="fbpA"
                     /locus_tag="ACFM72_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HFC6256869.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(14343..14813)
                     /locus_tag="ACFM72_000229"
     CDS             complement(14343..14813)
                     /locus_tag="ACFM72_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HFC6256870.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGSILQFVCNWSFPAAEKTCSVLKKIGAVHSAMLIHRAADALGKEIRHLQS
                     EGKNLKEMWDITQHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(14871..16247)
                     /gene="argH"
                     /locus_tag="ACFM72_000230"
     CDS             complement(14871..16247)
                     /gene="argH"
                     /locus_tag="ACFM72_000230"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HFC6256871.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRCRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(16266..17135)
                     /gene="galU"
                     /locus_tag="ACFM72_000231"
     CDS             complement(16266..17135)
                     /gene="galU"
                     /locus_tag="ACFM72_000231"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFC6256872.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(17163..17762)
                     /gene="rdgB"
                     /locus_tag="ACFM72_000232"
     CDS             complement(17163..17762)
                     /gene="rdgB"
                     /locus_tag="ACFM72_000232"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HFC6256873.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAKYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELVGKADKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNDTPLGQNGFGYD
                     PYFYLPEHGKTAAELDTEVKNRESHRAQALAELLRKLAL"
     gene            complement(17755..17988)
                     /locus_tag="ACFM72_000233"
     CDS             complement(17755..17988)
                     /locus_tag="ACFM72_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HFC6256874.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGALALYLRHKSLHAAQSATKENRYV"
     gene            complement(18096..18629)
                     /locus_tag="ACFM72_000234"
     CDS             complement(18096..18629)
                     /locus_tag="ACFM72_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HFC6256875.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDVE
                     EAKKVIKESIERWNKQA"
     gene            complement(18731..19189)
                     /gene="nudB"
                     /locus_tag="ACFM72_000235"
     CDS             complement(18731..19189)
                     /gene="nudB"
                     /locus_tag="ACFM72_000235"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HFC6256876.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            19400..19476
                     /locus_tag="ACFM72_000236"
     tRNA            19400..19476
                     /locus_tag="ACFM72_000236"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19434..19436,aa:Pro,seq:ggg)
     gene            19634..21460
                     /gene="mafB"
                     /locus_tag="ACFM72_000237"
     CDS             19634..21460
                     /gene="mafB"
                     /locus_tag="ACFM72_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HFC6256877.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            21463..21927
                     /locus_tag="ACFM72_000238"
     CDS             21463..21927
                     /locus_tag="ACFM72_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256878.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            22152..22298
                     /locus_tag="ACFM72_000239"
     CDS             22152..22298
                     /locus_tag="ACFM72_000239"
                     /inference="COORDINATES: protein motif:HMM:NF012755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256879.1"
                     /translation="MWYEANIGLINTMSRSNQAGTRLLYSNYGLLYITTDHYISATRF
                     VAWK"
     gene            22310..22597
                     /locus_tag="ACFM72_000240"
     CDS             22310..22597
                     /locus_tag="ACFM72_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HFC6256880.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            23111..24349
                     /locus_tag="ACFM72_000241"
     CDS             23111..24349
                     /locus_tag="ACFM72_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HFC6256881.1"
                     /translation="MIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEALKKDKQ
                     TARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKESLYYLN
                     KHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGSCAETFG
                     LGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEYVQFSID
                     LFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAH
                     AQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVE
                     IKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSK
                     SGIKIEGFTEPNRTAYPIYE"
     gene            24380..24799
                     /locus_tag="ACFM72_000242"
     CDS             24380..24799
                     /locus_tag="ACFM72_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256882.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            24990..25214
                     /locus_tag="ACFM72_000243"
     CDS             24990..25214
                     /locus_tag="ACFM72_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC6256883.1"
                     /translation="MRLATKDLAEAIRKGQVRKSSFNTEQLRAIEKGESKIPDYTWHH
                     HQDTGRMQLIREGLHHDTGHIGWEAMNKGR"
     gene            25217..25606
                     /locus_tag="ACFM72_000244"
     CDS             25217..25606
                     /locus_tag="ACFM72_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256884.1"
                     /translation="MWKIIKEDSDDLEFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSCRLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKHPEIYQKFQHFFPFVELPPL"
     gene            25633..25824
                     /locus_tag="ACFM72_000245"
     CDS             25633..25824
                     /locus_tag="ACFM72_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC6256885.1"
                     /translation="MRLSDGIFDTKQVTKRAFDGKGEPKIPNYTWHHHQDTGRMQLVP
                     EEKHSPTGHIGGRAMDKGK"
     gene            25961..27145
                     /gene="mafB"
                     /locus_tag="ACFM72_000246"
                     /pseudo
     CDS             25961..27145
                     /gene="mafB"
                     /locus_tag="ACFM72_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
     gene            27156..27617
                     /locus_tag="ACFM72_000247"
     CDS             27156..27617
                     /locus_tag="ACFM72_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256886.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            27604..27891
                     /locus_tag="ACFM72_000248"
                     /pseudo
     CDS             27604..27891
                     /locus_tag="ACFM72_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229180.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
     gene            27918..28337
                     /gene="mafI"
                     /locus_tag="ACFM72_000249"
     CDS             27918..28337
                     /gene="mafI"
                     /locus_tag="ACFM72_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MafI"
                     /protein_id="HFC6256887.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            28427..28498
                     /locus_tag="ACFM72_000250"
                     /pseudo
     CDS             28427..28498
                     /locus_tag="ACFM72_000250"
                     /inference="COORDINATES: protein motif:HMM:NF026862.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            28495..28737
                     /gene="imm31"
                     /locus_tag="ACFM72_000251"
     CDS             28495..28737
                     /gene="imm31"
                     /locus_tag="ACFM72_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HFC6256888.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            28815..29060
                     /locus_tag="ACFM72_000252"
     CDS             28815..29060
                     /locus_tag="ACFM72_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC6256889.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
BASE COUNT         7437 a         6551 c         7976 g         7223 t
ORIGIN      
        1 ggcacacaat taaagggcag cgtggcgcgc cgccttttcc ggtggacaaa aaatcagccc
       61 tcggaaaacg cggtttgcaa aatgcaaacc gcccgtaacg ccgcccatat gattgttttg
      121 ccgcgccgat actttacgcc acactcattc caacaaggaa aaataatgat gaaaccgcac
      181 aacctgttcc aattcctcgc cgtttgctcc ctgaccgtct ccgtcgcttc cgcacaggcg
      241 ggcgcggtgg acgcgctcaa gcaattcaac aacgatgccg acggtatcag cggcagcttc
      301 acccaaaccg tccaaagcaa aaagaaaacc caaaccgcgc acggcacgtt caaaatcctg
      361 cgcccgggcc tcttcaaatg ggaatacact tcgccctaca aacagactat tgtcggcgac
      421 ggtcaaaccg tttggctcta cgatgtcgat ttggcacaag tgaccaagtc gtcccaagac
      481 caggccatag gcggcagccc cgccgccatc ctgtcgaaca aaaccgccct cgaaagcagc
      541 tacacgctga aagaggacgg ttcgtccaac ggcatcgatt atgtgctggc aacgcccaaa
      601 cgcaacaacg ccggctacca atacatccgc atcggcttca aaggcggcaa cctcgccgcc
      661 atgcagttga aagacagctt cggcaaccaa acctccatca gtttcggcgg tttgaatacc
      721 aatccccaac tctcgcgcgg cgcgttcaag tttaccccgc ccaaaggcgt ggacgtgttg
      781 agcaactgat gccgtccgcc ccgatgccgt ctgaaagccg ccgaggcttc agacggcatt
      841 ttcacgcagg cggaacaatg tcccgcatta ccgcccgatc gggcatcgga acggcaaacc
      901 cgtgaaaatt aacggttgcg ccccggttgt ttttgccgtt taatgcaaac cttgctgcac
      961 caagggccaa gaaagccgac cggccgcccc cacagcttcc gatgcaggcg gcccgtccgt
     1021 ccctgcaatg ttttttattt ttgaacgaaa ggtcgaaaac catgaaaaaa acactggtgg
     1081 cggcggcgat cctgagcctc gccttgactg cgtgcggcgg cggaagcgat accgccgccc
     1141 accccccctc cgccaagccc gaagccggac aatcgggcaa actcaatatc tacaactggt
     1201 cggattatgt cgatcccgaa accgtcgccg cctttgaaaa agaaaccggc atcaagacgc
     1261 gttccgatta ttacgacagc aacgaaacac tggaggcaaa agtcctgacc ggcaaatccg
     1321 gctacgacct gaccgcgccg tccatcgcca acgtcggccg gcaaatcaaa gcgggcgcgt
     1381 atcagaaaat cgacaaggcg caaatccccc attacggcaa catcgataaa gatttgctga
     1441 aaatgatgga agccgtcgat ccgggcaacg aatatgccgt gccttatttc tggggaatca
     1501 atactttggc aatcaatacc cagcaggtga aaaaggcatt gggtacggac aagctacccg
     1561 aaaacgagtg ggatttggtg ttcaaacccg aatacaccgc caaactcaaa tcctgcggca
     1621 tcagctattt cgacagcgca atcgaacaga ttcccttggc gttgcactat ttgggcaaag
     1681 accccaacag tgaaaatcct gaagacatca aagccgccgt cgatatgatg aaagccgtcc
     1741 gaggcgacgt gaaacgcttc agctcttccg gctatatcga cgatatggcg gcgggcaacc
     1801 tgtgtgccgc catcggttac ggcggcgatt tgaacattgc caaaacccgt gccgaagaag
     1861 ccgcaaacgg cgtggaaatc aaagtattga ccccgaaaac cggcgtgggc gtgtgggtgg
     1921 attcctttat gattccgcgc gacgcgcaaa acgttgccaa cgcccaccgc tatatcgact
     1981 acacgctcct gcccgaggtg gcggcgaaaa acggcagctt cgttacctac gcacccgcca
     2041 gccgccccgc gcgcgagctg atggatgaaa aatacacctc cgacgcatcg attttcccga
     2101 acaaagaact gatggaaaaa agtttcatcg tatcgcccaa atccgcagaa tccgccaaac
     2161 tgggcgtgaa gctgtggcaa gggctcaagg ccggaaaata accgcaacct ctgccgtctg
     2221 aaacctttcg ggcggcagga aacggcgcgt ccgttatcaa acaggggggg cgtttcccct
     2281 cctgccggtt atgattgggt taagattaaa atgatttagt aaaatgagaa agatatggat
     2341 ttaagtatcg tagttcccat ttataatgtc gaaagttatt tggaagcgtg tttaagttcc
     2401 atagaaccta tattaagtaa tgaaaatgtc gaacttatcc ttgtgaatga cgggtcaaaa
     2461 gacggaagtg aagatatatg ttataaatat atagataaaa caacaaacaa caaacaacaa
     2521 acaacaaaca acaaacaaca aacaacaaac accggacacc aaatatcaaa tatatatatc
     2581 aggataacca aggattgtca gaggcgagaa ataccggaat aaaaaattca aacggaaaat
     2641 atatagtctt tattgattcg gatgatttta ttaattgtca ggtcttgctg gattttctta
     2701 gtaaagatga tattgatatg ccggatgtgg tttttttaaa tgcggttaaa tatgataagg
     2761 gaagtgtttc atattttggc gaagattatc agcctgaaaa aatactcaat caatccaaag
     2821 tcgaagtttt gaaaggatta tgccgattta gaaaatttcc gggttcggcg tggaataaga
     2881 ttataaaaag agaattgatc atcaaagaaa aactattttt tgaaaagggg atttattctg
     2941 aagatatcga atggtcaatg aggttattta atgcggcaac aacttttttt tatttggacg
     3001 gttgttatta ctattatcgg cagggaagaa aagattctat tacgggaact gtttcggaaa
     3061 aaagtataaa gtcattatta tatattttgg agaaaaatgc ggaaatggaa tttaataggg
     3121 atatatcaag ttatctttat tcctttcttt cctacgaata tctcgttttg ctttttatca
     3181 tgacgagtaa aaatatagag tgtgatgctg atataaaaag aagggcgtat catttaaggt
     3241 ttatgctgtt aaagtccaat aaattgatat ataagctgat attcccgata atcacattat
     3301 tcggggtcga tattacaggc aggattttaa aagtaatcag agggaatgtt taataaatcc
     3361 tttaacacta tacatcttac cgaaggagga aaaatgaacg caatccgaac tttccaaaac
     3421 cgcacgcccg aaatccacga aagctgtatg atagacgaag cgtgcgtcgt catcggcgaa
     3481 gtgtcgcttg ccgaagacgt ttctgtgtgg ccgtgcgccg tgttgcgcgg cgatgtgaac
     3541 agcatcaccg tcggcgcgcg cagcaatata caggacggca gcgtcctgca cgtttcccac
     3601 aaaaccgccg ccaaacccga agggtcgccg ctggttatcg gcgaagacgt taccgtgggg
     3661 cacaaagtga tgctgcacgg ctgccgtatc ggcaaccgcg tcctggtcgg catggggacg
     3721 acggttctgg acgatgccgt gattgaggac gaagtgatga tcggcgcggg cagcctcgtg
     3781 cctccgcgca aacgtttggc gggcggctat ctttatgtcg gttcgccggt cagacaagtg
     3841 cgcgtgttga ccgatgagga aaaagccttt ttgaagtatt ccgccgcgca ttatgtgaag
     3901 ctgtcgaaac agtacgggat gtgaaatcac atcggcgttc ttgcgtcagc cccaaattca
     3961 tgcggatggg acgcatccga taacggtatc cgatgcgcct tgattttgac cgtctgcgtt
     4021 tgagttgcag gcaaaaatgc cgtctgaaag ccttttttcg ggttcagacg gcattttatc
     4081 gccgattgct ttttacagtt tgaccgaatg ttcgcgcgtt tcgtggaaca cgatgtccgg
     4141 ccaacgttct tgcgtcagcc ctaaattcat gcggacggga tgcccgataa cggtatccga
     4201 tgcgccttga ttttgatcgg tgcatttgag ttgcaggcaa aaatgccgtc tgaagccctt
     4261 ttttcgggtt cagacggcat tttattgccg attgcttttt aaagtttgac cgaatgctcg
     4321 cgcgtttcgt ggaacacgat gtccggccaa cgttcttgcg tgagtcccaa attcacgcgg
     4381 ttgggggcga ggtaggcgag gttgccgcct gcgtctatcg acagattgcc tgcattggct
     4441 ttttcaaatt ccgccagttt tttcttgtcg tcgcacgata cccagcgcgc cgaccagatg
     4501 gatgcgctgt cgaacacggc ttctacaccg tattcgttgg cgagccgcga ggttacgact
     4561 tcaaactgca acacgccgac cgcgcccaaa atcaaatccg cgccgctcat cggtttgaac
     4621 acctgtaccg cgccttcttc gccaagctgt tgcaaacctt tttgcagttg cttgattttc
     4681 agtgggtttt tgatgcggac gctgcggaac agttcgggcg cgaagaaggg aatgcctgta
     4741 aatgccagtt gttcgccttc ggagaagctg tcgccgattt ggatgttgcc gtggttcggg
     4801 atgccgatga tgtcgccggc gtaggcttct tccaccagct cgcggtcgtg cgacatgaag
     4861 gttaccacgc tggaggcggc gatttcgcgg ttgatgcgaa ggtgtttcat cttcataccg
     4921 cgctcgaatc tgccggagca gacgcgcagg aaggcgatgc ggtcgcggtg tttcggatcc
     4981 atattggctt ggattttaaa gataaatccg gagaatttcg gctcgtccgg ctcgaccata
     5041 cgtacggtcg cgtcgcgcgg tttcggcgcg ggcgcccagt caatcaatga attgaggatt
     5101 tcctgaatac cgaagttgtt aatcgcagag ccgaagaata cgggcgtgag ttcgccggcg
     5161 aggaattcgt cgagattgaa ctcgttggaa gccgcctgca ccaattcgat ttcgtcgcgc
     5221 aactgttgga tttccaatgg aaagcgttgt tccaattcag gattatcgat acctttgatg
     5281 atgtcgaatt cgtgcggcag gcgttcgccg cccgcttcaa agagatagat ttcgtcgttc
     5341 aggatgtggt acacgccttt gaagtttttg cccataccga ttggccaggt aacgggcgcg
     5401 cagcggattt ttaaaatgtt ttccacttcg tctaaaagtt ccagggaatc gcgcacttcg
     5461 cggtcgtatt tgttcatgaa cgtaacaatc ggcgtatcgc gcaggcggca gacgttcaag
     5521 agtttgatgg tttgcgcttc cacgcctttt gccgcgtcga tgaccatcaa cgcgctgtcc
     5581 acggcggtca aaacgcggta ggtgtcttct gagaaatctt ggtgtcccgg cgtgtccaag
     5641 aggttgacgg tgtggtcttt atagtcgaac tgcatcacgc ttgatgccac ggaaatgccg
     5701 cgctgcttct cgatgtccat ccagtcggaa gtggcgaatt tgccggtttt tttgcctttt
     5761 accgtacccg cgctttgaat cgcacctgaa aacagcaaga gtttttcagt caacgtggtt
     5821 ttacctgcgt cagggtggga gatgatggca aacgtgcggc ggcggcgcac ttggtcgagg
     5881 atttcttggg acatggtttt ctttgcaaaa aggttcaggc cgcttttcag acggcccgga
     5941 cagtgtttga gacggcgaaa ttgtacaaaa aaatgcctga taattcaatg ttggaggcgg
     6001 tcagtgcgtg ctgccgtaaa tctctttttc gtctttcagg acggcatcgg cggtttccca
     6061 cgcgccgccg cgccagactt tgtaaaagca gctttcgcgc ccggtgtggc aggcgatgcc
     6121 gccgttttgg gcgatgagca tcacaatggc gtcgccgtcg cagtcgaggc gcagttcgcg
     6181 gactttttgc gtgtgtcccg actcttcgcc cttcatccat tgtttttggc gcgaacggct
     6241 gtaatagtgg gcaaagccgg tttcgacggt tttttgcagg gcttcggcgt tcatccacgc
     6301 caccattaaa acacgtttgg tttcggcatc ttgggcgatg gcgcaaacca aacctttttc
     6361 gtcaaatttg acggcttcaa gcaggttttt atccatattt cctttcagac ggcatagtcg
     6421 gggcggtcag aggcgcactt cgatgccggc ttcgcgcata gcgcgtttgg cttcgcggat
     6481 ggcgatttcc ccgaaatgga aaatgccggc ggcaagtacg gcatcggctt tgccttcggt
     6541 tatgccttca atcaggtgcc ggacattgcc gaccccgccg gaggcgatga cggggatgtc
     6601 gacggcttcg gcaacggcgc gggtcagcgg caggttgaaa ccctgtttcg taccgtccct
     6661 gtccataccg gtaagcagga tttcgcccgc gccgcgtttt tgcatttcga ccgcccattc
     6721 caccgcatcc aaaccggtcg gatttcgccc gccgtgggta aagatttccc agcgtgtgtt
     6781 ttcggggttg gcggctttgg catcgacggc ggcgacgatg gcttgcgaac cgaaaaatcc
     6841 ggcggcttcg tcaattaaat cgggacgggt aacggcggcg gtgttgatgc tgactttgtc
     6901 cgcgccggca ttgagcaggc ggcggatgtc ggcaacggtg cgtacgccgc cgccgacggt
     6961 cagggggatg aagacttgtc cggcaacttc ttcgatgatg tgcaggatgg tgtcgcggtt
     7021 gtcggatgag gcggtgatgt cgaggaaggt caattcgtcc gcgccttcgc cgttgtagcg
     7081 tttggcggct tcgacggggt cgcccgcgtc gcgcaaaccg atgaagttca cgcctttgac
     7141 gacgcgcccg tcttttacgt cgagacaggg gatgatgcgt tttgccagtg ccataatcgg
     7201 atgcctttag tcgagggaat ctgccagttg ctgcgcttgg gcaaaatcga tgctgccctc
     7261 gtaaatcgcg cggccggtaa tcgcgcctgc tacgccatgt ttttcggcgg cacacagggc
     7321 gcggatgtcg tccaagccgg tcagtccgcc ggaggcgatg acgggaatgc ggacggcttg
     7381 ggcgagtttg accgtcgcgt cgatgttcac gccgctcatc ataccgtcgc gcccgatgtc
     7441 ggtgtagatg atgctgttga cgccgtcgtc ttcaaagcgt tttgccaaat caattacatg
     7501 atgcccggtt acggttgccc agccgtcgat ggcggccata ccgtctttgg catccagccc
     7561 gacaataatc ctgccgggga aggctttgca cgcctcgcgc acgaagtcgg ggtttttgac
     7621 cgccgccgtg ccgataatca cgtcgttcag acccaaatcc aaatattgtc cgatggtttt
     7681 caaatcgcgt atgccgccgc cgagctgtac ggggatgtct ttggcgacgg cggcaaggat
     7741 gtctttgatg gcgggcaggt tttgcggaac gccggcaaac gcgccgttca aatctaccag
     7801 atgcaggcgg cgcgcgcctt gtttgaacca gtgcagtgcg gtttcggcgg gcgaatcgga
     7861 aaagacggtc gcctcttcca tcagcccttg tctcaggcgg acgcagcgtc cttctttcaa
     7921 atcgatggcg ggtatcagca gcataatttt tctccttgtg cggggccgtg tccggcttac
     7981 cagtttaaaa agtttttcaa catcgtcagc ccggcatcgt ggcttttttc ggtgtgaaat
     8041 tgcgtggcga atacgttgtc tttgccgacg atgcaggcaa acggggacgg gtagtcgctt
     8101 tcgcccaata tggtttcggg attttcgggg gcgaaatagt agctgtggac gaagtaaaaa
     8161 cgcgtgtctt ggggaatatc tttaaacagc gggtggtttt gggtttggcg cacggtgttc
     8221 cagcccatat gcgggacttt cagacggcat ccctgcgggt cgcggaggtc gcgctcaaag
     8281 cgtctgactt tgccgccgaa ccagcccaag ccgtcggtgt ttccttcttc actgtggtcg
     8341 aataaaagtt gcgcgccgac gcagattccg aaaaagggtt tgttttttaa ggcatctttg
     8401 actgcctcgt ccaggccgcc gcgcgtcagt gccgccatac agtcgggcat cgcgccctgc
     8461 ccgggaaaaa tgactttgtc ggcgcgggac acgcgttcgg ggtcgccgct taaaaagatt
     8521 tcggtatttt ttccggcaag ctgccccgcc gtccggacgg atttcaatac ggaatgcagg
     8581 ttgcccatac cgtaatcgat aatggcgatt tgcatggctt cctcctcttt ttttgcaata
     8641 tggctgcgat tttaacaaac aaatgtgccg tgctgataaa aatgccgtct gaaaacggga
     8701 gtctgtcttc agacggcata gggtttaaac ccggaaagcc gtttgtcagc cttccatttg
     8761 ttttgcctga acggcagtca gggcgatggt gaacacgatg tcttccacca gcgcgccgcg
     8821 ggagaggtcg ttgaccggtt tgcgcaggcc ttgcagcagc gggccgacgc ttaagacgtt
     8881 ggcactgcgt tggacggctt tataggtgca gttgccggtg ttcaggtcgg ggaagaccaa
     8941 aacggttgcc tgtcctgcca ccgggctgcc cggagctttg gatttgccca cacccggcac
     9001 ggttgccgca tcatattgca gcgggccgtc gatggcgagg tcggggcgtt tttcccgggc
     9061 aagtttggtt gcttcgatga cggtatcgac atcggggccg ctgccggagt tgacggtgga
     9121 gtaggaaatc atcgccactt tcgggtcgat gccgaaggct tttgcggaat cggcagactg
     9181 gatggcgatg tcggcaagct gttgcgcggt cgggttcgga ttaaccgcgc agtcgccgaa
     9241 gacgaggact tggttgggca gcagcataaa gaatacgctg gacacgaggc ttgcgcccgg
     9301 tgcggtttta atcagttgca aagcggggcg gatggtgttg gcggtggtgt gaaccgcacc
     9361 ggataccaaa ccgtccacat cattttgcgc catcatcatc gtaccgagta ccacggtgtc
     9421 ttgcagttgc ttgcgcgcgt cttcgggtgt caggcctttg gatttgcgca gttcgcacat
     9481 cggctcgacg tattgttcga ccaatgaggc gggatcgatg atttccaaag agtcgggcag
     9541 gctgatgccg cgttctttgg caacggcttc gacttcttcg cgtttggcaa gcaggacgca
     9601 gcgggcaatg cctttttcgt ggcagatggc ggcggcttgg acggtgcggg gttctgcgcc
     9661 ctcaggcagg acgatgcgtt tgtcggcttg gcgggcgaag tcgatcaggt tgtagcggaa
     9721 ttgcgccggc gacaggcgtt ttgcttcgcg gcctgccaat acggatacgt ctttcagcgc
     9781 gtcgctcgaa ccgaagaagg tcaggccggt tttttcggct gccgcttcgg caacggaggc
     9841 tgccgcgccg tccacgacaa aaccttccaa tacgcccggc gcggcggcga agaactgttt
     9901 ggcaaggttc agccgatttg ccagttcgtc ggcatcggcg ttgtcggaac ggacggcgaa
     9961 gacggctgcc gcgtcaaggg acaatgccag ttcgacgttt ttgcctgcga ggtagatttt
    10021 gtcggcatcg ggcgcgatgc cttcgatgac gaggttggcg gcatcgagtg cggcaacttt
    10081 gccgaccagt gcgtcgaacc agtcgtcgct tttgccttgc gcgagcaggg tttcggcggt
    10141 tgcgtcaacg gcttggaaaa tttgtgcgtc cagtgctttt gcaaaggctt gtgcggcggc
    10201 ggaggcgtcc agtccggcag atacgggtac gatgagtact tttgccatga tatatccttt
    10261 cgtatgctgc ggtgtgcggc atatgtggtt ggaaggggcg gcatataggc agaaacggct
    10321 gcctgcgtgc cgtgcgtgcc gtgtttggct tgaggcgcgc aggttgaata tagcaaacaa
    10381 attctgtttc caacaagata aatatccgca ggcttgtgga tgctgccgcc tttcagaggg
    10441 tatttccggg gaagaacagg gcgggaccgt ccaaatggag gacggcggaa atgccgtctg
    10501 acagggtggg ggcggaaggg aggttgagcg tgaggacggt ttgtccgacc cggagactga
    10561 tttcggtatg ccgcgctttg ggcgtggttt tgagaaccac ggcgtgaatg gaggcggtgg
    10621 gtgcggaatg ggggtgaagg ctgaactgtt ccggacggat gagcagtgtg ccgcgtgtgc
    10681 ctgcgggtgc gccgctttga acgggcaggc ggcccaatcc gcaatcggcg gtgccgtcgg
    10741 cgttgagcgc ggcggggaac acgatgcctt cgccgataaa cagggcggca tcaaggtcgg
    10801 caggttgtcg gtacaattcg tgagggcttg cagtttggag gatgcgcccc tgtttcatca
    10861 cggcaatccg gtcggcgtat tgcagggctt cttcgcggtc gtggctgacg aaaacggcag
    10921 atttgccgtt ggcgcgcagg gcggcaatca tgtcttcgcg aatctggcgg cgcaactgtt
    10981 cgtccagcgc gctgaagggt tcgtccaaca aaatcagttc gggatcgggt gcgagggcgc
    11041 gggcgagggc gacgcgctgt tgctgtccgc ccgaaagttc gtgcggatag cgtccggcaa
    11101 gttcggaaat gccggtcaat tccaacatag cttcgatgcg ctgccgctct tgcgccgtct
    11161 tgcctttgcc gttgcccagc ccgtaggcgg tgttgcggta aacggtcagg tgggggaaca
    11221 gtacgccttc ctgtacgaca taacccaaac ggcgttcgcg gacggggagg ttggtatttt
    11281 tcgagaagat ggttctgccg gaaagcgaaa tttcgccaaa atcgggttgt tcaaaaccgg
    11341 caaggcagcg taaaagggtg gttttgccgc agccggacgc gccgacgata aagaggattt
    11401 cgcccgggtc gaggctgagc gaaatgtcgt ttaaaaccgg ggtgttttga aaacttttgg
    11461 acaggtgtcc gatgtgcagg gcggcggtca tggcggtact tcctcaagct gttatttgaa
    11521 ggcgtatttc ttcagcagga atacggggat gccggaaaat aataccagca tcagcgcgta
    11581 aggggtggcg gcggcgtatt gtgcgtccga tgtgtattcc caaacggcgg tggagagtgt
    11641 gtggacatcg tcggtggtca gcagcagggt ggcggtcagc tctttcatca gtttgaggaa
    11701 gacgagtgcg aatgcggcgg taatgccggg caggatggac ggcagtacca acgtcctgaa
    11761 aataaagaag tgtccgcgcc ccaatgttgc gccgacctgt tccatccctt tggggagttg
    11821 ttccaaggaa gtcctcaggg tggtttgcgc catcggcagg taaagcatga aataggcaag
    11881 gatgacgacg ataaaggttt ggtaaacggc aggggtgtag ttgatgctga aataaaccaa
    11941 ggatagggcg ataaccaaac cggggacggc gtgcagtaaa aacggcagcc tgtctatcca
    12001 aacggttaaa aaattgcgat agcgaaccga tgcccaaaca aggggcaagg cacataatat
    12061 agtcaaaatc gcacctaaag ccgatacgct taaggaacgg ataaaggcat caaatacgga
    12121 tacgagcgcg aatgtgccgg aagtgccgac catcatccaa tgtatcaata cgccaaaggg
    12181 gataataatg cccaaagtca acaagctgct taaaaaaaca atcgcgccaa tctgaccggg
    12241 cagtttgagg gttttgacgg gataaggacg ggcaacgcct ttgccgctgt ggtaaatctt
    12301 ggctttgccg cgaaatatgc tttctccaaa tacgacgatg ccgcacaccg ccattaaaac
    12361 agcggaaagc agggcggcgg tattgttgtt gtaggacatt tcgtattctt ggaaaatggc
    12421 ggtggtaaaa gtggggtagt tcaaaataga taccgcgcca aattcgacca gcatatgcag
    12481 ggcaatcagt aacacgctgc tgccgatggc gggtttgagc tgggggagga tggcggaaaa
    12541 aaaggtttgc aggcggcttt tgcccaagga caggctgact tcttcgtaag acaggctgat
    12601 gcgtttgagt gccgcctcga cgggcaggta ggcgagcggg aacgaggaca ggctcataat
    12661 catcactgtc ccccaaaagc cttcgacacg gaaggtcagg ctgatccagg tgaaacagct
    12721 gacaaatgcg gggatgcaca aaggcagggt gattgccgtc tgaaaaaagg ttttgccgaa
    12781 gaagcggtaa cgttggaaca aaagggcgca ggcaatgccc aaaacaatgg aaatcagggt
    12841 aacgcccgcc atcatcgtca aggtgttgga gagcaaatcc cacatacgcg ggcggaacaa
    12901 cagttcgacg gcgcggttga tgccgacctg ccacgaacgc atagcgacat ataaaaaagg
    12961 cagggtaagc ggtagggcaa tcagtaggat gaggccggta agccaaatgg gtattttttt
    13021 aggagacata gtgtttttta tcggcaaaac gggcggacag tataaatgtc cacccgtttg
    13081 acaatccgaa aacggcttat ttcataccgg cttgctcaag cagccgggtg gcgtgttctt
    13141 tttcggaaac agtggtggcg gacacttggg gtgcttccaa cttggcgatg ggttccaaat
    13201 tgaaagtgga taccacgtgc ggattcaaag gatattcggc acggacggcg gtcagggcgc
    13261 gctgtccttc cttgctggcg aggaaggcga cgaatttttt cgcctcatcc ttgttttggg
    13321 aggattttaa cacggctgcg ccggaatagg taacgagtgc gccgggatct ctgtggcgga
    13381 cgaaattcag gcgggtgtgg acattttgta cgcctttttc acgcgcaaaa gcgtgccagt
    13441 agtagttgtt gatgagggcg gcatcgattt cgccgttttc aaccgcttga agggcgacgg
    13501 agtttttagc gtaaggcttg ccgtattctt tcagaccttt gagccatttc aatgcggccg
    13561 cttcgccttt cagtttgacg atggcgacaa cctgttccaa gaacgcgccg gaagtggggg
    13621 cgtaaccgat gcggtttttc catttcggcg tggcgtaatt caggacggat ttttccaaat
    13681 ctttttcaga cagtttgcgg gtgtcgtaaa cgacgacgcg cgaacgtccg ctcagtgcca
    13741 cccagtcttt tttggcggca accggcacgc ccttgccgcg tgtttcgttg atggtggagg
    13801 cgggcagggg ctctaggagg ttggctgcgg aaagggtggc gagtgccggg atttgttcgg
    13861 aatagaatac gtcggcgggg cttcggctgc cttcttcttt gatttgaccg gcaagctggt
    13921 cgcctttggc gctgttgagt ttgactttga tgccggtagc ccgggtaaag gcatctgcaa
    13981 cggcttgtgc cgcttctttg tgttggccgt tgtacacggt aatgtctgcc agcgcggggg
    14041 ttgcggcggt cagggctgcg gcaagcagtg cgtatcggat agatgttttc atatcgattt
    14101 tctcctaatg aatgagagtg tacaccttgt taagacataa cggcgtgtag tgtattcctt
    14161 cttctttata aatgcaaata attatttttt aaatttgtta ttatccgatc cggttatggt
    14221 ttgttctgac ttgtattttt tccgtgcatc gcgcccgtaa ggcggaagcg gcgggcaatg
    14281 cgtggcggaa tgtgggtaaa ggcggcattt tgatttgtcg gaatgcttga gaacccctct
    14341 ctttaaaaca gcgtctgaac agggttgccg gaatagtatt gccatcccgg cagatacagt
    14401 ttgtcggggt cttgccaata ttgttcatcc agactgttcg gcagtgaggc ggttttgttg
    14461 tcgagatgtt gcgttatatc ccacatttct ttcaggtttt taccttccga ttggaggtgg
    14521 cggatttctt ttcccaatgc gtctgccgcc cgatggatca gcattgcgct gtgtaccgcg
    14581 ccgatttttt tcagaacgga acaagtcttt tcggcggcgg ggaaactcca gttgcagaca
    14641 aattgcagta tgctgccgtt accgatatcg gcttctgtcc gccaaatcaa aaccagctcc
    14701 tgttcccgcc cgtccatgct ttcgagtttg ccgtcatgct gttcaaaaag tttgtccacc
    14761 gcctgccaca tcatctgttc gaagcggtcg gcttgggtat ccgtatcggt catcgtgttc
    14821 ttgcctttta aaaatgccgt ctgaacattt cttcagacgg catttggggg ttaagccaac
    14881 atttcccgcc agcgtttcac ttggaagcgg acttgttccg gcgcggtacc gcccaagtgg
    14941 ttgcgggcgt ttaagctgcc ttcgggtgtc agcacgccgt aaacgtcgtc ggcaatcaaa
    15001 tcgctgaaac cttgtaagac ttcgagcggc agttcgctca aatcgacgcc cgcttggtcg
    15061 gcgtggcgca cggcttgggc gacgacttcg tgggcatcgc ggaaaggcat gccttttttg
    15121 accagataat ccgccaagtc ggtggcggta gcgaagccct gcatcacggc ggcgcgcata
    15181 ttgtcgggtt tgacggttac gccgcgcatc atatcggcgt aaatccgcaa cgtgtcgata
    15241 agcgtgtcgg cggtgtcgaa caagggttct ttgtcttcct gattgtcttt gttgtacgcc
    15301 aagggttggg atttcatcag ggtaatcaga ccgataaggt gtccgatgac gcggccggat
    15361 ttgccgcgca cgagttcggg cacgtcgggg tttttcttct gcggcatgat ggacgaacct
    15421 gtgcagaaac ggtcggcgat gtcgataaag ccgaaacgcg ggctcatcca caaaatcaat
    15481 tcttcagaca ggcggctcag gtgaaccata accagcgagg cggcggctgt gaactcaatg
    15541 gcgaaatcgc ggtcggatac ggcatcgagc gagttctggc agatttgttc aaagcccaat
    15601 agctcggcgg tgatttcgcg ctgaatcggg taggtcgtcc cggcaagggc ggctgcgccg
    15661 agcggcatac ggttgacgcg gcagcggcag tccgccatcc gttcgttatc gcgtccgagc
    15721 atttcgacgt aggcgagcat atggtgtccg aagctgacgg gctgggcgac ttgcaggtgg
    15781 gtaaagcctg gcatgacggt ttcggcgttt tgttccgcca aatccagcaa tgccgtctga
    15841 aggctttgaa tcaggctttg tataacggta atctggtcgc gcagccacag gcggatgtcg
    15901 gtggcgactt ggtcgttgcg gctgcggccg gtgtgcaggc gtttgcccgc gtcgccgatt
    15961 ttgtcggtca ggcggcgttc gatgttcata tggacatctt ccaaatcgga cgaccattcg
    16021 attttgccgc tgcggatttc ttcgaggatt tccgccatac cccggcggat gtccgccaaa
    16081 tcgccttcgt ccaacacgcc ggtttctttc agcatttgcg cgtgtgccag cgagccttgg
    16141 atgtcccatt cggcaagccg tcggtcgaaa ccgatggagg cggtgtattg tttgacgagt
    16201 tcggaaacgg gttcgttgaa acgtccggac caggttttgt cgtgcataag gattccttga
    16261 tggggttatt cggtgcggta tttttccaaa agccggcgga agggttcgcc ggtttcggga
    16321 tgtttcagac cgtaggcgac ggtggcttcg aggtagccca gtttgctgcc gcagtcgtag
    16381 cgcgtacctt caaaggggtg cgccaggaca aattcgtgat cgagcagctt ggcgatgccg
    16441 tctgtaagct ggatttcgtt gcccgcgccg cgcggaagat tggttaagag gtcgaaaatg
    16501 cgcggggtga ggatgtagcg tccaacaacg gcaaggttgg agggcgcgtc ttcgggcttg
    16561 ggtttttcga caatgccggt aatgcgttgg aactgtttga gctgttcggt ttcgacgatg
    16621 ccgtatgagc cggtttgcga tgcttcaacg gtttctacgc ccaaaatgct gttgccgctg
    16681 cgcccgtaca cttcgaccat ttgtttgagc gcgcctttgg gggcatcaat caggtcgtcg
    16741 gcaaggataa cggcaaaggg ttcgtctccg atggcggcgc gggcgcacaa gacggcgtgt
    16801 cccaagccca gtgcttccgc ctgacggatg tagaggcagg taatgttcgg cggcaggatg
    16861 ttgcggacgt gttccaacaa tttgtcttta tggcgcattt ccaactcggt ttcgagttcg
    16921 tatgccttgt cgaaatggtc ttcgatgctg cgtttgttgc gtccggtaac aaacaccatt
    16981 tccgtgcagc cggcttccac ggcttcttct acggcgtatt ggatcagcgg cttgtcgacg
    17041 atgggcagca tttctttcgg gctggccttg gtggcgggca ggaagcgggt tcccatccct
    17101 gcgacgggga aaacggcttt ccgtatgggt ttcattcttt ttcctttgta ttgttttgat
    17161 gtttaaaggg cgagtttgcg taagagttcg gcaagtgcct gcgcgcggtg gctttcgcgg
    17221 tttttgacct ccgtatccaa ttcggcggcg gttttgccgt gttcgggcag ataaaaatac
    17281 gggtcgtaac cgaaaccgtt ttgcccgagc ggcgtgtcgt tccactgccc gtgccatacg
    17341 ccctcggcga taatcgggcg cgggtcgtct ttatggcgga caaaaaccaa tacgcagaca
    17401 tagcagcagc ttttgtctgc cttgccgaca agttcggcgg caagtttcag gttgttggcg
    17461 gtatcggatt tgggattgtc gcccgcgtaa cgtgcggaat ggatgcccgg cgcgccgttt
    17521 aaggcggcgg cacagatgcc gctgtcgtcg gcgagtgcgg gcagcccgct gtatttggcg
    17581 gcatggcgtg cttttgccag cgcgttttcg acaaaggtgg gatagggttc ggggcattcg
    17641 ggtatgccga atgcggattg cggcaatacg gtgatgctgt aaggtttgaa taagttgccg
    17701 aactcttcga gcttgccggc attgccgctt gccaaaacga ttttttccgg tttttcagac
    17761 atagcggttt tcctttgtgg cggattgggc ggcgtgtagg gatttgtgcc gcaaatagag
    17821 ggcgagtgcg ccgatttgcc cgaacagcgc gccgaatgcg aaaagaaagg aggcgacggc
    17881 gaaggctttg ctgccgacgg tcagcagata agcacccaag aggacgagca gcataaatgc
    17941 cagtgtgaac agggcaacag acaacagata gatttttcgg cggttcatgg cgttcggtcg
    18001 gaaacggtat gttcggatta tatccgattg ggacggcatt ccctagagct tggaaaaatg
    18061 ccgtctgaag gggcgttcag acggcatggc gggcgttatg cctgtttgtt ccagcgttcg
    18121 atggattctt tgatgacttt tttcgcttct tccacatcgc cccaggattc gactttggtc
    18181 gtacctgctt ttttcaggtc tttgtaatgg ttgaagtgga actcgatttg tttgatgagc
    18241 tgttgcggca aatcggacaa agttttgtag gcgttgccgt tgttgcggtc gtcggcagga
    18301 acgcagacga ttttgtcgtc cacttcgccg tcgtcaacga atttcatcac gccgataacg
    18361 cgcgcttcca agaatacgcc ggttgccaga ggctgttcgg taacgagcag cacgtccaat
    18421 tcgtcgccgt cttcgtccaa agtttgggga atgaagccgt agttggtcgg tttggcgaag
    18481 atggcgggtt cgacgcggtc gagttggaat gcggcgagtt tgcggttcca ctcgattttg
    18541 tggttgctgc cggcggggat ttcgttgacg acgttgatga tgccgccgtc cacatcgccg
    18601 ggggtcagga tttggttgaa gtctgccatt tggtttcctt tgtttgggaa agtttgaagt
    18661 ttgaaagtat agcacaaacg tccggctgaa aatgcgcccg atgccgtctg aaagggtgta
    18721 cgggcgcgtg ttaccgtttg cccaaaaacc tgcccagttc caaaattgcg cgcctgttgg
    18781 acggggaaaa cactttttcc gccgcttctt ccaagccgaa ccagccgtag gagacgtgtt
    18841 cctcgggttg caggacgacg ggcgtatcgc gcgggatttc ggcagagaag aggtgttcgc
    18901 ggttttcaaa cacgcctttt ggatagcggt gccgccagtg gtggtagatt tcgtaaaccg
    18961 tgctgtcgtg ccagtcttga agctgcccgt ccgccagcag gatgccggtt tcttcccaaa
    19021 cttcgcgcct tgccgtttgg gcgacggttt cgcctggttc gaggctgccg gttaccgact
    19081 gccaaaatcc tttcggatgc gtgcgttcga tgagcaggat gccgccgtcc ccgctataaa
    19141 ggacgaccag tgcggagacg gggtatttga gcggttttgc catcggcatc tttcggcggg
    19201 ctgcggtaat gaaggggcgg attatagcaa acgccgcacg ttatggcgtt tatccttttc
    19261 cgtatccttt tttctgcacg gatgggacgc gccggtgttt gccggtaaat tttccgttgt
    19321 gtcaaaaaga taagggcggt tgtgatttta atgcttgcca aagcgtcggg cggaaactat
    19381 aatccgaaac ttatcgagtc ggagtgtggc gcagtctggt agcgcacttg catggggtgc
    19441 aaggggtcga aggttcgaat cctttcactc cgaccaaaaa ttccgaaagc cgctttcaaa
    19501 agcggctttt ttgccgtccg tatgattatg atgtagagta cgcggcgaca gacattcaaa
    19561 tgccgtctga aaaccgttca gatggcatct ctttatctta gtttcattcc gtaccatctt
    19621 aaggaacatc aaattgggca tttcccgcaa aatatccctt attctgtcca tactggcagt
    19681 gtgcctgccg atgcatgcac acgcctcaga tttggcaaac gattctttta tccggcaggt
    19741 tctcgaccgt cagcatttcg aacccgacgg gaaataccac ctattcggca gcagggggga
    19801 acttgccgag cgcagcggcc atatcggatt gggaaacata caaagccatc agttgggcaa
    19861 cctgatgatt caacaggcgg ccattaaagg aaatatcggc tacattgtcc gcttttccga
    19921 tcacgggcac gaagtccatt cccccttcga caaccatgcc tcacattccg attctgatga
    19981 agccggtagt cccgttgacg gatttagcct ttaccgcatc cattgggacg gatacgaaca
    20041 ccatcccgcc gacggctatg acgggccaca gggcggcggc tatcccgctc ccaaaggcgc
    20101 gagggatata tacagctacg acataaaagg cgttgcccaa aatatccgcc tcaacctgac
    20161 cgacaaccgc agcaccggac aacggcttgc cgaccgtttc cacaatgccg gtagtatgct
    20221 gacgcaagga gtaggcgacg gattcaaacg cgccacccga tacagccccg agctggacag
    20281 atcgggcaat gccgccgaag ccttcaacgg cactgcagat atcgttaaaa acatcatcgg
    20341 cgcggcagga gaaattgtcg gcgcaggcga tgccgtgcag ggcataagcg aaggctcaaa
    20401 cattgctgtc atgcacggct tgggtctgct ttccaccgaa aacaagatgg cgcgcatcaa
    20461 cgatttggca gatatggcgc aactcaaaga ctatgccgca gcagccatcc gcgattgggc
    20521 agtccaaaac cccaatgccg cacaaggcat agaagccgtc agcaatatct ttatggcagc
    20581 catccccatc aaagggattg gagctgttcg gggaaaatac ggcttgggcg gcatcacggc
    20641 acatcctatc aagcggtcgc agatgggcgc gatcgcattg ccgaaaggga aatccgccgt
    20701 cagcgacaat tttgccgatg cggcatacgc caaatacccg tccccttacc attcccgaaa
    20761 tatccgttca aacttggagc agcgttacgg caaagaaaac atcacctcct caaccgtgcc
    20821 gccgtcaaac ggcaaaaatg tcaaactggc agaccaacgc cacccgaaga caggcgtacc
    20881 gtttgacggt aaagggtttc cgaattttga gaagcacgtg aaatatgata cgaagctcga
    20941 tattcaagaa ctatcggggg gcggtatacc taaggctaag cctgtgtttg atgcgaaacc
    21001 gagatgggag gttgatagga agcttaataa attgacaact cgtgagcagg tggagaaaaa
    21061 tgttcaggaa ataaggaacg gtaataaaaa cagtaacttt agccaacatg ctcaactaga
    21121 gagggaaatt aataaactaa aatctgccga tgaaattaat tttgcagatg gaatgggaaa
    21181 atttaccgat agcatgaatg acaaggcttt tagtaggctt gtgaaatcag ttaaagagaa
    21241 tggcttcaca aatccagttg tggagtacgt tgaaataaat ggaaaagcat atatcgtaag
    21301 aggaaataat agggtttttg ctgcagaata ccttggcagg atacatgaat taaaatttaa
    21361 aaaagttgac tttcctgttc ctaatactag ttggaaaaat cctactgatg tcttgaatga
    21421 atcaggtaat gttaagagac ctcgttatag gagtaaataa aaatggcaat ttggaattat
    21481 cggtactacc ttatcccatc agctgctatc agaaataaat ttaatgcaaa taaagatatc
    21541 atacttgatg agtatcgatc taatggtttt cagaatttta atgagaataa aagttttgaa
    21601 aattacttta tcgataatga tgttatatta ttatcaataa taaatgaagc aaaaaaacag
    21661 cttaaattga aagaatcttg ggataaagac gcaatcatgt tttgtgataa ttttggtaat
    21721 agtcttaccg tttggccaga tgatatagag tgcgaacttg atttaagatt tgattatact
    21781 aaatttattc agaaaaccat tgattgggca ataaaatata attgtctact tgtaatagaa
    21841 aaaacaggaa atgtagtttc ccctaatata aataatctga tgtatgaaat aaaagcatat
    21901 ttggaaagca agccgtggcc catatgaaac ctaaactcaa caagtaggat gtgtgcggaa
    21961 cgcacgtatg cggttctcaa ggtttgagct aagaggccgt ctgaaaacag aaaaactgtt
    22021 tcagacgacc tttcttttaa ccagttgcca cagcaaccgg acaaaagcag cctacctcca
    22081 catccatata ggcaatacag gggagatatt ttgtaaattc tacgaatatt ttacctgcta
    22141 aacagggtag gatatggtat gaagcgaaca ttggcttaat aaacactatg tcaagatcga
    22201 atcaggctgg tactagattg ttgtattcca attatggatt gctatatata acaactgatc
    22261 attatatctc tgcaacacgg tttgtagctt ggaaatagga gtataactta tgcaattaga
    22321 gattatcggt agtaaaattt atacggaaca agattttcat aatcaaattt caaaaatatt
    22381 ttctatacaa gattattatg ggaacaatct tgatgcttta tgggatttat taagcacaaa
    22441 tgtagaacga ccgattactt tggtatggaa agatgctatg ttctcaaaaa atcaattaga
    22501 aaatatattt attgaaatcg taaatgttct agaaagagtt aagaaacaag atgaggatta
    22561 tggattcgaa gaaaaattta attatatttt agagtaagta aaccctaatt acattacgta
    22621 cacaggctta aaactcccca gagccaatta agcaagccgt aacccatata aaacttaaac
    22681 tcaacaagta gcatgtgtgc ggaacgtacg catgcggttc ttaaagtttg agctaagagg
    22741 ccgtctaaaa acagaaaaac cgtttcagac ggtctttgtt taacgccacc gatccagcgg
    22801 gttacaaagc gcagtcaatg ccgctgcgcc ttatgcctcc gaagcaatag gcagaacatt
    22861 tggacacggt gaaaacaaaa acgaaaccgc ccaagccgtc ggacatttcc ttttaggagc
    22921 agctattgcc cgcgtcaacg gtggtaattt tgctgccggc ggctcggcag cagttgcagc
    22981 tgaaaaggcg gcggaacatc ttgcccaaca gtataacgac ggtaaaaccg caatcgatcc
    23041 gcaaacaggc gagttcaatg ccaacctgct gccggaacat atcaaagagg aaatcaaatc
    23101 aaagagcggg gtgattgcat cgctgacggg cgcggccgtg ggcggcacgc cggtagatgc
    23161 gcaaaccgga ggtgcggtcg gacagaatgc ggtggaaaac aacctctatc tgacatcgga
    23221 agccttaaag aaggacaagc agacagctcg taaaatttat tccgtcataa aagagcaagt
    23281 caagcatgaa tgcagttcca caggaagaat taccgaatgt cgtcaaaata taggacgcat
    23341 tatcgaattt acccaagaca aacgctttga cagtaggttt aaggacttaa aaaaagaatc
    23401 cttatattac ctaaataaac atcctgattt agtagcctct tatttgaagg ctgaatacga
    23461 aaagctggat agggaagaca aaagtatcct gcaccgctac atctcacccg gggctgaaat
    23521 cgtttcgggc agtttggggg ttgttctttc aggagtagcc ggaggcggat cttgtgccga
    23581 gactttcggc ttaggctgtg ccgccgcttt ggttggtgta acgtcttcct acgatcatgt
    23641 cattactggg acgaaaaact tcggaaaaaa agccagcgag caacgaccga cgattgcggt
    23701 tcaggccttg aagcagttgg ggctgtcgga gcaggctgcg gaatatgttc agttctctat
    23761 agatttgttc agtgtgggta aatcgggggg cggtatacct aaggctaagc ctgtgtttga
    23821 tgcgaaaccg agatgggagg ttgataggaa gcttaataaa ttgacaactc gtgagcaggt
    23881 ggagaaaaat gttcaggaaa cgagaagaag gagtcagagt agtcagttta aagcccatgc
    23941 gcaacgagaa tgggaaaata aaacagggtt agattttaat cattttatag gtggtgatat
    24001 caataagaaa ggcacagtaa caggagggca tagtctaacc cgtggtgatg tacgggtgat
    24061 acaacaaacc tcggcacctg ataaacatgg ggtttatcaa gcgacagtgg aaattaaaaa
    24121 gcctgatgga agttgggagg tgaaaacgaa aaaaggtggg aaagtgatga ccaagcacac
    24181 catgttccca aaagattggg atgaggctag aattagggct gaagttactt cggcttggga
    24241 aagtagaata atgcttaagg ataataaatg gcagggtaca agtaaatcgg gtattaaaat
    24301 agaaggattt accgaaccta atagaacagc atatcccatt tatgaatagt aatatttatg
    24361 aaaaattagg agattaatga tgaaaagaat taagtgcttt tgtgataaat ttccatcagg
    24421 agatacattt agaatgtgta tcattctgga tgactatgat aatagggttg attattatgt
    24481 aggaatatat gattacatta cgtctacctt aatgagcgat atttactatc gatccacgat
    24541 tgatgagcat ttcaagatta tagaattaat agaaaataat ccaaatgaaa tttatgatga
    24601 tggcggtggt caacaatttt gcctagaatt tcatcatgat aaggtcattt tttaccacaa
    24661 tgaatttgat gaagaagatg gttatccagt attaagctgt tcgctgcata cttttaaaac
    24721 tgctttaatt gcttggaatg cttttttgca attgcctaaa agtattcatt cggtggtgga
    24781 gactgtgatt gaggaataag cataattagc ttaatgaata gaatcagcga tatagattgg
    24841 actgcaaatc cacgcttata cgctgtgcca tgattaagat gttagaactt gtattgaata
    24901 caagttctca taaacgaatg gcagtaagca tttgatttag ataaaatcct tgaattagaa
    24961 taatcaggtc taagagctcg acaggacaaa tgaggctggc aaccaaggat ttggcggaag
    25021 ccattaggaa aggacaggtt cgcaaatcaa gctttaacac agaacaatta agggcaattg
    25081 aaaaaggaga atctaaaata ccggattaca cttggcatca tcatcaagat acaggaagga
    25141 tgcaattgat tcgtgaaggc ttgcatcatg ataccggcca tattggttgg gaagcaatga
    25201 acaaaggaag gtaactatgt ggaaaatcat aaaagaggat agtgatgatt tagaatttgc
    25261 aattaaatgc ttattctctc agtctattga tttaaatgaa ttcaagttat ggattgaaca
    25321 agtaatacgc gatatgccca tcgaggacat ccctttttat atttttgatt tggcggattt
    25381 tgatggggga attgccgata ttgacaatat tgtaggtttt gtttcaagtt gcagactatc
    25441 aaaatcgaaa aaaaatgcct tgaccggcat tgccttctta agggggatag atgtctatga
    25501 tccgcctatt tcaaaagaaa aagcattaaa agccttagag aaacatcctg aaatttatca
    25561 gaaatttcag catttctttc cgtttgtaga gctgcccccg ctttaaacag tcaaaatgcc
    25621 gtctgaaatg atattcggct ttcagacggc atttttgata caaagcaggt aaccaaaaga
    25681 gcgtttgacg gcaaaggaga acctaaaata ccaaattaca cttggcatca tcatcaagat
    25741 acaggaagga tgcagcttgt gcctgaagaa aaacattcgc cgaccgggca tatcggcggc
    25801 agggcaatgg ataaaggaaa atgattatgt tggggcttac acggaacaat tgtgatgatt
    25861 tgggatttgc tatattgtgt tatgagcgca atgcagccga caaaaaagaa ttcttggatt
    25921 ggttatatgg aattgtcagg actgtccctg ccgaaagttt tccaacaaac gccacccgaa
    25981 gaccaaagtg ccgtttgacg gtaaagggtt tccgaatttt gaaaaagacg taaaatacga
    26041 tacgagaatt aataccgctg taccacaagt gaatcctata gatgaacccg tctttaatcc
    26101 taaaggttct gtcggatcgg ctcattcttg gtctataact gccagaattc aatacgcaaa
    26161 attaccaagg caaggtagaa tcagatatat cccacctaaa aattactctc cttcagcacc
    26221 gctaccaaaa ggacctaata atggatatag tgccgggaat ttaagcaaaa aagtcctgac
    26281 tttagtttac ataaacggca aactcaaatt cgggccaagc agtctgccgt cttcggcatt
    26341 gaaagcacct gttcccattg tcggcaaggc tgaggctccg cccggaaaag ctgtgcctgt
    26401 cggcgaagcc cgcattcctt caaatccaaa agcggtaaaa ggaacaaccg ttaccctgtc
    26461 gcaggaacaa cgcctagcca acggagagct gataccgaaa ggctctgtgg taacgtggtc
    26521 ggacaatgcg gtgaaggttg tgcggcctga tgggaaaaag cggagattta atagtcggga
    26581 ttgggaacag aaggcattgc cgaaaccgca actaccgaaa gattacagag atgacatcaa
    26641 cataggtgga aataatccta gatttaatca gcaacggcat gaaaaaatcg aatcccacaa
    26701 cccaaacaga atagaggaga tacgccaacg taatgccgtt tcttctgcag aaaggcaggc
    26761 tgatgcatta aaaaggatgc aaacgtctgg ccgcacccgc ctgcctgggc agccacaaaa
    26821 aggaaaaccc ggcgctgcta gagaaatgtc ctcttcagac aatccgaatc aaacagccga
    26881 ggcttttgca cgtcgatatt taggcaggaa acttacacta atggaacgag tcgaaggtga
    26941 aaaattatac ggaggtaaat gtgtgggctg ttggaaagcg caaatgccgg acggaacctt
    27001 tgtggtgtat aggccagcag gtaatgcttc tatgaccaag ggaactactg cgtctgttga
    27061 tattaataac ccaacattaa ataacttaaa tattaattta aaaggcaagc caacagagtt
    27121 aaaatttaaa ttccctgcta gataaggatg ttttaatgaa tttagagaca gcagaaaata
    27181 ttcaatgcga atttgagtat ttagcattag atggttattt tccaatgcat tttgcatcgc
    27241 atggtcaagg aaacaaagat tggcaatttg cagttgaatt catatataga ttattaatat
    27301 gtcaattagc aactcttgaa cctatcaact ttgaaacgaa aaatgatatt ttagactttt
    27361 gccataattt agcaaaacaa agtcctttta ataatgataa tgaggtgtgg tatcaggggg
    27421 aaattgtatt aacaaaaaaa gggatagatt taataaagga atatattcca gaggcgtttg
    27481 aagagtggaa tggaaagaaa tttgaattaa acattccttt cattaaaaca ttaaaaaata
    27541 tatttgttaa ttatgaggta gcatgggatg agaataatcc actattcccc attatatctt
    27601 taaacctcgg cacctgataa acatggggtt tatcaagcga cagtggaaat taaaaagcct
    27661 gatggaagtt gggaaatgaa aaaaggaagg ggcggaaaac ctatgacaaa tcattctatg
    27721 ttcccaaaag attgggatga ggctagaatt agggctgaag ttacttcggc ttgggagaaa
    27781 agaaaggaat tagaaggtca aaaatggaga ggtacaagta aatctggtgt tgaaatagaa
    27841 ggatttacgg aacctaatcg aacagcttat ccactttata atagtaaatg aagtattgat
    27901 taaaaaggtg tttttaaatg tataaaataa aatgttttta tgatcagttt agttctggtg
    27961 aattatttaa ctactgccag tttttagata attcttctaa tcaaaagata aatacacgag
    28021 gaacggtgta tcaatatatt atttatgttt taacaggaga cctttatcta caaaaagaca
    28081 tagatgaaaa tttagaattt atccatcaag cagaaaataa tcccaatgaa gtttattcag
    28141 gaggtggaca aggtttttgc tgggatattt ctgctgaaaa agtagttttc tatcacaacg
    28201 aatttgatga agaagacggc tggcctgatt taagctgttc gctgcatact tttaaaactg
    28261 ctttaattgc ttggaatgct tttttgcaat tgcctaaaag tattcattcg gtggtggaga
    28321 ctgtgattga ggaataagca taattagctt aatgaataga atcagcgata tagattggac
    28381 tgcaaatcca cgcttatacg ctgtgccatg attaacagga agagagcaac ttggatgggc
    28441 tagtagggat ggtaagcatt taaatatatc aattgatgga aagattacac acaaatgact
    28501 aatttaaaat tagatttcta ctctgaagtt attataaaag attcttgccc taatgatttg
    28561 ttagaaaatg gtgagactat taaaggaaaa aaaggagtgg tattaggtat aagcgaagaa
    28621 gatggtataa tctatggcta tactatttta ctttttgata taaaatattg tatatatata
    28681 gataagaaat atattatacc gactggaaaa aaattctctc gcgatgattt ttattagcta
    28741 atttaagtaa tttaagcaag ttttttagat actgaaactg gtaattatgt ttatgtaagc
    28801 ataaggagtt cagattgaag gattctacag ggcaaatgag gctggcaacc aaggatttgg
    28861 cggaagccat taaacgagga gaagtacgta gttctgcttt tacaacaaag caactaaagg
    28921 caatcgaaaa aggagaatct aaaataccgg attacacttg gcatcatcat caagacactg
    28981 gaaggatgca attgattaat gaagacttgc atcatgatac cggccatatc ggttggagag
    29041 cgatgagtaa aggaaagtaa ctatgtggaa aatcataaaa gaggatagtg atgatttagg
    29101 atttgcaatt aaatgcttat tctctcaatc tattgattta aatgaattca aattatggat
    29161 tgaacaagta atacgcgata tgcccat
//
LOCUS       DAXHRP010000008        27747 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.008, whole genome shotgun sequence.
ACCESSION   DAXHRP010000008 DAXHRP010000000
VERSION     DAXHRP010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.008"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            182..538
                     /locus_tag="ACFM72_000253"
     CDS             182..538
                     /locus_tag="ACFM72_000253"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HFC6256890.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGVYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            529..1011
                     /locus_tag="ACFM72_000254"
     CDS             529..1011
                     /locus_tag="ACFM72_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HFC6256891.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1024..1617
                     /locus_tag="ACFM72_000255"
     CDS             1024..1617
                     /locus_tag="ACFM72_000255"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HFC6256892.1"
                     /translation="MASIQNLYETVIGVLGNQAGKVISALGEITVECLPEHYISAMTA
                     LRDHEDLHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1607..2863
                     /gene="nuoD"
                     /locus_tag="ACFM72_000256"
     CDS             1607..2863
                     /gene="nuoD"
                     /locus_tag="ACFM72_000256"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HFC6256893.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2863..3336
                     /gene="nuoE"
                     /locus_tag="ACFM72_000257"
     CDS             2863..3336
                     /gene="nuoE"
                     /locus_tag="ACFM72_000257"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HFC6256894.1"
                     /translation="MLSTESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVAEYIGISPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMDTGEYLKKK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCGFMTEEAIEKKLAELE"
     gene            3726..5027
                     /gene="nuoF"
                     /locus_tag="ACFM72_000258"
     CDS             3726..5027
                     /gene="nuoF"
                     /locus_tag="ACFM72_000258"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HFC6256895.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSGNIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5027..5464
                     /locus_tag="ACFM72_000259"
     CDS             5027..5464
                     /locus_tag="ACFM72_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256896.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            5750..5989
                     /locus_tag="ACFM72_000260"
     CDS             5750..5989
                     /locus_tag="ACFM72_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC6256897.1"
                     /translation="MANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVW
                     YQFFENMPEAVAKEKTMKKWRREWKIKLIEEQNTE"
     gene            6299..8560
                     /gene="nuoG"
                     /locus_tag="ACFM72_000261"
     CDS             6299..8560
                     /gene="nuoG"
                     /locus_tag="ACFM72_000261"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HFC6256898.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMANRGEHSEIMPFISKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNEAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLASSKEELFMPLLSQEAVHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLNVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTVDGAKAIAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRNAWTGEGVQTTSDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8563..9639
                     /gene="nuoH"
                     /locus_tag="ACFM72_000262"
     CDS             8563..9639
                     /gene="nuoH"
                     /locus_tag="ACFM72_000262"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HFC6256899.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGIVGTPSAFWMFAKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            9720..10199
                     /gene="nuoI"
                     /locus_tag="ACFM72_000263"
     CDS             9720..10199
                     /gene="nuoI"
                     /locus_tag="ACFM72_000263"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HFC6256900.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            10230..10937
                     /locus_tag="ACFM72_000264"
     CDS             10230..10937
                     /locus_tag="ACFM72_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256901.1"
                     /translation="MEGLINALKYLAEHEPIDNFEEIRTRNSPIELPSGLSNFEQNIF
                     LKENLSPKLQNDDSLKTHYWIIREWGGIKSFKQSAENSQLIRQFLSELNSGKLSSGLL
                     KISSLSKLASFIDCERFAIYDSRAIFSLNWLLFKFTNADLFFQPQGRNRELEIRNMNV
                     LFHFSDIKPNYRKPDVSFHQYCGLLQDLAKQVYGKQAKPYHIEMLLFKIATTWICADM
                     DQLIKFDCLRNQDFQTA"
     gene            10973..11644
                     /locus_tag="ACFM72_000265"
     CDS             10973..11644
                     /locus_tag="ACFM72_000265"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HFC6256902.1"
                     /translation="MTFQLILFYIFAVIILYGALKTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTVNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDDLKPK
                     EEGKA"
     gene            11641..11946
                     /gene="nuoK"
                     /locus_tag="ACFM72_000266"
     CDS             11641..11946
                     /gene="nuoK"
                     /locus_tag="ACFM72_000266"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HFC6256903.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            11980..12555
                     /gene="fic"
                     /locus_tag="ACFM72_000267"
     CDS             11980..12555
                     /gene="fic"
                     /locus_tag="ACFM72_000267"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HFC6256904.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            12679..13020
                     /locus_tag="ACFM72_000268"
     CDS             12679..13020
                     /locus_tag="ACFM72_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256905.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVFPK"
     gene            13069..15093
                     /gene="nuoL"
                     /locus_tag="ACFM72_000269"
     CDS             13069..15093
                     /gene="nuoL"
                     /locus_tag="ACFM72_000269"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HFC6256906.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLVVTLPLILLAVPSVIIGYIAI
                     EPMLYGDFFKDVIFVNADAHPTIHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            15189..16685
                     /locus_tag="ACFM72_000270"
     CDS             15189..16685
                     /locus_tag="ACFM72_000270"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HFC6256907.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGSDSRAPFARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLIMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIEQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     QDINCREFAILAILAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            16695..18140
                     /gene="nuoN"
                     /locus_tag="ACFM72_000271"
     CDS             16695..18140
                     /gene="nuoN"
                     /locus_tag="ACFM72_000271"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HFC6256908.1"
                     /translation="MNWSDLNLMPAMPEIVLLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYARPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGHVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            18252..18551
                     /locus_tag="ACFM72_000272"
     CDS             18252..18551
                     /locus_tag="ACFM72_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HFC6256909.1"
                     /translation="MTASMYILLLLALIFANAPFLTTKLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(18660..19556)
                     /locus_tag="ACFM72_000273"
     CDS             complement(18660..19556)
                     /locus_tag="ACFM72_000273"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC6256910.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHVQYDEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(19540..19803)
                     /locus_tag="ACFM72_000274"
     CDS             complement(19540..19803)
                     /locus_tag="ACFM72_000274"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HFC6256911.1"
                     /translation="MSKWRGFNRKGNTMKKNAPKSFEEALSRLESLTQAMQGEMPLED
                     ALAAYQEGNELVRYCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            complement(19912..20001)
                     /locus_tag="ACFM72_000275"
                     /pseudo
     CDS             complement(19912..20001)
                     /locus_tag="ACFM72_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676973.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
     gene            complement(20028..20951)
                     /gene="rsgA"
                     /locus_tag="ACFM72_000276"
     CDS             complement(20028..20951)
                     /gene="rsgA"
                     /locus_tag="ACFM72_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HFC6256912.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETRAASPERLAFLQGITDELPG"
     gene            complement(20956..22812)
                     /locus_tag="ACFM72_000277"
     CDS             complement(20956..22812)
                     /locus_tag="ACFM72_000277"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC6256913.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFIWSSMTGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVSVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(22838..22975)
                     /locus_tag="ACFM72_000278"
     CDS             complement(22838..22975)
                     /locus_tag="ACFM72_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256914.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(22975..23559)
                     /gene="ruvA"
                     /locus_tag="ACFM72_000279"
     CDS             complement(22975..23559)
                     /gene="ruvA"
                     /locus_tag="ACFM72_000279"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HFC6256915.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVSGIGAKTALGILSAMTADELAQAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            complement(23641..23967)
                     /locus_tag="ACFM72_000280"
     CDS             complement(23641..23967)
                     /locus_tag="ACFM72_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC6256916.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(24021..24740)
                     /locus_tag="ACFM72_000281"
     CDS             complement(24021..24740)
                     /locus_tag="ACFM72_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HFC6256917.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSALV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASTSSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMIQTVLTAG"
     gene            complement(24737..24859)
                     /locus_tag="ACFM72_000282"
     CDS             complement(24737..24859)
                     /locus_tag="ACFM72_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC6256918.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(24870..25334)
                     /gene="trmL"
                     /locus_tag="ACFM72_000283"
     CDS             complement(24870..25334)
                     /gene="trmL"
                     /locus_tag="ACFM72_000283"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HFC6256919.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(25399..26124)
                     /locus_tag="ACFM72_000284"
     CDS             complement(25399..26124)
                     /locus_tag="ACFM72_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC6256920.1"
                     /translation="MDFLSCWRRIADAPTIRRCVLCHGSSGVSDGICAGCRNDLAAYR
                     TDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIHALKHLADLSM
                     VQPLADLMMQNPPDRLADECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGGERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            26123..26866
                     /gene="bioH"
                     /locus_tag="ACFM72_000285"
     CDS             26123..26866
                     /gene="bioH"
                     /locus_tag="ACFM72_000285"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HFC6256921.1"
                     /translation="MPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTADEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTPDADGIIGRILPDLAR
                     CGTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRL
                     VVMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            26868..27656
                     /locus_tag="ACFM72_000286"
     CDS             26868..27656
                     /locus_tag="ACFM72_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC6256922.1"
                     /translation="MNPQDKCWQVHRHLAEYADQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAARKGGFWQRFTGKGVVQHCQSPIAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAA
                     RSCVGTIFEREGGLGITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         6140 a         6939 c         7717 g         6951 t
ORIGIN      
        1 cgaattacgg tgtaaaaatt tatatgacct tataaaatca aataagaatc gttatcataa
       61 catgattgta tttattgggt ttttttgggc gttttgccga tatttacctt ttaatggttt
      121 ttgaaattcg ctaaaatacg aaattattgt agaaattttg ttaacggatt tgggtgtaac
      181 catgttgtcc gcttactttc ccgtctttgt ctttatcctt gtcggtcttg cagccggcgt
      241 actgtttatc ctgctcggca caattttggg cccgaaacgt cactatgccg aaaaagacgc
      301 gccttacgaa tgcggttttg aagcctttga aaacgcaagg atgaagttcg acgtgcgcta
      361 ttacctcgtc gccatcctct tcatcctgtt tgatttggag gtcgcgttta tgctgccgtg
      421 ggctgtcgtg ttcaaagatt tgggcgtgta cggcttctgg tctatgctgg tgtttatcgt
      481 cgttctgacg gtaggctttg tttacgaatg gaaaaaaggt gcgctggaat gggaatagaa
      541 ggcgttttga aaaaaggttt catcaccacc agcgcggata cggtgctgaa ctatatgcgt
      601 accggttcat tgtggccggt tactttcggc ttggcctgct gcgccgtgga aatgatgcat
      661 gcaggtatgg cgcgttatga ccttgaccgt ttcggcatca ttttccgtcc gtccccacgt
      721 caggccgacc tgatgattgt ggcaggtacg ctgaccaaca aaatggcgcc cgccctgcgc
      781 cgcgtatacg accagctcgc cgagccgcgt tgggtattgt ctatgggctc gtgtgccaac
      841 ggcggcggtt attatcacta ttcttattcc gttgtgcgcg gtgccgaccg cgtcgtgccg
      901 gtagacgttt atgtgccggg ttgtccgccg actgcggaag ccctgattta cggcctgatt
      961 cagctccaac aaaaaatcaa gcgcacttcc accatcgcgc gtgacgagta aggagaggac
     1021 gatatggcaa gcattcaaaa tttatacgag accgtcatcg gtgtgctggg caatcaggca
     1081 ggcaaagtca tttcagcttt gggcgagatt accgtcgagt gtctgcccga acactatatc
     1141 tcagccatga ccgcattgcg cgaccatgaa gatttgcatt tcgagcttct ggtcgatttg
     1201 tgcggtgtcg attacagcac ttacaaaaac gaagtatggc agggcaaacg ctttgccgtc
     1261 gtcagccagc tgctttccgt taaaaacaat caacgcatcc gcgtacgcgt ctgggtttca
     1321 gacgacgact tccccgtagt cgaatccgta gtcgatattt acaacagcgc ggattggtac
     1381 gaacgcgaag ccttcgatat gtacggcatc atgttcaaca accacccgga cttgcgccgc
     1441 atcctgaccg attacggctt tgtcggacat ccgttccgca aagacttccc gatttccggc
     1501 tatgtggaaa tgcgttacga cgaagagcaa aaacgcgtga tttaccaacc tgttaccatt
     1561 gagccgcgcg agatcacgcc gcgtatcgtc cgtgaggaga actacggtgg ccaataaatt
     1621 aagaaactac accatcaact tcggcccgca acaccctgcg gcgcacggcg tattgcgtat
     1681 gattttggag ttggagggcg aaaccatcgt ccgtgccgat ccgcatatcg gcctcctgca
     1741 ccgcggtact gaaaaactgg ctgaaaccaa aacctatctg caagccctgc cctatatgga
     1801 ccgcttggac tacgtttcca tgatggtcaa tgagcaggcg tattgtttgg cagtagaaaa
     1861 acttgccggt atcgatgtac ctatccgcgc ccagtatatc cgtgtgatgt ttgccgaagt
     1921 aacgcgcatc ctcaatcact tgatgggcat cggttcgcat gccttcgaca tcggcgcgat
     1981 gaccgccatc ctctacgcct tccgcgaccg cgaagagctg atggacttgt acgaagccgt
     2041 ttccggcgcg cgtatgcacg cagcctactt ccgtcccggc ggcgtttacc gcgacctgcc
     2101 cgacttcatg cctaaatacg agagcagcaa attccgcaat gccaaagtat tgaagcagct
     2161 caacgaatcc cgcgaaggca ccatgctcga ctttatcgat gccttctgcg aacgcttccc
     2221 caaaaatatc gacacactcg aaaccctcct gaccgacaac cgcatctgga aacagcgtac
     2281 cgtcggcatc ggcgtcgtct cccccgagcg tgccatgcaa aaaggcttta ccggcgtgat
     2341 gttgcgcggt tcgggcgtgg aatgggacgt gcgtaagaca cagccttacg aagtgtacga
     2401 caaaatggat ttcgacatcc ctgtcggcgt gaacggcgac tgctacgacc gctacctctg
     2461 ccgtatggaa gaaatgcgtc aatccgtacg catcatcaaa caatgttccg agtggttgcg
     2521 tgtcaatccg ggtccggtca ttaccacaaa ccacaaattc gctccgccca aacgtaccga
     2581 aatgaaaaca ggtatggaag acctgattca ccatttcaaa ctctttaccg agggtatgca
     2641 cgttcccgag ggtgagacct acaccgctgt cgaacatccg aaaggcgagt tcggcgttta
     2701 catcatttca gacggcgcaa ataaacccta ccgcctgaaa atccgcgcac ccggcttcgc
     2761 ccacctgcaa ggcatggacg aaatggcaaa aggccacatg ctggccgacg tcgttgccat
     2821 catcggtacg caggacatcg tattcgggga ggttgaccga taatgttatc cacagaatcc
     2881 ttaaaacaaa tcgacataga gttggcgaaa taccctgccg accaacgccg ctccgccatt
     2941 atgggtgcat tgcgtattgc ccagaccgaa aaaggctggc tcgctcccga aaccatcgct
     3001 tttgttgccg aatacatcgg catctcgcct gcacaagcct acgaagtcgc taccttctac
     3061 aatatgtacg accttgagcc tgtcggcaaa tacaaactga ccgtttgtac caacctgccc
     3121 tgcgccctgc gcggcggtat ggataccggc gaatacctga agaaaaaact cggtatcggc
     3181 tacggcgaaa ccacgcctga cggcaaattt acccttgtcg aaggcgaatg catgggcgca
     3241 tgcggcgacg ctccggtgat gctggtcaac aaccacagca tgtgcggctt tatgactgaa
     3301 gaggcgattg agaagaaact ggcggagttg gagtaggtcg tctgaaacga cgatttaaac
     3361 gtaggtcgga tacttgtatc cgacagagtg ggtaaaaagg caaaatgtcg gatttaagaa
     3421 tccgccctac tgaaataccg aaatgccgtc attcccgcgc aggcgggaat ccaccggtaa
     3481 gattcggttt ctgaatttaa taagacattg cttaccattg aggatggatt cccgcctgcg
     3541 cgggaatgac gacagacaag caagtggtcg agatccaaca aaaacgatta aaggtcgtct
     3601 gaaaatatcg atttgataaa ctagatttta tttcagacga cgttacaagc cggtacacaa
     3661 agacatctta aggtcgtctg aaacagcggc cgcaaccgat acgaaaacaa acaggcacac
     3721 caaaaatggc tatttaccaa tcaggcgtga tttttgacca agtggatacc gccaatcccg
     3781 attgttggac attggacgaa tacgtcaaac gcggcggcta taccgccctg cgtaaaatcc
     3841 tgtccggaaa catctctcaa accgatgtga ttgacgaagt caaaacctcc ggcttgcgcg
     3901 gtcgtggcgg tgcgggcttc ccgaccggtt tgaaatggag ctttatgccc cgttcctttc
     3961 cgggcgaaaa atacgtcgtt tgcaataccg acgaaggcga gccgggtaca tttaaagacc
     4021 gcgacatcat catgttcaat ccccatgccc tgatcgaagg catgattatc gccggttacg
     4081 cgatgggcgc gaaagccggt tacaactata tccacggcga aatttttgaa ggctaccaac
     4141 gctttgaggc cgctttggag caggcgcgtg ccgcaggctt tttgggtaaa aatattttgg
     4201 gttcggattt tgaatttgaa ctcttcgccc accacggcta cggcgcatat atttgcggcg
     4261 aggaaaccgc attgctcgaa tcgctggaag gcaaaaaagg ccagccgcgc tttaagccgc
     4321 cattccctgc ttcgttcggc ctgtacggca aaccgactac catcaacaat actgaaacgt
     4381 tctcctccgt tccattcatt atccgtgacg gtggacaggc atttgccgat aaaggtattc
     4441 cgaatgcagg cggtaccaaa ttattctgta tttccggcca tgtcgagcgt ccgggcaact
     4501 atgaagtgcc attgggtacg ccgtttgccg aagtcttgaa aatggcgggc ggtatgcgcg
     4561 gcggtaaaaa actcaaagcc gtcattcccg gcggttcgtc cgcgcccgta ttgcctgccg
     4621 acatcatgat gcagaccaat atggactacg actcgatctc caaagcaggc tccatgctcg
     4681 gttccggcgc gattatcgtg atggatgaag acgtgtgcat ggtcaaagcc ctcgaacgct
     4741 taagctactt ttactacgat gaatcctgcg gccaatgcac cccgtgccgc gaaggtacgg
     4801 gctggctcta ccgcatcgtc caccgcatcg tagaaggcaa aggtaaaatg gaagatttgg
     4861 atttgctgga ttctgtcggc aaccaaatgg caggccgcac catctgcgcc ctcgccgatg
     4921 ccgccgtctt ccccgtccgc agctttacca agcatttccg tgatgagttt gtgcattaca
     4981 tcgaacacgg cggaccgatg aaagagcata agtggggagg gtggtaatgg tggaagctaa
     5041 aatttttatt ctatacggtg cagccaacaa aggtaagagt acgacactca atacgctttt
     5101 taatcagatt tgtcggaaat tttctaaatt tctagtcttt tttgaaagac atggaaacgg
     5161 cttagatttt gttgcagtat ttgatcatga aggtcagagg attggttttt attcatctgg
     5221 tgataatgaa tacgaggtta ggagaaattt atacaaactt tattcgcata attgtgattt
     5281 tatttttggc acgtcaagga cacggggtgg tagttgcgat gcagtaggat gttatgcaga
     5341 gttattgcat ggcgatgtaa atataattaa ttggtgtgaa aagtttgagc ctacagatga
     5401 agacaatgag cgtgctgtta aagagttatt taagtcattt aaaaatataa taaataagtt
     5461 atagttttag ttggttttat attggttaaa agcaaaatgc taaaaattta actttgccgt
     5521 cattcccgcg taggcgggaa tacatagtgg aatttacaga acccgatatt tgaaaagcag
     5581 ttgccgaaat tcaaaaaatg gattcccgcc tacgcgggaa tgacggcggg agtaggcaga
     5641 tgttttcaga tgaaaacggt tgtaaatgat attaaaaaag ttgttgttta tattgcagga
     5701 aaaatgaata cgaaaccatc cgcttactag acaacctgcc gtatatattt tggcaaacgg
     5761 taaaaatgga acactctata tcggtgttac catgaatttg ccggaaaggg tttggcagca
     5821 caaaaaccat gtcaatattg atggctttac tgcccgatat gatgtgcatg atttagtttg
     5881 gtatcagttt tttgagaata tgcctgaagc agttgccaaa gaaaaaacga tgaaaaaatg
     5941 gcgacgtgaa tggaagatta aactgattga agaacaaaat actgaatgat tggacttgtc
     6001 gggcgtgttg tttgtttagt tttatttctg gaactttaaa aactgtcgtt attccagccc
     6061 cacctacgcg cagacaggct acggcgggaa tcaccgcaaa agttaagaaa ccaatgtttg
     6121 aaaacagtta ccgaaaaccc aagaatggat tcccgcctgt gcgggaatga cggcaaggtg
     6181 gcagtaaacg ttttaaacag tattgattgt caatgaaact caaaaggccg tctgaaaccc
     6241 atttttcaga cgacctccat aagattattt atcaaatacc cgtaactagg aacgaaccat
     6301 gttacaaatc gaaatcgacg gcaaacaagt atctgtggag cagggcgcga cggtgattga
     6361 agccgcgcac aagctcggta cttatattcc gcatttctgt taccacaaaa aactttccat
     6421 cgccgccaac tgccgtatgt gtctggtgaa cgtagaaaaa gccccaaaac ccctgcctgc
     6481 ctgtgccacg ccggttacag acggcatgat tgtgcgtacg cattcggcaa aagcccgaga
     6541 ggcgcaggaa ggcgtgatgg agttcctgct catcaaccat ccgcttgatt gtccgacctg
     6601 cgaccaaggc ggcgaatgcc agttgcagga tttggcggtg ggctacggca aaaccaccag
     6661 ccgctatacc gaagaaaaac gttctgtcgt cggcaaggac atgggtcctt tggtttccgc
     6721 cgaggaaatg agccgttgta tccactgtac ccgttgcgtt cgtttcactg aagaaatcgc
     6781 cggtttgcag gaaattgcga tggcgaatcg cggcgaacac tccgaaatca tgccctttat
     6841 cagcaaagca gtggaaaccg aattgtcagg caacgtcatc gatttatgtc ccgtcggcgc
     6901 attgaccagc aaaccgttcc gcttcaacgc gcgtacttgg gaattgaacc gccgcaaatc
     6961 cgtttccgcc catgatgctt tgggcagcaa cctgattgta caaaccaaag accataccgt
     7021 ccgccgcgtg ttgccgttgg aaaacgaagc catcaacgaa tgctggctgt ccgaccgcga
     7081 ccgttttgcc tacgaaggcc tgtatcacga aagccgtctg aaaaacccga aaatcaaaca
     7141 gggcggcgag tggatggacg tggattggaa aaccgcgttg gaatatgtcc gcagcgcgat
     7201 tgaatgtatc gccaaagacg gcaaccaaaa ccaagtcggc gtttgggcga acccgatgaa
     7261 tacggttgaa gagctgtatc tggcgaaaaa actcgccgac ggcttgggtg ttaaaaactt
     7321 tgccacccgt ttgcgccaac aagacaaacg tctttcagac ggccttaaag gtgcgcaatg
     7381 gttgggacaa agtatcgaat cgctggcgga caacgaagcc gtattggtag tcggcgcgaa
     7441 cctgcgcaaa gaacagccgc tcctgaccgc ccgcctgcgc cgcgccgcta aagaccgcat
     7501 ggctttgagc gtattggcaa gcagtaaaga agaattgttt atgccgcttc tgtctcaaga
     7561 agccgtacat cccgacgagt gggcaggtcg tctgaaaaac ctgtctgccg atgcggaaca
     7621 cgccgttacc gccagcctga aaaacgctga aaaagcagcg gtgattttgg gcgcggaagt
     7681 gcaaaaccat cctgattacg ccgccattta tgccgccgcg caagagctgg cggacgcgac
     7741 cggcgcagtg ctgggtattt tgccgcaagc cgccaacagt gttggtgcgg atgtcttgaa
     7801 tgtaaactcc ggcgagagcg ttgccgaaat ggcaaacgcg ccgaaacagg cagtcttgct
     7861 gctcaatgtc gagcctgaaa tcgatactgt tgacggtgca aaagccatag ccgcgttgaa
     7921 acaggcgaaa agcgtgatgg cgtttacgcc gtttgtcagc gaaacgctgc tggacgtgtg
     7981 cgacgtgttg ttgccgattg caccgtttac cgaaacctca ggcagcttca tcaatatgga
     8041 aggccgtctg caatctttcc acggcgtggt acaaggcttc ggcgattcgc gtccgatgtg
     8101 gaaagtattg cgcgtattgg gcaatctgtt tgacctgaaa ggttttgaat atcacgatac
     8161 cgctgcgatt ctgaaagacg cgctggatgc agaaagcctg ccgtccaaac tggacaaccg
     8221 caacgcatgg acaggggagg gcgttcagac gacctcagac cgcctcgtcc gtgtcggcgg
     8281 cgtcggtatt tatcacaccg attctatcgt gcgccgttcc gcaccgttgc aagaaaccag
     8341 ccatgccgcc gtgcctgctg cgcgtgtaaa tccaaataca ttggcacgct tgggcctgca
     8401 agacggacaa accgctgtcg ccaaacaaaa cggcgcaagc gtatcggttg ccgtcaaagc
     8461 cgatgccgga ctgcctgaaa acgtggtgca tctgccgctg cataccgaaa atgccgcgct
     8521 gggtgcgttg atggacacta ttgaactggc gggagcttga ttatgcagga atggttccaa
     8581 aacctctttg ccgcaacgct cggtctgggc gatttgggta ttactgtagg cttggtggta
     8641 tccgtcatcg tcaaaattgt gattatcctg attccgctga ttctgaccgt cgcctacctg
     8701 acttatttcg aacgtaaagt catcggcttc atgcagcttc gcgtcggtcc gaacgtaacc
     8761 ggcccgtggg gtctgattca gccgtttgcc gacgtgttca aactcttgtt taaagaagta
     8821 acccgtccga agctgtcaaa caaagccctg ttctatatcg gcccgattat gtcgcttgcc
     8881 ccgtctttcg cggcgtgggc agtgattccg ttcaatgaag aatgggtgct gaccaacatc
     8941 aatatcggtc ttttgtacat cctgatgatt acctcgctgt cggtttacgg cgtgatcatc
     9001 gcgggctggg cttccaactc caaatattcg ttcttgggcg caatgcgtgc ttccgcgcaa
     9061 agcatttcct acgaaatcgc catgagtgcc gcgctggtgt gcgtcgtgat ggtgtcgggc
     9121 agcatgaact tctccgacat cgttgccgcg caggcaaaag gcatcgcagg cggttcggta
     9181 ttctcttgga actggctgcc gctcttcccc atcttcatcg tctatctgat ttccgccgtt
     9241 gccgaaacca accgcgcacc gtttgacgtg gcagagggcg agtctgaaat cgttgccggt
     9301 caccacgtcg aatattccgg cttcgcattc gcgctgttct tccttgccga atacattttc
     9361 atgattctga ttgccgcgct gacatcgttg atgttcctcg gcggctggct gtctcccttc
     9421 ccgcaaagct ggggcattgt cggtacgcct tccgcatttt ggatgttcgc gaaaatggcg
     9481 gcggttctgt actggtatct gtggatacgc gccaccttcc cacgctaccg ttacgaccaa
     9541 atcatgcgct tgggctggaa agtgctgatt ccgatcggct tcgcctacat cgtgattttg
     9601 ggcgtgtgga tgatttcacc gctgaatttg tggaaataag tttcagacgg catcttgagg
     9661 ccgtctgaac aaagcgattt tgaataccta acgaaatccc tgttttgagg gaacataata
     9721 tggctaactt agtaaaaacc tttctgcttg gcgaattggt aaaaggtatg ggcgtaacgc
     9781 tcaaaaactt tttcgcccgc aaagacacaa tttatttccc cgaagagaaa acgccgcaat
     9841 ccgtgcgttt ccgcggtctg cacgcgcagc ggcggtatcc gaacggcgaa gagcggtgta
     9901 tcgcgtgtaa gttgtgtgag gcagtgtgtc cggcaatggc gattaacatc gaatcggaag
     9961 aacgtgaaga cggtacgcgc cgcaccaagc gttacgacat cgacctgacc aagtgcatct
    10021 tctgcggttt ctgcgaagag gcatgcccga ctgatgcgat tgtggaaacc catatttttg
    10081 aataccacgg cgagaaaaaa ggcgacttgc acatgaccaa gccgattctt ttggccattg
    10141 gcgacaaata cgaagctgaa atcgccaaac gcaaagccgc tgacgcgccg tatcgttaat
    10201 gctttggggc ttcttggaag gttttaaata tggaaggact gattaatgca ttgaaatatt
    10261 tagccgaaca tgagccaata gataattttg aagaaattag aactagaaat agtccgattg
    10321 agttgccaag tggattaagt aattttgaac aaaatatttt tttaaaagaa aatttatccc
    10381 caaaattaca aaatgatgat agcttgaaga cgcattattg gattatccgt gaatggggtg
    10441 ggattaaaag ttttaaacaa tctgctgaaa atagccagct tattcgtcaa tttttatcgg
    10501 aacttaattc gggaaaattg agtagtggtt tgttgaaaat ttcatcatta tctaaattgg
    10561 cttcttttat agattgtgag cgattcgcca tttatgattc acgcgctatt ttttcgttga
    10621 attggttgtt gtttaaattt acaaatgcag atttgttttt tcagccacaa ggtagaaata
    10681 gggaactaga aatccgaaat atgaacgtat tgtttcattt ttctgatatc aaaccgaatt
    10741 atcggaaacc agacgtttcg tttcatcaat attgtgggtt gttacaagat ttggcgaaac
    10801 aagtttatgg taaacaagca aaaccgtatc acatagaaat gttgttattc aaaattgcga
    10861 caacgtggat ttgtgcggat atggatcaac tgattaagtt tgattgtttg cgtaaccagg
    10921 attttcagac tgcttgaaac catatttttg attaataaag aaagcataga ctatgacttt
    10981 ccaactgatt ttattttata tttttgcagt gataattctt tatggcgcgc tcaaaaccgt
    11041 caccgctaaa aaccctgttc acgccgcttt gcatctggtg ctgaccttct gcgtgagcgc
    11101 gatgctttgg atgctgatgc aggctgagtt tttgggcgtg acgctggtgg tggtttacgt
    11161 cggcgccgtg atggtgttgt tcctgttcgt cgtgatgatg ttgaacatcg acattgaaga
    11221 aatgcgtgcc ggtttctggc ggcacgcgcc tgttgccggt gtggtcggca cattgttggc
    11281 ggttgcgctg atcctgattc tggtcaaccc gaaaaccgac cttgccgcat ttggtctgat
    11341 gaaagacatt cctgccgatt acaacaatat ccgcgatttg ggcagccgta tttataccga
    11401 ctatctgttg ccgtttgaat tggcggcggt attgctgttg ttgggtatgg tggcggcgat
    11461 tgcgctggtt caccgtaaaa cggttaatcc gaaacgcatg gatcctgccg accaagtcaa
    11521 agtacgcgcc gaccagggcc gtatgcgtct ggtgaaaatg gaagcggtca aaccgcaagt
    11581 cgaatctgcc gaagaaagcg aagtttcaga cgacctcaag ccgaaagagg agggcaaagc
    11641 atgattacct tgacgcatta tttggtattg ggtgcgctcc tgttcggtat cagcgcaatg
    11701 ggtatcttta tgaaccgcaa aaacgtgctg gtattgctga tgtcgatcga gctgatgctt
    11761 ttggcggtga acttcaactt tatcgccttc tcgcaacatt tgggcgatac tgccggacaa
    11821 attttcgtat tcttcgtatt gaccgttgcc gctgccgaat ctgccatcgg tttggcgatt
    11881 atggtgctgg tgtaccgcaa ccgacaaaca atcaacgttg ccgatttgga cgagttgaaa
    11941 gggtaaaggt aggttgggtc gagacctgac aagacaccga tgccgtctga aaacccgata
    12001 ggaaaaacga tgaaatccat agacgaacaa agcctgcata atgcccgccg cctgtttgaa
    12061 agcggcgaca tcgaccgtat cgaagtcggt accaccgcgg gcctgcaaca gattcaccgt
    12121 tacctgttcg gcggcttata tgattttgcg ggtcaaatca gggaagacaa catttccaaa
    12181 ggcggttttc gttttgccaa cgccatgtat ttaaaagagg ctttggttaa aatcgagcag
    12241 atgcccgagc ggacttttga agaaatcatc gccaaatatg ttgaaatgaa cattgcccat
    12301 ccgtttttgg agggtaatgg cagaagtacc cgcatctggc tggatttggt gctgaaaaaa
    12361 aacctgaaaa aagtcgtgaa ctggcaaaat gtaagtaaaa ccctgtattt gcaggcgatg
    12421 gaacgcagcc ccgtcaacga tttagaactg cgctttctgt taaaggacaa cctgactgac
    12481 gatgtggaca accgtgaaat catctttaaa ggtatcgagc agtcgtatta ttacgaaggg
    12541 tatgaaaaag gctgagggtc gtctgaaaag cgatttcaga ctgtttcaga cgacctgatt
    12601 cggtaggtga tcagacggga gcggatgaga aaagaaattc tgggtaagaa taatccggtc
    12661 tgaaatattg gaagaagaat gatggataaa aatcagttag aacaagaatt tcataaagcc
    12721 atgttaaata tttatcagga ggctttgaat ttgccgcaac cttacaaggc gacacgattt
    12781 ttacaaattg taaatgaatt tggtggtaaa gaggcggcgg ataaattatt gagtacgggg
    12841 gaaaagaaga ctcagaccgg ttttacagag ctgattttga gtggtggcgg agtccacgcc
    12901 ttgaaataca gtatggaata tctggtgtta caaaagccgt ggtgtgattt atttactgaa
    12961 gagcaattag ctgtggcacg caaacgattg gagcgtgttg gatttgtttt tccgaagtaa
    13021 ttttgtacga aacaaacata gatttttaaa tcaatcggat tcaatcaaat gaacgatatg
    13081 actttatatt tgataattgc ccttgttccg ttggcaggct cgctgattgc gggtttgttc
    13141 ggcaacaaaa tcggacgtgc cggtgcgcat acggttacga tactcggcgt ggcggtgtcc
    13201 gccgtgctgt cggcttatgt gctgtggggc tttattgacg gcagccgcgc caagtttgac
    13261 gagaatgtct atacctggct gacaatgggc ggcttggatt tctccgtcgg cttcttggtc
    13321 gatacgatga cggcgatgat gatggtcgtg gtaacgggcg tgtcgttgat ggtgcatatc
    13381 tataccatcg gctatatgca cgatgaaaaa gtcggctacc aacgcttctt cagctatatt
    13441 tctttgttta cattcagtat gttgatgctg attatgagca acaacttcat tcagctcttc
    13501 ttcggttggg aagcggtggg cttggtgtcg tatctcttga tcggtttcta tttcaaacgc
    13561 ccgagcgcga catttgccaa cctgaaagcc tttttgatca accgtgtcgg cgacttcggc
    13621 tttttgctcg gtatcggctt ggtgcttgcc tatttcggcg gcagcttgcg ctatcaagat
    13681 gtattcgctt atctgcccaa cgtgcaaaat gccactatcc aactgttccc cggtgtggaa
    13741 tggtctttga ttactgtaac ctgtttgctc ctgtttgtcg gtgcgatggg taaatcggca
    13801 caattcccgc tgcacgtctg gctgcctgat tcgatggaag gcccgacccc gatttctgca
    13861 ttgattcacg ccgcaaccat ggttaccgcc ggtttgttta tggtgtcgcg tatgtcgccg
    13921 atttatgaaa tgagcagcac cgcgctgtcg gtcattatgg tgatcggcgc gattaccgcc
    13981 ctgtttatgg gctttttggg cgtgattcaa aacgacatca aacgtgtagt tgcgtattcc
    14041 accctgtcgc aattgggcta catgaccgtg gctctgggcg cgtctgccta ttccgtggcg
    14101 atgttccatg tgatgaccca cgccttcttt aaagccctgt tgttcttggc ggcaggcagc
    14161 gcgattatcg gtatgcacca cgaccaagac atgcgccata tgggcaatct gaaaaaatat
    14221 atgccggtta cttggctgac catgctgatc ggtaacttgt cgctgattgg tacgccgttc
    14281 ttctccggct tctactccaa agattcgatt atcgaagcgg cgaaatacag cacactgccg
    14341 ggcagcggct ttgcctattt tgccgtcctc gccagcgtgt ttgttaccgc gttttacgcg
    14401 ttccgccaat actttatggt gttccacggc gaagagaaat ggcgcagcct gcccgaacac
    14461 cattcagacg gccacggcga agaacatcac ggtttgggta aaaacgacaa tccgcacgaa
    14521 agcccgttgg tggttaccct gcctttgatt ttgcttgccg ttccgtccgt catcatcggc
    14581 tacatcgcca tcgaacccat gctctacggc gatttcttca aagacgtgat tttcgtcaac
    14641 gccgacgcgc atccgactat acacatcatg aaggaagagt tccacggcgc attggcaatg
    14701 gtgtcccaca gcctgcattc gcccgtactc taccttgcta tcgcaggcgt gttgagcgca
    14761 tggcttttgt acgtcaaact gccgcacctg ccagcgaaaa ttgcacagac gttccgtccg
    14821 atttacgttt tgtttgaaaa caaatactac ctcgacgccc tgtatttcaa cgttttcgcc
    14881 aaaggcacac gcgcattggg cactttcttc tggaaagtcg gcgataccgc cattattgac
    14941 aacggtattg tcaacggctc tgccaaactg gtcggcgcga ttgccgcgca agtgcgtaaa
    15001 gcccaaaccg gctttatcta cacctacgcc gccgctatgg tgttcggcgt attggtcttg
    15061 ctcggcatga ccttctgggg attgttccga taagaataag gtttcagacg gccttaaacc
    15121 ttcaggccgt ctgaaacgaa gaaatatcca cataaacaca tttttatttt aaccacaggt
    15181 taaccactat gttttccaac tacctactca gcttggcaat atggataccc atcgccgcag
    15241 gcgtgctggt tttggcaacg gggtcggaca gccgtgcgcc gtttgcccgc gtgctcgcct
    15301 tcatgggtgc gcttgccggt ttcttggtaa cactgcccct gtttaccggt ttcgaccgtt
    15361 tgagcggcgg ctatcaattt accgagttcc acgagtggat tccgcttctg aaaatcaact
    15421 acgcattggg cgtggacggt atttcagtgc tctttatcat cttgaatgcg tttattacgc
    15481 tgttggtggt attggcaggt tgggaagtca ttcagaaacg tccggcgcag tatatggcgg
    15541 cattcctgat catgtcgggt ttgattaacg gcgcgtttgc cgcgcaggat gcgattctgt
    15601 tttatgtgtt cttcgagggt atgctgattc cgctgtacct gattatcggt gtatggggcg
    15661 gtccgcgccg cgtctatgcg tcggtcaagc tcttcctcta cacgctgatg ggttcgctcc
    15721 tgatgctggt tgcgatggtt tacctttatt atcaaacagg cagcttctct attgtcgatt
    15781 tccaaaacat cgaacagatt ccgttgggcg tacaacagct tttgtttgtg gcgttcttcc
    15841 tgtcatttgc cgtaaaagtg ccgatgttcc ctgtgcacac ttggttgccg gatgcccacg
    15901 ttgaagcgcc gaccggcggt tcgatggtgt tggcggccat tacgctgaaa ctgggtgcgt
    15961 atggtttctt gcgctttatc ctgccgatta tgccggatgc ggcacgctat tttgcccccg
    16021 tgatcatcgt attaagtctg attgccgtga tttatatcgg tatggtggct ttggtgcaaa
    16081 ccgatatgaa aaaactggtg gcgtattcgt ccatcagcca tatgggtttt gtaacgcttg
    16141 ggatgttttt gtttgttgac gggcagttgg acgactgggc attgaaaggt gcaatcattc
    16201 aaatgatttc gcacggtttc gtgtctgccg cgatgtttat gtgtatcggc gtgatgtacg
    16261 accgcctgca cacgcgcaat attgctgatt atggcggcgt ggtcaatgtg atgcccaagt
    16321 ttgcggcgtt tatgatgctg ttcggtatgg cgaacgcggg tttgcctgcg acttccggct
    16381 tcgtgggcga gtttatggtg attatgggcg cggtcaaagt gaatttctgg gtcggcgcgt
    16441 tggccgccat gaccctgatt tacggtgcat cttataccct gtggatgtac aaacgcgtta
    16501 tttttggtgc gatccacaat ccgcacgttg ccgaaatgca agacatcaat tgccgcgaat
    16561 ttgcgatttt ggcaattttg gcggtggctg ttttgggtat gggcctgtat ccgaacgcat
    16621 ttatcgaagt ggtgcatcag gcggcaaacg atttgattgc ccatgtggca caaagcaaga
    16681 tttgaggtgt gtaaatgaac tggtctgatt tgaatttaat gcccgccatg cccgaaatcg
    16741 tgctgctgtc gctgctggtg ttattgttgc tggcggactt gtgggtcagt gatgacaaac
    16801 gccggtggac gcattacggc gcgttggcaa cggtggcggt tacggctgtg gtgcagttgg
    16861 cggtgtggga acagggcagc acgtcttcgt tcaacgggat gtatattgca gacggtatgt
    16921 cgcgtttggc aaaaatggtt ttatatgcct tgacctttgc cctgtttgtc tatgccaggc
    16981 cctacaacca agtgcgcggt attttcaaag gcgagtttta caccctgtcg ctgtttgccc
    17041 tcttgggtat gggcgtgatg gtgagcgcgg ggcatttttt aactgcctat atcggtttgg
    17101 aactcttgtc gcttgccctt tacgccctga ttgccctgcg ccgcgattcc ggctttgccg
    17161 ccgaagccgc cttgaaatat tttgttctgg gcgcgctggc atccggcctg ctgctctacg
    17221 gtatttctat ggtttacggc gcaaccggtt cgctggaatt tgccggcgtg ctcgcctctt
    17281 ccttcaatga agaagcaaac gaatggctgt tgaaactggg tctggtgttt atcgtcgtcg
    17341 ccgttgcgtt caaactcggc gcggtgccgt tccatatgtg ggtgcccgac gtgtatcacg
    17401 gcgcgcccac ttctgttacc gccctggtcg gcactgcccc gaaaatcgcc gccgttgttt
    17461 tcgctttccg catcctcgtt accgggttgg gaaccgtgca tcatgactgg tctctgatgt
    17521 ttgccctgct tgccgccgcc tcgctgctgg tcggcaacct tgccgccatc atgcagacca
    17581 atatcaaacg tatgctcgcc tattccaccg tatcgcatat ggggtttatc ctgctggcgt
    17641 ttatggcggg cgcggtcggc tttgcggcgg gtctctatta cgccattacc tacgcgctga
    17701 tggcggcggc agggttcggt gtgttgatgg tgttgtcgga cggggacaac gagtgcgaaa
    17761 acatcagcga tttggcaggg ttgaaccaac accgcgtatg gcttgccttt ttgatgctgc
    17821 tggttatgtt ctctatggcg ggcattccgc cgctgatggg cttttacgcc aaattcggcg
    17881 tgattatggc gctcttgaaa caaggccatg tttggttgtc cgtatttgcc gtcgtgatgt
    17941 cgctgattgg tgcgttctac tacctgcgcg tggtcaaagt catgtatttt gacgaatccg
    18001 gccgcgcccg tcccaccgtc ggcggcaaca atgccgcaaa attccttttg agcgtcaacg
    18061 cgctgctgtt ggtgctgtgg ggcattatgc cgcaaaccgt tatcgactgg tgcgccaagg
    18121 cgttggaaaa cacgctgtaa gccgccgcaa cggcagccgt gtcagaggct gccgtttttg
    18181 ttaagatatg ccgttccgca acgcagttca gacggcatcg ccgccgacaa tgcccaaaca
    18241 gaaagcccgc catgaccgca tccatgtaca tccttttgct gcttgccttg atttttgcca
    18301 acgccccctt cctcacgacc aagctgttcg gcatcgtacc gctcaagcgc aaacatttcg
    18361 gacaccacct gatcgagctg gcggcaggtt tcgcgctgac cgccgttctt gcctacatcc
    18421 tcgaatcccg tgcgggagcg gtacacgatc agggttggga gttttacgcc accgtcgtct
    18481 gcctgtacct gatttttgcg tttccctgtt tcgtgtggcg gtatttttgg cacacgcgca
    18541 acagggaata ggcaggcata ggaatgccgt ctgaaacctg ttcagacggc atttgtttca
    18601 ttcaagtgca ggccggcatc gctgtgccgg cacgtttcag ccggcgatat acgccggttt
    18661 taatatttgc gggcgactgc aaattctgcc aactgccgca ggcgcagggc tttgtcgccg
    18721 aagggttcga gcagcgcgac cgcttcggca accagtttgt gtgcgtatga gcgcgccgct
    18781 tccaagccca tcagtttcac ataagtcggc ttgtcgttgt ctgcgtcttt gcccgccgtt
    18841 ttgcccaaag tcgccgtgtc cgcttcacaa tccaacacat cgtcaatgac ttggaacgcc
    18901 agccccagtt ttgccgcata atcgtccaat accgccagac tgtcttcaga cagattcggg
    18961 caggacatcg cccccaataa aaccgccgca cggattagcg cacccgtttt caggctgtgc
    19021 atctgttcca aatcggcttg aaccatttgt ttgccgacat tcgccaaatc gattgcctga
    19081 ccgcccgcca tgcccgcgct gccgcccgct ttcgccaaca ccgacaacat tgccaactgg
    19141 cgtgctgcgg gcagttctgt cggacggctt aacacgtcga aggcttgggt ttgcaaagcg
    19201 tcgccgacca gtagcgcggt ggcttcgtcg tattgcacat ggcaagtcgg tttgccgcgc
    19261 cgcaggctgt cgttgtccat cgccggcata tcgtcgtgaa ccaaagaata gacgtggatc
    19321 atttcgattg ccgccattgc ctgtccgacc gcatccgcca cgaccccgcc caattccgaa
    19381 gccgccagca ccagcatcgg acgcagacgc ttgccgccgt ccaaagccgc atagcgcatc
    19441 gcttcgtgca gcgtgtgcgg gatttcgttt tcagacggca aaaagcgttc cagcagcagc
    19501 tctgtctgtg cctgcgccct ctgttgccac gctttcaaat cattcgtcgg attcaaggtt
    19561 caactccttc agcccgtccg catccaaaac ctgtaatttc tgttcgactt gcgccagctt
    19621 ggtttggcag tatctgacca gctcgttgcc ttcctgatag gcggcaagcg cgtcttccaa
    19681 gggcatttcg ccctgcatag cttgtgtcag cgattcaagg cgcgacaagg cttcttcaaa
    19741 cgatttcggg gcgtttttct tcatcgtgtt tccttttcgg ttgaaacccc gccacttgga
    19801 catctgtcct tcggggcggt agaatcagac tttatttggg aggggtgtaa gcccttccaa
    19861 atcaggacga cacatagggc ggtgctttaa gtgtcgtcct gcgtgttgga acatagtttc
    19921 ggatgttccg gtaaaaagcg gattgtagca tttttgaaaa acggatgccg tctgaaaccc
    19981 gaatccggtt tcagacggca ttgttttgtc ctgcaaacgg caaggcgtta cccgggcagt
    20041 tcgtcggtga tgccctgcaa aaaggcgagg cgttcggggc ttgccgccct ggtttcggcg
    20101 gcggctttga aggcgcagcc gggttcggcg cggtgggtgc agttgtggaa gcggcattgc
    20161 ccgacaaggt ggcggaaatc ggggaaatag cgcggcaaat cggcggcttg gaggtggtgt
    20221 aaaccaaatt cttgcaaacc cggggagtcg atgagttggg tttcgccgtt caaatcataa
    20281 agccgggcgt gggtggtggt gtgttttccc gagtcgagtg cggcggaaat gtcgccggtg
    20341 cgggcggttt ggctgcccaa aagggcgttg gtcagggtgg atttgcccat accgctctgc
    20401 ccgagcagga tgttgctgtg cccttgcagg gcggggcgca ggctgccggc gttttccagt
    20461 gcgcgggttt cgatgacggg ataacccagc gtttcgtaga atttgagttt ttcgcgccaa
    20521 agggcggttt cgggcaggtc ggctttgttc aggacgatga cggcgcggat gccggcggct
    20581 tcggcggcaa gcagggcgcg ctgtagcagc cgcacgctcg gactcgggac ggcggcggtt
    20641 acgatgagga gttgggtaac gttggcggca atgagtttgg ttttccacgc gtcttggcgg
    20701 tagagcaggc tttggcgcgg taaaaaatct tcaatcacaa cttgttcggc gttgacgggg
    20761 ctgatgcgga cgcggtcacc gcaggcgaaa tcgacgcgtt ttttgcgggt gctggcttcg
    20821 taggttgtgc cgtcgggcgt gcggacgatg tagcggcggc cgtagctggc ggtaatttgg
    20881 gcggtgtcgt tcatggtttc tttggggttg ggtgtggaaa tgccgtctga aaacgggtgt
    20941 tcggacggca tcggttcagt cgtgctgcca ctcgacgtgt tcgttgagga agccgccgct
    21001 ctggtgcgcc cagagtttgg cgtaaagccc gcgtttttcg aggagttcgg cgtgtgtgcc
    21061 ttcttcgatg atgcggcctt tgtcgaggac gacgagcctg tccattgcgg cgatggtgga
    21121 gaggcggtgg gcgatggcga tgacggtttt gccgtccatc attttgtcga ggctttcctg
    21181 gatggcggct tcgacttcgg aatcgagcgc gctggtggct tcgtccaaaa gaagaatcgg
    21241 cgcgtctttg agcatcacgc gggcaatggc gatgcgctgg cgttgcccgc cggagagttt
    21301 cacgccgcgt tcgccgacgt gcgcgtcata gccgcgccgc cctttggcat cggaaagttc
    21361 ggggatgaag ccggcggctt cggcgcgttc ggcggcagaa accatttcgg catcggtcgc
    21421 gtcggggcgg ccgtaaataa tgttgtcgcg cacggaacgg tgcagcagcg aggtatcttg
    21481 cgtgaccaaa ccgatttggg cgcgtaaaga ttcttgggta acgccgctta tgtcctgccc
    21541 gtcgatcgaa accgtgccgc tttgcggttc gtagaagcgc aaaagcaggt tgacgatggt
    21601 ggatttgccc gcgccgctgc gtccgatcaa gccgaccttt tcgccgggtc ggatggtgag
    21661 gttgaagccg ttgagcagcg gtttgcccgc ttcgtaggag aaatcgacgt gttcgaactt
    21721 gatttcgcct tgcgacactt tcagcggcag ggcgttcggc ttgtcgagga tggtgtgcgg
    21781 tttggacagg gttgccatgc cgtcgccgac ggtgccgatg ttttcaaaca gccgcgcgga
    21841 ttcccacata atgtattgcg acaaaccgtt gacgcgcaac gccatggcgg tggcggtggc
    21901 gaccgcgccc acgctgacct gcccgttgtg ccagagccag atgcccagtg cggcggtgga
    21961 gagggtcagg gaggtgttga cgatgaagct gcacgaatgc agcagcgtcg ccagccgcat
    22021 ttgggcgcgc accgtaacca taaattcttc catcgactgc ttggcatagg cggcttcacg
    22081 cgcgccgtgg gagaagagtt tgacggtggc gatattggaa taggcatcgg taatgcggcc
    22141 ggtcatcagc gagcgggcat ccgcctgcca tgcggcggtt tgccccaatt tgggaatcag
    22201 caggcgcatc accgaagcga aaccgacaat ccagccgata aagggcagca gcagccatga
    22261 gtcgagcgag gcgagaatca cgccggaggt aatgaaatac accgacacat aaacgaccat
    22321 atcggcaacc gtcatcaccg cgtcgcgcaa cgccagcgcg gtctgcatga ctttggcgga
    22381 cacgcgtccg gcaaattcgt cctgataaaa accgaggctt tggttcagca tcaggcggtg
    22441 gaagttccag cgcaggcgca tggggaacac gccctgaagg gtttgcaggc gcacgttgga
    22501 cgcggcaaac gcccacacga ccgaaaacac catcatcgcc gccattgccg ccagttccca
    22561 acctttttcg gcaaacagtt cggcgggcgc gtatttgccg agccactcca cgattttgcc
    22621 cataaattga aaaaccaggg cttccataat gccgatgccg gcggtcagcg cagccagggc
    22681 ggctatccat ttccgcacgc cggtcatgct gctccagata aaccgccaca gtcctttttc
    22741 aggcgttttc ggggcggctt cgggataagg gtcgattcgg gactcgaacc aggaaaatat
    22801 tttgttcaac attgttttcg atttcggtaa aacagtttca gacggcatca aacacaatgc
    22861 cgtctgaaag gaaggacaat aacgccattt tacgggaaaa gccgtcggga agacagcgcg
    22921 aggcggaaac gcagggtttc gtcagggcaa acgccgcgcc gccttcagac ggcattattt
    22981 cagcaggttt ttcaaagcaa ggcgcacgcc ttcgcccacg tccgtcccct ccggaacgcc
    23041 tttgaccgcc gcttttgctt cgcgttcgct gtaacccagc gcaagcagcg tgctgacgat
    23101 gtcttccgtt tcgtcggcgg cgggtgcggc ggcaaacagc ccgtccgtta ccgtatgcgc
    23161 gaccagcttg ccgcgcagtt ccaagaccat acgttcggcg gtttttttgc cgattcccgg
    23221 ggcggaggag aggcgtttga catcttcttc tgcaaccgcc tgcgccagct cgtctgccgt
    23281 catcgccgac aaaatgccca aagccgtttt cgcgccgatg ccgctgacct taatcagttg
    23341 gcggaatgtt ttgcgttctt ccgcagtggc aaaaccaaat aaaagatgtg cgtcttcccg
    23401 aatgataagc tgggtaaaca gttgtacgct ttcacccacg ggcggcaggt tgtagaaggt
    23461 ctgcatcgat acgtcggcct catagccgac accgttgaca tcgatgacga tttgcggagg
    23521 gtttttttca accagtttgc cggtcagtct gctgatcatg tatgccgaat cctgaagtgt
    23581 cgggtgcaaa atgccgtctg aaaccggttc gggcttcaga cggcacggat tgtatcaaat
    23641 tcagtcgtcg cggcgggagg aaatcacgcg gccggtacgg gcatcgacaa cgactttgta
    23701 ttcctgtccg tttttgacga tttcgacatc atagtgcgga cggccgttgt cgtgttcgag
    23761 atcgatgtcg gtgattttgc cgccgacacg cgccaacgct gctttttcgg cttgggcgcg
    23821 gctgatgatt ttgtcttgtt tgctgtgttg gtgtgcggcg tgtccgtggt cgtcatcgcc
    23881 gtgtccgtcg tggtgggcga gtgcgggggc ggaaatgccc atcagtgcgg ttgcggcggc
    23941 ggtcaagaga aggcgtttga agttcatgtt ttgctcctgc gaagtatctg gtggtgtttg
    24001 aaagacgtaa aggcgggaca tcaaccggcg gtcaataccg tctgaatcat accgcgcgcc
    24061 tgagcttcgg cctcggcggc gcgttcctgc gaggcaaacg gacccatttt gacgacgtat
    24121 tcgtaacggc gtttttcaat ggcgaggttc gggcttgatg tcgaagcggc gaagttttgg
    24181 gcggcttggt tcagataggc ttgtgcttcg tgttccgtac cgaaagattt caagtcgatg
    24241 aagatgtctt tgttttcggc aaccagtgcg gattggcccg ggacgatttg ttcgattttg
    24301 acgtgcgccg tcccttggct gacaaagccc aatttttgcg cggcggcttt ggatacgtcg
    24361 atgatgcggt tgccgtggaa gggaccgcgg tcgttgacgc ggacgatgac gcttttgccg
    24421 tttttggtat tggttacgcg cacatagctg gggatgggca gggttttgtg ggcggcggta
    24481 aaggcgttca tatcgtatcg ttctccgccg gaagttttgc gcccgtgaaa cctaccgccg
    24541 taccacgagg cgttgccggt ttgcgtgaat tcggcgactt ggtttttcgg cgtgtagcgt
    24601 tttccggcga ctttgtagct gcggttggcg gaggcgtgca gtttttctgc cttgaccact
    24661 gcgtcggcgg atgccgtctg aagggagtgt gtgccgaatg cggcggtgag aaggaaaagg
    24721 gtttttcggg ttaaagtcaa aacgtgttcc gttcttgagt tgaagacgaa tgggcatcat
    24781 gcccgccgga tacgttccga accgccgtac agtgcggacg gcggttcgga atgtgtccgg
    24841 ataggttttc agacggcatg aacttgcgtt caaacgccgc ctgcgtaacc gtgttgccgc
    24901 cacgcttcaa agagaatcac ggcaacggta ttggaaaggt tcatactccg actgccgggc
    24961 tgcatgggca ggcggatttt ttgcgcggcg ggcaggctgt cgaggatgtc ggcaggcagt
    25021 ccgcgcgttt ccggcccgaa cagtaaaacg tcgccttttt gaaacgcggt ttcatcgggg
    25081 cgcgccgtgc ctttggtggt cagggcgaaa atgcgcctgc ctgcgagtgc cttgaggcag
    25141 tcgtcgaagt tttcgtgcac cgtcaggctg gcgaactcgt ggtagtcgag cccggcgcgt
    25201 ttcattttgg cggaatccaa tgggaagccg agcggtttga caaggtgcaa atccgcgccg
    25261 gtattggcgc acaggcggat gatgttgccc gtgttcggcg ggatttccgg ctggtataaa
    25321 acgatggtaa acataaatat caatcactta taggcgcgta accttgccac aaggcggatg
    25381 gggtgtcaaa aaatttagtt attttttcat tggcgtgcgt gccagcgtcc agcagcagat
    25441 tcggtttgcg cccgattttt tcagcgtctt tgccaattcg tccagcgtcg cgccggtggt
    25501 aaagacatcg tcgattaaca gaatattaca gttttccggt atcggtgtgc ggatttcaaa
    25561 ggcgtttttg atgtttcgcc gccgttcgcc gcctttgagc gtgctttgcg gcgggcggtg
    25621 gtgtcggaat acggtgtgtc ggggcagtat ctgccagccg tagcgttgtg ccaacaaccc
    25681 gacgatgctt tcactttggt tgaacccgcg ttgcagcagc cgctccctgc ttagcggaac
    25741 gggcaggacg aaatcgaagc attcgtctgc aagccggtcg ggcggattct gcatcatcag
    25801 gtctgccagc ggctgcacca tgctcaaatc agccaagtgc ttcagcgcgt gtatcatatt
    25861 gctgacgggc ggttcgtaat gcagcgaagc ccacatccgg tcgaatgcgg gcggtttttt
    25921 ctgacagccg ccgcacaccg cgccgccttg aacgtgcctg aaacacaggg ggcagctgtt
    25981 tgccgcgtcg gtgcggtatg ccgccaaatc gttgcggcag ccggcgcaga tgccgtctga
    26041 aacgccggac gaaccgtggc ataatacgca acgcctgata gtgggcgcgt ctgcgatgcg
    26101 ccgccaacaa gagagaaaat ccatgcctga tgccgtcaaa aaagtttacc tgatacacgg
    26161 ttggggggcg aaccgccacg tgttcgacga tttgatgccg cgcctgcctg caacgtggcc
    26221 ggtgtccgcc gtcgatttgc ccggacacgg cgacgcgccc ttcgcgcaac ccttcgatat
    26281 tgaggcagcc gccgacgctg ttgccgcaca aatcgatacg cccgccgaca ttctcggctg
    26341 gtcgctcggc ggattggtcg cgctgtatct ggcggcgcgc catcccgaca aagtccgttc
    26401 gctctgcctg acggcgagtt tcgcacggct gacggctgac gaagactatc ccgaagggct
    26461 tgccgcgcct gcattgggca aaatggtcgg cgcgttccga acggattatg ccaaacatat
    26521 caaacagttt ctacaactcc agcttctgca cacgcctgat gcggacggaa tcataggcag
    26581 aatcctgccc gatttggcgc gctgcggcac gccctccgcc ttacaggaag ctttggacgc
    26641 ggcggaaagg gcggatgcgc ggcatttgtt ggacaagata gatgttccgg tactgctggt
    26701 gttcggtagc aaagacgcga ttacgccgcc gcgcatgggc gagtatctgc accgccgttt
    26761 gaaaggcagc aggctggttg tgatggaaaa ggcggcgcat gcgccgtttt tgagccatgc
    26821 ggaagcgttt gccgcgctgt accgcgactt tgtcgaaggg gtttgacatg aatccgcagg
    26881 acaaatgctg gcaggttcac cgccatctcg ccgaatatgc cgaccaacgc ctgacactcg
    26941 tccgcaacgc gcccaagtat atcctgcttg caggtgcgga tgcggacatc agccgcagcc
    27001 tgctggcgaa acgctatccg caggcggtat ttgaagaata cgattcccgt gcggattttt
    27061 tggcggctgc cgctgccgcc cgcaaaggcg gtttttggca aaggtttacg ggtaagggcg
    27121 tggtgcaaca ctgccaatcc ccgatcgcgc cgctgcccga agcgtgtgcc gatatgttgt
    27181 ggtcgaatct cggactgttg gcggcggaac aaatccttcc tgtgctgcac aactgggcgc
    27241 gcgccttgaa gacggacggg ctgctgtttt ttacctgctt cgggcgcgac acttttaccg
    27301 aactgaaatg ccgtctgaaa gaaaacggca ttgaaagccg cagcgtgatg tttcccgata
    27361 tgcacgactt gggcgatatg cttgctgaaa acggctttta cgaccccgtt accgatacgg
    27421 cgaagctggt gttggattac aaaaaggcgg aaacgttttg ggcggatatg gacacgctgg
    27481 gcgtttggcg ggcgatggcg tggaacgatg aaaacgccgc gcgttcgtgt gtcgggacaa
    27541 tatttgagcg ggaaggcggt ttgggcatta cgctggaaac ggtgtacgga cacgccgtga
    27601 aaaaactgat gctgccgcaa ggggagaacg tggtgcagtt ttttccgaag agatgatgtg
    27661 cagatgccgt ctgaagccgt ttccaagttt cagacggcat ttgtttgtga aaaccgacag
    27721 aactaaagga aatgccgatg tatagtg
//
LOCUS       DAXHRP010000009        26272 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.009, whole genome shotgun sequence.
ACCESSION   DAXHRP010000009 DAXHRP010000000
VERSION     DAXHRP010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26272
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.009"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            791..2239
                     /gene="gnd"
                     /locus_tag="ACFM72_000287"
     CDS             791..2239
                     /gene="gnd"
                     /locus_tag="ACFM72_000287"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HFC6256923.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLDEEDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAAWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDMAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLGNIRDAYENNPDLVFLGGDPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2302..3573
                     /gene="waaA"
                     /locus_tag="ACFM72_000288"
     CDS             2302..3573
                     /gene="waaA"
                     /locus_tag="ACFM72_000288"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HFC6256924.1"
                     /translation="MFQWLYDALWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGVLMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVTFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVRVESADAWREAVEKTLSSEGGGMQMQ
                     AHVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3614..4063
                     /locus_tag="ACFM72_000289"
     CDS             3614..4063
                     /locus_tag="ACFM72_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HFC6256925.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            4096..5070
                     /locus_tag="ACFM72_000290"
     CDS             4096..5070
                     /locus_tag="ACFM72_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFC6256926.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNSSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFKLAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLSFIGVKMLVMHWVHIPISVSLSIVFGALGASILTSLIYTKKQLDK"
     gene            5139..5214
                     /locus_tag="ACFM72_000291"
     tRNA            5139..5214
                     /locus_tag="ACFM72_000291"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5172..5174,aa:Lys,seq:ttt)
     gene            5434..6687
                     /gene="murA"
                     /locus_tag="ACFM72_000292"
     CDS             5434..6687
                     /gene="murA"
                     /locus_tag="ACFM72_000292"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HFC6256927.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMVVEGS
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYEHIEKKLGSVGAKIERVSG"
     gene            6768..7946
                     /locus_tag="ACFM72_000293"
     CDS             6768..7946
                     /locus_tag="ACFM72_000293"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HFC6256928.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADEEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(8013..8261)
                     /locus_tag="ACFM72_000294"
     CDS             complement(8013..8261)
                     /locus_tag="ACFM72_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC6256929.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8352..9269)
                     /gene="ftsX"
                     /locus_tag="ACFM72_000295"
     CDS             complement(8352..9269)
                     /gene="ftsX"
                     /locus_tag="ACFM72_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HFC6256930.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPEEIV
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(9266..9916)
                     /gene="ftsE"
                     /locus_tag="ACFM72_000296"
     CDS             complement(9266..9916)
                     /gene="ftsE"
                     /locus_tag="ACFM72_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HFC6256931.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(10111..10593)
                     /locus_tag="ACFM72_000297"
     CDS             complement(10111..10593)
                     /locus_tag="ACFM72_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HFC6256932.1"
                     /translation="MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEANEKSLTDAVKLAHSKCR
                     "
     gene            10717..11070
                     /gene="arsC"
                     /locus_tag="ACFM72_000298"
     CDS             10717..11070
                     /gene="arsC"
                     /locus_tag="ACFM72_000298"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HFC6256933.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            11067..11723
                     /locus_tag="ACFM72_000299"
     CDS             11067..11723
                     /locus_tag="ACFM72_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HFC6256934.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            11839..13233
                     /gene="gltX"
                     /locus_tag="ACFM72_000300"
     CDS             11839..13233
                     /gene="gltX"
                     /locus_tag="ACFM72_000300"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HFC6256935.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNAGNVVYQTRRFDRYKEVIAELLEKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGATLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNTLADECLYFYVKQTPTEADVQKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            13254..13649
                     /locus_tag="ACFM72_000301"
     CDS             13254..13649
                     /locus_tag="ACFM72_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256936.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDALRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            13653..14144
                     /locus_tag="ACFM72_000302"
     CDS             13653..14144
                     /locus_tag="ACFM72_000302"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC6256937.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDFGTLLGSAAVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(14268..16862)
                     /gene="mutS"
                     /locus_tag="ACFM72_000303"
     CDS             complement(14268..16862)
                     /gene="mutS"
                     /locus_tag="ACFM72_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HFC6256938.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTTLPQLQKAAKAAAALDVLSTFSALAKERNFARPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPFDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKSEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17304..18308
                     /gene="gap"
                     /locus_tag="ACFM72_000304"
     CDS             17304..18308
                     /gene="gap"
                     /locus_tag="ACFM72_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC6256939.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISSASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(18378..18497)
                     /locus_tag="ACFM72_000305"
                     /pseudo
     CDS             complement(18378..18497)
                     /locus_tag="ACFM72_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18566..19246)
                     /gene="tsaA"
                     /locus_tag="ACFM72_000306"
     CDS             complement(18566..19246)
                     /gene="tsaA"
                     /locus_tag="ACFM72_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HFC6256940.1"
                     /translation="MTYTITPIGTARSPYKQKIGIARQPGLVSAAKACIELNPKFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEIRFQIEENRATV
                     IDLSPTPL"
     gene            19360..19995
                     /locus_tag="ACFM72_000307"
     CDS             19360..19995
                     /locus_tag="ACFM72_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HFC6256941.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            20032..21000
                     /gene="waaC"
                     /locus_tag="ACFM72_000308"
     CDS             20032..21000
                     /gene="waaC"
                     /locus_tag="ACFM72_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HFC6256942.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            21227..21976
                     /locus_tag="ACFM72_000309"
     CDS             21227..21976
                     /locus_tag="ACFM72_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HFC6256943.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVAGVAELVEKLKNEAKVI"
     gene            21987..22922
                     /locus_tag="ACFM72_000310"
     CDS             21987..22922
                     /locus_tag="ACFM72_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HFC6256944.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKVDLLVAGNGASAVV
                     EFAKQVAGVKKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQVDSEKLVLTFRATAFDAAPVQGGH
                     AEAVNVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            22985..23596
                     /locus_tag="ACFM72_000311"
     CDS             22985..23596
                     /locus_tag="ACFM72_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HFC6256945.1"
                     /translation="MITTYKTITSLTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     VLERDLQLDCRLTVSLSLVNYEACVAAWKSTRQIEVNTEKPFE"
     gene            complement(23648..23965)
                     /locus_tag="ACFM72_000312"
     CDS             complement(23648..23965)
                     /locus_tag="ACFM72_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HFC6256946.1"
                     /translation="MQKRIEEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            24123..25394
                     /gene="purD"
                     /locus_tag="ACFM72_000313"
     CDS             24123..25394
                     /gene="purD"
                     /locus_tag="ACFM72_000313"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HFC6256947.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVASGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARIVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPHTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            25428..26030
                     /locus_tag="ACFM72_000314"
     CDS             25428..26030
                     /locus_tag="ACFM72_000314"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC6256948.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            26058..>26272
                     /locus_tag="ACFM72_000315"
     CDS             26058..>26272
                     /locus_tag="ACFM72_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256949.1"
                     /translation="MHTQRKNFSDSISLHDCYCTEIKVEGRNVCFNFEDGFVVPDNNP
                     NNQAGKHLKTDFSRVVLIHKNENAEDD"
BASE COUNT         6284 a         6073 c         7415 g         6500 t
ORIGIN      
        1 cggactttca gataatcttt gaatattgct gttgttctaa ggtctagatt cccgcctgcg
       61 cgggaatgac ggcggagcgg tttctgttgc tcccgataaa ttcctaaaac tcaaaatttc
      121 atcattccca ctttcgtggg aatgacggaa tgtaggttcg tgggaatgac gcggtacagg
      181 tttccgttac gtatccccat ccgaaagttt atttatacac aagcaatcca aagttatctg
      241 actgaaatat tgtgagattt acccgcaaat ctcatttttt ccaccactta tacacaaatt
      301 cggatgcgca ctctgccgat atgcagaaat aagacattcg tgccgacacc tgaccatttc
      361 cacaagttcc aaacacactt tcctctcaaa cctccacagt attccggttc ttaaagacat
      421 cggcagccat tcggtaaaga aaagcggaat gccatctgca caacaggcaa actgtccaca
      481 aaaactattc ttcatgaaaa acaatccaca ggtatgcaca aaagggaatc cgccttaccg
      541 acacccttta aaaacagtaa tcccgatgat tttaaaaata aaaaaaagtt atccacagaa
      601 aacttctcat atcaatataa tcatcgtttt attatttaaa ttttatattt tatttataag
      661 ccttcaggga aacgcacggt aaagcgtaaa ggcatctttt caaaaaatta aaaagttaag
      721 gattgttaaa caagtgtaaa tcaggtagag ttgcggtcga taaattaaat ctataacgga
      781 gcttcctgca atgaaaggcg atattggcgt aatcggtttg gcggttatgg ggcaaaacct
      841 gattttgaat atgaacgatt gcggatttaa ggttgtcgcc tacaaccgaa caatcggtaa
      901 ggtggacgaa tttttaaacg gcgcggctaa gggaacggat attgtcggcg cgtattccct
      961 gcaagacttg gtcgataagc tggcaaaacc gagaaaaatc atgatgatgg ttcgcgcagg
     1021 ttcggtcgtc gacgacttta tcgaacaact gctgcccctg ttggacgagg aagacatcat
     1081 tatcgacggc ggcaatgcca attaccccga cacgacacgg cggacacatt accttgccga
     1141 aaaagggatt ttgtttgtcg gcgcgggcgt atctggcggc gaagaaggcg cgcggcacgg
     1201 cccgtccatt atgccgggcg gggataagcg cgcttgggaa gccgtcaagc cgatttttca
     1261 ggcgattgcc gccaaaacgc cgcagggcga accgtgttgt gactgggtcg gcagggacgg
     1321 cgcggggcat tttgtcaaaa tggtgcataa cggcatcgaa tacggcgata tgcagttgat
     1381 ttgcgaagcg taccagttta tgaaagacgg cttggggctg tcttacgacg aaatgcaccg
     1441 cgtgtttgcc gcgtggaaca aaaccgagct ggattcttat ctgattgaaa tcacagcggc
     1501 aattttgggc tataaggacg aaggcggcga accgctggtc gagaaaatcc tcgatatggc
     1561 agggcaaaaa ggcacgggca agtggacggg catcaatgct ttggatttgg gtattccgct
     1621 gacgctgatt tccgaagccg tattcgcccg ctgcgtttcg tcgttcaaag aacagcgcgt
     1681 gcagaccggc aagctgttcg cccgaaccgt tacgcccgtc gaaggcggca aacaagaatg
     1741 ggtcgaggcg ttgagacagg ccctgcttgc ctccaaaatc atttcctacg cacaaggctt
     1801 catgctgatc cgcgaagcgg gcgaaagtta cggctgggat ttggactacg gcaacactgc
     1861 gctgctgtgg cgcgaggggt gcatcatccg cagcgcgttt ttgggcaata tccgcgacgc
     1921 gtatgaaaac aatcccgatt tggtgttctt gggtggggat ccgtatttca aaaatatttt
     1981 ggaaaactgc ctgccggcat ggcgcaaggt ggttgccaag gcggtcgaat gcggcatccc
     2041 tatgccctgc atggcttcgg cgattacgtt cttggacggc tacacgaccg aacgtctgcc
     2101 tgccaacctc ttgcaggcac agcgcgacta cttcggcgcg cacacgtacg aacgcaccga
     2161 caaaccgcgc ggcgagtttt tccataccaa ctggacgggc aagggcggag ataccgcttc
     2221 gacaacctac gatatttgat tccgttgccg aaatgccgtc cgaaccgttc ggacggcatt
     2281 tgttttgcag gaaatagaaa gatgttccaa tggctttatg atgcattgtg gctgcttgcg
     2341 ccgatatgga tacggcgtta tttggacaaa cgctccggaa gtgccccggc atatcgggcg
     2401 catcgggacg agcgtttcgg caagccgtat ccgaatcccg ttaccggcgc ggtttggata
     2461 cacgccgttt cggtcggaga aacgcgtgcc gcccagccct tgatacgcga gttgcggcag
     2521 cgttttcccg atgcgccgct gctgatgacg cagatgaccc cgacgggacg ggaaaccgcg
     2581 caagttctgt ttcctgatgc acaatgccgc tatcttccgt atgacaaaaa aacgtgggta
     2641 cggcagtttt tgcgcgaaca ccgcccgatg ttcggcgtat tgatggaaac ggaaatctgg
     2701 cccaacctaa tgaaggaatg ccggcgcgcg ggtgtgccgc tgtttttggc gaatgcgcgg
     2761 ctgtcggaaa aatcgttgaa cggttatctg aaagtccgcc gcctgatccg tcctgccgcc
     2821 gcttcgctga cgggttgtct ggcgcagacg gaggcggatg cggcgcggtt ggcgaaattg
     2881 ggcgcggcat ccgtgcaggt gtgcggcaat accaaatacg acctgatgcc gtcggaacag
     2941 atgaaaacgc tggcggggca gtttgaaaaa cgcatcggag gccggccggt tgccgtgtgc
     3001 ggcagcacgc gcgtttatcg gggcgaagac gaggcggaaa aactgctggc ggcgtggcaa
     3061 caatatcgcg gcgatgcgct gctggtcgtc gtgccgcgcc atcccgagca ttttcagacg
     3121 gtatttgaaa cggcaaaacg cttcgggttt aaggttcagc ggcgcagcga cggtttgccg
     3181 gtcgaacctg atacgcaggt gtggataggc gacagtatgg gcgagctgta tgcgtattac
     3241 ctgtgcgccg atgtcacttt tgtcggcggc agtctggtcg attcgggctg tcagaacatt
     3301 atcgaaccgc tttcctgcgg cgttccgacg atattcggct tttcaaccta caatttttcc
     3361 gaagcctgcc ggcacgcctt ggcatcgggg gcggcggttc gggttgagtc ggcggacgcg
     3421 tggcgggaag ccgttgaaaa aaccttatcg tccgaggggg gcggaatgca gatgcaggcg
     3481 cacgtggacg gctttatcgc acaacatcgc ggagcgggcg cgagaatcgc cgaggcggta
     3541 cgggaagcgg tatgcggaca tcggggacga tagtgataca atccgtatcc gagttttccg
     3601 gttggagcat cgtatgagta tttatgccgt cgcgcacatc gtccacctgt attgcgccat
     3661 tgcctttgtc ggcggcgtgt tttttgaagt gctggttttg tccgtcctgc atacgggacg
     3721 ggtgtcgtgc gaggcgcggc gcgaagtgga aaaggcaatg tcttaccgcg ccgtcagggt
     3781 gatgccgttt gtggtcggac tgctgttcgc cagcggcatc gtgatggcgg caaaccgcta
     3841 tctttctata ttgggcgaac cgtttgccac ttccttcggt acgatgctga cgctgaaaat
     3901 cctgttggcg ttcagcgtgt tggcgcactt cgccatcgcc gtcgtcaaaa tggcgcgttc
     3961 cacactgacc gtcggctggt cgaaatacat acacaccgtc gtctttaccc atatgctgct
     4021 gattgtcttt ttggcaaaag cgatgtttta tatcagctgg taacacaact acatttcaaa
     4081 tcaggagatt gaaccatgac agaatatccc ggcatcgggt cgccgttgtt ttacggcgtt
     4141 ttttttgcgg cagtgctggt catgattgcc ttggatatgt tttcgctgaa gaaaaacagc
     4201 agccataaag tcggcgtcaa agaagccttg gcatggagcg gcttgtgggt tgccgtatcc
     4261 tgcctgttcg caggctggct gtatttcaaa ctcgccggca atcccggcta cggcgcggca
     4321 gtcgcaaaag aaaaagtatt ggaattcttt accggctaca ttttggaaaa atcgttggca
     4381 gtcgataata ttttcgtgtt cctgatgata ttcggctact tcaaagtcgc accgcagttt
     4441 cagcaccgcg tgctgctgta cggcgtattg ggcgcattgg tattgcgcac cgtcatgatt
     4501 ttcgtcggcg cggcactggt tcggcagttc gagtggattc tgtatctgtt cggcgcgttc
     4561 ctgctctata ccggcataca catgatgaag cccgagggcg atgaggaaga ggatttggca
     4621 aacagcaggc tgctgaatgc cgtcaagaaa gtcgttccgg tcggcacgga atttcacggc
     4681 gagaaatttt ttaccgtcga aaacggcaaa aaaatcgcca cgccgctgtt tttggtgctg
     4741 gtcatgattg aattgagcga tgtcgtgttt gctgtggaca gtattcccgc cgtctttgcc
     4801 gttaccaccg atccgtttat cgtgctgact tccaatattt tcgctatttt gggtttgcgg
     4861 gcgatgtatt tcctactggc ggatgtggcg gaacgcttta tcttcctgaa atacggcttg
     4921 gcattcgtgt tgagttttat cggtgtgaaa atgctggtaa tgcattgggt gcatatcccg
     4981 atttccgttt cactgtcgat cgtcttcggc gcgttgggtg catcgatact gacctcgtta
     5041 atttatacga aaaaacagct tgataaataa aatgccgtat gagcgccgac aaaatggttg
     5101 acagcatcag gcttgatgta tagaatttcg agcttatcgg gtcgttagct cagtcggtag
     5161 agcagcggac ttttaatccg ttggtcgagc gttcgaatcg ctcacgaccc accagataaa
     5221 acaaaaaaag ctgagttttc aaaactcggc tttttttgtc tgccgacaat ccttgttcgg
     5281 aaagcgcggc atttcgtcaa attctttggt gcggcttccg tatttttccc gaaaatccct
     5341 tataattccg cctctgtaac cttcatcggg tgatgcttta tgcgttgtcc cgagtattga
     5401 aatattacaa gtacccacca ggaaagaaca aacgtggaca aactgaaaat ctccgcaaac
     5461 ggcccgctca acggggaaat aacggtctcg ggcgcgaaaa acgcggcatt gccgctgatg
     5521 tgcgcgggtt tgctgacatc gggtacgttg cgcctgaaaa acgtccctat gctggcagat
     5581 gtgaaaacca cgcaaaagct gcttcagggg atgggcgcgc gcgtcctgac tgacaatatc
     5641 agcgaatttg aaatcaacgg cggcacggta aacaatacct gcgcccctta cgaattggtt
     5701 cggacgatgc gtgcttcgat tttggtgctt ggtccgacgc tggcgcgttt cggcgaggcg
     5761 caagtcagcc tgccgggcgg ctgcgccatc ggttcgcgcc ccgtcgatca gcatttgaaa
     5821 ggcttggaag cgatgggtgc ggaaatcgtc atcgaacacg gttacgtcaa ggccaaaggc
     5881 aaactcaaag gtacgcgcgt ggcgatggat gtcgttaccg tcggcggcac ggaaaacctg
     5941 ctgatggcgg cgacgctggc ggaaggtacg acggttttgg aaaactgcgc catcgagcct
     6001 gaagtggtcg atttggcgga atgcctggtc aaaatgggcg cgaaaatcag cggcatcggt
     6061 acgtccacga tggttgtgga aggctcggac gagctgcacg gctgcgaaca cagcgtcgtc
     6121 cccgaccgga ttgaagcagg gacgttcctg tgcgcggtgg cgataaccgg cggcagggtg
     6181 gttttgcgga atgccgcgcc gaaaacgatg gaagtggtgt tggacaaact ggttgaggca
     6241 ggtgcggtga ttgaggcggg cgacgattgg atcgccatcg atatgcggca gcgtccgaag
     6301 gcggtggaca tccgtacggt cgtccacccc ggcttcccca cggatatgca ggcgcagttt
     6361 atggcattga atgccgtggc ggagggaagc tgccgcgtgg tggaaacgat ttttgaaaac
     6421 cgctttatgc acgtccccga gttgaaccgg atgggggcga acatcacaac cgagggcaat
     6481 acggcatttg tgcagggtgt ggaacagctt tccggcgcgg tcgtcaaggc gacggatttg
     6541 cgtgcgtccg caagcctcgt tatcgccggt ttggcggcgc gaggcgaaac cgtggtcgaa
     6601 cagatttacc acttggatcg cggttatgaa catattgaaa aaaaactcgg cagcgtcggc
     6661 gcgaaaatcg agcgcgtatc cggctgatcg ggttgcgatg ccgtctgaag ccttcagacg
     6721 gcatcaattg tttccgtatc gcaaacactg attgaaaagg actgattatg gcatttttaa
     6781 aactgaccga acaaaacgtg cagggcaaaa ccgtcctcat ccgcgccgat atgaacgtgc
     6841 cgttcaaaga cggcaaaatc agcgacgaca cccgtatccg cgcctcgctc gcgtccatcc
     6901 aatactgcat ggacaacggc gcatccgtta tcgtgatgac ccacttgggc cgcccgaccg
     6961 aaggcgagtt ccaccccgaa gacgacgttg cgcccgttgc cgcgcatttg ggcggcctgt
     7021 tgggcaaaaa cgtgaaagta ttgaacgact ggcgcgaaaa caaaccggct ttgaacgcgg
     7081 gcgatgtcgt gatgctgcaa aacgtgcgta tcaacaaagg cgagaagaaa aacgatttgg
     7141 aactgggcaa agcctacgct tctttgtgcg acgtgttcgt caatgacgcg ttcggcaccg
     7201 cgcaccgcgc ccaagcctcg accgaagccg tcgcccaagc cgctcccgtt gcctgcgccg
     7261 gcgtattgat ggcgggcgaa ctcgacgctt tgggcaaagc cttgaaacag cccgcgcgcc
     7321 cgatggttgc catcgttgcc ggcagcaaag tgtccaccaa gctgaccatc ctcgaatcgc
     7381 tggcggacaa agtcgaccaa ctcatcgtcg gcggcggtat cgccaacacc ttcctgttgg
     7441 cggaaggtaa agccatcggc aaatctttgg cggaacacga tttggtggaa gaatccaaaa
     7501 aaattatggc aaaaatggcg gccaaaggcg gttctgtgcc gctgccgacc gatgtcgtcg
     7561 ttgccaaagc ctttgccgct gatgaggaag cggtggtaaa agacattgcc gacgttgccg
     7621 aagacgagat gattttggac atcggcccga aatctgccgc cgcgcttgcc gatttgctta
     7681 aagccgccgg tacggtcgta tggaacgggc cggtcggcgt gtttgagttt gaccagttcg
     7741 caggcggtac gaaagccctt gccgaagcca ttgcccaaag caaagcgttc tcgattgcgg
     7801 gcggcggcga cacgctggcg gcgattgcca aattcggcgt taccgaacaa atcggctaca
     7861 tctccaccgg aggcggtgcg ttccttgagt tcttggaagg caaagagctg cctgccgtag
     7921 ccgctttgga aaaacgcggc gcgtaagcgg tttgatataa aaaatgccgt ctgaaacgtt
     7981 gtgctgtttc tgacggcatt tttgtgtggc ggttattgtg ctttggctgc ccattccgcc
     8041 ggagtggcgg caaccgaaat ggaaagtgcg tgcagttcgt tactttccag ttgggctttg
     8101 agtccgtctt taatcaggcg gtggcgcgcg aggcgtgcct tgccttcaaa ttctgatgaa
     8161 acgatgacgg cgaaaaaatg gtgtccgtcg ccttctactt cgatatgttc gcattttgcc
     8221 acgccttcaa tcatggcttt tacttgttcc gaggtcagca tggtaggttc cttgttggaa
     8281 aaatgcgcca ttatactggc aaattgaaat gccgtctgaa aacgggttcg gacggcattt
     8341 ttgacggtgt tttatttttt ggctttgaag ccgagcaggt gctgggtggt ggcaagccac
     8401 gcgccgaata cgcccaacgc gatgacgaag ccgaacacca gcacgatttc ttcagggtaa
     8461 aagaaacgcc agccgatgtt caagccgtag ggtttgaaaa tggcatcgac caatgggcgc
     8521 acggcagaga gcagccaacc gcaaagcccc aagctgacgg cggcggaaag gatgctctgc
     8581 cacattgcct gataaaggaa ggggcggcgg ataaacgacg cgggcgcgcc caagagtttg
     8641 gtgatttcga tttcttcttt tcggctgagg atttgtaggc ggatggtgtt gtgcgcgaca
     8701 aggacgaacg ccatccccag cgtcagggaa agaaaccata aaattttgcg gatgaactcg
     8761 ttgatttggt acagcgtttg cacccattcg gtatccatag acgcggattc gaccataggc
     8821 agtttggtaa tgtctcggta gattgcctgc atttgggcgg gcgtggttgc cgggtcgggg
     8881 gtaacgataa agacatccgg cagggggttg ccgtcaagca tggaaatcag attttggtcg
     8941 agattggact gtaattcttc cagaccgtct tctttgccga tgaagcggat gttgtcgagc
     9001 cgtttgtcgc gcgccagcag gctgcgcacg gtatcgctgt cgctttgtgc ggcggcggtt
     9061 tccatataga ttgtgatttg cggcgactcg ttgagtttgc ccaacacgct ttgcccgctt
     9121 tggatgccca aatacataaa cagcggcagg gtcatggcga cggcgagcat tatgagggta
     9181 agcagtgtgc cgaaaggttg gcgcagaagc tgtttgagcg cggtgcgcgc ggattcgacg
     9241 tgcagcgaga ggtagtggat gatgctcatg cgagtcgtcc tttcgagagg cgcaggatgc
     9301 ggtgtccgta gtccgccatc agggtttcgt catgtgcggc gacgatgacg gttgttcccg
     9361 cttcgtggaa ggttttgaac aattccataa tatcgagcgc gtaggcgcgg tcgaggttgg
     9421 cggagggttc gtcggcaatc agcaggccgg gctggtgaac gacggcgcgg gcgatgcaca
     9481 ggcgttgttg ttcaccgccg gagagggtta cgggatcgtc caattctcgt cctttcaggc
     9541 cgactttttc gatggcgatg cgggcacgct cttcggcttt gcgcggcgga tagccgataa
     9601 tccgaagcgg caggatgacg ttttgcagga cgttgcggtc gtagaggatt ttgtggtctt
     9661 ggaacacgat gccgatgtgt tggcgcataa agccgatttg gttgtcggac aatgtgccga
     9721 ggtcctgccc gttaaacagg attttgcccc tgcttggttt ggtaatgccc gaaatcagct
     9781 tgaggacggt ggatttgccc gaaccggagt gtcccgcgat aaatatcatt tcgcctttgt
     9841 tgatttggaa gctgacgttt ttcagggctt caaaaccgcc gggataggtt ttggaaactt
     9901 gttcgaaacg gatcatagga ggtcctgtaa ggaatgggcg gcatatcgtt tcgggcggtt
     9961 gcgtccgcag ggatatgccg tctgaacaat aggtaagaca gtgccgatta taaagattcc
    10021 gcctgttttt agatagtgga taagtttggc ggatatgaag gtcgggcggg aaaaatgccg
    10081 tctgaagcgg attcagacgg catccggcgt ttaacggcat tttgaatggg cgagtttgac
    10141 ggcgtcggtc aggctttttt cgtttgcctc ccctgtaatg gtctgcctgt atccgcattt
    10201 cggtgcttcg acgacggtaa agggcagtac gccgacagtg tttccgtagg ttttcataaa
    10261 gtttcggctg ttcgccccgg tgtaacgcca aatcgggtag gaaacaggag tttgtttgag
    10321 gaagttgccg atattgtcgg atgtgtcgag cgcgatgccg accatatcga cgctgccttt
    10381 tttctgcgct ttgtaccatt tggacatggc aggcatctct tttcggcacg ggccgcacca
    10441 ggttgcccaa aggttgacga tgcgtacggg ggctttgagt gattgcaggc tttgcggggt
    10501 gttgtctttc catccggcca gttcgtctgc cgaggcggta tgtgcggcaa atgtggcggc
    10561 aagggtgatt gcggcaagat tcaagtattt catcgttttg tcctttgtat gtcgattcgg
    10621 gtattgtaaa ccgtttggta cggttgtagg cgggatattg agtaaaaccc tgtgtaagcc
    10681 gataataagg ggattgtcga gaagtaagga aatgtcatgt ctgaaatcaa aattttccac
    10741 aacccccgtt gcagcaaatc gcgtgccgcc ttgtccctat tggaagaacg cggcattgct
    10801 gccgaagtgg tcaaatattt ggatacgccg cccgacttgt ccgaattgaa ggatattttc
    10861 aacaaattgg gcttggcatc ggcgcgcggg atgatgcgcg tgaaagatga tttgtataag
    10921 gaattgggtt tggacaaccc caatttggac aatgacgcgc tgctgcgtgc catcgccgat
    10981 catcccgccc tgttggagcg tccgattgtt ttggcgaacg gtaaggcggc tgtcggcagg
    11041 ccgttggaaa atatcgaagc ggtattgtga acaaacggct gttttgcagc cgcaacggct
    11101 tgcgctatta cctgttgggc ggtttctgtt tgagtgtttt tccgtttttg ctggtgtttg
    11161 cctcatccgt ttgggcggtt tatcggacgg gcgggcaggt tttgccgccg tatgtccggg
    11221 cggatgccgc gctggtgttg ggtgccgccg cgtgggacaa acgcccttct ccggtttttc
    11281 gggaacgcat caaccacgcc atcgcgcttt atcagagccg cagggtaggc aaaatcgtgt
    11341 ttacgggagg gcgaaccaaa aaaggctata tgaccgaagc cgaggtcggg cggcggtacg
    11401 cgctcaaaca gggggttccg gcgcgcaaca tcctgtttga aaacacttcg cgcaacactt
    11461 atgaaaacct gaacaacatc cgtccggttt tgcgtgccaa cggtattgcc agcgtggtga
    11521 ttgtcagcga tccctaccat ttggcgcggg cggcggaaat ggcggaggat ttgggtgtcc
    11581 gcgtttatat gtctgccacc ccgaccacgc ggtttgatgc gggaaataag aaaaaaatct
    11641 ttatgctgca agagggatat gcgttgtccc tctaccgttt ggaaaaatgg ggcagccgct
    11701 ttttgggatg gctgtctgat tgaagcggta gaaaatgccg tctgaaactt atccgcaggc
    11761 agggttcgga cggcattttt aatgcccaag cacggtaaaa acagtaaaat aagccgtttt
    11821 aaagattttg gagccatcat gaccgtcaaa acccgtttcg cccccagccc aaccggctac
    11881 ctgcacatcg gcggcgtacg caccgccctg ttttcttggg cgtttgcccg ccatcataaa
    11941 ggcgaattct tattgcgcat cgaagacacc gacttggcgc gctctactgc cgaatccgtc
    12001 aacatcatcc tcgacggcat gaaatgggtc ggactcgatt acgacaacgc cggcaacgtc
    12061 gtgtaccaaa cccgccgttt cgaccgctat aaagaagtca tcgccgaact tttagaaaaa
    12121 ggcgatgcct actactgcta ttgcagcaaa gaagagttgg aagccatgcg cgagaaagcc
    12181 gaaaaagaag gcacggcgac ttacgaccgc cgctggcggc cggaagcagg caaaaccctg
    12241 cccgaaatcc ctgccggcgt gcaacccgtc gtccgcttca aaacgccttt ggatggcgta
    12301 accaagtgga cggacttggt caaaggcgaa atctccatcc ccaacgaagc actcgacgac
    12361 ctgattatcg cccgcgccga cggcacgccg acctacaact tctgcgttgt cgtggacgac
    12421 tacgacatgg gcgttaccca cgttatccgg ggcgacgacc atgtgaacaa caccccgaaa
    12481 caaatcaaca tcttaaaagc catcggcgct accctgcctg aatacggcca cctgccgatg
    12541 attcttaacg aacaaggcaa aaaaatctcc aaacgcagcg gcgataccgt tgccattacc
    12601 gatttcggcg cgatgggcat cctgcccgaa gccatgctca actatctggc acgtttgggc
    12661 tgggcgcacg gcgacgatga gttcttcacg atggaacaat ttatcgaatg gtttgatttg
    12721 aaagacgttt ctccatctcc aagccgcatg gatttgaaga aactctactg gatcaacggc
    12781 gaacacatca aaatcacgcc caacggcaaa ctcgccgaac tcgtcaaacc gcgtctcgct
    12841 ctgcgcgata tccatgaaac tgaaaaacct gcattggaag acgtgttggc actggtcaaa
    12901 gaccgcgccc aagacctgaa cacacttgcc gacgagtgcc tctacttcta cgtcaaacaa
    12961 acgcctactg aagcggacgt gcagaaacac tgggacgatg aagccgccgc ccgtatgctg
    13021 cgctttgccg aacgcctcga agggctggaa gactggaatg ccgaagccat ccacgacctc
    13081 ttcaaaccct tctgcgacga agaaggcatt aaaatgggca aactcggcat gcccctgcgc
    13141 cttgccgtct gcggtacggc gaaaaccccc agcgtcgatg ctgtgttggc attaatcggc
    13201 aaagaagaag tgttgaaacg catccgcgct taagttatcc acaggcgtgg gcgatgccgt
    13261 ctgatgtcgg aatgcggctt cagacagcat tcaaacggaa gttgaacatg aaaaaaatat
    13321 tgtattttct gatgtttgtt ttttctacaa gcgtatgggc cggggatgcg gaagacaatc
    13381 tgctcagcat ccaatccggc tatcgtgcct tactgcaaaa acaaaacaat ctggacggaa
    13441 aaatcatcgg gatgcagtcg gatttggaag atgcgctccg gcgtttgcag acggctcaag
    13501 cagacatcgc ccgtttggaa gcggaaattc ctgcagcaat ggcgcaaaaa gcccggcagg
    13561 ctgaagagct gaggcaaatc ggagtgcgtt tggaccatgc ttggaatgcg gtttacggcg
    13621 cagggggaac gaaagcgtcg gggaattgac cgatgaattc cctctttgta gacaatactg
    13681 ttttcattac acggctgaaa gccgggcata tcggcaggtt ggttcaggcg ttgtttgagg
    13741 agtggcacgg atttgaaccg tggtcttctg tggataagat tcatgcctat tacggcaggt
    13801 gtttgaagga tgacgaactg ccgctggcat ttgcggctgt ggatgatttc ggaaccctgt
    13861 tgggttcggc tgcggtcaag cggcatgata tggaaagttt tccacagtat gaatattggt
    13921 tgggtgatgt ctttgtttta cctgaatatc gcggaaaagg cattggcagg aggctggtcg
    13981 cccactgcat aggcgcagcg cgttcgctgg ggataaagtt cttgtatctt tatacgcctg
    14041 atgtgcaaat attttatgaa tcattcggct gggcggttgt cgggcgacat ttccataacg
    14101 gtgaatgggt tacggttatg cgtttggata tggataaggt ttaagccgaa tggacaaatg
    14161 ccgtctgagc tgttcggacg gcatttttta tgtttggaaa tttcctgtca gataatgttt
    14221 atccacagat ttttccatat ggtttgatgc tgttccgaca acggaaatta agatacggat
    14281 ttgcacaaat ctttcagacg gtacagttct gacaatgctt cgcgcggggt caggctgtcg
    14341 ggatcgagtt tttccaaggc tgctgccaat ataccttcaa aatgtttttc ctctgattta
    14401 tccacaaagt tgcccacatt cggttcatct cctttttcag acggcatggt actgaaaata
    14461 tccagttggg gacggttcgc ggcggcttgg ttttccagtc cgttcaaatg cttttgggcg
    14521 gatttcaatg cgcgtacagg caggccggcg agtttggcga cggcaatgcc gtagctttta
    14581 ccggcgggac ccggttggat ttggtgcagg aaaacgatgt cctgtccctg ttcgagcgcg
    14641 gaaaggtgca tattgacggc ggcggcgtgg gcttcgggca ggtaggtcag ctcgaaatag
    14701 tgggtagcaa acaggctgaa ggatttgttt ttttgcagca ggtgttcggc aacggcgtgc
    14761 gcgagggcga ggccgtcgaa agtggaagta ccacgtccga cttcgtccat taaaacaagg
    14821 ctttgttcgg tggcgtgatg caggatgtag gcggtttcgc tcatttcgac catgaaagtg
    14881 gagcggttgg aggcgaggtc gtccgatgcg ccgatgcggg tgaagatttg atcgaagggc
    14941 ccgattgtgg cggcatcggc aggcacaaaa cagccggtgt gtgccaataa aacaatcagc
    15001 gcgacttggc gcatgtaggt ggatttgccg cccatattgg ggccggtgag cagcatgagg
    15061 cggtgtttgt ggtcaaggtc ggtgtggttg gcggtgaagt ggcgtacctg ctgttcgaca
    15121 acgggatggc ggccgttttc gatgtggata accggatagt cggcaaactc ggggcgggcg
    15181 aagttccgct cttttgccaa ggctgaaaat gtggacaata cgtccagcgc ggcggcggct
    15241 ttggcggctt tttgaagctg cggcaatgtc gtctgaaggt ttttcaatac gccgtcaaag
    15301 agttgttttt ctaaggcgag ggcttgctct tgagcagtca gcactttgtc ttcaaaggct
    15361 ttcaactccg gcgtgatgaa gcgttcggcg tttttgaggg tttgccggcg ttggtagtcg
    15421 gcaggtgctt gttcggcttg ggttttggac aattcaatgt aaaagccgtg aacgcggttg
    15481 aactcgactt tgagtgtgga caaaccggta cgttcgcgtt ccttggcttc caaatccagc
    15541 aaaaattcgt cgccatggtt ttgaatgcgg cgcaattcgt ccagttcggg atgaaaaccg
    15601 tggttgatga cattgccgtc tttcagccag acggaaggtt cgggcaaaat ggcttggcgg
    15661 agctgttcgg ctgtggatag gttttccggg aaaacggctt tgagggtttc caacaggctg
    15721 ctgccgtttg cggacaagtc gatttgtgcc aactcgaaca gactgtcgcg taaagatgcc
    15781 aaatcgcgcg ggcgggcgtt gccgacggcg atgcgggcag caatgcgttc aatgtccgca
    15841 atgtttttca gacggcattg gaggggtttg tattggcttt ccagcgcggc aacggcttct
    15901 tggcgcgctc ggatgtgggc gcggttgcgt aaagggtggt gcagccagag agccaagagg
    15961 cggctgccca tatgggtagc gcaaaggtcg agcgtggaca tcagggtcgg cgattttttg
    16021 ccggagaggg tttgcgtgat ttcgagattg cggcgcgtgg cggcgtccat gccgatatat
    16081 tggctgtcgg tttcgagcga caggccgtcc aaatgttgcg gcatcaggtt ttgcgtcagg
    16141 cggatatagt tcaacagcgc acctgccgcg ccaatcgcaa cggcgtgttc tttgccgtcc
    16201 aaaccgaagc cgcgcaaatc ctggcagccg aaatattccg tcagcagttt ttcccccgcg
    16261 tcggcggcaa actgccacgc gttcaggcgc gtaacacccg atgccgtctg aagttgcggt
    16321 gcgtttttac tgtccggcaa cagaatttcc gccgcctgca ggcgcgccag ttcgtcgtcc
    16381 aatttatcca cagttgtcag cttggttttg aattcgccgc tttgcagcga tgcccacgcc
    16441 aaaccgatgt attttttgtc gggggacacg gcaacgatac ggttggtttc cttgtcttcc
    16501 agcaatgcgg aatcggtcag cgtgccgggc gttacgatgc gcacgacttt gcgctccaca
    16561 ggccctttgc ccgcgccgac ttcgccgacc tgttcgcaaa tcgccacgct tttgcccaac
    16621 ttgaccaggc gcgccagata ttgttcggcg gcgtgaaacg gcacgcctgc cattttgacc
    16681 ggctcgccat ccacctgtcc gcgcgtggtc agggtaatat ccaaaagttt tgccgcttct
    16741 accgcatcgt cgaaaaacat ctcgtaaaaa tcgcccatac ggtaaaacac cagtttgtcg
    16801 gtatgttgcg ctttgatgcc gaggtattgc tgcatcattg gggaaacggc ggatttggac
    16861 atggggctgc cttatcatta ggaaaacggt attgtagcaa aaggttttgt cttcgacgga
    16921 atgagactga ccgtaagcct gtcaataagg ttgtggagac aactaggaaa acagcaaagt
    16981 tatccacaga aatattatta agtcaaaaaa catccacgct tatctgtctt atacagcaag
    17041 tcttaaactc aaacttattt gacaaaaaga taatgaaaat attggatatt tgctacttac
    17101 gcacaagcag gttggcaatc atcaaaatca tcattaaaat ttaaattcaa atattgatgg
    17161 taaaggtttt ggaaatctgt gcaaacagca aaattcatct atatcaaata agcgtcaagt
    17221 agttagatgt aatagtggaa tgtaacttta tttcagaata caatgcaggc atcggacttt
    17281 atttcacaac ctggagacaa aatatgagca ttaaagtagc gattaacggt ttcggccgca
    17341 tcggccgcct cgcattgcgt caaattgaaa aagcccacga catcgaagtc gtcgccgtca
    17401 acgacctgac ccctgccgaa atgctgctgc accttttcaa atacgacagc acgcaaggcc
    17461 gtttccaagg tactgccgaa ttaaaagacg atgccatcgt ggtaaacggc aaagaaatca
    17521 aagtttttgc caatccgaat cccgaagaat tgccttgggg cgagttgggt gtggatgtcg
    17581 tcctcgaatg taccggcttc tttaccaaca aaaccaaagc cgaagcccac atccgtgccg
    17641 gcgcgcgcaa agttgtgatt tccgcacctg gcggcaatga tgtgaaaacc gtcgtatatg
    17701 gcgtaaacca agacattttg gacggcagcg aaaccgtcat ttcctccgct tcctgcacca
    17761 ccaactgcct tgccccgatg gcggcagtcc tgcaaaaaga gttcggcgta gtcgaaggtc
    17821 tgatgaccac catccacgcc tacaccggcg accaaaacac ccttgacgcg ccgcaccgca
    17881 aaggcgattt gcgccgcgcc cgagccgccg cgctcaacat cgtgcccaac agcaccggtg
    17941 ccgccaaggc catcggtctg gttatccccg aattgaacgg caaactcgac ggctccgccc
    18001 aacgcgtccc tgttgccacc ggctcgctga ccgaattggt ttccgtcctc gaacgccctg
    18061 taaccaaaga agaaatcaac gccgcgatga aagccgccgc cagcgaatct tacggctaca
    18121 acgaagatca aatcgtttct tccgacgttg tcggcatcga atacggctcg ctctttgacg
    18181 caacccaaac ccgcgtgatg accgtgggcg gcaaacaact ggtgaaaacc gttgcctggt
    18241 acgacaacga aatgtcctac acctgccaac tcgtccgcac tttggaatac ttcgcaggca
    18301 aaatctaagg cttgaacaaa cctgtggata agtaaatgcc gtctgaacac attgcgttca
    18361 gacggcattg tttatctgta tagtggatta aatttaaacc agtacggcgt tacctcgcct
    18421 tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgatttaa atttaatccg
    18481 ctataacttg atattgcggc ttatggcgaa caaacaacag ccgtttgttc aactgctatg
    18541 cggcaaaacc ggatttttgc ccgatttaaa gcggggttgg ggaaagatca ataacggttg
    18601 cacggttttc ctcgatttga aatctgattt cgtaatccgc aatattcatc acataaatcc
    18661 gttcgggaat attctgatag gcggggcgcg gatcttgggc aatgctttgg ctgataaggt
    18721 ttttggtgtt tgcagataaa ttttccgcgc cgatgttttc ctgccaaacg acttccaact
    18781 ctacgggttt gccgctgacg aaaccggatg cggcatcggg tttggattcg acaaagggga
    18841 tataaggttt gatgtccaca atcggtgtgc cgtccagcag gtctgcgccg ctgcaataga
    18901 ggcggacggg tttgccggtt tcgatgcgtt cgagtttcag gagcgagagt ccgagatggt
    18961 tggggcggtg ggggctgcgc gtggcgaaca cgcccatttt ttgtttgccg ccgagccgtg
    19021 gcgggcgcac catttgcgcc cagccttcat ccaatacgcc gtgaaaaata aaacttatcc
    19081 acacataatc gaaatcttcc agcccgcgca cgctgtctgc ggtgaatttg ggattcagct
    19141 cgatgcaggc ttttgcggcg gagaccaaac cgggctggcg ggcgatgccg attttctgtt
    19201 tgtagggcga gcgggcggtg ccgatggggg taatggtata agtcataagg ttgtggataa
    19261 gttttttgga aaaaccttat cttatcacaa tcggttttac cgcttttggg cagtaatttg
    19321 ttataataca gggcatttta atcgcgttga aataatgaga tgattgtttc cattgatgtt
    19381 gatgcacaaa aaacgtttac gccactgtgt cctgacgaac tgcccgtgaa cgaggggcat
    19441 ttgattgtcg aggagttgaa tgcgcaagcc gctttggcgg atttgcgcgt gatgacgaaa
    19501 gatgcgcatc atatggtagc gaaatggctt gtggataacc ctgttgatat gttgaagccg
    19561 acaggtttgc ctgatgcgga tttgacttgg gtggctcatg cgatggtcgg tacgcgcggc
    19621 tatgaattat tggacgggct gccttctgct aaagaatacg attattgcgt ttggaaaggt
    19681 gttgatcctg aattgcatcc ttacggcgcg tgttttcacg atattgagga aaaactaagc
    19741 acagggctga ttgaatggct gcgttgtcaa aatacggata cggttattat cggtgggtta
    19801 gctacggatt attgtgttaa aacaacggtt ttgcagttac tcaaaggcgg tcgttggcag
    19861 gttgtcgtca atgaagcggc ttgtcggggt attgcgccgg aaaccatcga aacagcatgg
    19921 caggaaatgc attctgctgg ggcaatcatc ttaaaaaacg ctgatgaaat aaataaatat
    19981 attaataatc aataagttaa aattgtttca cgtgaaaccc ccttcctaaa tatgaaaatt
    20041 ttgcttgtcc gcttgtctag tatgggcgat ttaattcaca ctttgcccgc aatcgaagat
    20101 ttggcgcgac aatgtcctga tgtagaactg cattggctat gtgaggctgg atttgcagat
    20161 attgcgcgcc tgcatccgtt tgtaaaaaaa atccatgtga tgaaatggcg gcaatggcgc
    20221 aaacatctct ttcgggctga aacttggcgg gaaatgggtc atctgaaaca gactttgcgg
    20281 caggaagtat ttgatttcgt attggacagt caaggtctga ttaaaagcgc gtgtttcgct
    20341 aaaatggcaa aatccccgat ttgtggtttg gataaaaaca gtgcgcgcga gggatgggct
    20401 gctttggcgt atgtaaaaac atacgctgta ccgaagggaa aaaatgccgt ttggcgcaac
    20461 cgtgaactgt ttgcccaagt atttgggtat gtaatgccgg aaacgcaggt atttggcttg
    20521 actgttcctg aagcaggccg tctgaaaaat ttagcgcagc cgtattatgc ggctttgcat
    20581 gcgaccagtc gggacagtaa gttatggcct gtggaaaact ggcggtcgtt gctgcaaaag
    20641 ttgaatgaag aacagcaatg caatatttac ctgccttggg gaaatgaaga tgaaaaaacg
    20701 cgtgccaaac aaattgcaga tgggctgccg tttgctattg tgtgcgacaa aataaattta
    20761 ttgcaggcag cgtatctgct gaaatacgcg gtcggaattg tcggcgtgga taccggtttg
    20821 ctgcatttgg caaatgcctt ggaaaaacct gtggtcggca tttataccga taccgatccg
    20881 attaaaacag gcgttcaggt ttcgccaatt gcaaaaaatt tgggcaatat cgggcagatt
    20941 ccgaccgcag atttggttta tcaagcgctg atggattgtg ttgcagcaga taaaggctaa
    21001 agggtcgtct aaaactgata tggcggcatg atattttcca atttattaga tacaggaatg
    21061 tatatccgct agtctgagta aatgctttaa aaatggtata atcggcaagc attatccgaa
    21121 agatttttga atgaattcgt ttttaaggaa aacggatttg gttttatagg gaagaaggtt
    21181 tggtttcgct ggatggtgaa agcagcgttc tttttaggag ggttcaatga aagcactggt
    21241 cgcagtaaag cgcgtagtgg actacaacgt caaagttcgt gtaaaagccg atggttcgga
    21301 tgtggatatc ggcaatgtca aaatgtcgat gaatccgttt gacgaaatcg ctgtggaaga
    21361 agctgtccgt ttgaaagaag ccggaaaagt aagcgaaatc gtagcggttt ctttgggtga
    21421 gaaaaaatgc gaagaaacct tgcgtacagc tttggcgatg ggtgccgacc gtgccattca
    21481 tgttgaaacc gatactaaac tggagtctct ggccgttgct aagttgctga aagccgttgc
    21541 ggacaaagaa aatccgcaaa ttttcttttt gggcaaacaa gcgattgatg atgatgccaa
    21601 tcaagtggcg caaatgctgg cagctttgct gaatgcggcg caaggtacgt tcgcgtccaa
    21661 agtacaaatt gaaggcgacg aagtgcagat tgtgcgggaa atcgatggcg gcgaagaaac
    21721 catcgcattg aaactgcctg ctgttatcag cgcggatttg cgtttgaacg agccgcgctt
    21781 tgtcaaactc cccaatatta tggcggcaaa gaaaaaacct ttggaaaaac tgactcctga
    21841 cgatttggtt gccgacattt cacctcgttt gaaaacggtg aaatttgccg aacctaaggc
    21901 gcgtcaggca ggcgtaaaag tagcaggcgt tgccgaattg gttgaaaaat tgaaaaacga
    21961 agccaaagtg atttgaggag gctgaaatga gtgtattgat tattgtcgaa cacgacaaca
    22021 aacagttgaa tcctaccact ttgcatgctg ttaccgctgc cgccaaactg ggcaaagtcg
    22081 atttattggt tgccggaaac ggcgcatctg ctgtagtgga attcgcgaag caagtagcgg
    22141 gggtgaaaaa agttttggtt gcagatgctg ctcattatgc cgaaggtttg gctgaagagt
    22201 tggctccgct ggttgttaaa ttggcggccg attaccgcta tgttgcagca acggcaacca
    22261 cattcggtaa aaaccttttg ccccgcgtag cagccttatt agacgtaccg caaatttctg
    22321 atttgaccga aattgtggat aacacgactt ttgtgcgccc catttatgcg ggtaatgcat
    22381 ttgaaaccgt gcaagttgat tcggaaaaat tggtgctgac cttccgtgcg acggcttttg
    22441 atgcagctcc tgtacaaggt ggtcatgccg aggcagttaa tgttgaagca acccctgccc
    22501 aaaacctgag tcgttttgtt aaccgtcagc tttcccattc cgatcgtccc gaactgactc
    22561 aggcaaaagt gattgtttcc ggtggtcgtg cgttgggtag tgcggaaaaa tttaatgaag
    22621 tgctgacacc gttggcggat gttttgggtg cggcaatcgg tgcatcccgt gcagcagttg
    22681 atgccgaata tgcgccaaac gatgctcaag tcggacaaac cggtaaagtg gttgcgccgc
    22741 aactctattt tgcaatcggt atttcaggtg cgattcaaca cgttgccggt atgcaagaca
    22801 gtaaggtaat tgttgcaatc aataaagatg ctgatgcgcc gattttcaat gtagccgatt
    22861 acggattggt tggcgattta tttgaaatcg ttccacaatt aacagaagca ttgaaaaatt
    22921 gatgtttcac gtgaaacttt cagacgacct tgttattaat gaggtcgtct gaaaacattt
    22981 cagcatgatt acgacttata aaaccattac ctccttgacg caggctgagt ttaaagataa
    23041 aggcagccgt tttattgcat ttgcctatcc gattcggaca ttggctgatg tgaaaaaata
    23101 cctcgatccg ttaaaggaag agcatcataa agcacgacac tggtgctatg cctatcgttt
    23161 gggtgtggat ggtgtgcaat ttcgtgccaa cgatgatgga gagccatcag gaagtgctgg
    23221 acgaccaatt ttgggacaga ttgattcggt gggtattacc gacgttttgg tcgtggtcgt
    23281 ccgctatttc ggtggtactt tgttaggtgt tccaggtctg atacatgcgt acaaagaggc
    23341 gacggctcaa gcgttggcag ttgcagaagt agttgaaaag aatattgaaa aaactgtttg
    23401 gctgaaatgt gaatatccgt ttttgaatga agcgatacgc attgctaaac aatatcaggc
    23461 ggatgtattg gagcgggatt tgcagttgga ttgccgattg acggtcagtt tgtcgttggt
    23521 aaattatgag gcctgtgttg cggcttggaa gagtacacgg cagattgaag taaatacgga
    23581 aaagcctttt gaatgaaagg tcgtctgaaa tgctttgtga tggtatttca gacgacctct
    23641 tcgctgacta atcttcttgt gtatatttgt ctaaggcatc gacgctggag cgcaaatata
    23701 accaagccag ttgatggaat tcgcccagcg cgttccatag tgcatcttca ctcataatgc
    23761 tgtattcgcc ttctgtgcgc aaatccacct ccgctccatc ttcaatagcc cgatgacaag
    23821 cctgatattc gtgggtataa aaattgtcca tatcgcgaat caaagcgacg gcatgtttcc
    23881 aacggcggat gtcttcttcc aattgcggta gtaaatgaca ccattcgcgg tatttgcttt
    23941 ggatttcttc aatacgtttt tgcatggttg cttgtccttt tttaatttat gaataagttg
    24001 aataggttgc agagtggaat gaagcggtct tttgtttgat tctactaaaa tttcttcaga
    24061 tgggataaaa gtccctttgt atcgagtttt cgttaaaagt acatatttgt caaggagatg
    24121 gcatgaaact gctggttatc ggtaatggcg gtcgcgaaca cgcgctggct tggaaattgg
    24181 cgcagtcgcc taaagtggaa acagtatttg ttgcgtctgg taatgccggt acagcgattg
    24241 aacccaagct gcaaaacatc gacttgactg cgcatcagga tttgattgaa ttctgtcgta
    24301 aagaaaatat tgtttttacc gtcgtcggcc ctgaagcgcc tttggcggca ggtgttgtgg
    24361 atgatttccg tgctgcagga ctaaaaatat tcggtccgac acaatatgcg gcgcagttgg
    24421 aaagttccaa agatttcgcc aaagcattta tggcgaaata caatattccg accgcgcaat
    24481 atcaaacctt tgaaaacgcc gatgccgcac atgattacgt caatcagaaa ggtgcgccta
    24541 tcgttatcaa agccgatggt ttggcggcag gtaaaggcgt gattgtggcg atgactttgg
    24601 atgaagcgca tgctgcgatt gatgatatgc tgctggacaa caaaatgggc aatgccggcg
    24661 cgcgtattgt gattgaagat ttcctgcaag gcgaagaagc gagttttatc gtcatggttg
    24721 atggcaataa tgtactgcct atggcaacca gccaagacca caagcgtctt ttagacggcg
    24781 acaaaggtct gaatacgggc ggtatgggtg cgtacagccc tgcgcctgtg gtaacgcctg
    24841 ttgtgtacga acgcgcgatg aatgaaatta ttttgccgac cgtagcaggg atgaaagcgg
    24901 aggggcatga gttcaccggt ttcctgtacg caggtttgat gattgatcaa agcggtgcac
    24961 cccatacgat tgagtttaac tgccgtttcg gcgatcctga aacccagccg attatgagcc
    25021 gactgaacag cgacttatcg gatttggttg aagcggcaat agacggcaaa ctcgatagcg
    25081 taaccgcgga atggagcccg caaactgccg tgggcgtggt actggcggcg caaaattacc
    25141 ccgaaacgcc caaaaaaggc gatgttattt ccggtctgga tgctgccaac caagtaggca
    25201 aagttttcca tgcaggtaca acggcaaacg agaaaggtga cgtattgacc aacggcggac
    25261 gcgtattgtg tgttgtggga ttgggcgata atgtggcgca agcgaaagct aaggcatatg
    25321 gcgcgttgga aaaaatcagt ttcgacggga tgcaataccg taaagacatt gccgataaag
    25381 cgattaaccg ttaattagaa agaggatgat gccgtctgaa gccaagtatg actgatgtgc
    25441 ttcagacggt attttatatt atgttatttc cgagaattat cgcagcatca gcgcaacgta
    25501 agttaagcgt ttatttgaaa aaaggcggtt tggtcgctta tccgaccgaa tcttgttatg
    25561 gcttggggtg tcttccgaca ttagccaaag cactcggtaa gttggcgcat ttgaaaaaaa
    25621 gaccgcaaca caagggtatg attgtcatcg ggaatcaatt tgagcaattg cagcctttac
    25681 ttcaaatgcc gtctgaaaat cttcaggata tgcttagaaa agaatggccc gcccctaaaa
    25741 cgttcctatt atccgccaaa tcctgtgtct tacccgagtt acgcgggaaa cagcgcagca
    25801 agttggcggt cagggttccc gcccatgtag gtgcgcgccg cttgtgtcag gctttgcaaa
    25861 cgcctttggt ctcgacttcg tgcaaccgcg caggcaaacg cgcgtgtcgg acggagaggg
    25921 aagtcagaag gcaattcgga cgcgatgtgt ggattgttgg tgggagaatc ggcaggcaga
    25981 aatcgccgag tcagattatt gacggggaaa caggtaaacg tttgcgttag atatgggtac
    26041 ttgaatgaaa actttttttg catacacaaa gaaaaaattt ttcggatagc atttctctac
    26101 atgattgtta ttgcacagag ataaaggtag aaggacgcaa cgtctgcttt aattttgagg
    26161 acggttttgt cgttccggac aataatccga acaatcaagc gggcaagcat ctgaaaacag
    26221 atttttcccg tgttgtttta atccataaaa atgaaaacgc cgaagatgat ta
//
LOCUS       DAXHRP010000010        23641 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.010, whole genome shotgun sequence.
ACCESSION   DAXHRP010000010 DAXHRP010000000
VERSION     DAXHRP010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23641
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.010"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            336..980
                     /gene="rplC"
                     /locus_tag="ACFM72_000316"
     CDS             336..980
                     /gene="rplC"
                     /locus_tag="ACFM72_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HFC6256950.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            980..1600
                     /gene="rplD"
                     /locus_tag="ACFM72_000317"
     CDS             980..1600
                     /gene="rplD"
                     /locus_tag="ACFM72_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HFC6256951.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1597..1911
                     /gene="rplW"
                     /locus_tag="ACFM72_000318"
     CDS             1597..1911
                     /gene="rplW"
                     /locus_tag="ACFM72_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HFC6256952.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVADVTTVTIKGKVKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1917..2750
                     /gene="rplB"
                     /locus_tag="ACFM72_000319"
     CDS             1917..2750
                     /gene="rplB"
                     /locus_tag="ACFM72_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HFC6256953.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLYKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2757..3035
                     /gene="rpsS"
                     /locus_tag="ACFM72_000320"
     CDS             2757..3035
                     /gene="rpsS"
                     /locus_tag="ACFM72_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HFC6256954.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3044..3373
                     /gene="rplV"
                     /locus_tag="ACFM72_000321"
     CDS             3044..3373
                     /gene="rplV"
                     /locus_tag="ACFM72_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HFC6256955.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3383..4075
                     /gene="rpsC"
                     /locus_tag="ACFM72_000322"
     CDS             3383..4075
                     /gene="rpsC"
                     /locus_tag="ACFM72_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HFC6256956.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4059..4475
                     /gene="rplP"
                     /locus_tag="ACFM72_000323"
     CDS             4059..4475
                     /gene="rplP"
                     /locus_tag="ACFM72_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HFC6256957.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4475..4666
                     /gene="rpmC"
                     /locus_tag="ACFM72_000324"
     CDS             4475..4666
                     /gene="rpmC"
                     /locus_tag="ACFM72_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HFC6256958.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4666..4929
                     /gene="rpsQ"
                     /locus_tag="ACFM72_000325"
     CDS             4666..4929
                     /gene="rpsQ"
                     /locus_tag="ACFM72_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HFC6256959.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5151..5519
                     /gene="rplN"
                     /locus_tag="ACFM72_000326"
     CDS             5151..5519
                     /gene="rplN"
                     /locus_tag="ACFM72_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HFC6256960.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5531..5854
                     /gene="rplX"
                     /locus_tag="ACFM72_000327"
     CDS             5531..5854
                     /gene="rplX"
                     /locus_tag="ACFM72_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HFC6256961.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5864..6403
                     /gene="rplE"
                     /locus_tag="ACFM72_000328"
     CDS             5864..6403
                     /gene="rplE"
                     /locus_tag="ACFM72_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HFC6256962.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6406..6711
                     /gene="rpsN"
                     /locus_tag="ACFM72_000329"
     CDS             6406..6711
                     /gene="rpsN"
                     /locus_tag="ACFM72_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HFC6256963.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6727..7119
                     /gene="rpsH"
                     /locus_tag="ACFM72_000330"
     CDS             6727..7119
                     /gene="rpsH"
                     /locus_tag="ACFM72_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HFC6256964.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7133..7666
                     /gene="rplF"
                     /locus_tag="ACFM72_000331"
     CDS             7133..7666
                     /gene="rplF"
                     /locus_tag="ACFM72_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HFC6256965.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGAEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7680..8033
                     /gene="rplR"
                     /locus_tag="ACFM72_000332"
     CDS             7680..8033
                     /gene="rplR"
                     /locus_tag="ACFM72_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HFC6256966.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8052..8570
                     /gene="rpsE"
                     /locus_tag="ACFM72_000333"
     CDS             8052..8570
                     /gene="rpsE"
                     /locus_tag="ACFM72_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HFC6256967.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8563..8748
                     /gene="rpmD"
                     /locus_tag="ACFM72_000334"
     CDS             8563..8748
                     /gene="rpmD"
                     /locus_tag="ACFM72_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HFC6256968.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8750..9184
                     /gene="rplO"
                     /locus_tag="ACFM72_000335"
     CDS             8750..9184
                     /gene="rplO"
                     /locus_tag="ACFM72_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HFC6256969.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9196..10506
                     /gene="secY"
                     /locus_tag="ACFM72_000336"
     CDS             9196..10506
                     /gene="secY"
                     /locus_tag="ACFM72_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HFC6256970.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10511..10729
                     /gene="infA"
                     /locus_tag="ACFM72_000337"
     CDS             10511..10729
                     /gene="infA"
                     /locus_tag="ACFM72_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HFC6256971.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10750..10863
                     /gene="rpmJ"
                     /locus_tag="ACFM72_000338"
     CDS             10750..10863
                     /gene="rpmJ"
                     /locus_tag="ACFM72_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFC6256972.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10929..11291
                     /gene="rpsM"
                     /locus_tag="ACFM72_000339"
     CDS             10929..11291
                     /gene="rpsM"
                     /locus_tag="ACFM72_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HFC6256973.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11311..11706
                     /gene="rpsK"
                     /locus_tag="ACFM72_000340"
     CDS             11311..11706
                     /gene="rpsK"
                     /locus_tag="ACFM72_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HFC6256974.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11726..12346
                     /gene="rpsD"
                     /locus_tag="ACFM72_000341"
     CDS             11726..12346
                     /gene="rpsD"
                     /locus_tag="ACFM72_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HFC6256975.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12372..13358
                     /gene="rpoA"
                     /locus_tag="ACFM72_000342"
     CDS             12372..13358
                     /gene="rpoA"
                     /locus_tag="ACFM72_000342"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HFC6256976.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13382..13750
                     /gene="rplQ"
                     /locus_tag="ACFM72_000343"
     CDS             13382..13750
                     /gene="rplQ"
                     /locus_tag="ACFM72_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HFC6256977.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHEAIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13897..14610
                     /gene="minC"
                     /locus_tag="ACFM72_000344"
     CDS             13897..14610
                     /gene="minC"
                     /locus_tag="ACFM72_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HFC6256978.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14638..15453
                     /gene="minD"
                     /locus_tag="ACFM72_000345"
     CDS             14638..15453
                     /gene="minD"
                     /locus_tag="ACFM72_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HFC6256979.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15457..15720
                     /gene="minE"
                     /locus_tag="ACFM72_000346"
     CDS             15457..15720
                     /gene="minE"
                     /locus_tag="ACFM72_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HFC6256980.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15724..16644
                     /gene="oxyR"
                     /locus_tag="ACFM72_000347"
     CDS             15724..16644
                     /gene="oxyR"
                     /locus_tag="ACFM72_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HFC6256981.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16641..16832)
                     /locus_tag="ACFM72_000348"
     CDS             complement(16641..16832)
                     /locus_tag="ACFM72_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256982.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(16974..19811)
                     /locus_tag="ACFM72_000349"
     CDS             complement(16974..19811)
                     /locus_tag="ACFM72_000349"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HFC6256983.1"
                     /translation="MLDKYSPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGTVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADSGEIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESTDDLADYLKYLPMMTRLTEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            complement(19908..20717)
                     /gene="zupT"
                     /locus_tag="ACFM72_000350"
     CDS             complement(19908..20717)
                     /gene="zupT"
                     /locus_tag="ACFM72_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HFC6256984.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            complement(20898..22154)
                     /locus_tag="ACFM72_000351"
     CDS             complement(20898..22154)
                     /locus_tag="ACFM72_000351"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HFC6256985.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQ
                     TNKERMVRMSEYSREMFRRFEAQTGMNFEGRKKGTLQVFRQTKEVEAAKQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETETGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSHYQA"
     gene            complement(22233..23624)
                     /locus_tag="ACFM72_000352"
     CDS             complement(22233..23624)
                     /locus_tag="ACFM72_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC6256986.1"
                     /translation="MQLFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
BASE COUNT         6151 a         4976 c         6010 g         6504 t
ORIGIN      
        1 cacagcctca tcacccgcat cgatttcaac ctgttttgcc gctttgacga actgagcatc
       61 cccgattaca gtcatcaacc atattccggt ttgtcggaga aagatgcata cgctgtgatg
      121 accggatacc gacccgttaa aagagtccga ccctatgccg tctgaaaatt caaaacgctt
      181 cagacggcat attgaagata tttctgatat ttctgttgat atttctttga cttgtcagat
      241 ataatgccga gcttggtaca tttgtgccaa gtttaacttt gtctgaaaga caggccaatc
      301 gtagcctgtc cctttacttt aaaaggaaaa taatcatgac tttaggtctg gttggacgca
      361 aagttggtat gacccgcgtg ttcgacgaac agggtgtttc tgttccggta accgttttgg
      421 atatgtctgc caaccgcgtt acacaagtaa aatccaaaga tactgacggc tatactgccg
      481 ttcaagttac ctttggtcag aaaaaagcca atcgtgtcaa caaagccgaa gccgggcact
      541 ttgcaaaagc aggtgttgaa gccggtcgcg gtttgattga gtttgctttg actgaagaaa
      601 aactggctga attgaaagct ggtgacgaaa tcaccgtttc tatgtttgaa gtcggtcaac
      661 tggtcgatgt aaccggtacc tctaaaggta aaggtttctc cggcacgatt aaacgtcata
      721 acttcggtgc ccaacgtact tcccacggta actcccgttc tcaccgtgtt ccaggctcta
      781 tcggtatggc gcaagacccg ggtcgcgtgt tccccggtaa acgcatggcc ggccaatacg
      841 gcaacaccaa agcaactgtt caaaaattgg aagttgtccg tgttgacgca gaacgccaac
      901 tgctgttggt taagggtgct gttccgggtg cggtcaacag cgatgttgta gttcgtccca
      961 gcgtgaaagt aggtgcgtaa tggaattgaa agtaattgac gctaaaggac aagtttcagg
     1021 cagtctgtct gtttctgatg ctttgttcgc ccgcgaatac aatgaagcgt tggttcatca
     1081 gctggtaaat gcctacttgg caaacgcccg ctccggtaac cgcgctcaaa aaacccgtgc
     1141 cgaagtaaaa cactcaacca aaaaaccatg gcgtcaaaaa ggtaccggcc gtgcccgttc
     1201 cggtatgact tcttctccgc tgtggcgtaa aggtggtcgc gcgttcccga acaagcccga
     1261 cgaaaacttc actcaaaaag taaaccgcaa aatgtaccgt gccggtatgg cgactattct
     1321 gtcccaattg actcgtgacg agcgtttgtt tgcgattgag gcgttgactg ccgaaactcc
     1381 taaaaccaaa gtttttgccg aacaagtgaa aaatctgggt ctggagcaag tgttgtttgt
     1441 aaccaaacag ctcgacgaga atgtttactt ggcttcacgc aacttgccaa acgtgttggt
     1501 tttggaagct caacaagttg atccttacag cttgctgcgt tacaaaaaag taatcatcac
     1561 taaagatgca gttgcacaat tagaggagca atgggtatga atcaacaacg tttgactcaa
     1621 gtgattttgg cacctatcgt ttctgaaaaa agcaacgtat tggctgaaaa acgtaaccaa
     1681 atgacgttta aagttttggc aaatgcaacc aaacctgaaa ttaaagcggc tgttgagctg
     1741 ctgttcggcg ttcaagttgc agacgttact actgttacca ttaaaggtaa agttaaacgt
     1801 tttggtcgca ctttaggtcg tcgcagcgat gttaaaaagg cttatgtaag cttggctgcc
     1861 ggtcaagagt tggatttgga agccgctgct gcagctgcag ataaggaata aacaaaatgg
     1921 caatcgttaa aatgaagccg acctctgcag gccgtcgcgg catggttcgc gtggtaacag
     1981 aaggtttgta caaaggtgca ccttatgcac ctctgctgga aaagaaaaat tctactgccg
     2041 gtcgtaacaa caatggtcat attactaccc gtcataaagg tggtggtcat aaacatcatt
     2101 accgcgtcgt agattttaaa cgtaacaaag acggtatccc tgcaaaagta gagcgtatcg
     2161 aatatgaccc taaccgtact gcatttatcg cactgttgtg ctatgcagat ggtgagcgtc
     2221 gctacattat tgctcctcgt ggtattcaag ccggtgcagt attggtttcc ggtgctgaag
     2281 ctgcgatcaa agtaggtaac actctgccga tccgcaatat tcctgttggt acaactattc
     2341 actgtatcga aatgaaacca ggtaaaggtg cgcaaattgc acgttctgcc ggtgcttctg
     2401 cggtattgct ggctaaagaa ggcgcgtacg ctcaagtccg cctgcgctct ggcgaagtcc
     2461 gtaaaatcaa cgtagattgc cgtgcaacca tcggtgaagt cggtaacgaa gagcaaagcc
     2521 tgaaaaaaat cggtaaagcc ggtgccaatc gttggcgcgg tattcgtccg actgtacgtg
     2581 gtgttgtcat gaaccctgtc gatcacccgc atggtggtgg tgaaggccgt acgggcgagg
     2641 cccgcgaacc ggtcagccca tggggtactc ctgctaaagg ctaccgcact cgtaataaca
     2701 aacgcacgga taacatgatt gttcgtcgcc gttactcaaa taaaggttaa tttagtatgg
     2761 ctcgttcatt gaaaaaaggc ccatatgtag acctgcattt gctgaaaaaa gtagatgctg
     2821 ctcgcgcaag caacgacaaa cgcccgatta aaacctggtc tcgtcgttct accattctgc
     2881 ctgattttat cggtctgacc attgctgtgc acaacggccg cacccatgtg cctgtgttta
     2941 tcagcgacaa tatggttggt cataaattag gcgaattctc attgacccgt acctttaaag
     3001 gccacttggc cgataaaaag gctaaaaaga aataaggtga atcatgagag taaatgcaca
     3061 acataaaaat gcccgtatct ctgctcaaaa ggctcgtttg gtagctgatt tgattcgtgg
     3121 taaagacgtt gcccaagctt tgaatatttt ggctttcagt cctaaaaaag gtgccgagct
     3181 gattaaaaaa gtattggagt cagctattgc taatgccgag cacaataacg gtgcggacat
     3241 tgatgaactg aaagtggtaa ctatctttgt tgacaaaggc ccaagcttga aacgttttca
     3301 agctcgcgcc aaaggtcgcg gtaaccgcat cgaaaaacaa acttgtcata tcaatgtgac
     3361 agtgggtaac taaggaaaag ctatgggaca aaagattaac cctacaggct ttcgcctggc
     3421 ggtaactaaa gactgggctt caaaatggtt tgctaaaagc accgactttt ctactgtttt
     3481 gaagcaggat atcgatgttc gcaattattt gcgtcaaaaa ttggccaatg cttcggttgg
     3541 tcgagtggtt attgaacgcc ctgcaaaatc tgcacgcatt accattcact ccgctcgtcc
     3601 gggtgtggtt atcggtaaaa aaggtgagga tatcgaggtt ttgaaacgtg acttgcaagt
     3661 cttgatgggt gtacctgttc atgtaaatat tgaagagatt cgccgtcctg agttggatgc
     3721 tcaaattatt gctgacggta ttgcccagca gttggaaaag cgcgttcaat tccgtcgtgc
     3781 tatgaaacga gcaatgcaaa atgcaatgcg ttctggtgct aaaggcatta agattatgac
     3841 ttcaggccgt ctgaatggtg cggatattgc ccgtagcgaa tggtatcgtg aaggtcgcgt
     3901 gccactgcat actttacgtg caaatgtaga ttatgcaacc agcgaagcgc acaccacata
     3961 tggtgtattg ggtctgaaag tttgggttta tacggaaggc aatattaaat cttccaaacc
     4021 tgaacatgag agtaaacaaa gaaaggcagg tagacgtaat gctgcagcca actagactga
     4081 aataccgtaa gcaacaaaag ggtcgcaata ccggcatcgc tactcgcggt aataaggtaa
     4141 gtttcggtga gttcggcttg aaagccgtag gtcgtggtcg tttgactgcc cgtcaaatcg
     4201 aagctgctcg tcgtgcaatg acccgtcata tcaaacgtgg tggtcgtatt tggattcgtg
     4261 tattccctga taaaccgatt actgaaaagc ctattcaagt tcgtatgggt ggcggtaaag
     4321 gtaacgtgga atattacatt gccgaaatta aaccaggtaa agtgttgtat gaaatggatg
     4381 gcgttccaga ggaactggct cgtgaagcat tcgagttggc tgctgccaaa ttgcctattc
     4441 ctacaacctt tgtagtaaga caggtgggtc aataatgaaa gcaaatgaat tgaaagacaa
     4501 atccgttgag cagttgaatg cagatttgtt ggacttgttg aaagctcagt ttggcttacg
     4561 tatgcaaaac gctaccggtc aattaggcaa accaagtgaa ttgaaacgtg tacgtcgcga
     4621 tattgctcgt attaaaaccg ttttaactga aaaaggtgct aagtaatgag cgaaactaaa
     4681 aatgttcgta ctttgcaagg caaagtagta agcgacaaaa tggataaaac cgtaacagta
     4741 ttggttgagc gtaaagtaaa acatccgctg tatggtaaga ttattcgatt atctactaaa
     4801 atccatgccc atgatgaaaa taatcaatat ggaattggtg atgtggttgt tatatcggaa
     4861 tcccgtccat tgtcaaaaac taaatcttgg gttgtcagtg agctggttga gaaagcacgt
     4921 tctatttaag aattaaagca acgtgcttgg aatgggaaac gaagtattgc agcaaattta
     4981 atttgcgtgt aaacttcgtt tcctgtcttt cagtttcttc tggaagtttc ttccctttcg
     5041 gggtccaaga ctggtttact tgaaccgcaa ggtttcattt aataagcagc ggctttgctg
     5101 taagttatct gaaagtggta aattaagttg gttaatttaa aggtaataac atgattcaaa
     5161 tgcagaccat cttagatgtg gctgataact ctggtgcgcg tcgcgtaatg tgtatcaagg
     5221 tattgggcgg atctaagcgt cgctacgctt ctgttggcga tattattaaa gtggcagtta
     5281 aagatgcggc tccgcgtggc cgtgtcaaaa aaggcgatgt atataatgcg gtagttgttc
     5341 gtactgctaa gggtgtacgt cgtcctgatg gtgcgttaat taaattcgat aacaatgccg
     5401 ccgtgttact gaataataaa cttgaacctt tgggtactcg tatctttggt ccggtaaccc
     5461 gtgaattgcg tactgagcga tttatgaaaa tcgtttcatt ggcacctgaa gtattataag
     5521 gaatggcacg atgaataaaa tcattaaagg cgatagggtt gtagtaattg ctggtaagga
     5581 taaaggtaag cagggtcaag tagttcgagt gttgggtgat aaagttgttg ttgagggcgt
     5641 taatgttgta aaacgccatc aaaaacctaa tccaatgcgt ggcattgagg gcggtattat
     5701 tactaaagaa atgcctttgg atatttctaa tatcgcaatc ctgaatccgg aaactaataa
     5761 agcggaccgt gttggtatta agctgattga aaatgaaggc aaagttaaac gcgttcgttt
     5821 cttcaaatca aatggctcta tcattggggc ataaggagat aacatggctc ggttgagaga
     5881 gttttataaa gagacagttg ttcctgaatt ggttaaacaa tttggttaca aatcagtaat
     5941 ggaagtcccg cgtattgaaa aaattacctt gaatatgggt gtgggtgagg ctgttgctga
     6001 taaaaaagtt atggaacatg ctgtttccga tttagagaaa attgccggtc aaaaaccggt
     6061 tgttactgtt gcccgtaaat ctatcgcagg ttttaaaatc cgtgataact atccggttgg
     6121 ttgcaaagta acattgcgtc gtgatcaaat gtttgaattc ttggatcgtt tgattactat
     6181 tgcattacct cgcgtacgtg acttccgtgg tgtgagcggt aaatcatttg atggccgtgg
     6241 caattacaat atgggtgttc gtgagcaaat tatttttccg gaaattgaat acgataaaat
     6301 tgatgctttg cgtggtttga atattactat tactactaca gcaaaaaccg atgaggaagc
     6361 gaaagcttta ttgtcattgt ttaaatttcc gttcaaagga taatcatggc taagaaagca
     6421 cttattaatc gtgatctgaa acgtcaagct ttggctaaaa aatatgcggc taaacgcgcg
     6481 gcaattaaag cggtaatcaa tgattcgaat gcaactgagg aagagcgttt tgaggctcgt
     6541 ttgaggtttc aatccattcc tcgtaatgcg gcacctgtgc gtcaacgtcg tcgttgtgct
     6601 ttgacaggtc gccctcgtgg tactttccgt aaatttggtt tgggtcgtat taaaatccgt
     6661 gaaatcgcca tgcgtggcga aattccgggt gttgttaaag ccagctggta ataggagtaa
     6721 ttaagaatga gtatgcatga tcctatttcc gatatgttga ctcgtatccg caatgcgcaa
     6781 cgtgctaata aagcagcggt tgcaatgcct tcttcaaaat taaagtgtgc tattgcaaag
     6841 gtattgaaag aagaaggata tattgaggac ttcgcagttt catctgacgt aaagtctata
     6901 ttggaaattc aattaaaata ctatgcaggt cgtcctgtaa ttgaacaaat caagcgtgta
     6961 tctcgccccg gtttgcgtat ttataaagcg tctagtgaga ttccaagtgt tatgaatggc
     7021 ttgggtattg ctattgttag tacttctaaa ggtgtaatga ctgatcgtaa agcacgttct
     7081 caaggtgttg gtggtgagtt gttatgcatt gtagcctagt ggaggaaaag aaatgtcacg
     7141 tgtcgcaaaa aacccagtga ctgttcccgc tggtgtagaa gtaaaatttg gagcagaggc
     7201 attagttatt aagggtaaga acggtgaatt gtcttttcct ttgcattctg atgtagccat
     7261 tgaatttaat gatggcaaat tgacttttgt tgcgaataac agcagtaaac aagcaaatgc
     7321 aatgtctggt actgctcgcg cattagtcag caatatggtt aaaggtgttt cagaaggttt
     7381 tgagaaaaga ttgcaattga taggtgtggg ttatcgtgct caagcacaag gtaaaatctt
     7441 gaatctgtct ttgggttttt ctcatccgat cgtatatgaa atgcctgaag gtgtctccgt
     7501 tcaaactcct agccaaacag agattgtttt aaccggctcg gataaacaag ttgttggtca
     7561 agttgctgct gagattcgtg cgttccgtgc tcctgagcct tataaaggta aaggtgttcg
     7621 ctatgtagga gaagtagtgg taatgaaaga agccaagaaa aaataattga ggttcactaa
     7681 tggataaaca tacaacccga ctccgtcgtg cacgcaaaac ccgtgctcgt attgcggact
     7741 tgaaaatggt aagattatgt gtgttccgaa gcaataatca tatttatgct caagtaatta
     7801 gtgctgaagg tgataaagta ttggctcaag cctctacatt ggaagctgag gtgcgcggta
     7861 gtctgaaatc tggaagcaat gttgaagcag ctgcaatagt tggtaaacgt atcgctgaaa
     7921 aagctaaagc agcaggtgta gaaaaggttg cttttgatcg ttcaggtttc caatatcacg
     7981 gtcgtgtgaa ggctttggct gaagctgctc gtgaaaatgg tttaagcttc taaatatttg
     8041 gagactttca gatggcaaaa catgaaattg aagaacgcgg tgacggtctg attgaaaaga
     8101 tggtcgctgt taatcgcgta actaaagtag ttaaaggtgg ccgtatcatg gctttctcag
     8161 cactgactgt tgttggtgat ggtgatggtc gcattggtat gggcaaaggt aaatcaaaag
     8221 aagtaccagt tgctgttcaa aaagcaatgg atcaagctcg acgctctatg attaaagtac
     8281 ctttgaaaaa cggtactatt catcatgagg ttattggccg tcatggtgct actaaagtat
     8341 ttatgcagcc tgctaaagag ggtagtggcg taaaagccgg tggacctatg cgtttggttt
     8401 ttgatgctat gggcattcat aatatctccg ccaaagtgca cggatctact aacccatata
     8461 atatcgtacg tgcaacatta gatggtttgt ctaagttgca tactcctgct gatatcgcag
     8521 ccaaacgtgg cttgacagtg gaagacattt tgggagttaa ccatggctga acaaaaaaag
     8581 attagggtta cattggttaa aagcctgatt ggtacaattg aatctcatcg tgcatgtgca
     8641 cgcggtttag gtttgcgtcg tcgcgagcat acggtagagg ttttagatac ccctgaaaac
     8701 cgtggtatga ttaataaaat cagctacttg ttgaaagtgg agtcttgata tgtttttgaa
     8761 tacaattcaa cctgctgttg gtgctacgca tgctggtcgt cgtgttggac gcggtattgg
     8821 tagtggtctt ggcaaaacgg gtggtcgtgg tcataaaggt caaaagagcc ggtctggtgg
     8881 gtttcataag gtgggtttcg agggtggtca aatgcccttg caacgacgcc tccctaaaag
     8941 aggttttaaa tctttaacag catcagctaa tgcacagctt cgtttaagtg aactggaatc
     9001 aattgctgtt aatgagattg atattttggt cttaaagcaa gcgggtctga ttgcatctac
     9061 agtctctaat gttaaagtta ttgcttctgg tgaaatttct aaggcagttg ctttgaaggg
     9121 tattaaagtt accaaaggtg cgagagctgc tatcgaggct gttggtggta agattgaaat
     9181 gtaaggttta atattgtggc taatcaacaa acgtcatcag gttcatccaa atttggagat
     9241 cttaagaaac gtcttttgtt tctatttgga gcattgattg tttttcgaat tggtgcccat
     9301 atacccgtac ctggagttga tgctgttgct ttagctaaat tatacgaaag cgctggaaac
     9361 ggcatcctgg gaatattgaa tatgttttcc ggtgggtcgt tagagcgctt tagtatattt
     9421 gcaataggaa ttatgccata tatttcagct tctattattg tacagctcgc ttctgaaatt
     9481 ttgccatcat tgaaggcttt aaaaaaagaa ggggaggctg gtagaaaggt aattacgaaa
     9541 tatactaggt atggtactgt tttgttagca attcttcaaa gtctaggtgt tgcatctttc
     9601 gtatttcagc aaggaattgt tgtaacaagt tcatttgagt ttcatgtttc cacggtagtt
     9661 tctttggtaa cgggaaccat gtttcttatg tggcttgggg agcaaattac tgaaaggggt
     9721 atcgggaacg gtatttcttt aatcattacg gcaggtattg cttcaggtat tccttcgggt
     9781 attgcaaagc tggttacact gacgaaccaa ggttctatga gcatgcttac ggcgttgttt
     9841 attgtatttg gtgccttatt attaatttat ttggttgtat actttgaaag tgcacagcgg
     9901 aagattccta ttcattatgc aaaacgccag tttaatggta gggcgggtag tcaaaatacg
     9961 catatgcctt tcaagttgaa tatggctggt gttattcccc caatttttgc ttccagtatt
    10021 attctatttc catctactct tttaggttgg tttggttcgg ctgatacaaa tagtgttttg
    10081 cacaaaatag ctggattgtt acaacacggt caattgctgt atatggcttt atttgcagcg
    10141 acagttattt tcttttgtta tttttatacg gctttggttt ttagccctaa agaaatggca
    10201 gagaatttaa aaaagagtgg tgcttttgtt cctgggatta gacctggtga gcagacctct
    10261 aggtatttag aaaaagttgt attacgtttg acattgtttg gagctcttta tattacaact
    10321 atttgtttaa ttccagagtt cttaactacg gttttaaatg taccttttta tttgggtggc
    10381 acgtctttgt tgattctagt tgttgtaacg atggatttta gtacacaaat aaattcgtat
    10441 aggcttactc aacagtatga taagttaatg actcgttcag aaatgaaatc attttctcgg
    10501 aaatagaatt atggcgaaag aagatactat ccaaatgcaa ggtgaaattc ttgaaacttt
    10561 acctaatgca acatttaaag taaaacttga gaatgaccat attgtattgg gtcatatttc
    10621 tgggaagatg cggatgcatt acattcgtat ttctccggga gataaggtca cagtagagct
    10681 gacaccttat gatctaacta gggctcgaat cgttttcaga gcaagataaa ccaataaaag
    10741 gaaaataaaa tgcgtgtaca accatctgtt aagaaaattt gccgaaattg caagattatt
    10801 cgtcgaaatc gtgtagttcg tgtaatttgt actgatctcc gtcacaaaca gcgtcaaggt
    10861 taatggaata tttcttttaa tgtgattctg tgatatagtg acacactttg ccctaaaaag
    10921 gaaaaaatat ggctcgtatt gcaggggtaa atatccctaa taacgcacac atcgtaattg
    10981 gtcttcaggc tatttacggt attggtgcta ctcgtgctaa attgatttgt gaggctgcaa
    11041 atattgcgcc tgatactaaa gcaaaagatt tggacgagac tcaattagat gctttgcgtg
    11101 accaagttgc caagtatgaa gtagaaggtg atttgcgtcg tgaggtaact atgagtatca
    11161 agcgattgat ggacatgggc tgctatcgtg gcttccgtca tcgtcgcggc ttaccatgcc
    11221 gcggtcaacg cactcgtaca aatgcgcgta cccgcaaagg tccgcgtaaa gcgattgctg
    11281 gtaagaaata aattttaagg aattttatta atggctaaag caaacacagc ttcacgtgta
    11341 cgtaaaaaag tacgtaaaac cgtgagtgag ggtattgtgc acgttcatgc atctttcaac
    11401 aataccatca ttacaatcac tgaccgtcaa ggcaatgcgt tgtcttgggc tacctctggc
    11461 ggcgctggtt ttaaaggttc tcgtaaaagt acaccatttg cagcacaagt tgcagcagaa
    11521 gcagctggta aagttgccca agagtatggc gttaaaaatt tagaggttcg tattaaaggt
    11581 ccaggtccag gtcgtgaatc ctctgtacgt gctttgaatg ctcttggttt caagattacc
    11641 agcattactg acgttacccc gttgcctcat aacggttgcc gtccgcctaa aaaacgtcgt
    11701 atttaatatt ggagtgattt gaaacatggc acgttatatt ggccctaaat gtaagttggc
    11761 acgtcgcgaa ggtacggatt tgtttttgaa gagtgcgcgc cgctctttgg attctaaatg
    11821 taaaattgat tccgctcctg gtcagcatgg tgcaaaaaaa ccgcgtttgt cagactatgg
    11881 tttgcagttg cgtgaaaaac aaaaaatccg ccgtatttat ggcgtattag aacgtcagtt
    11941 ccgtcgttat ttcgcagaag ctgatcgtcg taaaggttct accggcgagt tgctgttgca
    12001 gttgctggaa tctcgtttgg ataatgtcgt ttatcgtatg ggtttcggtt ctacccgagc
    12061 tgaagcaaga cagcttgttt ctcataaggc gatagttgtg aatggacaag ttgtcaatat
    12121 tccttctttc caagtgaaag ctggtgatgt tgtctcagtt cgtgaaaaag ccaaaaaaca
    12181 ggtacgtatt caagaagcat tgggtttggc aactcaaatc ggcttgccgg gttgggtttc
    12241 tgtagatgcg gataaacttg agggtgtgtt caaaaacatg ccggatcgct cggaattgac
    12301 cggtgatatt aatgaacagc tggtggtaga gttctactct aaataatgct agctcagtga
    12361 gggacagtta aatgcagaat agcacaaccg aatttttgaa acctcgtcaa attgatgtaa
    12421 atactttttc tgcaactcgt gcaaaagtat ctatgcagcc atttgaacgt ggtttcggtc
    12481 ataccttagg taatgctttg cgccgtatct tactgtcatc catgaatggt tttgctccta
    12541 ctgaagtagc tattgccggt gtattacacg aatattctac tgttgatggt attcaggaag
    12601 atgttgttga cattttgctg aatattaaag gtattgtgtt taaactccat ggtcgtagcc
    12661 aagttcaact tgtgttgaag aaatcaggtt caggtgtcgt atctgccggt gatattgagt
    12721 tgccgcatga tgtagaaatt ctgaatcctg gtcatgtcat ttgtcatttg gctgataacg
    12781 gtcaaattga gatggaaatt aaagtagagc aaggtcgtgg ttatcaatct gtttcaggtc
    12841 gtcaggtagt tcgtgatgag aaccgtcaga ttggtgcaat ccagttggat gcgagctttt
    12901 cgcccatcag ccgtgttagc tttgaggttg aacctgcacg tgtagagcag cggacggatc
    12961 ttgataagtt ggttttggat atcgaaaccg acggttctat tgatcctgag gaagctgtac
    13021 gcagtgcggc acgtattttg attgatcaga tgtctatttt tgctgatttg cagggtacgc
    13081 ctgtggagga ggttgaagaa aaagcacctc ctatcgaccc tgttcttttg cgtccggtgg
    13141 atgatctgga attgacagta cgttcagcta attgtttgaa agctgaggat atttattata
    13201 ttggcgattt gattcaacgc actgaaaccg agcttcttaa aacgccgaat ttgggacgta
    13261 aatctttgaa tgagattaag gaagtattgg catctaaagg tttgacactg ggttctaagt
    13321 tggaagcatg gccacctgta ggcttggaaa agccttaatg aagaattaaa ggataattga
    13381 tatgcgtcat cgtaatggca atcgcaaatt aaaccgtacc agcagtcatc gtgctgcaat
    13441 gctgcgtaat atggcgaatt cattattgac tcacgaagct attgtaacaa ctctgcctaa
    13501 ggccaaggaa ttgcgccgtg tagtagagcc gttgattaca ttgggtaaaa agccgtcatt
    13561 ggcaaaccgc cgtttggcat ttgaccgtac tcgcgaccgt gatgttgtag taaaactgtt
    13621 tggcgatttg ggtcctcgtt ttactgctcg taacggtggt tatgttcggg tgttgaaata
    13681 cggattccgt aaaggtgata atgcacctct ggcactggtt gaattggttg acaaaccggc
    13741 tgctgagtaa ttttagtcat ataacgccat ctgccgaaaa gcaggtggcg ttatttttgc
    13801 aatatctgat aggtaatagg gtattggcta tcatgtttaa aatattaatt gaatagctaa
    13861 ggtttgcgcg gtaaacttac atcattaaaa aattctatga tggtttatat aatgaatgct
    13921 ttcgatataa agtcgacaaa gatggacgta ttgtctatat ctttgcatac gtcagacttg
    13981 tttgatttgg aagatgtgct ggtcaaattg ggcaagaagt ttcaagagtc tggtgttgtt
    14041 ccatttgtgc tggatgttca agagtttgat tatcccgagt ctttggatct tgctgcattg
    14101 gtttcgttgt tttcaaggca tggtatgcaa attttgggtc tgaagcattc taatgaacgt
    14161 tgggctgctg cggctatgaa gtatcatttg ctgttttgtc tgtctcattc ggaaaatgtt
    14221 aaagaactgg gtcaggttga ggtgcagaaa acggaggatg gtcagaaagc aaggaaaaca
    14281 gtattgatta catcccctgt ccgtaccggt cagcaggttt atgccgaaga tggcgatttg
    14341 attgttacgg gggcggtcag ccagggggcg gaattgattg cggatggcaa tatacatatt
    14401 tatgcgccga tgagggggcg tgctttggcc ggtgccaagg gtgatacttc tgcccgcata
    14461 tttatccact ccatgcaggc agaactggtt tctgtggcgg gtatttaccg taattttgaa
    14521 caggatttgc cgaaccatct gcacaagcag ccggtacaga tattgttgca ggataaccga
    14581 ttggttatca gtgcaattgg ctcagagtaa ttgtttgata tttaaaaagg aaatattgtg
    14641 gcaaaaatta ttgtagtaac ttcaggtaag ggcggtgtcg gtaaaacgac taccagtgcc
    14701 agtattgcga caggtttggc attacgcgga tataaaactg cggtaattga ttttgatgtg
    14761 ggtttgcgta acctcgacct cattatgggt tgcgagcgtc gtgtcgttta tgacctgatc
    14821 aatgtcattc agggggaggc gacgctcaac caagctttga ttaaagataa aaattgtgaa
    14881 aacctgttta ttttgccggc ttcccagact cgggataaag acgctttgac acgcgagggc
    14941 gtagaaaaag tgatgcagga gctgtccggc aagaaaatgg gctttgagta tattatttgc
    15001 gactctcctg ccggtattga gcagggtgca ttgatggcgt tgtattttgc tgatgaagcc
    15061 attgtaacga ccaatcctga ggtttccagt gtgcgtgact ccgacaggat tttgggaatt
    15121 ttgcaaagca aatcccataa ggcagagcaa ggcggttcgg ttaaagaaca tctgttgatt
    15181 acgcgttatt ctcccgaacg tgtggcaaaa ggcgaaatgc tgtctgtaca ggatatttgc
    15241 gatattctgc atattccttt gctgggtgtg attcctgaat cccaaaacgt cttgcaggca
    15301 tccaattccg gagaaccggt catccatcag gacagcgtgg cggcttccga ggcatataag
    15361 gacgttattg cccgtctttt gggcgagaac cgtgaaatgc gtttcttgga agctgagaaa
    15421 aaaagcttct tcaaacgtct gtttggagga taaggtatgt cattaatcga atttttattc
    15481 ggcagaaagc agaaaacggc aaccgttgcc cgcgaccgcc ttcaaatcat cattgcccaa
    15541 gagcgcgccc aagaaggtca ggctccggat tacctgccga ctttacgtaa agagttgatg
    15601 gaagtcctgt ccaaatatgt gaatgtttca ttagacaata tccgtatttc ccaggaaaaa
    15661 caggatggta tggatgtgct tgagttgaac attactttgc cggaacagaa aaaggtatag
    15721 gacatgacct taaccgaatt gcggtacatc gtcgcagtcg cccaagaacg tcatttcggc
    15781 agggcggcgc ggcgttgttt tgtcagtcag cccactttgt ctattgccat taagaaattg
    15841 gaagaagagc ttgccgtctc tttgtttgac cggagcagca acgatattat tacgaccgag
    15901 gcgggggaac gtatcgttgc acaggcgcgt aaggtgttgg aagaggcaga gcttatcagg
    15961 catttggcaa atgaagaaca aaacgagctg gagggtgcgt tcaaactcgg gctgattttt
    16021 acggttgcgc cgtacctgct gccgaaactg attgtctcgt tgcgccgtac tgcaccgaaa
    16081 atgcctttga tgttggaaga gaattacacg catactttga ccgagtcgct caaacgcggg
    16141 gacgttgatg cgattatcgt tgccgaaccg tttcaagagc cgggcattgt taccgaaccc
    16201 ttgtatgacg aaccgttttt cgtgattgtc ccgaaagggc attcatttga ggaactggat
    16261 gccgtttcgc cccggatgct gggtgaggag caggttttgc tgctgacgga aggcaactgt
    16321 atgcgggatc aggtactctc aagctgttcc gaattggcgg cgaaacaacg catacagggg
    16381 ttgaccaata cattgcaggg cagctcgatc aatacaatcc gccatatggt cgccagcggt
    16441 ttggcaatca gcgtgttgcc ggcaaccgca ctgaccgaga acgatcatat gctgttcagc
    16501 attattccgt ttgagggtac gccgccaagc cgacgggtcg tattggcgta ccgccgcaat
    16561 tttgtccgtc cgaaggcgtt gtcggcgatg aaggcggcga ttatgcagtc gcagcttcac
    16621 ggggtaagtt ttatccgcga ctaggcgcag gcattgtttt caaaacgcca tttccctgag
    16681 ccgacaacac ggtatgccaa gatattgccg tcatcatcga ttttgagtat agcatcgcca
    16741 cggaaactgc cgtcctgaag atattcgact tttgcatcac tgtgaatgtt ttcatcagtg
    16801 ccgatgcaat gccatgtata gtggattaac aaaaaccagt acggcgttgc ctcgccttgc
    16861 cgtactattt atactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat
    16921 aaaagaggcc gtctgaaaaa catttttcag acggccttgt ttattcaatc aaatcagtct
    16981 ttcaacttcg ccaactgatt ttgaactttt gccattttgt cttccaattc cgccaaatcg
    17041 gctttgtctt tttccaccag atgcgcaggg gctttttcgg tgtagccggg tttggagagt
    17101 ttggcgttga gtttgtccaa ggctttttgc agcttctcgg cttctttgct caaacgggcg
    17161 gtttccgcag ctttgtcgat ttcgactttc aacatcaggc gcgcgccgtt gcagacggcg
    17221 acgggcgcgt cttcgctttc gggtagggcg gcgacttgct gtgcttcggt caggcgggtc
    17281 atcatcggca ggtatttgag gtagtccgcc aagtcgtccg tgctttcgac aaacagcggg
    17341 gcttttacgt tgggctggat gcccatttcg ccgcgcaggt tgcggactgc gccaatcaaa
    17401 tcctgcaaca cggtcatttg ctcgaatgcc gtctgaacaa tctcgccgct gtcggcttcg
    17461 gggaagcggg cgagcatgat gctgtcggcg gttttcgcgt cgcacatagg agcgacggtt
    17521 tgccacagtt cttcggtgat gaacgggata atcgggtgca gcaggcgcag ggcggcttcg
    17581 agtacgcgca ataaggtatg gcgtgtggcg cgttggcggc tggcgcagcc ggtttgaagc
    17641 tgcactttgg cgagttccaa ataccagtcg caatagtcgt tccatacgaa gctgtacagg
    17701 gtttccgccg ccaaatcaaa gcggtaggtt tcgtaggctt gcgtaacctg ttcgatggtc
    17761 tgattcagac ggcctacaat ccacatatcg gggaaggagt agccgcgcgg ttcggcagcg
    17821 gttgcgccgt aaccgcagtc ttggttttcg gtgttcatca agacgaagtt ggtggcgttc
    17881 cagattttgt tgcagaagtt gcggtagcct tcggcgcgtt tgaagtcgaa gttgaccgaa
    17941 cgccccaagc tggcgtagct cgccatagtg aagcgcaaag cgtccgcgcc catactcgga
    18001 atgccttcgg ggaagagttt tttcgtggct tcttccactt tcggcgcagt ttcgggtttg
    18061 cgcaggccgg tggtacgttt caccagcagt ttgtccaagt cgataccgtc aatcaaatcg
    18121 acggggtcga tgacgttgcc ttcggatttg gacatttttt tgccttcgtg gtcgcgcacg
    18181 atgccgtgga tgtacacgtc tttaaacggt actttgccgg tgaagtgggt ggtcatcata
    18241 atcatacgcg ccacccagaa gaagatgatt tcgtagcctg ttaccaagac gttggacggc
    18301 aggaaggctt tgagttcgtc ggtttcagac ggccagccga gcgtggagaa cggcacgagc
    18361 gcggaggaga accatgtgtc taatacgtct tcttcgcggg tcaaaccggt tttgccggct
    18421 tgtttttcgg cttccgcctg attgcgggcg acgtaaacat tgcctgcttc gtcataccac
    18481 gcaggaattt gatggcccca ccacagttgg cgcgagatac accagtcttg gatgttgttc
    18541 atccattggt tgtaagtgtt gacccagttt tcggggataa agcgtaccgt gccgctgtcg
    18601 acggcttttt tggctttgtc ggcgaggctc aagcctttga attcgctgtc aggctcgccg
    18661 ccgttcggtg tggcggacat ggcgacaaac cattggctgg tcagcatcgg ctcaatcacc
    18721 gaaccggtac ggtcgccttt cggcgtcatc agcgtgtgcg ctttgatttc gaccaagaaa
    18781 ccttgttcct gcaaatcggc aaccatttgt ttgcgcgcgg caaagcggtc caagcctgcg
    18841 tatttttcag gcagggcaaa gcttggttgc gcttcgcctt tgaagttgaa cacttcggcg
    18901 tttgccaata ctttggcttc caagtcgaac acattaacca agcgcgtatc gtggcgtttg
    18961 ccgacttcgt agtcgttgaa gtcgtgcgca ggcgtgattt tcacgcagcc ggtgccgaag
    19021 tctttttcaa cgtattcgtc ggcaatcacg ggaatggtgc ggccggtcag cggcaggatt
    19081 aattctttgc cgattaagtg ggtataacgt tcgtcttcgg gattgacggc aacggcaacg
    19141 tcgcccaaca gcgtttcggg acgggtggtg gcgacgatga cggcttcggc aggattgtcc
    19201 gccagcggat agcggatgtg ccacatagag ccttgttctt ccacgctttc cacttccaaa
    19261 tcagacactg cggtacccaa taccggatcc cagttcacca agcgtttgcc gcgataaatc
    19321 aagccctgtt catacaggcg tacgaacact tcggttacgg tttcggcgcg tacatcgtcc
    19381 attgtgaaat actcgcgcgt ccagtcggca gaacagccca cacggcgcat ctgctgcgta
    19441 atcgtgccgc cggaaacttc tttccattcc cacacttttt ccaagaattt ttcacgaccc
    19501 aagtcatgac gggacacgtt ttgcgcggca agctgacgct cgaccacgat ttgcgtggcg
    19561 atgcccgcgt ggtcggtgcc gggaatccag gcggtgttgc agcctttcat acggtagtag
    19621 cgggtcaggc cgtccataat ggtttggttg aaggcatgac ccatgtgcag cgtgccggtt
    19681 acattgggcg gcggcagttg gatggaaaaa gacggtttgg tcaaatccat atcaggttgg
    19741 aaatagccct gctcttccca gttttgataa tgtttggatt cgatttcggc gggggagtat
    19801 ttgtctaaca tgatggaact ttgtgaaatt aaggttattt ttgatgtgcg gattataacg
    19861 caaaaaggcc gtctgaatca tttcagacgg cctttggcat acaggtttta aaaatggaac
    19921 aataccaggc tgacggcaat caccgccatg cccattgtca ggccgtaaac ggtttcatgg
    19981 ccgtctgaat agcgtttggc agccggcagc agctcgtcca acgccaaaaa caccatcaca
    20041 ccggctatca cgccgaatac cgaaccaaac acggcaggcg acaaaaacgg ctgcaaaacc
    20101 aaatagccca aagccgcccc caacggctcg gccaagccgg atagcagaca cgcccacacc
    20161 gttttcttac ggctgcgggt ggcaaaataa accggcgcgg cgatggaaat gccctccgga
    20221 atattatgga tggcaatcgc caaggccaaa ggcatcccga ctgctggatt ttccaatgtg
    20281 gcaaaaaacg tcgccaagcc ttcggggaaa ttgtgcgcag taatcgcaaa cgccgccatc
    20341 atgccgactc gcgcgatatg gcggcgtttg ctttcttgaa acgacgggtc ttgcgcgtct
    20401 aaagtttcat gcgggttcgg caccagacgg tcaatcagcg caatgccgcc catccctgcc
    20461 aaaaatgcca tggtcgccgc cgcaaacgcg tggtctttat cataaatttc agcgaacgcc
    20521 tcgctggact tactgaaaat ctccgtcagg gaaacataca ccatcgcacc gccggcaaat
    20581 gccaaaccaa acgacaacac gcgcggattg ggcgttttgg aaaacatcac caagccgctg
    20641 cctaatacgg taaacaaacc ggcagccaac gtaatggaaa aggcaacggc caaattggac
    20701 atcgaaaaat cgggcatggg aaaacctgcg ctaaaagctg ggacaggttc agactaacac
    20761 tttttaatgc gtatgataat agttattatt tattttattg attggatacc cgaattttga
    20821 aacaaaaggc cgtctgaaaa atgattttca gacggccttt aaatttgaaa tgtcgctaaa
    20881 ccttatcgct ttccagctta agcctgatag tgcgacaggc tcaaatcgtc gcttcggatt
    20941 tcggtgtctt tgccgctcac gatatcggcg gttaattttg ccgaacccag cgacatggtc
    21001 cagcccaaag tgccgtggcc tgtattcaag aataagtttt caaagcgggt gcggccgatt
    21061 aacggcgtgc tgtcgggcgt catcggtctg aggccgctcc agaacaatgc ttggctcaaa
    21121 tcgccgcctt ccgggaacaa atcgttgacg accaaagcca aggtttcgcg gcgtttttcg
    21181 ggcagtttga tttcgtagcc cgacaattct gccatgccgc cgacgcggat tctgttgtca
    21241 aagcgcgtga tagcgacttt gtagctttca tccaaaacgg tggacaccgg cgcgccgtct
    21301 gaattggtga ccggcagggt caaggaatag cctttgacgg gataaatcgg cagatcgagg
    21361 tctaactgcg ccaacacagt cctactgaag cagccgagcg cacagacaac ggcatctgct
    21421 tcaaaccgcc ctgtttcggt ttcaacggct ttgatgcgca gcccgttatg gtcgatgcgg
    21481 ctgatggttt ggttgaaatg aaactgtacg cccttttcct gacacaattt gtataggttt
    21541 tcagtgaaga ggtggcagtc gccggtcgca tctgcaggca ggtgcaggcc gccggcaatt
    21601 ttggcggtaa cgcgtgccag cgcaggctca aattctgcac attcttcggg tttcagacgg
    21661 cggtacggca cgccgtagcg ttccaaaacg gcaatgtctt gttttgccgc ttcgacttct
    21721 ttggtttggc ggaaaacctg caacgtccct tttttgcgtc cctcaaaatt catgccggtt
    21781 tgcgcttcaa aacggcggaa catttcacgg ctgtattcgg acatcctgac catgcgctct
    21841 ttattggttt gatagtgcgc tgccgtgcag ttttgcagca tttgccacag ccattcgatt
    21901 tgatacaggc tgccgtcggg gcgaaacagc aaaggcggat ggcttttaaa cagccatttc
    21961 agcgctttgg tcgggatacc gggtgcagcc caaggcgtgg tatagccgta agaaagctgg
    22021 cctgcgttgg caaaactggt ttccatcgcc acaccctcgg cgcggtcgat gaccgttact
    22081 tcatgtcctg cctctgccag ataccacgcg gaagacacgc cggcaacacc cgcacctaaa
    22141 acaagcactt tcatgtttct ccctccggct ttttcaaaac agacttaata tgccgtgccg
    22201 tctgaatatt cggattcaga cggcctcgga tattaatgcg gcaattcgcc gtttgtgatt
    22261 ttttgtttga agtcgcgcgt ttcattgacg atgactttcg ccatcaataa aagtgcaatc
    22321 aggttgggca atgccatcaa gccgttgaat gtgtccgaag ccagccacac caaatcaagg
    22381 ctcaacacgg tacccagcat aacggaagaa acataaccga cgcggtacaa accggcaaat
    22441 ttctcgccga aaacatacac cgcgcatttt tcgccgtaat agcaccagcc gagaatggtt
    22501 gagtaggcaa agaaaatcag gccgatggtg acaatccagc cgccgatgcc gggcagcatt
    22561 ttttggaatg tgacggttgt cagtgccgcg ccgctcactt caggtttgac aaactcgccg
    22621 cccgcgccga gcagtcccat taccaacacg atgccggtaa tcgagcaaac gacgatggta
    22681 tccaaaaacg taccggtcat agaaaccaag gcctgacgga cgggatggtc ggttttcgcg
    22741 gctgcggcgg caataggcgc agaacccata cccgcctcat tggagaacac gccgcgcgcc
    22801 acgccgtagc ggatgaccgt accgatagcg ccgcccgcca ctgcctgcgc gctgaacgca
    22861 tcggagaaaa ttagcttgac ggcaggcatc agtgcatcgg aattaatcgc gataatggaa
    22921 agaccgccca acacataaaa caccgccata gcaggcacga tgaaagaagc ggctttggcg
    22981 atgcctttaa taccacctaa aacgacaacg gcagtcagaa cggtcaacgt aatgccggta
    23041 taggcaggtt cgataccgaa gctggtttgc accgcctgtg caaccgagtt ggactgcacc
    23101 gagctgccga taccgaagga agcgaatgtg ccgaacagcg caaatgcaac ggccatccat
    23161 ttccagtttt tgcccaagcc tttttcgatg taatacatcg ggccgccgga catttcgcct
    23221 ttggaattgt tgacgcggta tttcaccgcc aacacgcctt cgccgtattt ggtggccatg
    23281 ccgaaaatgg cggtcatcca catccaaaat accgcgcccg ggccgccggt taccaccgca
    23341 gtcgccacgc cggcgatgtt acccgtaccg atggtggcgg acagcgcggt catcaacgcc
    23401 gcaaaatggg aaatatcgcc ttcgtggcct tcgccgcctt catacttctt tgacggcaca
    23461 aacgcctgtt tcagcgcata gcccaacata gtgaactgta agcctttcag cataacggtc
    23521 agcacaatgc cggtgccgac cagcagcatc aacataacag atccccagac ccagccgctg
    23581 acggtttcga aaaaggcttt gagattgtct aaaaacaatt gcatggcttt ctcctttgtc
    23641 t
//
LOCUS       DAXHRP010000011        23348 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.011, whole genome shotgun sequence.
ACCESSION   DAXHRP010000011 DAXHRP010000000
VERSION     DAXHRP010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.011"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(15..236)
                     /locus_tag="ACFM72_000353"
     CDS             complement(15..236)
                     /locus_tag="ACFM72_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256987.1"
                     /translation="MPFGRVGFSPPKQQQAATTVKQRQAGRWAEAHPTASGNRPAFRH
                     SVWKPENMAADAQNKEKKPIEMIQTASVG"
     gene            complement(223..783)
                     /locus_tag="ACFM72_000354"
     CDS             complement(223..783)
                     /locus_tag="ACFM72_000354"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC6256988.1"
                     /translation="MVWKTLGEIAEYSKNRICSDKLNEHNYVGVDNLLQNREGKKLSG
                     YVPSEGKMTEYIANDILIGNIRPYLKKIWQADCTGGTNGDVLVIRVTDEKVNPKYLYQ
                     VLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIPIPPLPEQEKIVAILDKFDTLTHSV
                     SEGLPYEIALRRKQYEYYREQLLAFR"
     gene            complement(809..1560)
                     /locus_tag="ACFM72_000355"
                     /pseudo
     CDS             complement(809..1560)
                     /locus_tag="ACFM72_000355"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(1532..1615)
                     /locus_tag="ACFM72_000356"
                     /pseudo
     CDS             complement(1532..1615)
                     /locus_tag="ACFM72_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-damage-inducible D domain protein"
     gene            complement(1732..3273)
                     /locus_tag="ACFM72_000357"
     CDS             complement(1732..3273)
                     /locus_tag="ACFM72_000357"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HFC6256989.1"
                     /translation="MTEIQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFIS
                     ENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNVAAKAHQNEE
                     LNTNLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGVA
                     ELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKV
                     NKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNQFH
                     IELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKAD
                     FAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFYG
                     TGIAVNILVLSKHKDNTDIQFIDASGFFKKETNNNVLTEEHIADIVKLFADKADVPHI
                     AQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEIGETVAKIERLRREIDEVI
                     AEIEA"
     gene            complement(3350..4354)
                     /gene="rfaD"
                     /locus_tag="ACFM72_000358"
     CDS             complement(3350..4354)
                     /gene="rfaD"
                     /locus_tag="ACFM72_000358"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HFC6256990.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMDNNYQYTLDL
                     LDWCQDKRIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYKEEFFDVKSGVDRYVKWMLENLA
                     "
     gene            complement(4395..5514)
                     /locus_tag="ACFM72_000359"
                     /pseudo
     CDS             complement(4395..5514)
                     /locus_tag="ACFM72_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            complement(5516..6751)
                     /locus_tag="ACFM72_000360"
     CDS             complement(5516..6751)
                     /locus_tag="ACFM72_000360"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC6256991.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGAKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(6788..7759)
                     /gene="hldA"
                     /locus_tag="ACFM72_000361"
     CDS             complement(6788..7759)
                     /gene="hldA"
                     /locus_tag="ACFM72_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HFC6256992.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(7814..8554)
                     /gene="pyrF"
                     /locus_tag="ACFM72_000362"
     CDS             complement(7814..8554)
                     /gene="pyrF"
                     /locus_tag="ACFM72_000362"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HFC6256993.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(9080..9727)
                     /gene="adk"
                     /locus_tag="ACFM72_000363"
     CDS             complement(9080..9727)
                     /gene="adk"
                     /locus_tag="ACFM72_000363"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HFC6256994.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQAVEAVKAEVLGALGK"
     gene            9943..10782
                     /gene="htpX"
                     /locus_tag="ACFM72_000364"
     CDS             9943..10782
                     /gene="htpX"
                     /locus_tag="ACFM72_000364"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HFC6256995.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(11083..11643)
                     /locus_tag="ACFM72_000365"
     CDS             complement(11083..11643)
                     /locus_tag="ACFM72_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6256996.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(11757..11954)
                     /locus_tag="ACFM72_000366"
     CDS             complement(11757..11954)
                     /locus_tag="ACFM72_000366"
                     /inference="COORDINATES: protein motif:HMM:NF019096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUMOD1 domain-containing DNA-binding protein"
                     /protein_id="HFC6256997.1"
                     /translation="MKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALNTPYGSIR
                     TKLDGRSNPDNLVCNRYKVLL"
     gene            complement(11976..12149)
                     /locus_tag="ACFM72_000367"
                     /pseudo
     CDS             complement(11976..12149)
                     /locus_tag="ACFM72_000367"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
     gene            complement(12357..12749)
                     /locus_tag="ACFM72_000368"
     CDS             complement(12357..12749)
                     /locus_tag="ACFM72_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HFC6256998.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(12866..13276)
                     /locus_tag="ACFM72_000369"
     CDS             complement(12866..13276)
                     /locus_tag="ACFM72_000369"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HFC6256999.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(13290..13673)
                     /locus_tag="ACFM72_000370"
     CDS             complement(13290..13673)
                     /locus_tag="ACFM72_000370"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HFC6257000.1"
                     /translation="MPKSLSLQDVQLRFSSKFPDKTVLKFTKNYEPVTIQCPLHGSVV
                     YGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGEIYEFASTLAASKFIGCSN
                     STLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(14138..15436)
                     /locus_tag="ACFM72_000371"
     CDS             complement(14138..15436)
                     /locus_tag="ACFM72_000371"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HFC6257001.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGVGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGWRESTFGVKDYGA
                     LPENAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(15540..16691)
                     /locus_tag="ACFM72_000372"
     CDS             complement(15540..16691)
                     /locus_tag="ACFM72_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HFC6257002.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGAVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAIERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVVDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            17026..18405
                     /gene="norM"
                     /locus_tag="ACFM72_000373"
     CDS             17026..18405
                     /gene="norM"
                     /locus_tag="ACFM72_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HFC6257003.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFIDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGTVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            18480..19520
                     /gene="murB"
                     /locus_tag="ACFM72_000374"
     CDS             18480..19520
                     /gene="murB"
                     /locus_tag="ACFM72_000374"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HFC6257004.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLCDIVRLPEFD
                     RDTVLWLGGGSNILLMQDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHT
                     VALGLSGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVELANADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVIGAEKAAALLEQHPDMPHYPQPDGSVKLAA
                     GWLIEQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            19532..20182
                     /locus_tag="ACFM72_000375"
     CDS             19532..20182
                     /locus_tag="ACFM72_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HFC6257005.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            20237..21034
                     /locus_tag="ACFM72_000376"
     CDS             20237..21034
                     /locus_tag="ACFM72_000376"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC6257006.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAVKRSLTSDDI
                     NLPIHLDTIDLNQDSAFQSANLARDTSFWRHHANKPVWFCLLPPSSLTHYADTVKQWA
                     ELARACNVQHLIFTSSTSVYGDTARECDEIALPDPQTESARQILAAEQHLLDSGVPNI
                     DILRLGGLYCAERHPVGRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKN
                     IIEPRHPTRREFYTEEAAKLGLPAPDFAPDDSVGKIIRTVCDNGLSL"
     gene            21085..21651
                     /locus_tag="ACFM72_000377"
     CDS             21085..21651
                     /locus_tag="ACFM72_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HFC6257007.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            21671..22561
                     /locus_tag="ACFM72_000378"
     CDS             21671..22561
                     /locus_tag="ACFM72_000378"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HFC6257008.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            22586..23344
                     /locus_tag="ACFM72_000379"
     CDS             22586..23344
                     /locus_tag="ACFM72_000379"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC6257009.1"
                     /translation="MNPKISSDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NHWEGDTGRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
BASE COUNT         5522 a         6070 c         5664 g         6092 t
ORIGIN      
        1 tttgtctgcg acttctaccc caccgatgcc gtctgaatca tctcaatcgg ttttttctct
       61 ttgttttgag catccgccgc catattttcc ggtttccaca cgctgtggcg gaatgcgggg
      121 cggttgccgc tcgccgtagg gtgggcttca gcccaccgcc ccgcctgccg ttgttttact
      181 gttgttgcag cttgctgctg tttcggtggg ctgaagccca ccctaccgaa aggcaagcag
      241 ctgttcgcgg taatattcgt attgtttgcg gcgcagggcg atttcgtacg gcaggccttc
      301 gctgacggag tgggtcaggg tgtcgaattt gtctaggatg gcgacgattt tttcctgttc
      361 ggggagtggt gggatgggga ttttatattg cataatcgct gctttgctgc cacgcggcat
      421 ttttgcacct ttggcgtgct tcatattaaa ggcaaaaaat ttatcatcgg ccaatacctg
      481 atacagatat tttggattaa ccttttcatc tgttacccgg ataaccaaaa catcaccgtt
      541 tgttccgccc gtgcagtctg cctgccagat ttttttcaaa tacggacgaa tatttccaat
      601 caagatgtca ttggcaatat attctgtcat ttttccctca cttggaacat aaccggataa
      661 ctttttacct tctctatttt gtaagagatt atccacgccc acgtaattat gttcgttcag
      721 tttatccgaa caaatacggt tttttgaata ttcggcaatc tcccccaacg tcttccaaac
      781 cacatctttc agacggcatt gatagccatc agctatcccc cccgatttga ttgtcaaaat
      841 ctaaaagaaa gtcgcggtaa taccggtatt ggcgtttgcg cagggctaat tccgcttcca
      901 gcgtagcttc cagctcggtg aatttgtcaa gtatttttac aattttttgt tgggtttcta
      961 ggggcgggat gggaataagt aagttttgca attcactttt agcaagtgct ggtatacctg
     1021 ctccgtattg acattgcatg aatgtaattt gcttcatttt taaaaataat atgcaaaccg
     1081 ttgcaatagt ttgtcttcgt tcgctttaat agtatatgcg tgagctcctg caaaaaaagg
     1141 gatatccatc caattaacaa accccgcact tgctcctcct tggctaataa caatcgtgcc
     1201 agcttcgtta ttgtattcat gccaataacc tgatggatta ataccgccat tgattacggg
     1261 atacttatct ttttctctaa gtagtgattt attaagctgc tttccctttc ctatacttgc
     1321 cacttccccc aacggcttcc actccaccgg tgccgtctga atcatctcaa tcaatttttt
     1381 cgctttactt tgtatatcca tggttgtttt ccgtttcttt cccgctgcgg cgggatgtgg
     1441 ggcggttatc cgccgtaggg tgggctccag cccaacaatc cgcctgctgt tttgccgttg
     1501 tttcgggggg ctgaagccca ccctactttg tctgcaaggt gcacaccgac caatattcat
     1561 tgcctgtttc gtcgatgtgt ttggcgtttt caaaagcgtt gttttctgtt gtcatgtatt
     1621 tttccccgaa aatttcttga tttgaacttg taaagattac ttacaggtta ccgcccgtat
     1681 tttcagacgg cctctttccc attcagttgt tgcaaaatat gcaacaactg cctaggcctc
     1741 aatctctgca atcacttcgt caatttcgcg ccgcagccgt tcgattttgg cgacggtttc
     1801 gccgatttcg gcgttaagct gtttgatgtc gataatttcg cgtgtgtctt cgggttcaac
     1861 atagctgctg acggcgaggt tgtagccgtt gtctttgacg gtttgctggg cggcgttttg
     1921 ggcgatatgc ggcacatcgg ctttgtcggc gaagagtttg acgatgtcgg caatgtgttc
     1981 ttcggttaag acgttgttgt tggtttcttt tttaaagaag ccgcttgcgt cgataaattg
     2041 gatgtcggta ttgtctttgt gtttggacaa aaccaggata ttgacggcga tgccggtgcc
     2101 gtaaaagaga ttgggcgcaa gggcaatcac ggtttccacg tagttgccct ccaccagata
     2161 ttggcggatt ttttgctctg cgccgccgcg atagaaaatg ccggggaatg agacgatggc
     2221 ggcgcggcct ctgccggaaa ggtagttcag tgcgtgcagg atgaaggcaa aatcggcttt
     2281 ggatttcggg gcaagtacgc ctgcgggggc aaagcggtcg tcgttgatta aggtggggtc
     2341 gtcgctgcct atccagttga tggaataagg cggattggaa acgatggcat caaagggttt
     2401 gctgtctttg agctttgggt tggtcagtgt gtcgcccaat tcgatgtgga attggttgta
     2461 attgacgttg tgcaggaaca tgttcatgcg ggcgaggttg taggtggtgt ggttgatttc
     2521 ctgcccgaag aagccttctt cgatgatgtg ctcgtcaaac tgttttttcg cctgcaagag
     2581 caggctgccc gagccgcaag ctgggtcgta gattttgttg actttctcct gcccgtgcac
     2641 cgccagccgc gcaatcagct tggatacgct ttgcggggtg aaaaattcgc cgccggattt
     2701 gcctgcgttg gcggcgtagt tggaaatcag gtattcgtag gcatcgccga aaaggtcgat
     2761 gtggtggtct tcaaaactgc cgaaatcaag ttccgccacg cctttgagga cggcggcaag
     2821 gcgtttgttc ttgtcggcaa cggtgctgcc gagccggctg ctggtggtgt cgaagtcgtc
     2881 aaacaggcct ttgatgtctt gttcggacgg atagccggag gcggagcttt caatcgcggt
     2941 aaagatttct ttcagattgg tgttgagttc ttcgttttga tgggctttgg cggcgacatt
     3001 gcaaaaaagc tggccggggt agatgaaata gcctttaact ttgacggcat cgtctttgat
     3061 ttcgggcgtg atgatgctgt ccggcatagc ggcgtaatca atactgctgt cgcctgcctg
     3121 catatagtcg gtgaagtttt cgctgataaa gcggtagaaa agtgtgccga gaacatattg
     3181 tttaaagtcc cagccgtcca ccgcaccacg tacttcgtcc gcgattttcc agatttggcg
     3241 gtgcagttgg gcgcgttgtt gtatttcggt cataatcgaa atctatataa aagttaaaca
     3301 aatcaaaatc gcctgatatt ttcagacgat ttttttacgg gcattcaaat taagccaaat
     3361 tttccagcat ccatttgacg tagcggtcga cgcctgattt gacatcgaaa aattcttcct
     3421 tatatccggc ttcgcgcaat ttggtgatgt cggcttgggt gaagctttgg tatttgcctt
     3481 tgagtgcgtc ggggaagggg atgtagcgga taagttcttc ttctaccagc tctttcaagc
     3541 tcatttcggg tttgccttcg gcggcgcggc aggcgttgac ggtggcggcg gctagttcgt
     3601 tgaactgttg gctgcggccg gtgccgagat tgtagatgcc ggaaagttcg ggatggtcga
     3661 agaagtagag gttgactttg gcaacgtctt cgacgctgac gaagtcgcgg gtttgttcgc
     3721 cgttgccgta gccgtcgttg ctgccgaaca ggttgacgta accgtgttcg cggtattggt
     3781 ggaaatggtg gaaggcgaca gatgccatgc ggcctttgtg ttgttcgtgt tgtccgtaaa
     3841 cattgaagta gcggaagccg acgacttggg cggtgagacc ttctttcatg cggcgacgca
     3901 atacttggtc gaacaggaat ttggagtagc cgtacacgtt gagcggtttt tcgagttcgc
     3961 gctcttcgcg gaagatttct cctttgccgt aaaccgccgc actggaggca taaaggaaag
     4021 ggatgcgttt gtcctgacac cagtccagca aatccagcgt gtactggtag ttgttgtcca
     4081 tcatatacaa accgtcgtgg ttcatcgtat cggaacacgc gccttgatgg aaaacggctt
     4141 cgatgttttg ataaggtaaa atgtgttccc tcacttggcg gatgaattcg tgtttatcga
     4201 gataatgggc gatttcacac tcggcaaggt ttttgaattt ttcgcctttg ctcaaattat
     4261 cgacggcgac gatgtcggta ataccgcgtt gattaagtgc tttgacgatg ttgctgccga
     4321 taaagccggc cgcgcctgtt acaatgatgg tcatattggg tttcctttgt tttgagtaaa
     4381 attaataaac ttagttacaa gaaatcatcg atattgtcct gaaacacaaa tttgcgatga
     4441 tattccaaat atttttctct tccttcggga tatattctca tcttaatttt ttgcatttgg
     4501 attgatatta agtttttccc atgtgtaacg gcttagtcga gtaccgcaaa tcaaacgacc
     4561 atcatccaag aaagtaatat aaccttgatc gaacaaccaa tcataagtcg gcgttaaagc
     4621 taacccattt aaataatcta atgcctcttt ctcatttttc tcagtaatac aaaccatata
     4681 aggtttaata tgactagccc ttaacaaaat ctcatctgta attaatgtaa atggacattg
     4741 cgacatatga tttataacat ccttgcgata tttctgctgc ccttttctac ttttctgttt
     4801 aatgatttct tgctctacga attgattaaa ttctgaagcc ggtatttcta atttttctct
     4861 tgataagagt tgcgggtgca cgatagagcg aaattgataa tccaaaaata ttcggaaata
     4921 aaataatggt tctgaatctt ctatatcttt gacaggcaat agtttaagaa ttgataaata
     4981 actaattttg ggcaatacaa tcttacgcca aattgaccat atatcatcct ccgaacggat
     5041 ataaccccta cggtaacctt tagaattttc caaatggtct gatacatcat ggattgaaaa
     5101 gaaaatattt tctgtaggca gattattaat acttaaaacg taatcatcat aaaaccttga
     5161 aatatcatga tgatatttct gttcttgttt gtgatattca acttttgcat caaccaaata
     5221 acgctgtaaa tttttcttat aaaaaaaaca atttttctga atgaaaggat attctaccct
     5281 ccttccattt tttgtctcag taatccccca attttcatac tcaaaaaatg tacttagttt
     5341 tcgaccacta tcatcaatat aactacctac atatttgcgt gcttccccat taccaccaaa
     5401 aacagataac ttgttattcc tgtgaataaa actatcttcc gcacgtaaat tttgaatact
     5461 atcgacaata aaatactcta tgttttcaat agtaattctt tgaaaatccg gcattttact
     5521 ctccataaag cgtaatatcc atttgtttta atatagcgat taatacatca acaacaatac
     5581 tgtttcccgc ttggcgatac atttgagtat cactaactaa aattttaaaa tcatctctaa
     5641 aacccattag ccgcaaacat tccctaggtg ttaatttacg aatacgtcca cgattatgag
     5701 taacataatt atcaaccccg gcacgatgca ttttatgcat agtttgcaat aatgggcgag
     5761 ctacaggcaa atcagtttcc gtactggttt taaaattttt tgttcctcct gccaaaacat
     5821 aatttttgat tttttcagaa agataatatt tttcctcaac gttatttaca tcaaaaataa
     5881 agtcatcaaa ttcagattcg cgggctgcct gaaaaataaa atcaccatgc caattaaatt
     5941 gttgatttgc tttttggcat aaggcaattt ctccattaat ctgtgtataa cgtttttgtc
     6001 tatttttaga actggtaaca aatttcgcac ccttttcacg taaaaaatat ttgctatcag
     6061 tatagtcctc caaaaaatct tgcatagtat gttctaattc aatcttttca ggaaactgaa
     6121 aaccatttat aggaggggta tgaaagccaa caacaaaaat acgctcacga tgttgaggaa
     6181 tcccataatc cttactattc attatttgga aatataagtc ataaccaagt gaataaaaaa
     6241 cactttttac aactttccaa gtttttccat tatcatgatt aagcaagccc tttacatttt
     6301 cataaataaa tatctttggt tggacttcat ccacaacgcg agcaaattca tagaataatg
     6361 ttcctcgtgt atcttctaat cctgcacgtt tgccaaccat ggaaaatgct tggcaaggac
     6421 tgcctccaac taaaatatca acttgatttc taaactttct cgcatcaaat tgagtaatgt
     6481 cgttatgcca aaaatcttca tttaatttat agtttccaag ataacttttt ttaacgtatg
     6541 gatcaatatc tcctgaaaaa acaatggtat ggtttaaatt taatcggtgg aatgcctgtt
     6601 caaccgcacc aatcccgctg aatacggttg ctaatctaat atgtgaatca ggtttaagaa
     6661 aagttttaga tttccaacct tgttgactgg gaaagagcaa agttttttgt aatcgagtat
     6721 cgtgtgtctg tgccattgtc gaaatagtca tacttatatc gttctgttta tcttatcaat
     6781 atgaaaacta cattgttgat tgccctgaca atgccttgat caattcggca aacgagcaaa
     6841 ccgccgtacc gagtttcgcc acgacaaccc cggccgcagt attggcaagg tacatggctt
     6901 cgggcatggt gcagcctgcc gccaaaccca agcccattcc ggcaatgacg gtgtcgcccg
     6961 caccggatac gtcgtaaact tcttgggcgc gggtgggctg gtaaatcggt tcgccttcgc
     7021 tgaacaaggt catgccttct tcgcttcggg tcagtaaaac ggcggtcagg tcgaggtggc
     7081 ggcgcaggtt ttgcgctttt tcggtcagct cgctttcgtt tttccaactg ccgaccactt
     7141 ctttcaattc ggcgcggtta ggcgtaatca gagttgcacc gacatatttt tcgtaatcgt
     7201 cgcctttggg gtcgattaag acggttttgc cggcgtgttt cgcccaatcg atcatatcgg
     7261 agatatgcga caggccgcct ttgccgtagt ctgaaaaaat gattgcgtcg tattcgggca
     7321 agatttcgcg gtatttctgc ttgatttgtt ccaacacttc gcagttggga tgttcttcaa
     7381 aatcaagacg gataagctgc tggttgcggg cgacgacgcg cagtttgacg gtggtggcga
     7441 tttgtttgtc gcgcatcaga taggaggcga cgccgtcctg caccatcagc gcatcgagcg
     7501 cgtcggcggc ttcgtcgttg ccggttacgg acaacagccc tgccctgccg cccaacgaag
     7561 cgatgttgcg cgcgacattt gccgctccgc ccgcgcgttg gtcgattcgt ccgattttcg
     7621 ccaccggcac gggggcttcg ggcgaaatac gggacacatc gccgaaccaa tagcggtcga
     7681 gcatcacgtc gccgacaacc aggactttgg cttgcgcgaa acgggatttg agggtttctt
     7741 gttggaactt ggcggacata ttgcctccgt tgtatttttt cagacggcct cagcctgtaa
     7801 ggccgtctga aaatcagttt gcttcaaggt ttgccacgcg gttcacttcg cgcaatacgg
     7861 ctaccggatc ggcagcttgg gttacaggac gacccattac caaataagtc gaaccggcag
     7921 ccaaggcttc ggccggtgtc atgatgcggc gctggtcatc attattgccg gcaacgtcca
     7981 agcggatgcc gggcgtgacc aagacaaaat cctgtcccaa ttcgcggcgc agcggcgcgg
     8041 cttcttgggc ggaacagacc acgccgtcca agcccgaact ttgcgccagt tttgccaagc
     8101 ggatgacttg ttcttcaggg gcggtgttca aaccgatttc cgccaaatca ctttgttcca
     8161 tgctggtcaa cacggttacg ccgattaaga gcggcttcgt gccgtatccg gcaacggctt
     8221 ctgctgcggc ttccatcata cggcggccgc ccgatgcgtg catatcgacc atccaaacgc
     8281 ccatatcggc agcgactttg caggcttgcg cgacggtgtg gggaatatcg tggtatttca
     8341 aatcgaggaa aagtttgaaa ccttgattga ttaagctttc tgccaaattg cgtcccgtcg
     8401 cggtaaacag ctctttgccg attttgattt gacacaatgt cgggtcaagg ttgcggacga
     8461 atccgagcgt gtctttttcg ttggaaaaat caagggcgac gataacgggg gtgcgttgtt
     8521 gcggagtttg gaagtcggag attaaaggat tcatggtgtt ttcgtttcgg gttttcagac
     8581 gacctttatc gtctttttcg cagtatagtg gattaacttt aaaccggtac ggcgttgtct
     8641 cgccttagtt caaagagaac gcttctctaa ggtgctgaag cacaaagtga atcggttccg
     8701 tactatctgt actgcctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactataa
     8761 caacgtaaat tcaaaccgta ggtcgggcat tgatgtccga cctacgcgga ctcaagcctc
     8821 cgacaaactg tttcggataa atttgaaccg gtacatcagc cgtcattccc gcgcaggcgg
     8881 gaatccattg ataaaactca gttcatcaga tttaaacagc gattgcccaa attcagaaat
     8941 ggattcccgc ctgcgcggga atgacgccaa atgattattt ttcggttgca acacgctgtt
     9001 tatcaaaaac aggtcgtctg aaaacctgat tttctgtttt cagagtgcga agcctgcccg
     9061 tgggtacgac cttttcgatt tatttgccca atgcgcccaa tacttcggct ttcacggctt
     9121 ctactgcttg ggtgccgtca actttgatgt atttaggcgc gtgttcgcct tccagtttgc
     9181 tgtaaaaatc gaccaaaact tcggtttgct cgtggtaaac ggcaaggcgt tttttcacgg
     9241 tttcttcttt gtcgtcgtcg cgctgaatca aatcttcgcc ggttacgtcg tctttgcctt
     9301 caactttggg cgggttgtag gtaacgtggt aagtacggcc ggaagccaaa tgcacgcggc
     9361 ggccgctcat gcggtcgaca atcacgctgt caggcacatc gatttcaacg actgcatcca
     9421 aatccacgcc tgcttcaacc atcgcttcgg cttgtgccaa tgtgcgcggg aaaccgtcaa
     9481 acaagaaacc gtttttgcag tcgtcttgcg cgatgcgttc tttgaccatg ccgataatga
     9541 tgtcgtcgcg caccaagccg ccttcgtcaa tgattttttt cgcttccaaa cccaagggcg
     9601 tgcctgcctt aatcgcggca cggagcatgt cgccggtaga gatttgcgga atgccgaacg
     9661 ctgcggtgat gaattgcgcc tgagtgcctt tgcccgcgcc cggcgcgcct aaaagtaatg
     9721 ctttcatgaa gtgatccttt gaaatgtgtt tattggaatc aaacagatgg tttacgattc
     9781 tacacggctt ggcacaatag ttcaaaaacc aactgcacaa actgccattt gcaagcaaat
     9841 gttttgcata cctttgccga gtctgatatt cacaagccgg caactttttg ggacaatccc
     9901 ccaaaatttc aaaacatcac accctaccaa aaaggaacat ccgtgaaacg aatttttctg
     9961 tttttggcta ccaatatcgc tgttttggtc gtaatcaaca ttgttttggc ggttttgggc
    10021 atcaacagcc ggggcggcac gggcagcctg ttggcgtatt ccgccgtcgt cggcttcact
    10081 ggttcgatta tttcgctgct gatgtccaaa tttatcgcca aacaatcggt cggcgcggaa
    10141 gttatcgaca cgccgcgcac cgaagaagaa gcctggcttt tgaacactgt cgaagcccaa
    10201 gcgcggcaat ggaacctgaa aacgcccgaa gtcgccatct accactcccc cgaacccaat
    10261 gcctttgcca cgggcgcatc gagaaacagc tccctgatcg ccgtcagcac cggtttgctc
    10321 gaccatatga cgcgtgacga agtggaagcc gtattggcgc acgaaatggc acacgtcggc
    10381 aacggcgata tggttacgct gacgctgatt caaggcgtgg tcaatacctt tgtcgtgttc
    10441 ctgtcgcgca ttattgccaa cctgattgcc cgaaacaacg acggcagcca gtcccaggga
    10501 acttatttcc tggtcagcat ggtattccaa atcctgttcg gcttccttgc cagcttaatt
    10561 gtcatgtggt tcagccgaca acgcgaatac cgcgccgatg cgggcgcggc aaaactggtc
    10621 ggcgcgccga aaatgatttc cgccctgcaa aggctcaaag gcaacccggt cgatttgccc
    10681 gaagaaatga acgcaatggg catcgccgga gatacgcgcg actccctgct cagcacccac
    10741 ccttcgctgg acaaccgtat cgcccgcctc aaatcgcttt aaaccgattt gaaacggcaa
    10801 aaaccgtacg cgcaagcagt acggtttttt gtatatgctg tctgaaaaca tcaggtttcc
    10861 ataccgacac caaccgtatc catttccgca ccggatacgc cgcattgata taccctgata
    10921 aaccgtatcc ggacagaaaa tatagtggat taacaaaaac cagtacggcg ttgcctcgcc
    10981 ttagctcaaa gaaaacgatt ctctaaggtg ctgaagcacc aagtgaatcg gttccgtact
    11041 atttatactg tctgcggctt cgtcgccttg tcctgatttt tgttaatccc ctatatcaga
    11101 taaaacagcg gtaaaattgc cgtctgaaac caactctgcg ccatacggga cacgctctgc
    11161 acgtctattt gcctccgata tatcctccct actgtaggaa cgtctgccga tttgcacgaa
    11221 atcggcacct ctagcaccct tcaggatggc ggacgttatc cgttcttggg attctgcaag
    11281 acggtcgacg gcattataca gacgctcggt ctgataccct tccgaagcaa cctgcttcag
    11341 gtattccaaa taaccgtaac ccaacgcccc tccgacaagc agggtcgtca acgctaccag
    11401 cgttgccgaa cggattttag ggggcatatc ttgaagcata tctctaccga accgaaccaa
    11461 agtctcttta aagtcggact ctacacgcgt agaaccctcg gaaatcttga agttcaactc
    11521 atactgcttc cgtttgtccg ctgtcaaccg cttgaggttg tcatccccgt attggacggt
    11581 tgacacaacc ctgtacagac tgtcctgtat ttcgaccagc gtctgtgcaa agttggcggt
    11641 cataactgga ttcccaaccc ttgccgccga ttctgatact caaaacggta tccaggcgtt
    11701 ccagcagggc ttcgggagac agcagtgcgt attcttcaat attttccata ggttgattat
    11761 agcagaacct tatacctgtt acagacaagg ttgtcgggat ttgaacgtcc gtcgagcttg
    11821 gttcgtatag agccgtaggg ggtgtttagg gctttggcgg cagcttgtac gctggggaac
    11881 gtgagtgttt cgcctgtggc ggtgtcgagg atggagacag gtttttggtt ttggggaggc
    11941 gtattttcct tcattttaag tttcccgcac tccggacacc catactttga ctttatagct
    12001 gtgtcgtaat acaaaagttg gacaaccccg tgcgtaggac atctaacact ggaaggttta
    12061 taaatgccac tgaactccaa caattctaaa tgtggaaatt tctcttgaaa gcgtgatttg
    12121 gcggtatcga aagtcattcg cttacccata atttgtctcc ataggttatg tgcaaatgga
    12181 ttacacaacc aaaatataga aattttcaaa ttttttgaga cctacctgaa atcctgcgca
    12241 agcacaatgt aaagaaaaat ggtatacgtc tttactaaat ctttacataa attaactcta
    12301 accgggattt gaacgtccgt cgagcttggt tcgtaggatt tagggtgttg tgaaccttac
    12361 ctatcgtacc caagcacttt gtacctgttt gaaataaggt tgtcgggcga cgttcgaccc
    12421 ttgagcctgt gattgatttg ttggaaatgt acacctaaag cagcacctgc ggcagtaacg
    12481 cttgggaacg tgagtgtttc gttggtcgtt gtgtcgagga tgaggagggg cttccctaca
    12541 tttggaggtg tttgggtttt tgacatctta gcacactcag gacacccgta ctttgacttt
    12601 ataagggcat taaatgtcga ataacgaacg ttcccgtgca taggacaatt aacggttact
    12661 gggtaattca caccgtcaaa gccggttaga gagatattag ggaatatatc agtaagttca
    12721 gaagctgctt ggttgaaaga tttggccatt tgagactcca aaattgattg tcaaatggat
    12781 ttaatagcaa atttataaaa atgtcaaatt tttcgagaag cacctgatag tggcgagggg
    12841 tatacactgt taaaaagtgt atacgtcatt tagtgcagat gtgaacctta tacctccctg
    12901 caagtaaagt ctctgtgtga acccgacctt ttatacggtc agtgatagct gctgggttta
    12961 tacccaatga ccttgcagca gatgctcttg aagggaatgt aagtgtttcg ccagttacag
    13021 tatcctccaa tactgtattt ttagataatt tatctattgt atcttctgga attttgtggg
    13081 aattgacacc ataagatgca cattttggac acccactttt agagtccaac atacttttga
    13141 atgtagagca agtaaccctc ccgtgtatag gacagacgat taccgtcggg taacgaacgc
    13201 cattgaactc cacaagattc aaatgtggaa atttagaggt tagcttagaa actgcttgag
    13261 taaatgtaag tgccatagtg gttgtgaact tactttacca acctataacg atacctaatc
    13321 aatcggtcaa acggagtgcg tccgcttaaa cgtacagcta aagtgctgtt ggagcaaccg
    13381 ataaatttac tggcagccag tgtacttgca aactcgtaga tttcccctgt ctctgtgtcc
    13441 tccaacctaa tggcaacggc gtttggagag ggcttttcgg gatttcgagt acattcagga
    13501 catcctgttg aggatttcat ggcagcttgt agattcccgt aaacaaccga cccatgcaaa
    13561 gggcattgga ttgttaccgg ttcgtagttt ttagtgaact tcaaaaccgt cttatcagga
    13621 aatttactgg aaaaccttaa ctgaacatct tgtagcgaga gtgattttgg cattatagac
    13681 ctttctaaaa tgaaagcatt atacaaccaa aatatagaaa ttttcaaatt ttctctgaac
    13741 gcactggtat ccgatggagc taaatgtaaa gaaaagggta tatgtcctta ctaaatattt
    13801 acacatttta actgtatagt gtttgacaaa caacaggcat aggcgcataa tgcacccgta
    13861 gttagataga tagtaaggag ataaccaatg acttagcacc tgcccccctc tctctcgcgc
    13921 accccgcccc tcgcttgcgg ctaatgggct ttgcgcgaca tatacacttt catctcctgc
    13981 atggcttaac cgcctatgca atagtacaca catcaacaaa tcaggctggc acgtcttggc
    14041 attggctgac gtaccattgt agcccgaaat gttgataccc tactatttat gaccaacggc
    14101 ggattagggc ttcagacggc aattttactg caaaacctta tgcgaacgga tgatgcagca
    14161 caatcgtttc ttctcggtcg gggccggtgg agacgatggc gaccggcgcg ccgcagactt
    14221 cttcaatccg tttcaaatat gctttggcgt tttcgggcaa tgcgccgtag tccttcacgc
    14281 cgaaagtgga ttcgcgccag ccgggcatgg tttcgtaaat cggcttgcag gtttccaccg
    14341 catcggaacc gcaaggcagg atgtcggttt tgccgccgtc gggcaattca tagccgacgc
    14401 agatattgat ggtttcaacg ccgtccatta catcgagttt agtaatacac ataccggaaa
    14461 tgccgttgat ttggatggag cgtttcaggg cggcggcatc aaaccagccg cagcggcgtg
    14521 cgcgtccggt taccgaaccg aattcgtgtc cgcgttctgc caaacctacg cctacttcgt
    14581 cgaacaattc ggtcgggaac gggcccgaac cgacgcgcgt ggtataggct ttgacgatgc
    14641 ccaaaacata atccagcatt tgaggaccta cgcccgcgcc tgccgaagct gcgcccgcca
    14701 gacagttgga cgaggtaacg aagggataag tgccgtagtc gatgtccaac aacgcacctt
    14761 gcgcgccttc aaacagcagt ttttcgccgt ttttgttttt ctcgttcaac acgcgggaca
    14821 cgtcggtaat catcggcgca atgcgcggcg cgactttttc gataaccgcc atcacgtctt
    14881 ccgctttaac cggctcggca ttgtgcagat gttgcagttg gacgttgtaa taagcaagga
    14941 cggcatccag tttttcacgc agtttttcag gatgcagcaa atcggcggcg cgaatggcgc
    15001 ggcgtgccac tttgtcttcg taggcagggc cgatgccgcg gccggtcgtg ccgattttgc
    15061 ctttgccgcg cgatgcttct cgggcttggt cgagcgcgat gtgataaggc aggatcagcg
    15121 ggcaggtcgg cgcgattttc agacggcctt cgacgttttt cacgcctgcc gcgttcaact
    15181 cgtcgatttc gcccaacagg gcttcggggg agacgacaac gcccgaaccg atgaagcagt
    15241 ccagactttc atgcaggatg ccgctcggaa tcaggcgcaa aatggttttt ttgccgccga
    15301 caaccaaggt atgacccgca ttgtggccgc cttggaagcg caccacgccg ccggcttctt
    15361 ccgccagcca gtcaacgatt ttacctttac cctcgtcgcc ccactgtgcg ccgattacta
    15421 caacattttt agccatagcc atataaccta tcgatattaa aaattattgt gggaatcccc
    15481 aaaccggtgc ggctttgcgc cccgccacga tttgcctttc atccgccatg aacgggtatt
    15541 tagcgtttca cgacctgcca aacgccgtcc gtctttttca gacggcctgc aagctcttcc
    15601 gaaacattgt gtccgatacc gtagtcaacc acgacacact gcccttgttc acgcaaggct
    15661 tcgaccgctt cgcgcgccgc ttcggcatct tccgcatcga ccaacacggc gggctgccgt
    15721 tcgatggcgg gcaaacgccc gataaagctg cgcaagtcga aactgaatcc cgttgccggg
    15781 cgcgccctgc cgaaatatcc gcccaatccg tcataacgcc cgccgcgcgc gaccgcgtcg
    15841 tggaaatcgg cggcataggc ggcatacagc aagcccgtgt ggtaattgtc gacacgcagc
    15901 tcggacaagt cgatatggat ttcacaatcg gggaatgcgt cgcacaccgc ctgcaattcg
    15961 cccaacgcgc cgccgaccgc cgacaaatcc ggcaaccgtc cgcgcgcgtc ggacaacact
    16021 tcacgcccgc cgtacaggcg cggcaacagc gagaatgctt ttgcccacat gccgtccagc
    16081 ttccaagcct tgacctgcgc ttcgaccgcc ccggtatctt tatcctgcat caaggcaagc
    16141 agcgttgcgg actgccccgc atccaaatgt gccgcatcgg acaaggcgcg aaatatgccg
    16201 atatgcccca gcgaaagcag cactttgccc atatcggcaa ttttcatgct tttcagcata
    16261 aggtctatca gctcgatgtc gccacggatg tcggcaaaac cgtacatttc cgcccctgcc
    16321 tgcaagggtt cgcgcatatt cagcagaccg tcggactgcg cgtgcaacac cggaccggca
    16381 taacacaacc gattaatccc ttggttggcg gataaaagat gggcatcgat acgcgccacc
    16441 tgcggcgtga tgtcggcgcg tatgcccaac tgcctgccgc tgagcctgtc cgttaccaaa
    16501 atggttttca gggaaagccc cgcatcgata tgcgtcagca gggaatgtgc gtactccatc
    16561 agcggaggct gtaccagttc ataaccgtgt acgcggaaca gtgccaacaa ctgctccctc
    16621 gcgctttcaa gctgccgcgc gttcgtgggc agtacgtcgg cgatatgttc cggaagctgc
    16681 catgtctgca tgagaatctg ccttctattt tatcatgtaa atacaaaagg ctgcccgatc
    16741 cgcaatcaga cggcatcttt gccgcaacgc atcacgccgc tgtcaaaacg gcgatgcttc
    16801 cttccgattc agaatccgaa cagcccctgt ccgacggctc aatgccgtca agtcgttaaa
    16861 accaaacttt accataaaat acacacaatc tgaatatact tttataccct gtatccgccg
    16921 tctgacggca cggcattttt ttactatata atgtgcgcca ttatttctca tcacttcctg
    16981 ctgccgtttt ctgcttcaga cggcattttt gttgattgaa cacttatgct gctcgacctc
    17041 aaccgctttt ccttttccgt cttcctgaaa gaagtccgcc tgctgaccgc tcttgccctg
    17101 cccatgctgt tggcgcaggt cgcgcaggtg ggcatcggtt ttatcgatac tgtgatggcg
    17161 ggtggtgcag gcaaggaaga cttggcggcg gtggctttgg gcagcagcgc gtttgccacg
    17221 gtttatatta cctttatggg cattatggcg gcgctgaacc cgatgattgc ccagctttac
    17281 ggcgcgggta aaaccgacga agtgggcgaa acggggcggc aggggatttg gttcgggctg
    17341 tttttgggcg tgttcggcac ggtcttgatg tgggcggcga ttacgccgtt ccgcaactgg
    17401 ctgaccttga gcgattatgt ggaaggcaca atggcgcagt atatgctgtt caccagcttg
    17461 gcgatgccgg cggcaatggt acaccgcgca ctgcacgcct acgcctccag cctgaaccgc
    17521 ccgcgcctga ttatgttggt cagctttgcg gcgtttgtgt tgaacgtgcc gctgaactat
    17581 attttcgttt acggcaaatt cggtatgccc gctttgggcg gcgcaggctg cggcctggcg
    17641 acgatggcgg tgttttggtt cagcgcgctg gcattgtgga tttatatcgc caaggaaaat
    17701 ttcttccgcc cattcggact gacggcgaaa ttcggcaaac cggattgggc ggtgttcaaa
    17761 cagatttgga aaatcggcgc acccatcggg ctgtcttatt ttttggaagc cagcgcgttt
    17821 tcgtttatcg tgtttttgat tgcgcctttc ggcgaggatt atgtggcggc gcagcaggtc
    17881 ggcatcagtt tgtcggggat tctctatatg attccgcaaa gcgtcggctc ggcggggacg
    17941 gtgcgcatcg gcttttcgct tgggcggcgc gaattttcgc gggcgcgtta tatttcgggc
    18001 gtgtcactgg tgttaggatg gatgctcgcc gtgattaccg tgctttcctt ggtattattc
    18061 cgttcgccgc tggtaagtat gtacaacaat gatccggcgg ttttaagcat cgccgccacc
    18121 gtcttactgt tcgccggctt gttccaaccg gcagacttca cccaatgtat cgcctcctac
    18181 gccttgcgcg gctacaaagt tacaaaggtg ccgatgttca tccacgccgc cgccttttgg
    18241 ggctgcggtc tgctgccggg ctacctgctc gcctaccgtt tcgatatggg catttacggc
    18301 ttctggacgg cattgattgc ctcgctcacc atcgccgcca tcgccttggt gtggtgcttg
    18361 gaattgtgca gtagggagat ggtcagatcg cataaggctg tctgaaaact ccgccgatta
    18421 aaatatgaaa ctatgggctg aagcccgcca ctgacaatac ccattttaaa gttcaaacca
    18481 tgcaacccat ccgataccga accgacctca ccccctacaa caccttcggt cttcgcgccc
    18541 aagcccgagc ctttattgcg cttgaacacg ccgacgggtt gtgcgacatc gtccgactgc
    18601 ccgagttcga ccgcgatact gttttatggc tgggcggcgg cagcaacatc cttttgatgc
    18661 aggattacgc cggactggtc gtacacatgg aaaacaaagg catacgcgag attgcgcgtt
    18721 cagacggcat ggttctgatt gaagcgcagg cgggcgaaat ttggcacgat tttgtcctgc
    18781 acaccgttgc gctgggtttg agcggtttgg aaaacctgag cctgattccg ggtacggtcg
    18841 gcgcatcgcc cgtgcagaac atcggcgcat acggcgtgga ggcgaaagac gtgattcaca
    18901 gcgtgcgctg ctttgatttg gatacggaga cctttgtcga gcttgccaat gccgactgcc
    18961 gcttcgccta ccgcgaaagc ctgttcaagc aggagggtaa agggcgttat gtgattgttt
    19021 cggtcgtatt tgcattaaaa acgcattttg tgccgaactt gggttacggc gatttggcgg
    19081 ccgccgttgc cgaactgagc gcgggcaggg tgccgacggc gaaagatgtt tccgatgcag
    19141 tgtgtgcaat ccgcaacagt aaacttccta atcctaacgt gcttggtaat gtcggcagtt
    19201 tctttaaaaa tcccgtcatc ggcgcggaaa aagctgccgc cctgttggag cagcatcccg
    19261 atatgccgca ttatccgcag ccggacggtt cggtcaaact cgccgccggc tggctaatcg
    19321 agcaatgtcg tctgaaaggc ttccaaatcg gcggcgcggc ggtacatgac aggcaggctt
    19381 tggtcttagt gaacaaaaac aacgcctcgg caaacgatgt ccggcagttg gcgcaacaca
    19441 tcaaatttac agtatttgct cggtttcagg tagaattgca cgccgaaccc aattggctgc
    19501 ctgcttcgtt cagcctgtaa atccaaggag tatgcccgtg acccgccccg ccaaaatcaa
    19561 tacttacaca cgcatcatcg acgccagcct tgcgcttttc aacgaggaag gcgagcgcaa
    19621 catcagcacc aaccatattg ccgcccactt gggcatcagt ccgggcaatc tctattacca
    19681 cttccgcaac aaagacgaaa tcatcgtcca actgttcaaa cgttacagcg aagccctgct
    19741 ggaatacctc aacgaagccg tgttgccgtc tgatgtggaa gactccatca attatatggc
    19801 gggcatttac gacgtgatgt gggaataccg cttcctcttt agcgatgtaa acaccctgct
    19861 tgcccgcagt gccgaattat tgggcgaaca caacaccttc acccaagcca aagtctcccc
    19921 gctcttggtc aacctgctga cccagctcaa cggtctgaac atcatccaag ccgaccaaac
    19981 cgccatgaac gatctcgccg tcaatatgtg gatggtcacg aaatactggt tcgacttcga
    20041 cagctccctg cgcggccgca ccaagctgac cgaagactcc aaagcacgcg gcatccgccg
    20101 caccttaagc ctccttcgtc cttatctttt gcccgaacac cgcaagaaat acgaccggaa
    20161 aatcggcaac ggcaacccgt aaacccacag cgtccgaatc agccttcaga cggcacttac
    20221 ccgacggtat cagcgaatgc gcgcagtccc cccgccccat atctccatca caggcctagg
    20281 ttacctcggc ctgccgctgg cacaaaagtt ttaccaacac ggcagccgcg ttgccgccgt
    20341 caaacgcagc ctgacttcgg acgatatcaa tctgcccata cacctcgata ccatcgacct
    20401 caatcaagac agcgcgtttc aaagcgcgaa ccttgcccga gatacaagct tttggcggca
    20461 ccatgccaac aaacccgttt ggttctgcct cttgccgcca tcatcgctga cacattacgc
    20521 cgataccgtc aaacaatggg cagaacttgc ccgggcgtgc aacgtgcaac acctgatttt
    20581 cacaagcagt accagcgttt acggcgatac agcgcgcgaa tgcgacgaaa tcgccctacc
    20641 cgatccgcaa accgagtccg cccgccaaat cctcgccgcc gaacaacacc tgctcgacag
    20701 cggcgttccg aacatcgaca tcctgcggct gggcgggctt tattgcgccg aacgccatcc
    20761 cgtcggccgc cttgttcaaa agcaaaacat cccgggcggc aaccgcccca tcaacatcgt
    20821 ccaccgtaat atcgccgtcg aaagcctgtt tcagacggca tttaaccccg gcggcaggcg
    20881 gctgaaaaac attatcgaac cgcgccaccc gacacgacgc gaattctata cggaagaagc
    20941 cgccaaactc ggcttgcccg cgccggattt tgcacccgac gacagcgtgg gcaaaatcat
    21001 ccgtaccgtt tgcgataacg gcttaagcct gtaaaataag cggcaacagc aacaaacagg
    21061 cattctccgc cccgatcaga aaatatgtcc gccctcctcc ccatcatcaa ccgcctgatt
    21121 ctgcaaagcc cggacagccg ctcggaactt gccgcctttg caggcaaaac actgaccctg
    21181 aacattgccg ggctgaaact ggcgggacgc atcacggaag acggtttgct ctcggcggga
    21241 aacggctttg cagacaccga aattaccttc cgcaacagcg cggtacagaa aatcctccaa
    21301 ggaggcgaac ccggggcggg cgacatcggg ctcgaaggcg acctcatcct cggcatcgcg
    21361 gtactgtccc tgctcggcag cctgcgttcc cgcgcatcgg acgaattggc acggattttc
    21421 ggcacgcagg cagacatcgg cagccgtgcc gccgacatcg gacacggcat caaacaaatc
    21481 ggcaggaaca tcgccgaaca aatcggcgga ttttcccgcg aatccgagtc cgcaaacatc
    21541 ggcaacgaag cccttgccga ctgcctcgac gaaataagca gactgcgcga cggcgtggaa
    21601 cgcctcaacg aacgcctcga ccggctcgaa cgcgacattt ggatagacta accttcagac
    21661 ggcatccgac atgaacagcc cttttcacaa catcggcatc gtaacccgcc ccaacacgcc
    21721 cgacatccaa gacaccgcac acacgctgat tacctttttg aagcagcacg gctttaccgt
    21781 ctatctcgac gaagtcggca taaaggaagg ctgcatctat acccaagaca ccgtcggctg
    21841 ccatatcgtc aacaagaccg aactggggca atactgcgac ctggtcgccg ttttaggcgg
    21901 agacggcacc tttctctccg tcgcccgcga aatcgccctg cgcgccgttc cgattatcgg
    21961 catcaaccaa gggcatttgg gcttcctgac ccaaattccc cgcgaatata tgacggacaa
    22021 gctattgccc gttttagaag ggaaatacct tgccgaagag cgcatcctga ttgaggccgc
    22081 actcatccgc gaaggcaaaa ccgccgaacg cgccatcgcc ctcaacgatg ccgtcctctc
    22141 ccgtggcggt gccggacaga tgattgagtt tgaagtcttc gtcaatcggg aattcgtcta
    22201 tacccagcgt tcggacgggc tgattgtctc cacccccacc ggatcgaccg cctattcgct
    22261 tgccgccggc ggccccatca tgcaggcagg attacacgcc ttcacgctcg tccccatctg
    22321 cccacaatcc atgaccaacc gccccatcgc cattccagac acgtccgaaa tcgaaatcct
    22381 cgttacccaa ggcggcgacg cgcgcgtcca tttcgacggt caaacccata tcgacgtgca
    22441 aaacctcgac cgcatcacca tccgccgcta ccgaaatccc ttacgcattt tgcacccgac
    22501 cgactaccaa tatttcaaaa ccctgcgcca aaaactgcac tggggcgagc aattagtcta
    22561 agccggcctt tacccgaaag tatccatgaa tcccaaaatt tcctccgacc atacagaaga
    22621 tgccgtgcgc ctctccaaac gcatggcgca actggggctt tgttcacgcc gcgaagccga
    22681 cggctatatc gaacagggtt gggtaacggt caacggcaaa accgccgtac tcggtcagaa
    22741 agtttcaccg gcagaccgta tcgaactgaa caagaaagcc cacgaacagc aggcggcacg
    22801 cattaccatc ctgttgaaca aacccgtcgg ctatgtcagc gcacaagcgg aaaaaggcta
    22861 taaatccgcc gccgaactga ttacccctga aaatcactgg gaaggcgata ccggccgcat
    22921 ccgtttcgat ccgaaacaca aaatcggcct cgcccccgcc ggcaggctgg acatcgactc
    22981 ggtcggattg ctggtattga ctcaggacgg ccgtatcgcc aagcagctta tcggcgaaaa
    23041 cagcggcagt gaaaaagaat atttggtgcg cgtgcgcggc aaattggacg aaaaaggact
    23101 tgccttactg aatcacggat tgagtttgga cggcgagaaa ctgcgtcccg cccaagtaga
    23161 atggcaaaac gaagaccaac tgcgcttcgt gttgaaacag ggtaaaaagc ggcaaatccg
    23221 ccgtatgtgc gaactggtcg gactgcgcgt cgtcgggctg aaacgcatcc gcatgggcaa
    23281 ggtcaaactc ggcaggctgc cgcccggcaa atggcgttat ctcgctcccg gcgaatcgtt
    23341 ttaaataa
//
LOCUS       DAXHRP010000012        22733 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.012, whole genome shotgun sequence.
ACCESSION   DAXHRP010000012 DAXHRP010000000
VERSION     DAXHRP010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.012"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..99
                     /locus_tag="ACFM72_000380"
                     /pseudo
     CDS             1..99
                     /locus_tag="ACFM72_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(120..1034)
                     /locus_tag="ACFM72_000381"
     CDS             complement(120..1034)
                     /locus_tag="ACFM72_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC6257010.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1302..2771
                     /locus_tag="ACFM72_000382"
     CDS             1302..2771
                     /locus_tag="ACFM72_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HFC6257011.1"
                     /translation="MDKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3023..3394
                     /locus_tag="ACFM72_000383"
     CDS             3023..3394
                     /locus_tag="ACFM72_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257012.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLAPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3467..4876
                     /gene="thrC"
                     /locus_tag="ACFM72_000384"
     CDS             3467..4876
                     /gene="thrC"
                     /locus_tag="ACFM72_000384"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HFC6257013.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFNATSSNDETVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPA
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGEMVVCLETALAAKFDATIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4922..5716
                     /locus_tag="ACFM72_000385"
     CDS             4922..5716
                     /locus_tag="ACFM72_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257014.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLAVRK
                     NALMFGNLEGIPLDAQIRQEAEAGKSDAWLAGLEAIARVHKKQQFLSQAFARNMMWDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5904..6680
                     /locus_tag="ACFM72_000386"
     CDS             5904..6680
                     /locus_tag="ACFM72_000386"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC6257015.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6756..6862
                     /locus_tag="ACFM72_000387"
                     /pseudo
     CDS             6756..6862
                     /locus_tag="ACFM72_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(6933..7076)
                     /locus_tag="ACFM72_000388"
     CDS             complement(6933..7076)
                     /locus_tag="ACFM72_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257016.1"
                     /translation="MENNKVKSDYAAKQESLGKVDENKNETMKIPPQVGTHMLGFSFI
                     FKC"
     gene            complement(7752..10223)
                     /locus_tag="ACFM72_000389"
     CDS             complement(7752..10223)
                     /locus_tag="ACFM72_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC6257017.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYEGEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIACRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRVSSGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LVVLGNAMRLHKQVDMPSEKMPSEQ"
     gene            complement(10220..11398)
                     /gene="hflX"
                     /locus_tag="ACFM72_000390"
     CDS             complement(10220..11398)
                     /gene="hflX"
                     /locus_tag="ACFM72_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HFC6257018.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(11403..12683)
                     /locus_tag="ACFM72_000391"
     CDS             complement(11403..12683)
                     /locus_tag="ACFM72_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HFC6257019.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            12685..12813
                     /locus_tag="ACFM72_000392"
     CDS             12685..12813
                     /locus_tag="ACFM72_000392"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257020.1"
                     /translation="MPSSRRGNGVFYQNGKLANAVSDCRLPNRQTFPRADAEPDAV"
     gene            complement(12836..13561)
                     /locus_tag="ACFM72_000393"
     CDS             complement(12836..13561)
                     /locus_tag="ACFM72_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HFC6257021.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGRRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13634..14311)
                     /gene="radC"
                     /locus_tag="ACFM72_000394"
     CDS             complement(13634..14311)
                     /gene="radC"
                     /locus_tag="ACFM72_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HFC6257022.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14434..15783)
                     /gene="gshA"
                     /locus_tag="ACFM72_000395"
     CDS             complement(14434..15783)
                     /gene="gshA"
                     /locus_tag="ACFM72_000395"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HFC6257023.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            16043..17452
                     /gene="leuC"
                     /locus_tag="ACFM72_000396"
     CDS             16043..17452
                     /gene="leuC"
                     /locus_tag="ACFM72_000396"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HFC6257024.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLKAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17549..17803
                     /locus_tag="ACFM72_000397"
     CDS             17549..17803
                     /locus_tag="ACFM72_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257025.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17865..18506
                     /gene="leuD"
                     /locus_tag="ACFM72_000398"
     CDS             17865..18506
                     /gene="leuD"
                     /locus_tag="ACFM72_000398"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HFC6257026.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEERVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPSGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18681..19951
                     /locus_tag="ACFM72_000399"
                     /pseudo
     CDS             18681..19951
                     /locus_tag="ACFM72_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
     gene            19967..20698
                     /locus_tag="ACFM72_000400"
                     /pseudo
     CDS             19967..20698
                     /locus_tag="ACFM72_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
     gene            20732..21802
                     /gene="leuB"
                     /locus_tag="ACFM72_000401"
     CDS             20732..21802
                     /gene="leuB"
                     /locus_tag="ACFM72_000401"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HFC6257027.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLNILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21965..22528
                     /locus_tag="ACFM72_000402"
     CDS             21965..22528
                     /locus_tag="ACFM72_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HFC6257028.1"
                     /translation="MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMLKTEVCGGDFSTTIDRT
                     KWGMDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5553 a         5941 c         5826 g         5413 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggcg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agtttttcgg atgatgatta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtga cggcttcctt tcggtggccc gaacgcagcc catatcaaaa agaaaagtca
     1261 tgcgcccctt ttgcgaggcg cgatatataa ggaggaagat tatggacaaa cataatggga
     1321 cttatcggga tttgcaccgt ccggcttcgg aatttgcgac gcgggacgaa tatttggaac
     1381 atgaattgca gattatgcaa ccaaaacgct ggcggcccaa cctgcccttt cgcgattacc
     1441 gcttcgagtg ggaggatttg attcctgcga tggcgggaac gattggaaaa gtggtgatgg
     1501 tgggggcggt ggcggcggcg tttgccgcac ctttggggct gcctgacagc tttgtactgg
     1561 aaaatgtgcg ctatgagctt ttaatcgccg ccgcgtttat cttattggta tcgggctttt
     1621 ttctgcccgg cgccaacctg cccggtacgc acgggccgct gattccgatg attcccatcg
     1681 ttgtgtcggc aggcgggcat cctttggcgt tcggcatttc gattgcggtt ttaggtctgc
     1741 tgatggcttt atttcgcggc ggcagtatta tggcgaagct gacaagcaac ggcgtatgcg
     1801 gcggattatt actctatttg ggctttatcg gcacgacggg gcaggtaaaa aaattgtttt
     1861 cgtgggcagg cggttttaat atgccctaca tcgcttttac cgtcattatt gtaacgattg
     1921 tgatgtacgc tttgttggag cattggaaaa aacgctggtt agccgtgcct ttgggatgct
     1981 tgattgccgg tgtggtggca tttgcattgg gtgcgccgtt tgagtttcac accgcccccg
     2041 gcctgcctcc aatgagtcct gcttattggt ggggtgaaaa cagcggctgg catctggggt
     2101 tgccgacggc agaaagtttt ttggttgtct ttccatttgc ggtattggct gttgcaatgt
     2161 ggtcgcccga ttttttagga catcaagtgt tccaaaaaat cagctatccg gaaaaaaccg
     2221 ataaggtatt gatgaatata gacgacacca tgacaagttg ttctgtccgt caagcagtgg
     2281 gttctatttt agggggtgca aattttacct cttcttgggg aacttatatc gtaccggcat
     2341 cgattgccaa acgccccatt ccgggcggtg cggttttaac ggcggtttta tgtattatcg
     2401 ccgggttatg gggctatccg atggacttgg cgatttggca gccggtattg agcgtagcct
     2461 tggtcgtagg cgtatactta ccgcttttgg aagcgggcat ggaaatgacg cgcaaaggca
     2521 aaaccaccca atccgccgcc atcgtggtgt tctcttccgc cttggtcaat ccggttttcg
     2581 gctgggcgtt gacgatgctg ttggataatt tgggcttaat cggctgcaaa gagcgcagtg
     2641 cgcaattagg tttcgccgga cgcgtgttga tacccgcagt aggtttcttg atcttgtgtg
     2701 tggcgatggg tgcggtcggg atgctgcccg gtatcccgcc gtttttggaa cacttcaaat
     2761 ctttgggcta ggctgaaatc ggaaatgccg tctgaaccgc tttcagacgg catttttgca
     2821 aacaggcaaa atgacggcgg cgggattttt tattttcccg attgaagtat aatgttgccg
     2881 ggcttcaacc ggatattcaa aacggtttgt tccaacactc ggaacggcgc ataaaacgcc
     2941 gcccttcgcg ttatcccgaa cggggcggct aatcagattc tatcgccata aaaggcgggg
     3001 tttcaaccga aaaggaattg agatgaataa aaccttgtct attttgccgg tggcaatctt
     3061 actcggcggc tgcgccgccg gaggcggtaa cacattcggc agcttagacg gtggcacagg
     3121 catgggcggc agcatcgtca aaatggcggt tgggagccaa tgccgtgcgg aattggacaa
     3181 acgcagcgaa tggcgtttga ccgcgctggc gatgagtgcc gaaaaacagg cggagtggga
     3241 aaacaagatt tgcgcttgcg tcgcccaaga agcacccgaa cggatgaccg gcaacgatgt
     3301 gatgcagatg ctggctccgt ccacgcgcaa tcaggcactt gccgccctga ccgccaaaac
     3361 ggtttccgcc tgcttcaaac acctgtaccg ctaaccttct tcagacggca tgaggcagat
     3421 gccgtctgaa gccgttttcc tgcaatttcg acagacgaga aaaatcatga aatacatcag
     3481 cacgcgcggc gaaaccgcac acaaaccgtt cagcgaagtt ttattgatgg ggcttgcccc
     3541 cgacggcggc ctgatgctgc cggaacatta tccgcaaatc gggcgcgaaa ccttggacaa
     3601 atggcgcggt ttagcttatc ccgaattggc gtttgaaatt atgcgcctgt ttgttacgga
     3661 tattccggag gacgatttgc gcgacattct gaaccgtact tacacggaag cggcgttcgg
     3721 tactaaggaa atcacccccg tccgcacgct ttcagacggc atcaaaatcc aagccttgtc
     3781 caacggcccg acgctggcgt tcaaagatat ggcaatgcag tttttgggca atgcgtttga
     3841 atatgtttta aacaaagaag gcaaaaaact caatatcttg ggcgcgacca gcggcgatac
     3901 gggttcggct gcggaatatg ccttgcgcgg caaaaagggc gtgaacgtat ttatgttgtc
     3961 gcccgacggt aaaatgagcg cgttccaacg cgcgcaaatg tacagcctgc aagacgagaa
     4021 tatccacaat atcgccgtga agggaatgtt tgacgactgt caggatattg tgaaggcggt
     4081 gcagaacgat gccgcgttca aggaaaaata ccatatcggt acggtcaact cgatcaactg
     4141 gggacgcatc gtcgcgcaag tggtttatta ctttgcaggc tatttcaacg ccacttcaag
     4201 caatgacgaa accgtcagct tctgcgtacc gagcggcaac ttcggcaatg tttgcgcggg
     4261 acacattgcc aaacaaatgg gcctgcctat ccgccgcctg attgtcgcga ccaatgaaaa
     4321 cgatgtgttg gacgagtttt tcaaaaccgg tgcataccgc ccgcgcaaca gcgcgcatac
     4381 ttatgtaacc tccagcccgt ctatggacat ttccaaagcg tccaacttcg agcgtttcgt
     4441 gttcgacctg atggatcgcg atcctgcgga aatcaatacg ctgtgggcgg aagtggctgc
     4501 aggcaaaggc tttgacctgc gatttgcctt ggacaaagtc ggtggcaaat acggttttac
     4561 ctctggcaaa tccacccacg ccgaccgcct cgccaccatc aagcaggttt acgagcaaga
     4621 ccaagaactc atcgacccgc acactgccga cggcgtaaaa gtcgcccgcg aagtgcgcga
     4681 agaaggtgaa atggtggttt gtttggaaac cgcgttggcg gcgaaattcg atgcgaccat
     4741 acgcgaagcc gtcggcgatg ccgccattcc gcgccctgcc gcgctggaag gtttggaaaa
     4801 cctgccgcag cgcgtgcaaa ccgtgccgaa cagtgcggat gcggtaaaag gcatcatcga
     4861 acaaaccctt gcctgatatt ccgtacaggg gcattccgtc cgaacttaag attgaaagaa
     4921 aatgacctta cctatgcagg aaacccgttt ttccatactg ctagacgaat tggcggcaaa
     4981 acaggaggca gccatcgccc cccacctgct tgccgacgga accaaggtat ggatacgcaa
     5041 agcaggcagg cacaatgcac gatggcgtta cgcgctgctc ggtatggttg cccgatattt
     5101 gaaactgggg gtgttgaagc cggttcccag cctcggcggc gagcctgcca ttgcaaccga
     5161 atcaaaacgc ctgtacgaat tgcgctcggc ggggatagcc gttcccgaat tgctcgccgt
     5221 caggaaaaat gcccttatgt tcggcaattt ggaaggcatc ccgctcgatg cgcaaatccg
     5281 ccaagaagcc gaggctggaa agtcggacgc ttggcttgcc ggtttggaag ccattgcacg
     5341 cgtgcataaa aaacagcagt tcctcagtca ggcgtttgca cgaaatatga tgtgggacgg
     5401 aaaaaacatc agctttttgg attttgaaga cgatccttcc gaagtcctga ccatagcgca
     5461 atgccaagcc cgcgattggc tctgctacat tcattctacc gcgctaatat tgaaaaacgg
     5521 cggactgctg gaagctgctg cggaaaaatg gggcggcgta ttgtcggatc agcctgccga
     5581 aatacaaaag ctgattgccg ccaccgtcaa accgatcctc ccgatacgca ggctggaaca
     5641 cccccgctgg ggacgggacg cgctcaggct ggcagcctcg atttccctga tttcccttgc
     5701 cgatatgccg ccataagccg ccgcccgccc cacgatgccg tctgaagccc ttcagacggc
     5761 atataaccaa cgcgcatcaa gcattgtcgc aaccatccgt ttcgtttaga attttgactt
     5821 tatcccgaat tgggcagata ttctcattct gacacacgtc ccaaataaac actccccatt
     5881 tcttttaccg acaggaaacc caaatggcag cattcaatac ccaaaaagta ttgtccgtac
     5941 accactggac agacgcatat tttaccttta cctgcacccg cgacgaatcg ttgcgctttg
     6001 aaaacggcca attcgttatg gtcgggctga tggtggacgg caagccactg atgcgcgcat
     6061 acagcgtcgc ctccgccaac tgggaagaac acctcgaatt tttcagcatt aaagtccaag
     6121 acggcccgct gaccagccgc ctgcaacacc tcaaagtcgg cgacgacgtg ttaatcagca
     6181 aaaaaccgac cggaaccttg gttgccggcg acctgaatcc gggcaaacac ctttacctgt
     6241 tgagcaccgg taccggcatc gcccctttct tgagcatcac caaagatccc gaaatttacg
     6301 aacagtttga aaaaatcatc ctcgtacacg gcgtgcgcta caaaaaagat ttggcgtact
     6361 acgaccgctt taccaaagaa ttgcccgaac acgaatacct cggtgacttg gttaaagaaa
     6421 aactgattta ctacccgatt gtttcgcgcg aagaattcga acaccacggc cgcctgaccg
     6481 acctgatggt gagcggcaaa ctgtttgaag acatcggcct gcccaaaatt aatcctcaag
     6541 acgaccgcgc catgctgtgc ggcagccccg cgatgctgaa agacacctgc aaagttttgg
     6601 acgatttcgg actgaccgtc tctccgaaaa caggcgtacg cggcgattac ctgattgagc
     6661 gcgcatttgt ggaccaataa tctgcttgaa aatgccgtct gaacggcatc tgcgataaaa
     6721 aaccccgaat cctgccaatc aggattcggg gtttttatag tgaattaaat ttaaattagg
     6781 acaaggcggc gagccgcaga cagtacaaat agtacggcaa ggcgagccaa cactgtaccg
     6841 gtttaaattt aattcactat atagtgggta aaaattagaa atgcacattt ccgtcattca
     6901 cgcgcaagtg ggaatccaga cctatccgtt aattagcatt tgaaaataaa agaaaaacca
     6961 agcatatggg ttcccacttg cgggggaatc ttcatcgtct catttttgtt ttcatcaact
     7021 tttcctaaac tttcctgttt ggctgcataa tcagacttga ctttgttatt ttccatattg
     7081 agcttctctt aatttgaaaa aattaacata aacatttaaa aataaaacaa aattatataa
     7141 taaaaaaaat aatgagaata taaaggataa aaagagagtt aagttattta atcggacttg
     7201 ttctctataa atcataagac accaaataag ccataataaa tttagtaaat aaaaactgct
     7261 tatacccaac tttcttttct tggaacctat tattatttca actccggatg aaaaaataga
     7321 atttaaaaat ttttttcttt gatatatcgt taatatctcc ctagtttttc ttaaaaaaat
     7381 ataatcatat atatactaca caacattggt aataaataaa ttaaaagcga aaggtaatta
     7441 aattgataat tgtaaattat ataataaaca acatacgaag aaaaaattat tatagatgat
     7501 ttactatacg aataaaaaaa tatcctacct agcccgaacc ttcttataat ttgtactatg
     7561 tgattatcca tttcaatatc catttaagct ttcaattaat tttctatatt tttcaatggc
     7621 atgtatcatg ctatgcttgg gaaatatcat cttggttgat gatcaagcca tgtatgcaaa
     7681 gattggaata tggtatttgt cgtgctaata atgcccccgt tactgttata cgtctaaagc
     7741 aacgctgtcc gtcattgttc ggacggcatt ttttcagacg gcatgtccac ctgcttgtga
     7801 agccgcatag cattgcccaa tacgaccagc gaactgaagc tcatacccag tgcggcaatc
     7861 cacggttgga catagcccaa aacggcaagc ggtacggcaa tgatattgta cgcgcccgcc
     7921 catatcaggt tttgccggat aatatggcgg gtgcgccgcg cctgatcgag caggtgggcg
     7981 acggtacgca aatcttcgtt caataacaca atgtccgcgc cgtccctcgc aatatccgtc
     8041 ccgcccgctg cggcggcgga tacgtctgcc tgcgccaaaa cgggcgcgtc gttgatgccg
     8101 tcgcctatca tcagcacttt tttcccttct ttttgcaagg ctttgacgta ttccagtttg
     8161 tcctcgggca tggcttgggc gcggtagtgc gcgacaccca gggcgcgtgc ggtttcggca
     8221 acggcggttt cgcggtcgcc gctgaggatg tgcagggtca ggtttttgcc tgccaactgc
     8281 cgcaccgcct ccgccgcgct gtctttcaag gggtcggtca ggtagaacac ggcttggaaa
     8341 ccgctttgac tgccgaggta aaccgcgctg ccgccgcctt ctgtttgcgg ttctttacct
     8401 gaaatttcgg cgacatagga tgccctgccc aatgcccaaa cctgtgtttc gccgttgacg
     8461 gtcagttgcg cgcccacgcc ttcgccgatg cggttgaggc gttgtttaat agcgatgtcg
     8521 gggacgctgc cgcttgaaac acggcagttg aggatggcgc gggcaagggg atgttcggac
     8581 tgttgttcta aagcctgcgc caccgcgaga acaaaggctt cgtctgtgcc tctcaacaat
     8641 gagatacggc ggacggcggg tttgccttgg gtcagcgtgc cggttttgtc gaagatgatg
     8701 tcggtggttt gggcgagggt ttcgattgcc tgctttccgc cgattaaaat gccttcgcgc
     8761 gccagcgtac cggtagaagc tgccagcgcg gtcggcgtgg caagcgataa ggcgcagggg
     8821 caggtaatga ccagcagggc gacggtaatc cacaatgcgg tgtgcgcgtc ggcgtacagc
     8881 gtccagccga tgaagacggg gacggcaagc aggagttcgc cgaatatgaa agacgaggcg
     8941 tattgttccg ccaactcggc agtgcgcggt ttttgcgcta aggcgcggtc gagcaggcgg
     9001 acgatgtgcg acagtcgcgt gccgccgccg gtgcggtcgg tgcgtataat cagggggctt
     9061 tgcgtgttga gtgtgccggc ggttactttt tcagacggca ttttggcgac gggcaggctc
     9121 tcgccggtca gcatagattc gttgacggca ctgcttcctt ccagcaccgt gccgtcaacg
     9181 gggatggttt cgcccggttt gaccagcacg atatcgcccg ccttcaattt gacgacagct
     9241 gcctcgcagg tttcctgcgt atcggggtaa tcgggcatat gatggcaaaa cgcaggaatc
     9301 agcttcacca gcctctcggc ggcatcgcct gccttacggc aggcaatgtg ttccataaag
     9361 cgtccgccca gcaggaaaaa cagcagcatc gcgatggatt cgaaatacat cccctgcccc
     9421 gcatttgtcg caaggctgta aacgccggcg ataaaggtca taatgatggc gacggtaatc
     9481 ggcgtgtcca taccgacccg acggtttttc aggtcgcgca acgcgccttg ataaaacggg
     9541 acggcgcaat aaaatacgac gggcagcacc attaaaaagc cgccccaatg gaggatttgc
     9601 aggaaatcgg gttcgatatc gccgccgtaa aggtaggtcg gcagcgcgaa catcatcgtc
     9661 tgcatcatcc ccagcccggc aacggcgagg cggacgatgt attgtttgcg ttctttttgg
     9721 ttggcggctt cgattttttg cgcgtcatag ggtgcggcgg tgtagcctat ctgccggatt
     9781 ttcaacagaa tatcggaaag gcggattttg ccgtcgtccc agacgacgcg gcagcggtgc
     9841 gtgctgtaat tgaggtcgat gcggacgatg ccgtctgtac gcaaaagctg ctgttcgatc
     9901 agccagacgc aggcggcgca ggtgatgccg ccgagcatta aaaccgcctc gcgcgtgccg
     9961 ccgtgggttt ccacaaagtc ggactggact tcgggcaggt cgtacaggcg gatttggtcg
    10021 aggatttctt ggggcggcag ctcggttttt tgcgcgtcgg cggtgcgttg tttgtaataa
    10081 ctgcccaagc ccgcgtcaat aatgctttgt gcgaccgcct gacagccggc gcagcaggtt
    10141 tctcggtctt cgccttcgta gcggacggtc agatgcaggt tttcgggaac atccagcccg
    10201 cagtggaaac aggttttttt catggcattt cggtttcgtc tgtgtttggt gcggcggcac
    10261 aagactcggc aatggcttcg cgcagtgcgt ctataccggt attttcagca acggaaatgc
    10321 ggacggcggc aatttttccc gcagcgtcgc gccatatgcc cgtgttttgt tcttcagacg
    10381 gcagcaggtc ggttttgttg tacaccttga tgcacggaat atcgccggca tggatttctt
    10441 gcagtacgtt ttccacgtct tcaatctgct gtccgctgtt cggggcggcg gcatcgacga
    10501 cgtgcagcag cacatcggct tgcgcggttt cttccagcgt ggcggaaaat gccgaaatca
    10561 gtttgtgcgg caaatcactg acgaatccga cggtatcggt caggataatg ctgcattcgg
    10621 gactgatgta cagccgccgc gccgtggtgt cgagtgtggc gaaaagctgg tctttcgcat
    10681 atatgcccga cttggtcagc cggttgaaca ggctggattt gccgacattg gtatagccga
    10741 ccagcgcaaa cgttttgatt gtgcccgatt cgcggggctt gcggcgcagg gcgcgctgtt
    10801 ttttgaggtt gacaagctgt tttttcaagg cattgatccg atgggcgatc aatcggcggt
    10861 cggtttccag tttggtttcg ccggggcctt tcatgccgat accgccgcgc tggctctgca
    10921 gatggccgta accgcgtatc aagcgtcccg ccaaatggct caattgcgcc aactcgactt
    10981 gcagcctgcc ttcctgcgtg cgggcgcggc gggcgaaaat cgccagaatc agccctaccc
    11041 tgtccaatac gcggcatttc agttcttttt caaggttgcg ttcctgcgtg ggcgtgagtt
    11101 cgtggttgaa tacgaccaaa tcgatgccgt ctgcggcaac tgcttctgac agctccgccg
    11161 ccttgcccgt gccgacaaac agcgcggtgt gcggacggtc gcgtttggca gtctccacgc
    11221 gcacggaatc gccgcccgcc gctttgacca gctcgacagc ttccgccaat gccgtctgaa
    11281 aaccgttcag acgggtggca ctgctgcccg tgccatcttt gtccaacatt acgcccacca
    11341 gcatgacgcg ttcgggttgc gcttgggtac tgccgttgcg gcctgttctg cctgtcatgt
    11401 attcaatcct gtaaataaag ggttacgcct cgttccgttt ctccttccgg tgcaagcgtg
    11461 atgcggctgc ccgccattcc gtcaacgctg aagacgatgc cgcccgcctc gtgccttcct
    11521 atggacaggc ggctgccggg tcgctgccgg taggtataac gggtacacgc ttccaaacac
    11581 cagcgtccgc gccagtggat gaaatatttt tcgccttttc taaccgcaag tgtctcgccg
    11641 ccgtttacct caaaataagg gtaatcgggt tttcgggttc taaactgcca tttcgcctgc
    11701 gcgcgccgtc cgttgcggac atagtcgaat accgccgtat aaagcgtacc gtattccaaa
    11761 ggtttgagcg gaaaaagcgc gaattggtac gcggtcagcc tgccgttggg gtcgttgccg
    11821 gcggttaaaa ccctgacggg gcggatttcg tttttaccct gatacagctt gaaacttttc
    11881 atcgtaattt tgcctgccgc ctcggaaaaa tcaatgctgg caggattgcc cgtgatttca
    11941 tattccggca cggggtctgg acgctcgccg tggaaataag gcagtgcgcc gctgccgacg
    12001 ggataggctg tatagagcag ctcctgtgcg ggcatggctt cgtcggtgta cacgaccgca
    12061 ccgttatggc aggcgttgcg gtaatatttc cgtcctgctt ccggctgatt tctgccttgg
    12121 gcgcaatgcc gctcaaacct gccgttgccc tgattgaata cgagaacggt tttaccgttt
    12181 tcgcgcacaa atgccgctcc tgcctcatcc gtatggcggt caagtaggga aaggcggtgg
    12241 tagattgcgc tcattaatcc gtccacttgg cgttgctgcg tgcggatgtc gctgtcggac
    12301 gattcggcgg cttcctcttc cgtgctgatg ttttcatgca cgccgttgta gagatacccg
    12361 gcaaggcgtg tgcgttcggt cagcttttgt gcggtgtagt gcggattgtc gggatggtgt
    12421 tcgccgtgtc cgtcttcggg attgagcgtg agatagcgtg cgtgcctgcg ggcggaattt
    12481 tccaaaaccg gcgcgtgtgc cagcttgtgc aaaccgattt gggcgcggat gcggttgagg
    12541 tagtgcagcg catcgccgcc gtccctgatt tgcggtgcgg acggatagac aagttcgccc
    12601 gcgggcaggg attggttttg ggtatgatag aaaacgcctg ccgccgaacc caacaggagc
    12661 agccgaataa aaagggattt cataatgccg tcctcccgac gcggcaacgg ggtgttttat
    12721 caaaacggca aacttgccaa tgcggtttcc gattgcagat tgccaaaccg gcaaaccttt
    12781 ccccgtgccg atgccgaacc tgatgccgtc tgaaccttca gacggcatcg ggtgtttatt
    12841 tgtccacccg gatgggtgca ggttcgtatt gtgtcgattc gtcgccgtaa tacagcacgc
    12901 cgagtttgat ggggatgcgt ccctgcgatt tgcggtgggc gttggaatcc ctcagggaat
    12961 aggcgcaacc gcaatattcc tgctggtaga agttttcacg tttgctgatt tcaatcatac
    13021 gcgcgctgcc gccgcctttg cgccagttga aatcccaata caccacatca tcgtaaggcg
    13081 cggcggcacg gcggccgcag tcgttgattt gcgccatatt tttccaacgg gaaatgccca
    13141 gcgaactggt aaagacgggg aacccgtgtt catgcgcgta ttgcgccgcc ttttcgaaac
    13201 gcatatcgaa acacatggtg cagcggatgc cgcgttccgg ctcaaactcc atgcctttgg
    13261 ctttggcaaa ccattctttg cggtcgtttt cgtaatcgtc gtctttgtcg atgaaaggga
    13321 tgccgaactt ttccgcaaag cgtacgtttt cctcttttcg gagcatatac tctttatgcg
    13381 gatggatatt gggattgtaa aaataaatgg tgtaatcaat gccgctggcc agcatggctt
    13441 ccatcacttc gccgctgcac ggggcgcagc aggaatgcag caagactttt ttatgtccgc
    13501 cgggcgggac gagtatgggg cggtcaatgt cggtaacggt aggtttgttt tgtgtttcca
    13561 ttaacttaac aatatctgtc gaatacggtt gaagcggcta ttttatcaga gccgccgcat
    13621 gtaaaacagg gtgtcagggc atcagcccga gctgcctgaa cgaacggacg gtttgcgccg
    13681 ttacgataaa atggtcgagc agcgacacat cgaccagcga catggcctgt gccagccgcc
    13741 ttgtgaacat gatgtcttcc tgcgaaggtt cgggcgagcc gcccggatgg ttgtgcgcaa
    13801 taatcaggct gtcggcatat tcgtccaatg ccagtttgac gatttcgcgg atgtaaatcg
    13861 tgttttccgc aaccgtaccg cgcgacagct ctctgaccgc aatcagttgg ttttggcggt
    13921 tcagcagcag cgcgacgctg acttcgactt tttcctgccc caaatgaaag cgtaaataat
    13981 cggcaacggt atccggatcg gacaggacga tgctctcctg caattcttcc gccaatatcc
    14041 gccgcccgat ttccctgact acggcaaact gtgtgaaact tgccgtcccc atccctttgt
    14101 atgccgacag tttgccgacc tccgcgctca tcagcctccc caaactgccg aactcctgca
    14161 gcaaataacg cgccaaatcg accgcactca ttccgcgcgt gccgacgcgc agcaggattg
    14221 ccaaaagttc ggcatcactc aaagccgccg ccccgcgttc caacagcttt tccctgggtc
    14281 tttcgccttc cggccattgc ttgatgctca tgttttccct tttttaaata gtctgagatg
    14341 ccgtctgaaa caaatgttcc cacacgccaa atatccgaaa tgccgtctga accggatttc
    14401 cgcttcagac ggcatctgta tttcaaaaca gtcttacgcc gtttcttcca actcgatgga
    14461 cgccgccaga agcgacaggc gtgccattac gccgtaaacg tagaggcggt tgtgttcgtt
    14521 gtccacgtcg cagtcttttt cagagcgcgg catacccagc gagtcccatt gttcgaatac
    14581 gcgcttgcag gcttcgggag cttcttggga gttgtcgccg ttgccggtgg ggatgctgtt
    14641 ggacagcgga acaaacacca taccgccggc gttgaggttt tcgtccgcac cgcgcccttc
    14701 gtgtacgcgg aaaaagccgc cgatgacgaa gcggtccatc atatagacga cgggttcgca
    14761 caccgcgccg tttaaggttt cataagtata aatcccttct tggacaatca cttcgctgac
    14821 ttccaagcct tctttgactt tcgccatttt attgcggttt ttacggttca atccgcgcac
    14881 ttcgtcggcg gatttgacgc tcatcacgcc catgccgtaa gtgccggcat cggctttgac
    14941 gatgacgaaa ggtttgtcgg taatgcccga ttcgtcgtat ttggcttgaa ttttcgccag
    15001 cacacgttct accgcttccg ccaacgcgtc ttcgccttca cgcccttgga agtccaaacc
    15061 gccgattttt tcaaaataag ggttaatttg ccattcgtcg atgccgatta acttggcaaa
    15121 ttcggcggta acttggttgt acgcgccgaa atgatttgtt ttgcggcgcg tcgtccaacc
    15181 gccgtgcaac ggcggcaaaa cggtttggct gatgcctttg aggatgtcgg gaatgccggc
    15241 agacaaatcg ttgttcaaca aaaccacgca aggcgaaaag ccgtctgcaa gatggacgcg
    15301 gtcgcgggta cgcaataaag gttccaacag gattttgtcg cccaatgcag tttcaaattc
    15361 ggtcggttcg gttacttccg gattcaggct gcccaagcgc acttcatacc ctgccgaacg
    15421 caaaatctcg ccgagggcgt aaatgttttg caggtaaaac gtattgcgcg tgtggttttc
    15481 gggaataatc aatacggatt tcgccgtttc gcaggcgcgt tgcaccgcat cttgcgcggc
    15541 aaccgccgcc agcgggataa agttgggatt cagattattg aagccgccgg ggaacaaatt
    15601 catatcgata gacgaaattt tgtaaccggc attgcgtata tcgaccgaac cgtaaaacgg
    15661 cgggcggtgt acgctccact gcgtgcggaa ccacgcctcg attttggcgt gattggacag
    15721 gatttttgcc tcaaacgcct gaagttgcgc cgaatgttcg ggcgacatca ccggtaattt
    15781 catctttcgt ctgcctctgt gtgttttttg acaagatgca gatgataatg cctttgaaag
    15841 aatgacgaca agtattcttt cgtatcgaat catgctttag atataactgt ttactgaaat
    15901 ggacaatacg tctaattttt tcgttaaaat tgtttgcaaa ataacaccgg ctcaaaaatt
    15961 agacaaaatt tgttgcgcgg tataaagaat acgtctaaaa tccgcccaat ccgcattacc
    16021 atttatccaa aagaacaaca tcatgacagc acaaaccctc tacgacaaac tttggaacag
    16081 ccacgtcgtc cgcgaagaag aagacggcac cgtcctgctc tacatcgacc gccatttggt
    16141 gcacgaagtt accagccctc aggcatttga aggcttgaaa atggcggggc gcaagctgtg
    16201 gcgcatcgac agcgtcgtct ccaccgccga ccacaacacc ccgaccggcg attgggacaa
    16261 aggcatccaa gacccgattt ccaagctgca agtcgatact ttggacaaaa acattaaaga
    16321 gtttggcgca ctcgcctatt ttccgtttat ggacaaaggt cagggcatcg tacacgttat
    16381 gggccccgaa caaggcgcga ccctgcccgg tatgaccgtc gtctgcggcg actcgcacac
    16441 ttccacccac ggcgcattcg gcgcactggc gcacggcatc ggcacttccg aagtcgagca
    16501 cacgatggcg acccagtgca ttaccgcgaa aaaatccaaa tccatgctga ttgccgttga
    16561 cggcaaatta aaagcgggcg ttaccgccaa agacgtggca ctttacatca tcgggcaaat
    16621 cggcacggcg ggcggtacag gctacgccgt cgagtttggc ggcgaagcca tccgcagcct
    16681 ttctatggaa ggccgcatga ctttatgcaa tatggcgatc gaagccggtg cgcgctcagg
    16741 catggttgcc gtcgaccaaa ccaccatcga ctatgtaaaa gataaaccct tcgcacccga
    16801 aggcgaagcg tgggacaaag ccgtcgagta ctggcgcacg ctggtgtctg acgaaggtgc
    16861 ggtattcgac aaagaatacc gtttcaacgc cgaagacatc gaaccgcaag tcacttgggg
    16921 tacctcgcct gaaatggttt tagacatcag cagcaaagtg ccgaatcctg ccgaagaaac
    16981 cgatccggtc aaacgcagcg gtatggaacg cgcccttgaa tacatgggct tgaaagccgg
    17041 tacgccatta aacgaaatcc ccgtcgacat cgtattcatc ggctcttgca ccaacagccg
    17101 catcgaagac ttgcgcgaag ccgccgccat cgccaaagac cgcaaaaaag ccgccaacgt
    17161 acagcgcgtg ttaatcgtcc ccggctccgg tttggttaaa gaacaagccg aaaaagaagg
    17221 cttggacaaa attttcattg aagccggttt tgaatggcgc gaaccgggct gttcaatgtg
    17281 tctcgccatg aacgccgacc gcctcgcacc ggggcaacgc tgcgcctcca cctccaaccg
    17341 caattttgaa ggccgtcaag gcaacggcgg acgtacccac ctcgtcagcc ccgctatggc
    17401 agccgccgcc gccgttaccg gccgctttac cgacatccgc atgatggcgt aagtattttc
    17461 aggcggtctt taagaatttg acgcggccgt ctgaaatata tcccgtaagg cagaaacacc
    17521 tttaatattc aaaccaagga gtttaaccat gaacaaactt ttcattaccg ccctgtccgc
    17581 cctcgccttg tccgcctgcg ccggcacttg ggagggcgcg aaacaagaca ccgcccgcaa
    17641 ccttgacaaa acacaggccg ccgccgaacg cgccgccgaa caaacaggca acgccgtcga
    17701 aaaaggctgg gacaaaacca aagaagccgt caaaaaaggc ggcaatgccg tcggacgcgg
    17761 catttcccat ctcggcggaa aaatcgaaaa cgccaccgaa taaccgattc gcgatgccgt
    17821 ctgaaaccgc ttcagacggc atcgtcagca caagacgcaa acccatgaaa gcctttacca
    17881 aaattaccgc catcgtcgcc ccgctcgacc gcagcaacgt cgataccgac gccatcatcc
    17941 ccaaacaatt tttaaaatcc atcaaacgca gcggcttcgg ccccaatgcc tttgacgaat
    18001 ggcgttacct cgaccacggc gaaccaggca tggacaacag caaacgcccg ttgaaccctg
    18061 atttctcgct gaaccagccg cgttaccaag gcgcgcaaat cctgttgacg cgtaaaaact
    18121 tcggttgcgg ctcttcacgc gaacacgccc cttgggcatt ggacgactac ggcttccgcg
    18181 ccgtcatcgc ccccagcttc gccgacatct tctttaacaa ctgctacaaa aacggccttt
    18241 tacctatcgt gttgaccgaa gaacgggttg accgactttt caaagaagtt gaagccaacg
    18301 aaggctatca gctctccatc gaccttgccg aacaaaccct gaccacacca agcggcgaaa
    18361 cgttcacatt tgacattacc gaacaccgca aacactgcct cttaaacggc ttggacgaaa
    18421 tcggtctgac cctgcaacac gccgacgaaa ttcacgcctt tgaagaaaaa cgccgccaaa
    18481 gccagccttg gctgtttaac ggttaaaacc tataccgtct gaaggccgtt cagacggcat
    18541 tcctgataac atataattgt tgcggctaat gtaaacagag gggcgataaa ttgctttcat
    18601 cttttaagcg ggcttagcga cactctaaat taatgcaata atgcaactct ccatttcaaa
    18661 taaattttta gatttttaat atgcaacaaa ttaaatttat tgacttattt tccgaaatga
    18721 gtggcatcag gaaaggattc gaacaagcct gtcggaaaca gtcggttgct tgcgaatgtg
    18781 tttttacttc agaaatcaaa ccggcagctt tggaagtatt gaagcaaaac taccctgatg
    18841 aagtgccgta tggagatata acgaaaattg aaacagggga tattcccgat tttgacatcc
    18901 tgttggcagg cttcccttgt caggcttttt ctttcgcctg aaaaagatta ggctttgaag
    18961 atacacgggg aacgcttttc tttgatgtgg caaggatttt aaaggcaaaa aaaccaaaag
    19021 gttttatttt ggaaaatgtg gaaggattgg tgacacacga tagaaaagat tcgacacaaa
    19081 aaatagggcg caccctgacc gttattttgg aaaccttgga agcattgggc tactatgttt
    19141 cttggaaagt tttaaatgca aaagatttcg gcattcccca aaacaggaag cgcatttatc
    19201 tgacaggcag tttgaaatcc aaacccgact tatctttcga aacaagccca agtccgaaat
    19261 taaaaaatat tttggaatcg ggactgccta ccgaaagcag ccctttcatc aaaaaattgc
    19321 taaaaaaatt tcccccgtcc gaactgtacg gaaaatcagt aaaagacaaa cggggaggga
    19381 aaaacaatat tcacagttgg gatattgaat taaaaggcgc agtaaccgaa gaagagaagc
    19441 aattgttaaa tatccttcta aaagaacgga ggaaaaaaaa tgggcttcag aaatcggcat
    19501 agattggatg gatgggatgc ctttgacaaa agcgcaaatt tcaactttct ataaacaccc
    19561 cgatctccaa aatattttgg acagcctgac agataaaggc tatttggttt tagagcatcc
    19621 gaaacaaaaa attggcgggc aaagaatcaa agatgaatcc ctgcccaaag gctacaatat
    19681 tgtttcaggc aaaaaatctt ttgaaatcaa taaaatatta gatcaaaacg atgttgcgcc
    19741 aaccttggtt gcaatgaata tggagcacct tttcgtcgtt gacaacggcg gtttgcgtac
    19801 acttaccgga aaagaagggt tgcgcttatt cggctatccg gacgattatt cgtttgatat
    19861 tcccaaaaaa gacagatgcg atttattggg taataccgtt gccgtccctg tgattaaggc
    19921 ggtatctgaa agacttctgc atactttata aaccgacagg gataaaatga taaaacttac
    19981 tgcacaacaa atatttgata agttgctgga tgaagaaaaa atcttatcgg ccaatggtca
    20041 aattagattt ttcttaggcg atgtggatat tatcgtcaaa caaaaagatg ttgtcggcaa
    20101 catcattcag gaatggctcg gcggatgatt gagaaaaagg gaaattgaat ttgatgtttc
    20161 aaccaatacc caaatgcctc ccgatttctt tttaaataaa aaagaccgca gcagagaatt
    20221 gttggaagta aaggcgttca accgaaatgc cggcccgggt tttgatattg cagattttaa
    20281 aatgtattct gataaaatca ttcataagcc ctatatgctg gatgtagact atttaatatt
    20341 cggttacgat atggacgaca acggcaatgt aaccatcaag gatttatggc ttaaaaaagt
    20401 atggcaaatt acgagaagca tggatgggtg ggcaattaat cttcaagtca aaaaaggcgt
    20461 ggtgcataaa atccgcctgg gtgtttggta cagcataaat aaaaagaata tgcctatgtt
    20521 tgaatgcttg gaagattttg tttccgcaat tgaagaaacc gtttatcaaa acccggcaac
    20581 acggcataac gcatccttat ggaaaaagaa atttgaggaa gcctataaaa aacactacaa
    20641 ccgatcgatt tccatacctc gttggcacga aattgcacac aaatacaaaa agaaataacc
    20701 cttcaaccat caacccataa ggaaacttga aatgaccaaa catatcgcca tcctccgagg
    20761 tgacggcatc ggtcccgaaa tcgtcgccga aaccgtccgc gtactcgaca aactcatcgc
    20821 ccaaggtttg gatgccggct acgaatacgc cccattgggc ggcgaagcct atgacgaata
    20881 cggtcatcct tatcccgaat ttacgcaaaa cctctgccgc aaagccgatg ccgtcctgct
    20941 tggtgcagtc ggttctcctc aatacgacaa cctcgaccgt ccgttgcgcc ctgagcgcgg
    21001 cctgttggca atccgtaagg atttgaacct gtttgccaat ttgcgtcctg ctgttttata
    21061 tcccgaatta gccaacgcct ccacgctgaa gcctgaaatc gttgctggtt tgaatatttt
    21121 gattgtgcgc gaactcaccg gcgacatcta tttcggcgaa ccgcgcggca tccgcgttct
    21181 ggaaaacggc gaacgcgaag gctacaacac catgaaatac agcgaaagcg aaatccgccg
    21241 catcgcccac gtcgctttcc aatccgccca aaaacgcagc aaaaaagtct gctccgtagg
    21301 caaagccaac gttttggaaa ccaccgaact gtggcgcgaa atctttgaag aaatcggcaa
    21361 agagtaccct gatgtcgagc tttcccatat gtacgtcgac aacgccgcca tgcagctcgt
    21421 gcgtgcgccc aaacaattcg acgtcattgc caccggcaac atcttcggcg acattctctc
    21481 cgacgaagcc tccatgctga ccggctccat cggtatgcta ccttccgcct cgctggacga
    21541 aaacggcaaa ggcctgtacg aaccgtctca cggctccgcc cccgacatcg ccggacaaaa
    21601 caaagccaac ccgctggcca ccatcctctc gctcgcaatg ttgctgcgtt acagcctgaa
    21661 cgacgaagcg cgcgcgcaac aagttgaaaa cgccgtccaa aaagtgctgc aacaaggctt
    21721 gcgtaccagc gacatttacg aagaaggcac aaaactcgtt tcctgctccg aaatgggcga
    21781 tgcggtactc gccgccttgt aaaaaaacaa agcgcggatc acaccgcgct ttttcatccg
    21841 cccttttccg cccgccccgt tcgtcaaccg cctgcaaacc caccgtttac cggcaggaaa
    21901 tgccataaat ccctgcctat gttaggataa acgcctttac cggcccacac aaaggattat
    21961 catcatgaaa aaaatcatct tcgccgcact cgcagccgcc gccatcagta ctgcctccgc
    22021 cgccacctac aaagtggacg aatatcacgc caacgcccgt ttcgccatcg accatttcaa
    22081 caccagcacc aacgtcggcg gtttttacgg tctgaccggt tccgtcgagt tcgaccaagc
    22141 aaaacgcgac ggtaaaatcg acatcaccat ccccattgcc aacctgcaaa gcggttcgca
    22201 acactttacc gaccacctga aatcagccga catcttcgat gccgcccaat atccggacat
    22261 ccgctttgtt tccaccaaat tcaacttcaa cggcaaaaaa ctggtttccg ttgacggcaa
    22321 cctgaccatg cacggcaaaa ccgcccccgt caaactcaaa gccgaaaaat tcaactgcta
    22381 ccaaagcccg atgttgaaaa ccgaagtttg cggcggcgac ttcagcacca ccatcgaccg
    22441 caccaaatgg ggcatggact acctcgttaa cgttggtatg accaaaagcg tccgcatcga
    22501 catccaaatc gaggcagcca aacaataaat cttgatgcga atcagcacaa atgccgtctg
    22561 aacgtccttc aaacggcatt tgtgccgtct tcatcaaacc gccccgccaa cggtaagccg
    22621 atatggcgga gcacaatccg ccgaaagata tttcagcggc aggcagggct tgccggaaag
    22681 tccggaaagt atagtggatt aacaaaaacc agtacggcgt tgcctcgcct tag
//
LOCUS       DAXHRP010000013        22440 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.013, whole genome shotgun sequence.
ACCESSION   DAXHRP010000013 DAXHRP010000000
VERSION     DAXHRP010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.013"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..2258)
                     /gene="clpA"
                     /locus_tag="ACFM72_000403"
     CDS             complement(<1..2258)
                     /gene="clpA"
                     /locus_tag="ACFM72_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HFC6257029.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDDEDGNDSDGLGREG
                     EEAEQKTGSLSDYTVNLNTEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLVGEAG
                     VGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVLKQLE
                     KIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRTIFDK
                     DHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSARYINE
                     RFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVSRIPEKTVSHDDKQVL
                     QFLDRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTEAAKQ
                     LAYSMGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVLLLDE
                     IEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGFTAKR
                     ERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKKVEAE
                     FTPALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDWDAAK
                     EEAVLKFKKSKV"
     gene            complement(2260..2562)
                     /gene="clpS"
                     /locus_tag="ACFM72_000404"
     CDS             complement(2260..2562)
                     /gene="clpS"
                     /locus_tag="ACFM72_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HFC6257030.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            2805..3008
                     /locus_tag="ACFM72_000405"
     CDS             2805..3008
                     /locus_tag="ACFM72_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HFC6257031.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            complement(3305..4636)
                     /gene="pmbA"
                     /locus_tag="ACFM72_000406"
     CDS             complement(3305..4636)
                     /gene="pmbA"
                     /locus_tag="ACFM72_000406"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HFC6257032.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGFAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            4790..5296
                     /gene="yjgA"
                     /locus_tag="ACFM72_000407"
     CDS             4790..5296
                     /gene="yjgA"
                     /locus_tag="ACFM72_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HFC6257033.1"
                     /translation="MFEQEDEWISKTQMKKQMNGLQDLGMELTKLSNDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     QARVRLLADDGALTQFMSDFPHADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            5343..6056
                     /locus_tag="ACFM72_000408"
     CDS             5343..6056
                     /locus_tag="ACFM72_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257034.1"
                     /translation="MLFRKTTAAVLAATLMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKQFQMVEPNPR
                     FAYQALPVKLESPASQNFSTDDLCLRYDTDRPADIAKLKQLEFEAVELDNRTIYTRCV
                     SAKGKYYATPQKLNADYHFEQSVPADIYYTVTKKHTDKSKLFENIAYTPTTLILDAAG
                     AVLVLPMAALIAAANSSDK"
     gene            6125..7825
                     /gene="recJ"
                     /locus_tag="ACFM72_000409"
     CDS             6125..7825
                     /gene="recJ"
                     /locus_tag="ACFM72_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HFC6257035.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAAGRLADAVERKEKILIVADYDADGATACSVGMSGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMALRAELRRRNYFSDGIKEP
                     NLGELLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLAQDDAEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPPGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTFITDGSLPARDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIRTVYRLVANEWRNNLELQLYIDYWEAA
                     "
     gene            8262..9623
                     /locus_tag="ACFM72_000410"
     CDS             8262..9623
                     /locus_tag="ACFM72_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HFC6257036.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFDLSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPVPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASQEQRTEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            9771..10094
                     /locus_tag="ACFM72_000411"
     CDS             9771..10094
                     /locus_tag="ACFM72_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257037.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(10198..11151)
                     /locus_tag="ACFM72_000412"
     CDS             complement(10198..11151)
                     /locus_tag="ACFM72_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HFC6257038.1"
                     /translation="MTHTVHLHLEEIDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNNGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(11190..12386)
                     /locus_tag="ACFM72_000413"
     CDS             complement(11190..12386)
                     /locus_tag="ACFM72_000413"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC6257039.1"
                     /translation="MHVLVIPSWYPQSEQDVDGIFFQNQALALQRKGIKTAVLAPMFR
                     YLRKETASILTGPYGFAQYRQKGLDIYAWHGMYFFPRFPLIDIDRIRWVRAGLKAFER
                     YIGENGIPDIIHAHCMNYAGILAFKISQKYGIPYVVTEHSSTITRGLVRPHQWQPMKN
                     AAAHASALLAVSCRFAQVLQHKYGTTWQYLPNILGNIFTRAFNPPQINRPDKYFTFCT
                     ISHLRRLKGHDVLLSAFARALAKHPNLRLNIGGSGQEETSLKRQARQLGIAHAVTFLG
                     ALQPEAVLDLMRNSDAFVLASRTETFGVVYIEALSQGLPVIATRCGGAESIVSDGNGY
                     LVPVDDDDALADALIKMYEHHSDFEPDRLRENCLNEFGEDTVIGKLIGIFRQAIAEYG
                     KKIPVK"
     gene            12530..13234
                     /locus_tag="ACFM72_000414"
     CDS             12530..13234
                     /locus_tag="ACFM72_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HFC6257040.1"
                     /translation="MLRSILAASLLAVSFPTAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVTAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDELNRFIADIQADAALEYTDFHVSRERRNEVIDQVSKDAILRFK
                     ARADKLSGILGTSGYKIVKLNLGHIGSHIAGGGTAQAKMLRAMPMAASVNMEGADSAA
                     PGVEEISISVNGTVQF"
     gene            complement(13298..13864)
                     /gene="dcd"
                     /locus_tag="ACFM72_000415"
     CDS             complement(13298..13864)
                     /gene="dcd"
                     /locus_tag="ACFM72_000415"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HFC6257041.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(13930..14346)
                     /locus_tag="ACFM72_000416"
     CDS             complement(13930..14346)
                     /locus_tag="ACFM72_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MORN repeat-containing protein"
                     /protein_id="HFC6257042.1"
                     /translation="MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGDVGKDGLLS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVAANREVFLEPFNSDSTKFRNMALSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            complement(14408..15307)
                     /locus_tag="ACFM72_000417"
     CDS             complement(14408..15307)
                     /locus_tag="ACFM72_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HFC6257043.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     AAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(15338..16795)
                     /gene="der"
                     /locus_tag="ACFM72_000418"
     CDS             complement(15338..16795)
                     /gene="der"
                     /locus_tag="ACFM72_000418"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HFC6257044.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL
                     ENFPEPEVEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREDRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(16949..17578)
                     /locus_tag="ACFM72_000419"
     CDS             complement(16949..17578)
                     /locus_tag="ACFM72_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HFC6257045.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFAVLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(17579..18874)
                     /gene="hisS"
                     /locus_tag="ACFM72_000420"
     CDS             complement(17579..18874)
                     /gene="hisS"
                     /locus_tag="ACFM72_000420"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HFC6257046.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLFLVSEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRTQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(18992..19648)
                     /locus_tag="ACFM72_000421"
     CDS             complement(18992..19648)
                     /locus_tag="ACFM72_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC6257047.1"
                     /translation="MMKFKYVFLLACVAVSLSYRLNAAPMFNDNPVVYGKIKVQSWKE
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSM
                     SRAQFLEAWQTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVEQIRQARAE
                     "
     gene            complement(19706..19897)
                     /locus_tag="ACFM72_000422"
     CDS             complement(19706..19897)
                     /locus_tag="ACFM72_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257048.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIDSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(19930..20466)
                     /locus_tag="ACFM72_000423"
     CDS             complement(19930..20466)
                     /locus_tag="ACFM72_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257049.1"
                     /translation="MKKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(21264..21629)
                     /locus_tag="ACFM72_000424"
     CDS             complement(21264..21629)
                     /locus_tag="ACFM72_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257050.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFHIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(21611..22156)
                     /locus_tag="ACFM72_000425"
     CDS             complement(21611..22156)
                     /locus_tag="ACFM72_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257051.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
BASE COUNT         5262 a         5492 c         5902 g         5784 t
ORIGIN      
        1 ttgaccttac ttttcttaaa tttcaacacg gcttcttctt ttgccgcatc ccagtctatc
       61 cgcacgaagc cgccgtcgga tagtttgccg aacagcagtt cgtcggcgag cggtttgcgg
      121 attttttcct gaatcaggcg gtgcatcggg cgcgcgccca tttgcgggtc aaaacctttt
      181 tccgccagat atttgtgcaa tgccggcgtg aattcggctt cgactttttt gtcgaggagc
      241 tggtgttcga gctggagcag gaatttgtcc acgactttga cgatgatggg ttcggacaag
      301 ggtgcaaacg ggataatcgc gtccaagcgg ttgcggaact cgggcgtgaa gagcttgttg
      361 attgcctgca tttcgtcgcc gcgttcgcgc ttggcggtaa agccgaggct ggggcggctg
      421 agactctccg cacctgcatt ggtggtcata atcaggatga cgttgcggaa atcggcactc
      481 ttgccgttgt tgtcggtcag tttgcctgcg tccatgactt gcaggaggac gttgaaaatg
      541 tcggggtggg ctttttcgat ttcgtccaag agcaatacgc aatgcggctg tttgttgacg
      601 gcttcggtca aaaggccgcc ttgttcaaag ccgacgtagc ccggaggcgc gccgatgagt
      661 cgtgatacgg catggcgttc catgtattcg gacatatcaa agcgttgcag cggtacgccc
      721 atcgagtagg caagctgttt ggcggcttcg gttttgccca cgccggtcgg accggagaag
      781 aggaaactgc ctatcggttt gtcgggcagg gcaaggccgg agcgcgacat tttgacggcg
      841 gcaaccagcg cgtcgatggc gttttcctga ccgtaaacca tgtttttcaa atcgcggtcg
      901 aggaattgca acacttgttt gtcgtcgtgc gacacggttt tttcgggaat ccgcgaaact
      961 ttggcgatga cggtttcgat ttgtgctttg ccgatgactt ttttctgttt ggatttgggc
     1021 agaatccgtt gcgccgcgcc tgcttcatcc attacgtcga tggctttgtc gggcaggaaa
     1081 cgctcgttga tgtagcgtgc ggagagttcg gcggcggctt cgagtgcgcc ttgagtgtag
     1141 cggacttggt ggaaggcttc aaacatcggt ttcaagccgc gcaggatttg aacggtttcg
     1201 gaaacggtgg gttcgaccac gtcgattttt tggaagcggc ggcttaaggc atggtctttg
     1261 tcgaaaatgg tgcggtattc gtcgtaggtg gtcgcgccga tgcagcgcag cgaacctttt
     1321 gccagcgcgg gtttgagcag gttggacgcg tccatggtgc cgccgctggt gctgcccgcg
     1381 ccgatgatgg tgtggatttc gtcgataaac aaaatggcgt gcgggatttt ttcgagctgt
     1441 ttcaagacgg atttgacccg cgcttcaaag tcgccacggt atttcgtgcc cgccaacagc
     1501 gagcccatat ccagcgcgta cacttcggca tctttaagcg cgtctggaat gccgccgttg
     1561 acgatttgat gtgccaaacc ttccgccagc gcggttttgc ccacgcctgc ttcgccgacc
     1621 aaaagcggat tgtttttgcg gcggcggcat aggatttgca ccagccgttc catttcgtgt
     1681 ttgcgaccaa tcaaagggtc gatacggccg gctttgactt cggtgttgag gttgacggtg
     1741 tagtcggaaa gggagccggt tttttgttcc gcttcttcgc cctcgcgtcc caggccgtct
     1801 gaatcattgc catcctcgtc atcgggcgag ccatgggcaa tacagcgcaa aacttcaaaa
     1861 cgcgtaaccg attgcagctt gaggaaatag acggtgtggc tgtcggtttc gctcatcagc
     1921 gcgaccaaaa cgtccaacgg ttcgactgcg gcttttccgg cagactgggt atgcaccatc
     1981 gcccgttgca tcacgcgttg gaagccgagc gtgggccggg tttcgaccgt gtctaaaagg
     2041 tgttcgggaa tcaggggggt gttttcggca acgctggcgg cgagctgttc ggacaccact
     2101 ttcaaatccg cgccgcatag ttttaagacg ttcggcacgg aggcatcttc ttcgatgagt
     2161 accaaaagca gatgctcgag gctgataaat tcataatgag ccttacgcgc ctcgcggtaa
     2221 agctgctgca aaatctgttc caattcgggt gcaagcatat taaatctcct cgacaataca
     2281 ttgcagcgga tgcccttcgg cttttgcccg ctgcatgact tgttgttgtt tggtttgggc
     2341 aatatcgcgc gtgtaagtgc cgcacaggcc tttgccttcg tgatgaacca agagcatcac
     2401 cgctaccgcc tgttcttgtc cgagcataaa gatttcggtc aggatttcga cgacaaattc
     2461 catcgtggtg taatcgtcgt tcaataggaa aacgccgtaa cgtttcggcg gcagggtgtt
     2521 cagacggtgc aagagcgtgt cggattggtg ttgcgcggtc atagtgtgtc ccatttgaaa
     2581 gccgcgttca gacggcattt ttgttgtatt ttcggtactt ttgcctattt tcccactttt
     2641 ttgaaaacat agcttgacgt tttgtcttaa caaatgtaaa aagacggtta agcaggattg
     2701 ggcatccgcc gagtatatca agctggaagg aacgccagac ggctcggttt gccgtatgcc
     2761 ttgttttgct gattttgtta atttttgagt ataggaagtt tctaatggca accggtatcg
     2821 taaaatggtt taacgacgct aaaggttttg gtttcatcac gcctgatgaa ggcggcgaag
     2881 atttgttcgc tcacttctca gcaatcaata tggaaggttt caaaaccctg aaagaaggcc
     2941 aacgcgtctc tttcgacgta accaccggcc ctaaaggcaa acaggccgcc aacattcagg
     3001 ctgcttaatt cctgatgtac ggtcaaatgt atatttgaaa acggcgggac aggcaatgtc
     3061 ccgccgtttt tgtctgccgt tttgccggcg gcggaaaaac cccaatcccc gcacgcctta
     3121 tcctgaactt gtgtgtaccc tgttgtggac aagtggctta gtattttgac ggataaggga
     3181 aaatcagtgc tgatgaaaaa atgtgcaatg ttgtcggcaa aaggcggtgc ggcataaaac
     3241 ggcaaacggg caggcacggg gcaaaacgtg ctgccttcgt cttcagacgg catcggcagg
     3301 gcgttcagct tccggcaacc gtcatccccg caatcagaat cgagccgatt ttgttggacg
     3361 aacgccgcaa agcgtcatcc gccacgccga caatgtcgcg gtacatatcc tgcaagcgtc
     3421 cggctacggt aatctcgtgg acggggtagg caatcacgcc gttttccacc caaaaacccg
     3481 ccgcgccgcg cgagtagtca ccggtaatgg tgttcgcgcc ctgtcccatc agttcggtaa
     3541 ccaataatcc cgtccccatt tctttcagca ggtcggattg cgtttcgtgc gtatggttca
     3601 aatacaggtt gtgcgcgccg ccggcgttgc ccgtggtctg cataccgagt ttgcgcgcgc
     3661 tgtaactgct gaggaaatag ccttcgacaa tgccgttttg aatcacgaag cgcggtgcgg
     3721 tggcaacgcc ttccgcatca aaatagctgc tgcggaaaga gcgggggatg tgcggttctt
     3781 cgcgcaggtt gaggaaatcg ggcaggactt ttttgccgat gctgtcgatc aggaaactgc
     3841 tttggcggta gagcgcgccg ccggagagtg cgccgacgag gtgtccgata aggccgcccg
     3901 aaacggtggt atcgaagagg acggggtagc tgcctgtcgg gatgctgcgg ctgccgagtc
     3961 ggcgcaaagt gcggcgggcg gcggtttgac cgatggtttc ggggctgtcc atatccggat
     4021 ggcggcaggc ggaatcgtac cagtagtcgc gctgcatccc gttttcgtcg gcggcaacga
     4081 cgctgcagga aatgctgtgg tgcgtgcctt gccggtgtgc ggcaaaaccg tgggtgttgc
     4141 cgtaaacgta ttggtaatgg ccggtttgca ccgccgcgcc ttcggagttt tcgatgcgct
     4201 catcctcgtt cagggcggct tgttcgcatt gttttgcaaa gccgacggcg gcttccgtat
     4261 ccaaatccca ttcgtggtaa aggtcggggt cgccgatgtg ttgcgccatc aactcggggt
     4321 cggcaagtcc ggcgcaaccg tcttcggcgg tgtggcgggc gatgtcggcg gcggcgcgga
     4381 cggtgtcgcg cagggcttgt tcggagaaat cggcggtgcc ggcgcggcct ttgcgtttgc
     4441 cgacgtaaac ggtaatgtcc agcgacttgt cctgctggaa ctcgatttgt tcgatttcgc
     4501 ccagccgcac gctgacgctt tgtcccaatg attcgctgaa atcggcttcg gcggcggttg
     4561 cgcccgtcgc ttttgccaag tcgagcgtgc ggcggcagag gtcgaggagt tcggaagcgg
     4621 tgtggttgaa cagcatagaa atctttcttg atgatgcttt gcggcatttt aaccgtttcg
     4681 ggcggcaggg gcaaaagcgc gccgcttgca gggcgtgcgg tgcaaaatgc cgtctgaacg
     4741 cggcggcatt ctgttaaaat gcgctattgg aaaaaattcg agaaccaaga tgtttgaaca
     4801 agaagacgag tggatcagta aaacccaaat gaaaaagcag atgaacggtt tgcaggattt
     4861 gggtatggaa ctgaccaagc tctcaaacga tacgctgaaa aaaatcggct tggacgaaga
     4921 tttgtacgaa gccgtcgtta cctataaaaa aattacgtcc aacggcgcgc tcaagcggca
     4981 ggcgcaattt atcggcaggc tgatgcgcga cacggatccc gcgcccatcg aggcgtttct
     5041 tgccaagctg cgcggcgacg atgcggcgca caacgccttt ttgcaacgcg tggaacaggc
     5101 gcgcgtacgg ctgttggcag acgacggcgc gttgacgcag tttatgtcgg attttccgca
     5161 tgcggacgcc ggtaaattgc gtaccttgat ccgcaacacc aaaaaagagc aggagcaaaa
     5221 caaaccgccg aaaaatttcc gcgccctgtt tcaagaattg aaaaccgtta tggaaaacgg
     5281 ggacgcggaa atttaggcat attttcagac gacatccgcc gttatttaga ttggaggata
     5341 aaatgttgtt ccgtaaaacg accgccgccg ttttggcggc aaccttgatg ctgaatggct
     5401 gtacggcaat gatgtggggc atgaacgacc cgttcagcca aacgaccgcc tataaacacg
     5461 ttgacaaaga ccaaatccgc gccttcggtg tggttgccaa agacaatgcc caattggaaa
     5521 agggcagcct ggtgatgatg ggcgggaaat actggttcgt cgtcaatcct gaagattcgg
     5581 cgaagctgac gggcattttg aaagccgggt tggacaagca gtttcaaatg gttgagccca
     5641 acccgcgctt tgcctaccaa gccctgccgg tcaaactcga atcgcccgcc agccagaatt
     5701 tcagtaccga cgacctttgc ctgcgctacg ataccgacag acctgccgac atcgccaagc
     5761 tgaaacagct tgagtttgaa gcggtcgaac tcgacaatcg gaccatttac acgcgctgcg
     5821 tctccgccaa aggcaaatac tacgccacac cgcaaaaact gaacgccgat tatcattttg
     5881 agcaaagtgt gcctgccgat atttattaca cggttacgaa aaaacatacc gacaaatcca
     5941 agttgtttga aaatattgca tatacgccca ccacgttgat actggatgcg gcgggtgcgg
     6001 tactggtctt gcctatggcg gcgttgattg cagccgcgaa ttcctcagac aaatgaacgg
     6061 caatgccgtc tgcaaaacct tcagacggca tttcaagcac acccgcactg taaagttcca
     6121 cgttatgtcc gtcaaaatcc aaacccgctc cgtcaatacc gacgttttta atcatttgct
     6181 taccgccggt gccgatcctt taatcgcccg gctttgtgcc tcgcgcggtg tgcaaagtcc
     6241 tgccgaattg gacgacaaac tcgcttccct cctgccttat caaacgctga caaactgcga
     6301 agccgccgcc ggccgtttgg cggatgcggt tgaacgcaag gaaaaaatcc tgattgtcgc
     6361 cgactatgat gccgacggcg cgacggcgtg ttccgtcggt atgagcggtt tggcggcgat
     6421 gggggcgaaa gtggatttcc ttgtgcccaa ccgctttgag cacggctacg gcttaacgcc
     6481 cgagctggct gaaatcgcgg cagagcaagg tgtggatttg ctgattacgg ttgataacgg
     6541 tatcgccagc atcgcaggtg tggcgagggc gcaggctttg ggtttggatg tcatcgttac
     6601 cgaccaccat ctgcctgccg agaccgtgcc cgactgcatc atcgtcaatc cgaaccaaaa
     6661 aggctgcggt tttccaagca aaagcttggc gggcgtgggc gtgatttttt atgtattgat
     6721 ggcgttgcgt gccgaattgc gccgccgcaa ttatttttca gacggcatca aagagccgaa
     6781 tctgggcgaa cttttggatt tggtcgcact cggcacggtt gccgatgtcg tccctctcga
     6841 ccacaacaac cgtatcctcg tgtcgcaagg tttgaaacgg atgcgttccg gcaaaatgcg
     6901 ccccggtatc cgcgccttgt ttgaagtggc gcggcgcgat tggcgcaaag cgcagccttt
     6961 cgatatgggc tttgcgttgg gcccgcgcat caacgccgcc ggacggctgg acgatatgtc
     7021 ggtcggcatt gcctgtctgt tggcgcaaga tgatgccgag gcgcaggaac tggcggctca
     7081 gttgaacaac ctcaatatcg aacgccgcga aattgagcag tctatgctgc aagacgctct
     7141 gaacgccttt cccgaaaccc tccctccggg tcagacgacc ctagtcgcct atcgcgacga
     7201 cttccatcaa ggcgtggtcg gtattgttgc cagccgcctc aaagaccgtt tttatcgtcc
     7261 gaccatcgtg tttgcgcctg ccgacaacgg cgaagtgcgc ggttcgggac gctccattcc
     7321 caatctgcac ctgcgcgatg ctttggactt ggtgtccaaa cgccatcccg atttgatttt
     7381 gaaatttggc ggacacgcga tggcggcagg tttgagcata ctcgaacaca atatccccgc
     7441 gtttcagacg gcatttgaag aagccgtgcg cgagatggtg tgcgaagacg atttgtcgca
     7501 aacattcatc accgacggca gcctgcctgc ccgcgacatt acgctggaac aggcgcagaa
     7561 ccttgcccga cacgtttggg ggcagggctt cgcgccgccg agttttaccg acgaatttca
     7621 cgttgtccgc cagcagcctt tgggcgcgga aggcaaacat aaaaaagtct ggttgcaaaa
     7681 agacggctac gaatttgaag ccatgttttg gcgttgcagc gaagacattc ccgaatacat
     7741 ccgcacggtg taccgcctcg ttgccaacga atggcggaat aatctcgaat tgcagcttta
     7801 tatcgattac tgggaagccg cgtagaggta gcggaacgcc gtttgaatgt gatttctgtt
     7861 ccttcatcgt atttcctttt cggttgaaac cccacccttt aaggcggtag aatcagacct
     7921 tacttgggag ggggcgtaac cccttccaaa tcagggcaac acatagggcg gtgctttatg
     7981 tgtcgtcctg tgtgttgaaa catttgcctg tttgtacgac gggaatgttc ccaatcggag
     8041 aaggcgcatc aaatttcaga ctctgccaca aaagcagggt ctgatttttt tggagggcaa
     8101 tctgttataa tgacgcgttg ccgccgcgag gacggcgtga ttcggacggc gtagtttcta
     8161 cgccttttgt ttatggttac ggcatcttgc ggaatcgtac cgcctgatgc cgtctgaaca
     8221 cggttgcccg tggagatgcc gctcttcggg ttagaatatt tatgctgaaa aaatggttga
     8281 ataagatgct gccttccggt cggagcagta aaaaagcgga aagtaaaacg gtcattcctg
     8341 ccgaaagaca caacatccgt gccgaaatgt tgagctttgc cgccgaaaac gtcatacgcc
     8401 gtctgaaagg ggcggggttt caggcttatg tggtcggcgg cgcggtcagg gatctgctgc
     8461 tcggcatcga acccaaagat ttcgatgtcg caaccgatgc cacgcccgaa caggtgcaca
     8521 aactcttccg ccgcagccgc atcatcggca ggcgttttca aatcgtccat gtgatgaacg
     8581 gtgcggagat tatcgaagta acgacgtttc gcggcggtgc gaaggttcat cagaacgcgc
     8641 acggcagaat catgaaggac aacacctacg gcagcatcga agaagatgcg atgcggcgcg
     8701 attttacctg caatgccttg tattacgatc cggaaaaaga agagattttg gatttccaca
     8761 acgggattgc cgatgttgcc gcccgcaggc tggttatgat tggcgatgcc gccgaacgct
     8821 atcaggaaga ccctgtcagg attttgcgcg ccatccgcct gtcgggcaaa ttgggatttg
     8881 atctgtcgga agaaaccgcc gcaccgattg ccgaatcaat atgccgtctg aagcacgaac
     8941 ctgtggcaag gctgttcgac gaaattatga aactgctgtt ttcagggcac gcgcgcgagt
     9001 gtctaaaacg tttgaacgga tttgacatac cggacgacat ccatccgctg ctcaatgcct
     9061 tgcgcgtttc agacggcatc gccggaaaaa tgacggtgct tgccctgaaa aataccgatg
     9121 agcggctgcg tgccgacaaa tcggtttcgg tcggtttcgt actggcggcc ctgatgtggc
     9181 ccgagttgga acgccattgg aaaagcaatc tgcaacaggg tttgaaaccc gtgcccgccc
     9241 tgtccgatgc aatcaatacg atgcgcgaaa ccgtcgaacg cggttggggc gtaccgcaac
     9301 gcttttccgc cacgatgcgc gaaatttgga tgttccagcc gcagtttgaa aaccgcaaag
     9361 gcgcaaggcc gcacaaactg tttgcacagg cgcgtttccg tgccgcctat gatttcctgc
     9421 tcttgcgcgc cgaaaccggc aatgcggacc gcgcccttgc cgagtggtgg acggcgtttc
     9481 agacggcatc gcaggaacaa cggacggaga tgaccaaaaa cgaggccgcc gcccgacacg
     9541 aaaaaaacga aggacaggcg aaaaaacgcc gccgtcgcag gcgcaaaccc aagccgaagg
     9601 ttgagggaac ggattgggaa taagggtcaa cagacaagat gaagcataaa gtgccgttct
     9661 atgtattatc ctgatttgta aggggattca tccccgtaaa taaagtctaa ccctgcctct
     9721 cggaaaaagg atgtccgggt gggcagggtt caagaaacaa ggaaaaattg atgaaaaaat
     9781 gtattttggg cattttgacc gcgtgtgccg ccatgcctgc atttgccgac agaatcggcg
     9841 atttggaagc acgtctggcg cagttggaac accgtgtcgc cgtattggaa agcggcagca
     9901 ataccgtcaa aatcgacctt ttcggttcaa attccaccat gtatgtatgc agcgttacgc
     9961 cttttcagaa gacgtttgag gcaagcgatc ggaatgaagg cgtggcgcgg cagaaagtgc
    10021 gtcaggcgtg caaccgcgaa acttcggcaa tgttttgcga agatgaggca atccgatgca
    10081 gaaaattcga ttgatgtatc ggttggacgg ataaagaaac ggatacggag cttggtttcc
    10141 gtatccgttt ttctctgccc gatttccatg catcgggttt cagacggcat tggaatgtca
    10201 gtcgtgttct gccgattcgt aggcttcgac gattttttgc accagaggat gccggacaac
    10261 gtcttcgccg gtaaaggtgt ggaaatacag cccttccacg ttgtgcagtt tctcacgcgc
    10321 atcttttaat cccgatttga tgtttttggg caggtcgatt tggctggtgt cgccggtaat
    10381 gacggctttc gcgccgaagc cgatgcgggt caggaacatt ttcatttgtt cgggcgtggt
    10441 gttttgcgct tcgtcgagga tgatgtatgc gccgttgagc gtcctgccgc gcatataggc
    10501 gagcggggcg atttcaatca ggcctttttc aatcagcttg gtgacacggt caaagcccat
    10561 caggtcatag agggcatcat aaagcggacg aaggtaggga tcgactttct gggtcaggtc
    10621 tccgggcaga aaacccagtt tctcgccggc ttcgacggca ggccgcacta aaatgatgcg
    10681 ttcgacttgg tgtttttcca tcgcatcgac ggcggcggcg acggcgagat aggttttgcc
    10741 cgtacctgcc ggcccgagac cgaatacgat gtcgtggttg agtagggcgc ggatatagcc
    10801 gttttgtctg ggtgtcctgc cgccgatgct gccgcgcttc gtacggaaat aataggcgtg
    10861 gtcatggttt ttttcttgat gaccggcatc ttctgtttgg gcttcgacgg cggcaagtct
    10921 gatgtcgccg ttgtttaggt cacgcgtctg cgccgtttct aagagtttga gcagtgcgcg
    10981 tttgccggcg tgtgcaaatg cgccgttgaa agtgaaatgt tcaaaacggc ggctgatgtg
    11041 gatatcgagt gctttggcaa gtaaatcaag gttgttgtca aaagaaccgc acagacgctg
    11101 caacgccaag ttgtcgattt cttctaaatg caggtggacg gtatgtgtca tatgaaggtc
    11161 cgaatagttg gatattgtgt gattttaatc tatttcaccg gtattttctt accgtattct
    11221 gcgattgcct gtcggaaaat gccgatcaac ttgcctataa cggtatcttc gccaaattcg
    11281 ttcagacagt tttccctaag tcggtcaggt tcaaaatcag agtggtgttc atacattttg
    11341 atgagtgcgt cggcaagggc atcgtcgtcg tcaacaggaa ccaaatatcc gttgccgtct
    11401 gaaacaatag attccgcacc gccgcagcgt gttgcaatga cgggcaatcc ttgggacagt
    11461 gcttcgatat agaccacgcc gaaggtttct gtgcggctgg caaggacgaa tgcgtcgctg
    11521 ttcctcatca aatccaagac tgcttcgggc tgcaatgcgc ccaaaaatgt aacggcatgg
    11581 gcaattccca actgacgtgc ctgccgtttc aggcttgttt cttcttgtcc gctgccgccg
    11641 atattcaaac ggaggtttgg gtgttttgcc aaagcacggg caaaggcgga caggaggaca
    11701 tcatgtcctt ttagccggcg cagatgggag atagtgcaga aggtaaaata tttgtccgga
    11761 cggttgattt gcgggggatt gaaggctcgg gtaaagatgt tacccagaat gttaggcaga
    11821 tattgccatg tagtgccgta tttatgttgc aggacttggg cgaaacggca gctgacagcg
    11881 agcagtgcgg aggcgtgtgc cgccgcattt ttcataggct gccattggtg cggacgcacc
    11941 aaaccgcgcg taatggtgct gctgtgttcc gtgacgacat aggggatgcc gtatttttgg
    12001 gaaatcttga aggcaagtat gccggcatag ttcatacagt gggcatggat gatgtcggga
    12061 atgccgtttt ccccgatata gcgctcaaag gcctttaatc ctgcccgcac ccagcggatg
    12121 cggtcgatgt cgattagcgg aaaacggggg aagaaataca tgccgtgcca tgcatagatg
    12181 tccaaacctt tttgccggta ttgggcaaaa ccgtaaggac cggtcaggat gcttgctgtt
    12241 tctttccgca agtagcggaa catcggtgca agcacggcag ttttgatgcc ttttctctgc
    12301 aatgccagtg cctgattttg aaaaaaaatc ccgtccacat cctgttcgga ttgcggatac
    12361 catgagggga tgacgaggac gtgcaacggt tcggacataa tatgattccg tatcggaaag
    12421 acggttatta taaggcagac cgatcgaata tttaaattgg tgttttacgc taacgcaatt
    12481 tagcataccg atatgctaga ttggcggttt tataagtaag gatacggata tgttgcgttc
    12541 tattttggcg gcttccctgc tggcggtatc ttttccgacg gcggctgaag cattgaatta
    12601 caatattgtc gaattttctg aatcggcagg tgtagaggtg gctcaggata caatgtccgc
    12661 acgtttccaa gtgacggcgg aaggacggga caaaaatgcc gtcaatgctg agtttgttaa
    12721 aaaattcaac aatttcacca gaaaatcaaa aaatggtagc tttaaaaccg aattggtatc
    12781 gcgcagtgcg atgccgcgct atcaatatac caacggcaga cgcattcaaa caggttggga
    12841 ggagcgtgcg gaatttaagg tcgaaggtag ggattttgat gagttaaacc gttttattgc
    12901 cgatattcaa gcagatgccg cattggaata tacggatttc catgtgtcgc gtgaacgccg
    12961 aaacgaggtc atcgatcagg tcagtaaaga tgctattttg cgtttcaagg cgcgtgccga
    13021 caagttgtcg ggcatattgg gtacgtccgg ttataaaatc gtcaaattaa atttgggaca
    13081 catcggcagc catatcgcgg gtgggggaac tgctcaggca aaaatgcttc gtgccatgcc
    13141 gatggcggca agcgtcaata tggagggtgc ggattccgcc gcgccgggtg tggaggaaat
    13201 cagcatcagt gtcaatggaa cggttcagtt ctaaccacgg ataaataggt agatgccgtc
    13261 tgaaaccgga tgatacggtt cagacggcat ttatatttta ggctttgggc agggttacgc
    13321 cggtttgtcc catgtatttg ccgttgcggt ctttgtatga agtttcgcac acttcgtcgc
    13381 tctcgaagaa gaggacttgc gctacgcctt cgcctgcgta gattttggcg ggcagggggg
    13441 tggtgttgga aaactcgagg gtaacgtagc cttcccattc cggctcgaac ggggtaacgt
    13501 tgacgatgat gccgcagcgg gcgtaggtgg atttgcccaa gcagacggtc aggacgttgc
    13561 gcgggatgcg gaaatattcg accgtgcgcg ccagtgcgaa ggaattgggc gggatgatgc
    13621 agcagtcgtc ttcgacggta acgaagtttt tgggatcgaa gtttttggga tcgacgatgg
    13681 tgctgttgat gttggtgaag attttaaatt cgttggcgca gcggatgtcg tagccgtagc
    13741 tggacgtacc gtaggagatg atgcgtttgc cgtcggcttc tttgatttgg ttcggctcga
    13801 aggggtcgat catgccgaat tcttcgctca ttcggcgtat ccatttgtcg gacttgatgc
    13861 tcataatgtt ttccttgttt cttgcagtgt tcggacaaag cattggggga tgccgtctga
    13921 aaacggggct tatttgtttt tgggcagctt cacttcttta atcatgccgt tttcgcattt
    13981 cataatgaag agggtttcgc cgttttgcga gacggtaaat ctgccgtgtg ccaagccttt
    14041 tttgaacgtg cccgacaatg ccatattgcg gaatttggta ctgtcggaat tgaacggctc
    14101 gagaaatact tcgcggttgg cggcaacggt ataaacgcct tgcccgtcga atttgccgtt
    14161 tttgaacgaa ccggtataac cgcgcccgtc ccggcaacgc catatgcctt tgcctgaaag
    14221 aagcccgtct tttccgacat cgccgtcgta ggtgcagccg ggttcttgat aggaagtcag
    14281 gacggcggcc gaagtgggga gggcgaacat catggcgggc agtaggaatg cgagatgttt
    14341 aagcataagg gttattccat tggattttgg ttgacggtat tttgtcgtga aaaagccgtc
    14401 tgaaaaatca atcttgccag ccgcctaaat aggaaaccag ctcttccaac atggtgctga
    14461 cggattccgc catcaggatt tgcgaggcga aggcaaggct ggcggcatcg tcgccgttgc
    14521 tttcggcttc ttcctgcaat acgtcgaggt attggatgcg cttgagtgtg aagtcttgag
    14581 tgaggataaa ggcaatttgt tcgcgccaca ccaagcccag ttgggtaacg gttttaccgt
    14641 ttttgacgtg ttgaaccact tcgtcggcgg ttaaatcttg tttggatact ttgacgacgg
    14701 gaacaatatc gcccgtacct ttgagttcgc aatcgctgtc caattcaaaa ccgccttcgc
    14761 aatgcccttg caacagccag ccggtcatca aggaagaggg cgattgcttg gtattcggca
    14821 gcgaggcttc caaaccgccc aaagcttcgc gcagcttggt caggatgttt tctgctttgg
    14881 cggaagccgc gttattgacg agcaggtagc cgtggcgggt gttaaacacc gcttctgtac
    14941 ggctgctgcg ggtaaacgct cggggcagca ggtcgtctgt aatttgctct ttaagctctt
    15001 gtttttcttt gcgaccgaca ttgcgggctt cattgttttg gatttccgcc accttctctt
    15061 ccaaaatatc gcggatgacg ccggcaggca ggactttttc ttcttttttc agggcgacgc
    15121 gcaaggtaaa gtcggcaggg aaaacgagtt cgggagagaa cgaaaccggt gcggcaaagc
    15181 cttcgctgaa ccagtctaag ccttggcaat gggtaaattc agcttcagca agtttgtcgg
    15241 caagtacgtc tgcctcaggc agcttttctt tgttgagcgg ataaaaacta atctgcttga
    15301 accacataat gtttcctgtt gtttgaaatg tcgggaatta tttgctgaat tgttttttca
    15361 cactgacttt ggttttcttc ttgaagcggt ttttctcttc tttgcggtct tcgcgtttct
    15421 caatacggtt gctcaggctg acacggcgca gcggtttttt cttcggtttg tcttccgcat
    15481 tttcataggg gttttctgaa acattgtatt gaattctgag cggcgtgcct tgcagattga
    15541 aggctttgcg gaatgtttgg gtcaggtagc gcgtatagct gtcggaaatt gcgtgcagcg
    15601 aattgccgtg taccacaatc accggcggat tcatgccgcc ttggtgggca tagcgcattt
    15661 tcggacgcac caagccggca cgcggcggtt gctgacgctc gatcgcgctt tgcaggacgc
    15721 gcgtgatttt cggtgttggc atcttaatca tcgccgcgtt gtaggcagcc tgaatgctgt
    15781 cgaacaatcc gtctatgccg cgttctttca atgcggaaat aaagtggaat ttagcaaaat
    15841 caaggaaata cagtttgcgg ttgatatcgc gtttcacttg ctcgcgacgt tcttcgctga
    15901 tgccgtccca tttattgacc gccaccacca aagcacggcc tgcctccaaa gcgaaacctg
    15961 caatcgtcgc atcttggtcg gcgatgtcct gctgcgcgtc caataccaaa acagcgacgt
    16021 ttgccgcttc aaccgcctgc atcgctttga taacggagaa cttttccacc gcttcatcga
    16081 ctttgccgcg acggcgcaca cctgcggtat cgatgatggt gaacggtttg ccttcgcgct
    16141 cgaaatcgat atggatactg tcgcgcgtcg tgccggccat atcgaaggca atcacgcgct
    16201 cttcgccgag aatggcgttt accagcgtgg atttgccgac gttcggacga ccgatgacgg
    16261 caaaaacggg atgttttgca tcggcttctt cgacttccgg ctcggggaag ttttctaaaa
    16321 tttcttcaat caggtaatac acgccgtcgc cgtgcgcacc ggaaataaca taagggtcgc
    16381 ccaaagcaag ttcgtagaac tcggcagcaa gcacggccct gttgccgcct tcgcctttgt
    16441 ttaccgccag ataaacaggg cgcggacttt ggcgcaaacg gtcggcaata atcttgtctt
    16501 gcggtgtcaa accggtgcga ccatccacca aaaacacaac cgcatcggcc tcatcgacag
    16561 cctgcaaggt ttgttttgcc atttcgtgca aaatgccgct gtccacaacc ggctcgaaac
    16621 ctccggtatc gatgaccaaa taaggtttgc tgccaacttt gccgtgtccg taatggcggt
    16681 cgcgcgtcag accgggcagg tcgtgtacga gcgcgtcttt ggtgcgcgtc aaacggttga
    16741 ataaagtaga tttgccgacg ttggggcggc cgacaagcgc gatggtgggt ttcattattg
    16801 ggtctttctg tgtcaagtgc cgttcgggag aactgaacac gagcaggtgt ccgttggaca
    16861 cggtaaatag gttcttcacg gcaagaggcc ataaagaggg agggtaaaat gccgtctgat
    16921 aaataatgga cggcatttca gacggcattt atttcagcga atcaagtttc atttgaacca
    16981 attcgcgacc gacagaatct tgaggcattt tttctaaagc ctgtccgtag ttttttaagg
    17041 cttcctggct ttttccctgt gcggcataga catcgccttt ggtttccatc agcagggggg
    17101 cgaagtccgc ttcaaccggc gtgtcgagcg cggcaagtgc ggcatcgtat tttttttgtt
    17161 gcaacaacac aacgcccaga cgctgcgccg ccaacgcttg aatcaggctg tctttttggt
    17221 tggacaacac ccatttcaaa tggccttcgg caacatcgta acgctgtgcg tcaaattcgg
    17281 ttgccgccgc catcagcgtg gcttgggcgg cggaaatgga atgcgggtag ctttgttgga
    17341 gtttggtcaa ttcggcattg atttcgcttt gcggggcttt gttttgcgcc ttttccacga
    17401 tgtttgccag caccgccgcc gcttcctgat tttgggaagc cgcacggttt tggtaaaccg
    17461 tgtatcccaa gtagccgagc gccgccaaaa tcagcacggc aaacagccat ttgcccgtgg
    17521 ttttccaaaa atatttaaag ttgtctaact cttgttgttc ttcgagatgg gctgccattt
    17581 atgcgttctt ccattgttgt aaagtatggg ttaaatcctc ggcggcgaca gtttgctgac
    17641 cgtgtgcgcc gttcatgtct ttgagcgtaa ccgtaccgtt cgccagttcg tcttgcgcca
    17701 caatcagggc aaagcgcgcg ccgctgttgt cggctttttt catttgtgct ttcaggcttt
    17761 gatagccgga atgctgcatt acattgaaac cttgcgtgcg caaggcttgc gcgtatttca
    17821 tcacctgcaa gtccgcacct tcgccttggt gcattgcata gacatcaggc gcggcgttca
    17881 cttccagcga accgtattcg ctcaccaaaa acagcaaccg ttcgatgccc attgcaaagc
    17941 cgatagacgg cgcaggtttg ccgccaagct cttcaatcaa accatcgtaa cggccgccgc
    18001 cacacacagt cgcctgcgcg ccgagtttgt cggtcgtcca ctcaaaaacc gtctgattgt
    18061 aataatccaa accgcgaacc aagcgcggat tttcaatata ttgaataccc aaaccatcca
    18121 acatcgcctt gaagcgtgca tagtggtttt gcgaagcctc gcccaagtaa tccaccaaac
    18181 gcggcgcggc gttgcagatt tcctgcaaat cagggttttt cgtatctaaa acgcgcaaag
    18241 gattggtttt cagacggcgt ttgctgtctt catccaattt atcttcataa cgggtcagat
    18301 attcaaccaa tgccgcacgg tgtgccgcgc gttcctcacg gttgcccaag ctgttgattt
    18361 ccaaagtcag gtattcgcga atacccaatt tttcccacaa gtcggcagac atcgcgatga
    18421 tttccgcatc aatatccgga ccttcaaaac ccaaagcttc gataccgacc tgatggaact
    18481 gacgataacg gcctttttgc ggacgctcgc ggcggaacat cggccccata taccacagct
    18541 tttgcgggct gttgtagaga aggttgtgtt cgaccaccgc acgcagacaa gaagccgtac
    18601 cttcaggacg caggctcaaa ctcaaagaat cgtttgaatc ggaaaaggtg tacatttcct
    18661 tgccgaccac atcggtttct tcgccgatgg agcggacaaa caaaccggtt tgctcgacaa
    18721 tcggcgtacg gatttgctgg tagccgtaag cgcgcgtcca acggtttacc gtatcttcaa
    18781 acgcctgcca aaacgcagcc gtcagtttga aatctttttg ttcgacaggt aaaaggtcgt
    18841 tcataccttt tacagattga attttttgtg ccatttcaat atgggataag cgaaaatcaa
    18901 atagttgggc attatagctg atttttaagg gtttgtgagg ttgggagtaa atcaaaaggc
    18961 catctgaaac agttttcaga cggcatttga cttactctgc acgtgcttgc ctgatttgtt
    19021 cgactgcaaa ctccgtctgc cgcttgggat gatgtgtgaa aaacaattta tttgaaattg
    19081 tctcggcttt tttcggcacg accgccaaaa tcttacctgc caaatttccc tcacgggttt
    19141 gccaagcctc caaaaactgc gccctgctca ttgaaacatg ccccagcgac gggtcggcaa
    19201 gcaaaaccgt attgccgtct atcccgcgca ataccgagaa atgatcatcc ttgcggtatt
    19261 tcagatacac gatgacgggg attttcaact gcgcgagctg ctcgaaagac agggcatagc
    19321 ctttcgcttc aaaacccaaa tcaggcataa tgcgccgcat atcctcaaac gacgcgcgca
    19381 tctgctcctt atccagcttt ttcaacactt cttcttccgt cagcgtttgc ccgtaaaaat
    19441 tgttcaaaag cgtcgccacc gaagccgccc cgcaggaaaa atccaaatcc tgctttacaa
    19501 tattgaaatc gcgcctctct ttccaactct gcactttgat ttttccgtaa acaacaggat
    19561 tatcgttaaa catcggcgca gcattcaaac gataagataa agaaacggca acacacgcca
    19621 acagaaaaac atatttgaac ttcatcatat tttccacata aagggcagcc tgaaaatctt
    19681 tcaggctgcc cttgtcaaat tattcctagc tttcggcttt tttggcaaac caaacaatcc
    19741 gattacccgc ataatacttt ccatttattg aaatccgaca agccgcgccc aaaaaatgcc
    19801 atgcactgtc gatttccgca gcaatctttg taccgttttc ttcaaattcc aaatattcac
    19861 ccaataataa acttgaaaca gaacgcgtgg gcagcaagtg cccaccctac gcttattcaa
    19921 ataatttgat taaataaaga ataaagaaaa tgcatcagga acaaaattat aatctgccac
    19981 ctgactcaca ccgcttttaa agtaaggggc atcaaaatca aaaccgcaaa aaaaataatt
    20041 tttgcattga tttttaatag atttaaaatt cgaatatagt gtttctccag atttaaaaag
    20101 tttatcttta tctatatatt tgatgctttc cctatccaaa ataaatattt caaacattaa
    20161 aaaatcatta catgaccaag ccaaatcata aatttgattc aaatgggtat cataaagata
    20221 aaaataataa ggtttgggaa caggtaaaat atttaatgga aaaggaggac taattttctt
    20281 aatatctgat gactgatatc catatctttc tatattctta aaaatttcat ctttcttaag
    20341 ataacaagac attctgacaa tcacaacctg ttcatcggat atattatcta tttgcatggc
    20401 gcgtataaca cgccatgcct gattaaaatt agtctccctt accttagaat ctattatctt
    20461 tttcaaagat gaaaatgccc cttatcttga actctccagt tagaacctgg aagtttcgta
    20521 cctcttaaat gtgtattaat atttcttata gtttcattaa aatgccacgc gctgccgatt
    20581 tcaacggtaa ttttcgtacc gctttcttca aattccaggt attcccccat tagctaacgc
    20641 aaagaagcag acgccatttc ggcttcgtta tgataaaccc gccttccgtt gatatagact
    20701 tccgcccctg tccgctccaa attccaaaaa ttccgtactg aaatttccat atcccgatat
    20761 tgtgcagacc atgttttttc gaaggttttc ataaaatttc ctatacctgt ccaatcggca
    20821 catatcaatt gcattattac atctcaatac gataaatatt tcttaagtca aaatgcaagc
    20881 ctgaccgtac cttaactgtc aaaattttat tattttttat tgattttaaa acaatttctg
    20941 caaaattctc ttcgctttct ctctttttta gaagcacata agaaaaaata aaacttcccc
    21001 gattaaattc ataaatatgt ttcaaccatt cgcctcctct ttctgtaaga caagattcag
    21061 tttcattctt ccttattgta taaatatttc cttcacaaaa tctgaaataa atccatctta
    21121 tccataatta aagaaaaagt ttcacctcga gattttgtca acaattcgca aggttgcgat
    21181 gttgcaatca aatagccgaa agacattttt tacctcatac atggtcgaaa tcagtttctg
    21241 ttagttcaga atccattttt tcgtcaacaa ctgaatccgc atttttgaat taacgttttc
    21301 atcagctgcc gtttatctaa accggcaggt tcagtttcaa aataagcctt atatgaagac
    21361 tgtaagcatt tcagaaaaag atcatcagaa gacatatctg ccgaatcaaa tacaactgtt
    21421 ttgattttgg tacttaccca aaaccctttt tgctcttttt ctactatatg gaaattcaga
    21481 atatttccaa ccgaatcaaa agcacggtaa acatcatcca tcaaatcctg cggctctatt
    21541 ttcttttcca attccgacaa tccttgaaat atatccaaag acacatcttc aaatagaaaa
    21601 aaaggaggag ttagaagcgg tttttccatg atctgtccgt agattttgat tcccaagggc
    21661 gatgacgacc aattccctgt ccaggcaaag tcttgcccgt attatccgta actcgacgat
    21721 gataatgggg aaattttcca ataggatgac ctgttctatt accgaaaggg gctatccgca
    21781 tattattgcc gattttaatc tcacgtccat atttagcaaa ggaaacaacc tttcctgcgg
    21841 cacctacacc accaggaatt gcgcctaatc cgccagcaat agcaacatct ctaacagaag
    21901 ctggtctgcc tgtcgttgca taactaaaac catgctgtgt ccacatacca atggcagcac
    21961 cacccaagat agccaatgga agaaacgccc cctctgtctc cttcatctcc ttttgagaaa
    22021 gctccgccaa ctgcatcggt gcatctgccc gcgtgtggaa cacttggtct tcaaatgcct
    22081 gattgtccaa gccgtttgcc attgcggggg caatcataga cagcatcatt acggctgcgg
    22141 tgatttgttt tttcataata actcctttgg attacaaggt tggaaaatca aagccctgct
    22201 tagaacgtat gttgcacacc caatttcaat aggtaaatca gattgcaaat ccagcaattt
    22261 gaatattgtc attgttccgt gcaaaaggga tttttattga tgagttgtgt actgggtttc
    22321 agcttggctt tttagataat cttttcacaa gaacatacat caatactgtc caaaaaaaaa
    22381 gatttgataa atatattgca acatatttta ttccacctcc atccgaaaca gaaaccaata
//
LOCUS       DAXHRP010000014        21299 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.014, whole genome shotgun sequence.
ACCESSION   DAXHRP010000014 DAXHRP010000000
VERSION     DAXHRP010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21299
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.014"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(61..1947)
                     /gene="uvrC"
                     /locus_tag="ACFM72_000426"
     CDS             complement(61..1947)
                     /gene="uvrC"
                     /locus_tag="ACFM72_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HFC6257052.1"
                     /translation="MPSETVFQVIDMNKETRFPEHFDIPLFLKNLPNLPGVYRFFNES
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVREAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVRLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     EHLH"
     gene            complement(2011..4173)
                     /locus_tag="ACFM72_000427"
     CDS             complement(2011..4173)
                     /locus_tag="ACFM72_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC6257053.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAYGMAHVYFEVGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGSPQVAAVYCVPDSGFDEDALYRI
                     AAAVEQNAAHPLARAIVSAAQARGLDIPAAQNAQTVVGAGITAEVEGVGLVKAGKAEF
                     AELALPKFLDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            4312..5262
                     /gene="trxB"
                     /locus_tag="ACFM72_000428"
     CDS             4312..5262
                     /gene="trxB"
                     /locus_tag="ACFM72_000428"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HFC6257054.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            5418..5786
                     /gene="rpsF"
                     /locus_tag="ACFM72_000429"
     CDS             5418..5786
                     /gene="rpsF"
                     /locus_tag="ACFM72_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HFC6257055.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLAIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            5787..6089
                     /gene="priB"
                     /locus_tag="ACFM72_000430"
     CDS             5787..6089
                     /gene="priB"
                     /locus_tag="ACFM72_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HFC6257056.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            6096..6326
                     /gene="rpsR"
                     /locus_tag="ACFM72_000431"
     CDS             6096..6326
                     /gene="rpsR"
                     /locus_tag="ACFM72_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HFC6257057.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            6343..6795
                     /gene="rplI"
                     /locus_tag="ACFM72_000432"
     CDS             6343..6795
                     /gene="rplI"
                     /locus_tag="ACFM72_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HFC6257058.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(6988..7794)
                     /locus_tag="ACFM72_000433"
     CDS             complement(6988..7794)
                     /locus_tag="ACFM72_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC6257059.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAIMVFTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFAGALS
                     AKYIPAFGLQIFFILFLTVVAFKTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(7795..8541)
                     /gene="pssA"
                     /locus_tag="ACFM72_000434"
     CDS             complement(7795..8541)
                     /gene="pssA"
                     /locus_tag="ACFM72_000434"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HFC6257060.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(8615..9019)
                     /locus_tag="ACFM72_000435"
     CDS             complement(8615..9019)
                     /locus_tag="ACFM72_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257061.1"
                     /translation="MANRFQQRKSAYRRLSGKPLFSDGIAANLCGGRKTLSYNLSRFK
                     ISIRSEMQKISFNLLKPANSPKIGKRRPGLNGAPHIPMPSPRYLPASPEMPGNNIHPA
                     KIRNNTPGGRQSQTAPQSIRHQKNKPPPRASS"
     gene            9125..9607
                     /locus_tag="ACFM72_000436"
     CDS             9125..9607
                     /locus_tag="ACFM72_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HFC6257062.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(9659..10870)
                     /locus_tag="ACFM72_000437"
     CDS             complement(9659..10870)
                     /locus_tag="ACFM72_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HFC6257063.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            11093..13531
                     /locus_tag="ACFM72_000438"
     CDS             11093..13531
                     /locus_tag="ACFM72_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC6257064.1"
                     /translation="MIEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAGAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDEPEPLEKLPLIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSSTD
                     LNGSRKILAHKDHL"
     gene            13739..15049
                     /gene="tig"
                     /locus_tag="ACFM72_000439"
     CDS             13739..15049
                     /gene="tig"
                     /locus_tag="ACFM72_000439"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HFC6257065.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            15145..15759
                     /gene="clpP"
                     /locus_tag="ACFM72_000440"
     CDS             15145..15759
                     /gene="clpP"
                     /locus_tag="ACFM72_000440"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HFC6257066.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLRL"
     gene            15783..15977
                     /locus_tag="ACFM72_000441"
     CDS             15783..15977
                     /locus_tag="ACFM72_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257067.1"
                     /translation="MPSETFRRHLFQAAFDMVSIPSSTGRKKDLEFFKGSPFPPVMDG
                     CRLKAKWGSSFCKGATLASS"
     gene            complement(16202..17467)
                     /gene="ispG"
                     /locus_tag="ACFM72_000442"
                     /gene_synonym="gcpE"
     CDS             complement(16202..17467)
                     /gene="ispG"
                     /locus_tag="ACFM72_000442"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HFC6257068.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGLKRHQGKVIPIHSL"
     gene            complement(17483..18244)
                     /gene="pilW"
                     /locus_tag="ACFM72_000443"
     CDS             complement(17483..18244)
                     /gene="pilW"
                     /locus_tag="ACFM72_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HFC6257069.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(18247..19341)
                     /gene="rlmN"
                     /locus_tag="ACFM72_000444"
     CDS             complement(18247..19341)
                     /gene="rlmN"
                     /locus_tag="ACFM72_000444"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HFC6257070.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMIPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(19485..19910)
                     /gene="ndk"
                     /locus_tag="ACFM72_000445"
     CDS             complement(19485..19910)
                     /gene="ndk"
                     /locus_tag="ACFM72_000445"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HFC6257071.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(19969..21120)
                     /gene="zapE"
                     /locus_tag="ACFM72_000446"
     CDS             complement(19969..21120)
                     /gene="zapE"
                     /locus_tag="ACFM72_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HFC6257072.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKDSGG"
BASE COUNT         5076 a         5297 c         5820 g         5106 t
ORIGIN      
        1 atcggtatac cgacctgctg tatcatattt tttacagacg gtttttgctt gggcagcata
       61 ctaatgcaga tgctcgtaaa tggtttccgc caatgccttg ctgatgcctt ccactttttc
      121 caagtcctcg cggctggcgg caatcacgcc gcgcagaccg ccgaagcggg tgagcagggc
      181 ttggcggcgt ttgctgccta cgccggggat gtcgcttaag gaggaggtaa cgcgggcttt
      241 gtcgcgtttt ttgcggtggc cggtaatggc gaaacggtgc gattcatcgc gtacggtttg
      301 caatagatgc aaggccgggc tgttgggcgg caggcggaag acttcgccgg taaaaggcag
      361 tatgagttct tccataccgg ctttgcgttc ggggcctttg gcgataccga ccaaagggat
      421 gtgcagcccg agttcttccc ataccgatac ggctacgccg atttgccctt tgccgccgtc
      481 aatcaacacg gcatccggcc atttgacggt ctcgccgttg gcttcggcct cctgcatttt
      541 gccgtaacgg cgcgtcaaca cttcgcgcat ggcggcgtag tcgtcgccgg gtttggcggt
      601 cgtgatgttg tagcggcggt attgcgaagg ctggatgttt tgctcatcgt acacaacgca
      661 ggacgcaata gtggcttcgc cttgtgtgtg gctgatgtcg aaacattcaa ggcggttgag
      721 gccgtctgaa tccatgccga ggatttttgc cagttcatca atgcggtgtt gctggctgct
      781 ttgttgcagg cggcgttgtg caatcgccat ttgcgcgttt tgttccgcca ttttcaaccg
      841 gactttgcgt tcgcctatgg tcttggtgac aaattgcatc tgcttgccgt gttcgccttc
      901 caaagcctct tttagcgcat cgggaacggg aaagttgctg atgatgatgt cgggtttgct
      961 tttgcccaga tagtgttggg cgacgaaggc ttcggcgtaa tcttgtccgt ttggctcggg
     1021 atcgtttttg gtgtcgggga aaaagctttt gtcgccgacg tgccgtccgc cgcggatgct
     1081 gacccagtgt acgcaaacca ggccgtctga aaccgccagt gcaagcaaat cgatatcgtt
     1141 ggggttgttc gggtttttgc tgtcgatgaa ctggttgctc tgcataatgc cgagcgcttg
     1201 gatttgatcg cggtaacgtg cggcttcttc gaattgtaga ttagcggcgg cggtttgcat
     1261 tttgtgttgc agggtacgcg tcaattcgtc agttttgcca ttaaggaaag tcgcggcttc
     1321 acgcacgctg tcacgataat cttcttcact gatgtggcct acacaaggcg cggtgcagcg
     1381 tttgatttgg taaagcagac aaggacggtc gcgatgctcg aatacactgt cttcgcaggt
     1441 acgcagcata aagacttttt gcaacacttg aatgctgtcg cgcacggcgt tgctgttggg
     1501 atatgggccg aaatattgat taggcttttt cagcgtgccg cggtaatacg ccatttgcgg
     1561 atattgatgg ccgctgagca tcaaataagg atagcttttg tcatcgcgga aaagaatatt
     1621 gtatttgggc gacagggctt tgatgaagtt gttttcgaga atcagggctt cggattcgga
     1681 gcgggtgatg gtggtttcga tgtggtgaac ctgtttcacc atcaatgcga tgcgcgggga
     1741 atggtcgttt ttctggaaat agccggacac gcgccgcttg aggttgacgg ctttgccgac
     1801 gtataagacg ttgccgcttt cgttgaaaaa acggtatacg cctggcaggt tgggcaggtt
     1861 tttgaggaaa agtgggatgt cgaagtgttc cggaaaacgg gtttctttat tcatatcaat
     1921 tacttgaaaa acggtttcag acggcatatt accatatcgc tggagacagc cttatccgtt
     1981 cggacaaggc tgcagggcgg ttacatgctg ctaatcgatt tttacccgtt tcaggcgcaa
     2041 ggcattgctc aacacggaaa ccgagcttgc cgccattgcc gcgccagcga tgacgggatt
     2101 taaaaagcca agcgcggcga gaggaatgcc caaaatattg tagaagaagg cgaaaaacag
     2161 gttttgcttg atgtttttca aagtggcttg cgacaccagc agagcatcgg cgagttggtt
     2221 gaccgaatgc tgcatcagcg tggcggatgc ggtatgttcg gcaacgtccg ctccgccttt
     2281 catggcgaag ctgacgttag cggcggcaag cgcgggcgcg tcgttgatgc cgtcgccgac
     2341 catcgccacg gttttgccgg cggctttgag tttttgcact tcggcagctt tatcgcgcgg
     2401 actcatgttg ccgaaggcgt gtgcgatgcc cagttgtttg gcgacgtatt cgaccgtgcc
     2461 ttggttgtcg ccgctcataa tatagacatc gatattgtgt tttttcagac ggcctatggc
     2521 ttcggcggta tcggctttca acgcgtcggc aagtgcgaat gcgccgatgg gtttgttatc
     2581 gactgagacc gcaacaatgc ttgcaatatc ccaaacgccg tctaaaaact tcggcaaggc
     2641 cagttcggca aattcggctt tgcctgcttt caccaaaccc acgccttcca cttcggcggt
     2701 aatgcctgcg ccgacaacgg tttgtgcgtt ttgtgcggcg ggaatgtcca aaccgcgcgc
     2761 ttgggcggcg gagacgatgg cacgggcgag cggatgggcg gcgttttgtt cgacggcggc
     2821 ggcgatgcgg tacaaagcgt cttcgtcaaa gccgctgtcg ggaacgcaat aaacggcggc
     2881 aacctgcggg ctgccttcgg tcagcgtacc ggttttgtcc aacacgacgg catcgacgtg
     2941 ggcggcttcc tccattgctg ccgcgtcttt aaaccaaata ccgtgtttaa ccgctttgcc
     3001 cataccgacc ataatcgcgg caggggttgc cagacccagc gcgcacgggc aggcaatcac
     3061 caaaacggcg acggcgtgca tcagcgcaac cgtccaatcg cccttaatca gccaagtaac
     3121 aataaaagtc aacaacgcaa tgcccacgac ggcaggcacg aataccgcag ccgctttatc
     3181 ggctacgcgc gcaatcggtg ctttactgcc ttgtgcttca gagagcgcgt tcatcatgtc
     3241 gccgagctgg gtttggctgc cgagctgcgt ggcgcggtac accacactgc cttcggtcat
     3301 taacgcgccc gccaacactt tgccgcccgc ctttttttct tcaggattgg attcgccggt
     3361 aagatggctc tcgtccgccc aaccgctgcc gctttcaatg atgccgtctg cggcaatgcg
     3421 ttcgccgtgg ttggcgcgga taaggtcgcc gatttgcact tggtcgatgg gaagctgttt
     3481 ccattcgccg ttgcgttgca cgttgacttg ggttggtgta agtttgagca gcaagcccaa
     3541 gctgttgagg ctggattttt tggtacggtg ttccaaaaat ttacccagtg acacaaaacc
     3601 gatcaccatc acgcccactt caaaatacac atgcgccata ccgtacgccg cgtgcgggct
     3661 gaaaaacagc atatagacgg aatacaggta aatcgagacc gtgccgatgg taaccagcac
     3721 gtccatattc gccagtccgc ccttaatgct cgcccacgcg cttttgtaaa acgggattgc
     3781 cagccaaagc tgcaccacgc ttgccaatgc gaactgccac aacggcggaa tcatccaatc
     3841 gtgtctgccg atcatcatcc ccgccatgcc gataaggaac gggacgttga tggtgaacag
     3901 cagccacagc cgccagccga tatggtgttc tgcttcgggt tgcggcaatg tatcttccgt
     3961 tttttccttc gcgccgtaac cggttttctc aatgattttg gcaatgtcgg ctactgaggt
     4021 tttgctgtcg tcaaacacta cctgcgcctc ttcgctggcg aagtttaccc ccgccgattc
     4081 gacaaaatct tttttgttca acactttttc aatgcgcgaa gcgcaggcct ggcaggtcat
     4141 gccttcgatt tggaaacgga ttttttgttg cataagcgtg attcctgctt tgatattcag
     4201 acggcagtta aggctgcggg atgccgtctg agtgccggta tggtcgaaat ttctcaaacg
     4261 cgccgataat tcgagtagaa tccgaaaact tgacacagca aaggaaaaac aatgtcccaa
     4321 caccgcaaac tgattatttt gggttccggc cccgccggat acaccgccgc cgtctatgcc
     4381 gcgcgcgcca atttaaaccc cgtcattatt acaggtatcg cgcaaggcgg gcaactgatg
     4441 accaccaccg aagtggacaa ctggcctgcc gatgccgacg gcgtgcaagg gccggaattg
     4501 atggcgcggt ttctcgccca cgccgaacgt ttcggaacgg aaatcatttt tgaccaaatc
     4561 aacgccgtcg atctgcaaaa acgcccgttt acactcaaag gcgatatggg cgagtacact
     4621 tgcgatgccc tgattgtcgc aacaggcgcg tccgccaaat acctcggttt gccgagtgag
     4681 gaagcgtttg caggaaaagg cgtttccgct tgtgccacct gcgacggttt cttctataaa
     4741 aaccaagatg ttgccgtagt tggcggcggc aatacggcag ttgaagaggc actctacctt
     4801 gccaatatcg ccaaaaccgt taccctgatc caccgccgca gcgagttccg tgccgaaaaa
     4861 atcatgatcg acaaactgat gaaacgcgtg gaagagggca aaatcatcct caagctggaa
     4921 agcaacctgc aagaagtact gggcgacgat cggggcgtaa acggcgcatt attaaaaaac
     4981 aacgacggtt ctgagcaaca aattgccgtc agcggcattt ttatcgccat cgggcacaag
     5041 ccgaataccg atattttcaa aggtcagttg gaaatggacg aagccggtta cctgaaaacc
     5101 aaaggcggca cggcggacaa tgtcggcgca accaatatcg aaggcgtatg ggcggcgggc
     5161 gacgtaaaag accataccta ccgtcaggcg attaccagcg cggcttccgg ctgtcaggcg
     5221 gctttggacg cggaacgctg gctgggcagc caaaacattt gaatgccgtc tgaaaccgaa
     5281 attttcggcg gaatgcaaat ttttcgcacc aaatccttga ttccgtcggc aaaccccaat
     5341 ataatgccgc ttctttaaac cttgccttct gctttcgcat ggcagaaggc tgtttttacc
     5401 atccataagg agataacatg cgtcattacg agatcgtgtt tatcgttcat cccgatcaaa
     5461 gcgagcaagt acccgctatg gttgaacgtt acaaaaccat gattgccgaa gcaaacggta
     5521 agattcaccg tctggaagac tggggtcgcc gccagctggc ttacccgatt aacaaaatcc
     5581 ataaagccca ttacgttttg atgaacatcg aaaccactcc cgaagtggtt gaagagctgg
     5641 aaaccgcatt ccgcttcaat gatgcagtat tgcgtcatct ggccatcaaa accaaacacg
     5701 ccgttaccga agcatcccct atgttgggtg gtgaaaaggc taagaacctg ttgagcggtg
     5761 cgtctgaaga agcggtcgcc caataattgg gattcaataa tcttgtttcg cttgccgcgt
     5821 taattgaaaa ggttttccct attcgatata cgcctgccgg aatccctgtt ttagatatta
     5881 ttttaaagca cgaatcgtgg caggaggaaa acgggcagca atgccttgtc caattggaaa
     5941 ttccggcacg gattttaggc aggcaggcgg aagagtggca gtatcggcaa ggtgtatatg
     6001 ttcacgtcga aggtttttta gctcaaaaaa gcagacgttc ccttatgccg atgctcagga
     6061 tacaaaatat tcaagaatat aaaggttaaa cgacaatggc tcgtcaatca ttcaaacgta
     6121 gaaaattctg ccgtttcacg gctgaaaaaa tccaagaagt cgattacaaa caagttgatt
     6181 tgctgaaaga cttcatctcc gaaaacggta aaatcattcc tgcacgcatc acaggaacga
     6241 aggcattcta ccaacgccaa ttggctgttg ccgtaaaacg cgcacgcttc ctggctctgc
     6301 tgccttacac cgaccaacac aaataatttt ggagattgaa tcatgcaaat tattctgtta
     6361 gaaaaaatcg gcggtctggg caacttgggc gacatcgtaa ccgttaaaaa cggctacgcc
     6421 cgcaactttc taattcccgc aggtaaggca aaacgtgcga ccgaagcgaa tatgaaagag
     6481 tttgaagcac gccgcgcaga actggaagcc aaacaggctg aaattttggc agatgcccga
     6541 gtccgtcagg aaaaattgga cggtcaaacc gttaccgttg ctcaaaaagc tggtgtggac
     6601 ggtcgcctgt tcggttccgt taccaatgcc gacattgctg ctgcaatcgt tgctgccggc
     6661 atcgaagccg tgaaagcaaa tgtacgtctg ccgaacggtc ctctgaaagc cgttggcgag
     6721 tacgaagtgg aagtggcttt gcacactgat gccgttgcta aaattaccgt tgccgtcgtt
     6781 gccgcaaccg agtaattgaa attatcagat gccgtctgaa accctgccga ttgtcggaat
     6841 gtggtttcag acggtatttg ttttgttttt cgtatattct gcaaaggtct cggtcaggtt
     6901 gtctgtcctt ttgtcggaac aggagactgg gcagctttgt cctgattaat tgcttgtgca
     6961 aacggtaaaa aggttttttc gtgtgtttta aagcaggttg tacagcattt ttccggcaat
     7021 caaaagcaac ataatgccga aggatttttt gagtttggca gaagaaagtt tgtgggcggt
     7081 tttgacaccg agcggggcaa aggcaatggt tgccgcgctg aggacggcga cggcgggcag
     7141 gtaaaggaag cccagcgacc cttcgggcaa tcctgcaata ttcaggccgt tgagcagata
     7201 cgatattgcg ccggagagtg caatcggcca ggcaaggccg gatgatgtgc cgatggcttt
     7261 atgggcgggg aagccgcagt ggattaagaa ggggacggaa agtgaaccgc cgcctatgcc
     7321 gacccagctc gacattgcgc cgaacagtgt ggaaaccgca gtcagtccgg gcagcttggg
     7381 cagcgggcgg gatgccgtct gagggccggt atgcagtgtt ttgaatgcga cgacagttaa
     7441 aaacaggatg aagaagattt gaagcccgaa tgcggggata tattttgcgg agagtgcgcc
     7501 cgcgaatacg ccgaatatca tacccggcat catcgcaaat acggttttcc agtcgaccgc
     7561 tcgttttttg tgctgcccca acatactgga aaaggcggtg aagaccatga tggcgaagga
     7621 tgtgccgacg gcgaggtgtt gcgcgtaagg atgttgtgcc aaaccctgca aatcaagcac
     7681 ccataaaacg acagggacaa tcagcgtgcc gccgcctacg ccgaacaggc cggcgataaa
     7741 acctgccgca ctgcctacgg caagcaggat taagataatg tcccaatgcc acatttaatc
     7801 cgcctttctg tattttttcc agaatcggcg tgccgccata atgtagccgg acaggctgta
     7861 tccgagaaag aacaggaaga ggacgagcga cggttcccaa gtgaccagaa gcagcagtaa
     7921 gacggcaagc agcattccga caaaggggac ttgtctgcgg atgttgattt ctttaaaact
     7981 ccaaaaaggg atttggacaa tcattgacag gccggcaaac agtgtgatgc ccaatgccca
     8041 ccagtggacg gcggggaatt tttcgacgct gtggttgacc caaatcagcc cgacaatcag
     8101 cgcggcggca gtcggactgg gcacgccgat aaaccagcgt ttgtccacct tgccgatgag
     8161 cgtgttgaac agggcgaggc gcagggctgc gcaggcgcag tagatgaagg cgacggaata
     8221 accgattttg ccgaactgcc aaagctgcca tttgtaggca ataagcgcgg gggcaacgcc
     8281 gaagctgacc atgtcggcaa ggctgtcgag ctgctccccg aacgcgcttt ggctgttggt
     8341 cagccgcgcc acgcgcccgt ccataccgtc caaaagcatg gaaatgaata cggcaatagc
     8401 ggcggtttca taacgtccgt gcatggattg ggtgattgcg taaaacgcgg aaaacagcgc
     8461 ggcgatagta aaggaattgg gcagcaggta gatactgttt tgacgcaggg agcgttgcgg
     8521 ggtgttggtc ggggtttcca tagctgaagt gtctcacgga cgtggagaat cgatagggga
     8581 ttataaccca aaccattatc gaacaatacg ccctttagga tgaagccctc ggaggcggtt
     8641 tgtttttctg atggcggatg ctttgcgggg cggtttgact ctgcctgccg ccgggtgtgt
     8701 tgtttcggat ttttgccgga tggatgttgt tgccgggcat ttctgggctt gccggaaggt
     8761 atcgggggga gggcatcgga atatgcggcg cgccgttcaa accggggcgg cgtttcccta
     8821 ttttcgggga gtttgcaggc ttcaacaaat tgaaagatat tttttgcatt tccgaccgta
     8881 tgctgatttt gaaacgggat aaattatagg acaaggtttt tcgcccgccg caaaggttgg
     8941 ccgcaatgcc gtctgaaaac aacggcttgc cgctaaggcg gcggtatgcg gatttgcgct
     9001 gctgaaatcg gtttgccata cccggcggtg caatctgcgg ggagggataa gccgataagg
     9061 cgggacttat cctgtttttt gtttataatg caacagaatt tggacgaacc gtcgggaatt
     9121 tatcatgatg aaaaagatac tggccgtatc ggcactatgc ctgatgactg cggcggcacg
     9181 ggctgccgat acttacggct atctcgccgt ttggcagaat ccgcagaatg cggacgatgt
     9241 tttgcaggtt aaaaccacaa aagaagattc gacgaaaagc gaagcgtttg ccgagttgga
     9301 agccttctgc aaaggtcagg acacgcttgc gggcattgcc gaagacgagc cgaccggatg
     9361 ccggtcggtc gtgtcgctga acaatacctg tgtcgcgctg gcatacccga aagccttggg
     9421 cgcgatgcgc gttgaaaacg ccgtcgtgat tacttctccg cgttttacga gcgttcatca
     9481 ggtcgcactc aaccagtgca tcaaaaaata cggcgtacag ggacaatgcg gcttggaaac
     9541 agtgtattgc acatcttctt cttattacgg cggaactgtg cgctctttga ttcaaaatct
     9601 caaataaaac ggaaaatgcc gtctgaaaga tgttcagacg gcatttctat atcgacggtc
     9661 aggattcttt cggatcgggc agcaggctgt tcaacataat ggcaagtacg gcgcacaagc
     9721 ccacgccggc aaagctgaag ctgcccaatt tgagcgtcat gccgccgatg cccgtggtca
     9781 gtaccgagct gacgatgacc aggtttttcg gcagcatcaa atcgactttg gcatcaatca
     9841 gcgttttcac gcccaaagaa gcaatcgtgc cgaacagcag cagcataatg ccgcccatta
     9901 ctggcatcgg aatggaagcc aaaaacgcat tgaatttgcc gaaaaacgcc atgcagacgg
     9961 caaaaaccgc cgcccaagtc atgatgacgg ggttgctgtt tttggtaatc atcaccgcac
    10021 ccgttacttc gccgtaggtc gtaaccggcg ggccgccgat cagacccgca acgcatacgc
    10081 ccaaaccgtc gcctgcaagg gttttgtcca agcccgggtc tttcgtatag tctttccccg
    10141 tcacattgcc gattgccatg atgccgccga tgtgttcgat ggcgggggcg acggcaacgg
    10201 gcagcataaa cagtgcagcc tgccagttga cctgaggcgt ttcaaaatgg ggaacggcga
    10261 accagggcgc gtgtgcaatg cttgccgtgt ccaccagtcc catcagcagt gccaaaacat
    10321 aacccgaagc gacaccgatc aagatgggaa tcagcttcat catcctgctg ccgaaaaccg
    10381 atacgatggc ggtaacggca aaggtaaagc cggaaagaat cagcgaatcg gtatagtcga
    10441 tgacctgttt gccgtccgcc tgacccattg ccatgctgct tgccgccacg gcaacagaca
    10501 gaccgatgac catgatgacg gggccgatga cgaccggagg cagcagtttg tgtaccgctg
    10561 ccagtccgcg ccaacggatc agcgcggcaa acacaaaata cataaagccg gcggcaaaca
    10621 gtccgaacat ggtggaaggc agcccccatt cgccgacgga gtagataatc ggtgcgataa
    10681 aggcaaacga agaaccaaga aaaatcggca ctttgcgttt ggttgtgatt tggaacagca
    10741 gcgttcccaa gcctgcgccc aaaagcgcaa gagccggatt cagaccggtc agcaggggaa
    10801 ccagcaccat tgcgccgaat gccacaaata aaatctgcgc gccggaaacg gcaagtttca
    10861 gttggttcat accatcttct ttcaatcggt tcaaacggca cggattatac tggtttgccg
    10921 agggtctgcg taaaaataca tatggcgggc aacagatatg ccgtctgaaa ggcaatgtct
    10981 gtctgttgca ggatgaaagc aggagaaatg gagtataatc cgacactttc catattcaat
    11041 ccgcaagccg tccggcttcc ttattgcaga cggcattttc cggtaatacg gcatgataga
    11101 aaaatcccat aaaaaaacag caaaaggcag ggcgggaagc ccgtccccaa cgtccgcacg
    11161 caacaagaaa gccgacaacg gcgcacgggg caataaagtt tccgagcggc tcaaagcggt
    11221 caaagagttg cagaaaaccg aaaccaaaaa ggcgcgtccc gaacatgtcg tcaaccttat
    11281 cggcgacgca ctgtggctga tgggtttggc ggcaaccttg tatttggcga tttccctgat
    11341 tagtttcgat atgggcgatc cgtcttggtc gcacagttcg ccggttgtgg aagatgtcgc
    11401 caattggggc ggactgttcg gcgcgtatgt tgccgatgtc ggctattatc ttttcggctg
    11461 gtcgttctgg tggtggatag cggctgcctg cgtcatgctg tataaaaatt ttcgtctgca
    11521 cgcaaaacag acggaaaacg aggcatacaa ccacaaaatc gctgccgccg cgctgtttgt
    11581 cctgacggtc ttcagccccg tcttggagta ttttgtgctg ggcggaaaat atgccgactc
    11641 cctgcctgtc ggagcaggcg gtatggtcgg catacgcgtc ggcgcagtgt ttgcgtggct
    11701 gctggggaaa tcgggcagcc tgctgattat cttggttgtt ctgctgttgt cgttgtccct
    11761 gctggtgcag atttcatggc tggaattttt gaacggtgcg ggcagggcgg ttcaaaaccg
    11821 cctgagtgcc ttatccggca aggtcatggc tttgggaaaa cgccggccga ataccaaaac
    11881 agacggtgtc gatacccaaa atacacggcg catggtaaaa gaagccaaga atattacggc
    11941 caaacccgtt gccttgcccg aaggcagcag cagcaaccgc aaatccgtcg cggtttccgt
    12001 cgcgccgccg cccaaaattc aggtttctct gtttgaagat gacgaacctc ggcaggcggg
    12061 cgaataccac aagcctacat tgaacctatt gcggattcct gacagcgaac ccgtcagcat
    12121 caatcccgcc gaattggagc gcactgccga actgatcgaa tccaaactgg cagaattcgg
    12181 catcggcgta caagtcgtat ccgccacatc cggccccgtc atcacgcgct acgaaatcga
    12241 acccgcgcaa ggtgttaaag gcagccaaat tgttgccttg tcgaaagatt tggcacgctc
    12301 tatgtcgctg cagtccgtgc gtatcgtcga aaccatcgca ggtaaaaaca cgatgggcat
    12361 cgagttgccc aacgacaaac gccaagacgt gatgttgagc gaaatcttgt cctcgcccgt
    12421 gtttgccgga gccaaatcca agctgaccgt cgcgctgggc aaagacattg ccggtacccc
    12481 cgttgtcggc gacttggcga aaatgccgca ccttttggtc gccggtatga ctggttcggg
    12541 caagtccgtc ggcgtgaacg gcatgattat gtctatgctt ttcaaagcta cgcccgacga
    12601 agtccgcttc attatgatag acccgaaaat gctcgagttg agcatttacg acggtattcc
    12661 gcacctgctc tgtcccgtcg tgaccgatat gcgcgaagca gggcaggcgt tgaactggtg
    12721 cgtcgccgaa atggaaaaac gctaccgcct gctttcccat gccggtgtgc gtaatttgga
    12781 gggcttcaac caaaaagtcg aagccgcaaa agcggcaggc aagccgctgc tcaatccgtt
    12841 cagcctgaac cccgacgagc ccgagccgct ggaaaaactg ccgttgattg tggtcgttat
    12901 cgacgaactt gccgacctga tgatgaccga acgcaaagcc gtcgagcagc aaatcgcccg
    12961 tctcgcccaa aaagcgcgcg ccgccggtat ccatatgatt gtcgccaccc aacgtcccag
    13021 tgtcgatgtc gttaccggcc tgattaaagc caacatcccg acgcgtatgg cgtttaccgt
    13081 gcaaagcaaa atcgacagcc gtaccatcct cgaccaaatg ggcgcggacg aactgctcaa
    13141 atatggcgat tcgctgttcc tccagcccgg cagtgccgaa ccgactcgcc tgcaaggcgc
    13201 gtttgtttca gacgacgaag tacatcaagt cgtcaactac gtcaaatcgc aagccccagc
    13261 cgactatatt gaaggtctgc tcagcggcga ggccgcgctg gaaactgcca atatcgttaa
    13321 tccgaatgca gacagcgacg aattgttcga tcaggcagtc gcctatgttt tggaaagcaa
    13381 aaaaacctcc atttcgtctt tgcagcggca gctgcgcatc ggctataacc gcgcggcaaa
    13441 cctgatggag gcactggaaa atgcgggtgt cgtttcttcc accgacctca acggcagccg
    13501 taaaattttg gcgcacaagg accatttgta gctcgtattg caaaatgccg tctgaacggc
    13561 ggaattggcg tttcagacgg catattatgt ttcaggcgaa acattgtgat atacttgcca
    13621 gctaaaattt cccctttgcg gcaatgcggt tcaaatatcg taccgttgcg ctgtttgctt
    13681 ccccatgtag ggaagaaagt ttatcatttt atcaacacaa caaatttaag ggcttatgat
    13741 gagcgtaact gttgaaactt tagaaaatct ggaacgcaaa gtagtgttgt ccctgccttg
    13801 gtccgaaatc aacgcagaaa ccgataaaaa actgaaacaa acccaacgcc gtgcaaaaat
    13861 cgacggtttc cgtccgggta aagcaccttt aaaaatgatt gcccaaatgt acggtgcgag
    13921 cgcacaaaac gacgtgatca acgagctggt gcaacgccgc ttctacgatg ttgccgttgc
    13981 ccaagagttg aaagtggcag gcttcccccg ttttgaaggc gttgaagaac aagacgataa
    14041 agagtctttc aaagttgccg ccatttttga agtgttcccc gaagtcgtta tcggcgattt
    14101 gtctgcacaa gaagttgaaa aagtaaccgc ttccgtcggt gatgccgaag tggaccaaac
    14161 cgtagaaatc ctgcgcaaac aacgcacccg cttcaaccat gtcgaacgcg aagcccgaaa
    14221 cggcgaccgc gtcatcattg actttgaagg caaaatcgac ggcgaacctt ttgccggcgg
    14281 cgcatccaaa aactacgcct tcgtattggg cgcaagtcaa atgctgcctg aatttgaagc
    14341 cggcgtagtc ggcatgaagg ctggcgaaag taaagacgtt accgtcaatt tccctgaaga
    14401 ctaccacggt aaagacgttg ccggtaaaac tgccgtgttc accattacgc tgaacaacgt
    14461 ttccgaagcg actctgcctg aagtcgatgc agattttgca aaagccttgg gtattgcgga
    14521 tggcgacgtt gccaaaatgc gcgaagaagt gcagaaaaac gtaagccgcg aagtggaacg
    14581 ccgcgtaaac gaacaaacca aagaatccgt aatgaacgcg ctgctcaaag ccgtagagct
    14641 gaaagcacct gttgctttgg tcaatgaaga agccgcacgc ttggcaaacg aaatgaaaca
    14701 aaattttgtt aaccaaggta tggctgatgc tgccaacttg gatctgcctt tggatatgtt
    14761 caaagaacaa gccgaacgcc gcgtgtcttt gggtctgatt ttggccaaac tggttgatga
    14821 aaacaaactg gaaccgactg aggagcaaat caaagccgtt gtcgccaact tcgcagaaag
    14881 ctacgaagat cctcaagaag taatcgactg gtactacgca gagccttccc gcctgcaagc
    14941 cccgacttct ttggcgatag aaagcaacgt cgttgatttc gttttgggta aagccaaagt
    15001 aaacgaaaaa gctttgtctt ttgacgaagt gatgggcgcg caagcctgat tatcctgaaa
    15061 atgccgtctt agggcagttt ttgaaagcac cgaagccgct tttaaagccc gctttggtgc
    15121 ttttacatca tgaaaggaga cgaaatgtct tttgataact atcttgtccc taccgttatc
    15181 gagcagagcg gtcgcggtga gcgtgcattc gatatctatt cccggctttt gaaagagcgc
    15241 atcgtattct tggtcggccc ggtaaccgac gagtccgcca atctggtggt tgcccaactg
    15301 ttgtttttgg aaagtgagaa tccggataag gatattttct tctatattaa ctcgccgggc
    15361 ggttcggtaa cggccggtat gtcgatttac gacaccatga attttatcaa gcccgatgta
    15421 tcgactttgt gcttggggca ggcagcaagt atgggcgcgt tcttattgtc ggcaggcgaa
    15481 aaaggcaaac gtttcgccct gcccaacagc cggattatga ttcaccagcc tttaatcagc
    15541 ggcggcttgg gcggtcaggc atccgatatt gaaattcacg cacgcgaact gttgaaaatc
    15601 aaagaaaaac tcaaccgcct gatggcgaaa cattgcggcc gcgatttggc agatttggag
    15661 cgcgacaccg accgtgataa tttcatgtcc gccgaagagg ctaaagaata tggtctgatt
    15721 gaccagattt tggaaaaccg cgcttctttg cggctttaat aaaagaaacc tgagagaaac
    15781 cgatgccgtc tgaaacgttc agacggcatt tgtttcaagc tgcgtttgat atggtatcga
    15841 taccgtcatc cacgggacgg aagaaggatt tggagttttt taaaggatcc ccgttcccgc
    15901 ctgtgatgga cggatgccgt ctgaaagcca aatggggcag cagtttttgc aagggcgcga
    15961 cactcgcatc ctcctgaatc tgccggtacg gttattgaga aaagacaagg gcaggaagcg
    16021 gtatcccgcc ttccttattt atacctgcaa ttcatctccg tatttgccga ttgtattttc
    16081 atattgcgcc tccattcctt atcggtttaa aaaaatgcct tttccaatgg gatgggtttt
    16141 atatcaatga aaataaacgg tttttattta aaaatagcca aggtaggctg gcggttggat
    16201 tttataggga gtgtatcggg ataaccttcc cttgatggcg tttgagtccg ttctccccat
    16261 aattggtttt gacatactct tcaacaatag ccagaaattc cgttgcaatg ttgtcgcctt
    16321 tcagcgttac tttacgttca ccatctacat aaacaggggc aacgggtgtt tctcccgtac
    16381 cgggcaggct gatgccgatg tcggccaatt tgctttctcc gggcccattg acaacgcagc
    16441 ccattacggc aacgttcagg gattcaaccc caggataaag ggtacgccat atagacattt
    16501 tttggcgcag gtaattttga acatcttgtg ccagctcttg aaatacggta ctggtggtac
    16561 gcccgcagcc ggggcaggcg gtaaccatcg gcgtaaacga acgcaatccc atagtctgta
    16621 aaatctcttg cccgacgacg acctcctgag tacgcgggct gccaggttcc ggagtcagtg
    16681 aaatgcggat ggtgtcgccg attccttctt gaagcaagac ggataatgcc gccgttgatg
    16741 cgacaatgcc tttgctgccc ataccggctt cggtcaaacc caaatgcagc ggataggcgc
    16801 aacggctgcc cagttcgcgg taaacctgaa tcaaatcctg aaccgcgctg actttgcacg
    16861 acaggatgat tttgtcttcg ggcagtccca atagaacggc tttttcggca gattccaaag
    16921 cggagacaat cagtgcttcc ttcgtcactt cttcgggcgg tttcggcgcg gaagaagcga
    16981 ggttggcatc catcatacgt ttggcgaggc tttgatccaa agaaccccag tttacgccga
    17041 tgcggacggc tttatcgttt tcagcagcag tccgaatcat aaaggcaaat ttttcatcgc
    17101 cttttacgcc tttgccgaca ttgccgggat tgatgcggta tttggacaat gctttgccgc
    17161 attctggaaa ttccgccaac aggcgttcgc cgttgaagtg gaaatcgccg ataagcggtg
    17221 tggcatagcc catatcgtcc aagcggcggc ggatttcggc aactttggac gcggcttcgg
    17281 ggctgttgac ggtaatacgc accatttcgg atccggcatc gctcaattcc ttaatctgca
    17341 atgcggtggc ttttgcatcg gcagtgtcgg tgttggtcat agattggata acgacgggtg
    17401 cttctgaacc gacggtaata tgatcgatgc ggacttgatg cgtcttgcgg cgttggagtg
    17461 tgttcatatg gtttgaatct gtttattgac cggtgaggac ggtttgcaat tcttccgagt
    17521 aggggaaatt cgcctgcaat tgtgcttcat attcgtatgc cgcctgtgcg ttgccgaggg
    17581 ctttggcaat tttccagcct agcagcaaat catcggcctg aaggacttct accctgcttt
    17641 ggtatttttt aaagtagtaa tcggcatcgc ccaactgccc ggccagcatt ttggtgcgcg
    17701 ccagttcttt aaatgcgggt gggaactgcg gctgggcggc gagggaacgt ttcaaatagg
    17761 cttccgccaa tccgaattgc ccctgttttg cgctgcatat gcctttattc aggttggcaa
    17821 tataaggggt cgggtaggtg gggtcggcca gggctttgtc gaaatatgcc atagattcgg
    17881 cagggcggtt gagcctgccg cacaggaacc agccgtagtt gttgttgatt tcggcactgt
    17941 cgggtttgat ggagagggct tgccggaaac tttcctgcgc cttgtcgtta actttcaggt
    18001 attgatagat ttcggcacgg accagccagg caagctcgtt tttagggtct gatttcaagg
    18061 cgtcttcaat acttgccgtc gcctgacggt agtcctgacc gcgcatatat tccattgcca
    18121 actgggtttt gatattggaa acctgattgg ctttttctgc ccgcgagggg cggtaggaag
    18181 tgctgcacgc gcccaaggca aggacaagta ataaagagat tcgtttggat ggcttaaaag
    18241 gcataattac ccctgttgtc cgattaaaat ctgctgccat ttttgttggc ggcgcgtttt
    18301 atcctgaacc tgccccgcca actgtccgca ggcggcatcg atgtcgtcgc cgcgcgtttt
    18361 tcgtacggta acgacaaatc ctgcctgctg caaaatatcg cggaacacac ggatgttctc
    18421 attgctggag cgttcgtatc cggagtttgg gaagggattg aacggaatca gattgaactt
    18481 gcagggaaca tctgtgacca gttcgatcag ttcgcgcgca tgttgcgcct tatcgtttat
    18541 tccgtccaac atgacgtatt cgaaagtgat gaaatccctg ggtgctttga ccagatagcg
    18601 ttggcatgcg gccatcaatt ctttcaaggg atattttttg ttcaacggta cgatttggtt
    18661 gcggacttcg tcattggaag cgtggaggga aaccgccaaa gccaccggca tgacatcgcg
    18721 caacctgtcc atttggggaa tcatacccga agtggaaacg gttacgcggc ggcggctcaa
    18781 accgtagccg tggtcgtcca gcatgatgct taaggcggta acgacattgt cgaagttcgc
    18841 catcggctcg cccatgccca tcatgacgac gttggaaatc acgcgctcgt ttttcggtgt
    18901 aacgcccatc gctttgtttg cccaccacaa ttgcccgatg atttcggcag cagtcaaatt
    18961 gcggttgaag ccctgccggc cggtcgaaca aaatgtacat tccaaagcgc agccgacttg
    19021 tgaggaaatg cagagcgtgc cgcgatccga ttcggggatg aagacggttt ccaccccgtt
    19081 gcccgtaccg acatccaaaa gccattttcg agtgccgtct gaagattttt gagacatcat
    19141 cagcttggga atttcgatgc ctgcctgttc gttcagttta tggcgcaacg attttgccaa
    19201 atcggtcatt tcgttaaaat tttgcgcgcc ggattggtgc atccaacgca taacctgttt
    19261 ggcacggaaa ggtttttcgc ccatatcggc aaaatgtcgg gtcagccctt gaaggtcgta
    19321 gttgagcaga ttggttttca tgtgtttgtg tttttcttaa atcaaggctt caaataaaaa
    19381 attgcagggc aggcaagttt gatttgaagc cttttgcaac agagttttca gacggcatgg
    19441 atatatttta tgccgtctga agaggagttg tgcggtgtat tgtatcaacg ggggcagatt
    19501 tcggtttggc tgaaaaagta ggcaatttcc aaagcggcat tttccggagt gtccgagccg
    19561 tgtacggcat tgatgctgac cgaagtggca aagtccgcgc gtatcgtgcc ttcggcggct
    19621 tcggcgggat tggtcgcccc catcagttcg cggtttttca gaacggcgtt ttcgccttcc
    19681 agtacttgaa tcataaccgg accgccggtc ataaattcaa ccaatccggc gtagaagggg
    19741 cggtctttat gaaccgcata aaattcttgc gcctctttga gggtaagctg cttcattttg
    19801 gcggcaacga ttttcagacc gttctcctca aagcggctgt atattttgcc gatgacgttt
    19861 ttgccgacgg catcgggttt gatgatggag atggtacgtt caatcgccat gctatatcct
    19921 tatttttact taagaagaat caaatcggta ttctatcaaa aaaataactt atccgcctga
    19981 atccttggga gatagggtca ggtgcggctg ttccaaataa acttcggact gcatttcgac
    20041 catccggctg gcggtgcggg taaattcttc ggcaaaatcg ccttccgtat agatatggtt
    20101 gacatctacc gcgccggtgg cacacagttt gacccggaaa tcgtagagta cgtcaatcag
    20161 ccaagtcagc cgccgcgcct ccgccttttc ttgcggtgag agttgttcca aacctgaaat
    20221 aaaaaccatt tcataatgtt cggccaaata cagatagtcg gactgtgagc gggggccgaa
    20281 gcacagtgcg cggaaatcaa accatatggc acggccggac tcggctttgt ggggaatctc
    20341 ccgaccgtgg atggtgctga tgccggggtt caaatcggta atgcctgtca tttctttgaa
    20401 cagttttgcc agttttgcct cattttcttc attggcaggc gtaaagaaaa tctcggcggg
    20461 gcggagggta cgcagtcggt agtcttcacc gccgtcaacg tttaagacgg tcaggctgga
    20521 ctcgatgagc gcgattgtgg gaagaaaact gctccggttt tgaccttgcg ggtagagttc
    20581 ggaaggcgcg tagtttgaag tcgccaccaa aacaacgccc tcgttaagca ggttttccag
    20641 cagacggcct aaaatcattg catccgcaat atcgctgaca tgaaattcgt caaaacataa
    20701 tacgcgggtt tctttggcaa tctcggcggc aacggatttc aacgggttgc tttcgctttt
    20761 cagggttttc agcctctggt ggatttctgc cataaaggca tgaaagtgga cgcggcgttt
    20821 gcggcggtaa gggaggcagc cgaaaaaagc gtccatcaga aagcttttgc cgcgtccgac
    20881 cccgccatag aaataaagcc ctttggggac ttgcggggaa cgcaaactcc tgcctaaaaa
    20941 acggtttctt ttgcgtttga acatcatcaa ttcggtccaa agccgatcga ggtgttcgat
    21001 ggcggctgcc tgcgcgtcgt cgcggatgaa gttgggcagt tgtgaggcag cctgatacca
    21061 ggtcagcggg ctgtggtttt caaacggcgg ggctttaaaa agttggtctc tattactcat
    21121 atttaacctt gttatacttc ttgcggcgga gaaagaaaat gcttaccgtc ggtattataa
    21181 atgatttcct tcaaacttgg cgttttccgt ggaaaagaat aatgacgcgc acaagggggg
    21241 tatgagcaaa ggcggcgttt caatatggtg cagatatgag ctcaaatgcc ttttatagt
//
LOCUS       DAXHRP010000015        21155 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.015, whole genome shotgun sequence.
ACCESSION   DAXHRP010000015 DAXHRP010000000
VERSION     DAXHRP010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21155
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.015"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(197..4366)
                     /locus_tag="ACFM72_000447"
     CDS             complement(197..4366)
                     /locus_tag="ACFM72_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HFC6257073.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTESGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGSFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTLWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLGIANAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4421..6268)
                     /locus_tag="ACFM72_000448"
     CDS             complement(4421..6268)
                     /locus_tag="ACFM72_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HFC6257074.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSAVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLTGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6680..7909
                     /gene="sstT"
                     /locus_tag="ACFM72_000449"
     CDS             6680..7909
                     /gene="sstT"
                     /locus_tag="ACFM72_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HFC6257075.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8021..9298
                     /locus_tag="ACFM72_000450"
     CDS             8021..9298
                     /locus_tag="ACFM72_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC6257076.1"
                     /translation="MFERSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNSAESANQTGNNQPADSSDSAPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLT
                     HCKGDSCNGDNLLDEEAPSKSEFENLNESERIEKYKKDGKSDKFTNLVATAVQANGTN
                     KYVIIYKDKSTSSARVRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIF
                     APEGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHTENGRSYPT
                     RGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRFY
                     GPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9374..9589)
                     /locus_tag="ACFM72_000451"
     CDS             complement(9374..9589)
                     /locus_tag="ACFM72_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257077.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9582..9797)
                     /locus_tag="ACFM72_000452"
     CDS             complement(9582..9797)
                     /locus_tag="ACFM72_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HFC6257078.1"
                     /translation="MKEYKVVIYQESQLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(9872..11215)
                     /gene="argG"
                     /locus_tag="ACFM72_000453"
     CDS             complement(9872..11215)
                     /gene="argG"
                     /locus_tag="ACFM72_000453"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HFC6257079.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMDVAFWDENVEIKPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKQ"
     gene            11340..12140
                     /locus_tag="ACFM72_000454"
     CDS             11340..12140
                     /locus_tag="ACFM72_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HFC6257080.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAGFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYAGRFNQTQRGSRSVYVFEQPESRITPIMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12180..13166
                     /locus_tag="ACFM72_000455"
     CDS             12180..13166
                     /locus_tag="ACFM72_000455"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HFC6257081.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADSSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            13824..14086
                     /locus_tag="ACFM72_000456"
                     /pseudo
     CDS             13824..14086
                     /locus_tag="ACFM72_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14124..14498)
                     /locus_tag="ACFM72_000457"
                     /pseudo
     CDS             complement(14124..14498)
                     /locus_tag="ACFM72_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(14495..14623)
                     /locus_tag="ACFM72_000458"
     CDS             complement(14495..14623)
                     /locus_tag="ACFM72_000458"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257082.1"
                     /translation="MPQTWGEAIQFRIKKQIENELAPPNWSTQFPNGSIYDPKVTK"
     gene            complement(14671..15027)
                     /locus_tag="ACFM72_000459"
     CDS             complement(14671..15027)
                     /locus_tag="ACFM72_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HFC6257083.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(15032..15136)
                     /locus_tag="ACFM72_000460"
     CDS             complement(15032..15136)
                     /locus_tag="ACFM72_000460"
                     /inference="COORDINATES: protein motif:HMM:NF018014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257084.1"
                     /translation="MDDIRGIIQGAVNPLIYKVSKQKIIYNNKLILRT"
     gene            complement(15170..15514)
                     /locus_tag="ACFM72_000461"
     CDS             complement(15170..15514)
                     /locus_tag="ACFM72_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257085.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGVFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(15673..16074)
                     /locus_tag="ACFM72_000462"
     CDS             complement(15673..16074)
                     /locus_tag="ACFM72_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257086.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            complement(16078..16530)
                     /locus_tag="ACFM72_000463"
     CDS             complement(16078..16530)
                     /locus_tag="ACFM72_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257087.1"
                     /translation="MQTKALGTVDEIGDTVQQVGKQASGQKTSGGNPAIDSDPYSPSS
                     VAARIEAGKARSDLQIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQ
                     TRPNGTITGNLPDGRAVNARNDSSGGEPTLEITISNNRKIKIRYGNTR"
     gene            complement(16525..16818)
                     /locus_tag="ACFM72_000464"
                     /pseudo
     CDS             complement(16525..16818)
                     /locus_tag="ACFM72_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(16888..17205)
                     /locus_tag="ACFM72_000465"
     CDS             complement(16888..17205)
                     /locus_tag="ACFM72_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257088.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(17202..17462)
                     /locus_tag="ACFM72_000466"
     CDS             complement(17202..17462)
                     /locus_tag="ACFM72_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC6257089.1"
                     /translation="MRPTTRDELRQALQEQGFRRTGSDEAQYETWKGPDGVKIDIRPN
                     GEVIRTQRVPRTDGVQGKYPQRQNYEGNPLPNNRHHSGYFIK"
     gene            complement(17460..17804)
                     /locus_tag="ACFM72_000467"
                     /pseudo
     CDS             complement(17460..17804)
                     /locus_tag="ACFM72_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(18230..18574)
                     /locus_tag="ACFM72_000468"
     CDS             complement(18230..18574)
                     /locus_tag="ACFM72_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257090.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(18612..18935)
                     /locus_tag="ACFM72_000469"
     CDS             complement(18612..18935)
                     /locus_tag="ACFM72_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257091.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYETFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(18938..19222)
                     /locus_tag="ACFM72_000470"
     CDS             complement(18938..19222)
                     /locus_tag="ACFM72_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257092.1"
                     /translation="MAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQGKT
                     PARIPPMSDTKNGWLAKDGWVKRVQNVNKIEIHYIENSRTGEKTDFKFKD"
     gene            complement(19205..19531)
                     /locus_tag="ACFM72_000471"
                     /pseudo
     CDS             complement(19205..19531)
                     /locus_tag="ACFM72_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257312.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(19637..20008)
                     /locus_tag="ACFM72_000472"
     CDS             complement(19637..20008)
                     /locus_tag="ACFM72_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC6257093.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(20005..20360)
                     /locus_tag="ACFM72_000473"
                     /pseudo
     CDS             complement(20005..20360)
                     /locus_tag="ACFM72_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(20388..20594)
                     /locus_tag="ACFM72_000474"
     CDS             complement(20388..20594)
                     /locus_tag="ACFM72_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257094.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(20604..>21155)
                     /gene="mafB"
                     /locus_tag="ACFM72_000475"
     CDS             complement(20604..>21155)
                     /gene="mafB"
                     /locus_tag="ACFM72_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC6257095.1"
                     /translation="SAKQWADAHPNITATAQTALAVAEAATTVWGGKKVELNPTKWDW
                     VKNTGYKKPAARHMQTVDGEMAGGNRPPKSITSNSKADASTQPSLQAQLIGEQISSGH
                     AYNKHVIRQQEFTDLNINSPADFARHIENIVSHPTNMKELPRGRTAYWDDKTGTIVIR
                     DKNSDDGGTAFRPTSGKKYYDDL"
BASE COUNT         5005 a         4958 c         5325 g         5867 t
ORIGIN      
        1 gtacggcgtt gccttgcctt agctcaaaga gaatcggttc cgtactattt gtactgtctg
       61 cggcttcgtc gccttatcct gatttttgtt aattcactat atcgattctg ttcccttgca
      121 ggcggacggc ggcggcggac ggtggaaaag caggttttca aatgtccggt ttggcggcgc
      181 gccgtctgaa aaccgcttat tttcctttgc tgtttccggc ggagtctttt ttgtccgaac
      241 cggagaagcg gtcgaaacgt atggtgtatg tcagctcgcc gcccgacgaa cggctgccga
      301 tacgggcaac cgcctgtatg gcgcgggtca gccggtaaat cagtttgacg gactgttccg
      361 cgctggagat gctgtattcg tagccgatgt agagtttgcc ggtcagttgt ttgccgacgg
      421 tcagcacctg ttcggcgggg ttgagttcgc cggtttgcgc gttgcggctg cgcttgctgg
      481 taaagcccaa atcatccacc agcccgatgc ggtcgttgat ttgcccggca agcagcgcgc
      541 cggcggctgc ggacagggcg gcattgtcgc cgctgctgcc gctgccggcg cggttgagga
      601 tgagccagga gagcttgtct ttttcactca tcggttcgtt tgccgtcagc gtaatgcgcg
      661 gactgttgag gctgcccaat atttccacgc ccgcaccgac gggggaaagg cggcgttcgg
      721 cgcggatgtt gaggttgggg tcgttgagcg ggccgacaaa ggagaccgtg cctttggtaa
      781 tgtccaaatc ctgcccgtat gccttataac gccctttgat gacgcggacc gtgcccacgc
      841 cccgcacgct tccgcccgat tgggcggtca gggtcagttt gccgcctatg gtaacgtccg
      901 cgccgtagcc ggcgaagcgg atgccgtcat tgaggtctaa agtcaggttc atattgacgg
      961 ggagcggtgc cgccgcctct tttttgactt cgcctaatac gacgacatcg tcgccgacgg
     1021 acggcatcga ggatttttgc gaaccgaaca gcccctgatc cgttttaatc atcccggtaa
     1081 cggatatgcc tttttgcggc gaatagcgca ggcgggtgtt gccggaaacc gtcaggcggc
     1141 ggttggggcg ggacaggatg cggtatttgt cgaacaccgc gccgatatcg acatcgggtc
     1201 cgctgttttc cataccgacc gtaccggaga gttccgccgt cccttcgtgc cggaatttca
     1261 ggctgtcgat tacccatttc ctgcccgcga tatgcgaacg cagcgagccg ttgtccaaga
     1321 tgatgccttg ggtttggttg cggtaataga gtttgtcgcc gttgatgctg ccgcccaagt
     1381 gcggatcggc gatgctgccg ccgagggtta cggcggcatt caggctgcct ttgacggttt
     1441 gtccgaccgg taggaagttg cggaatactt cggcatcggc aacggtcagg ttgagcctgc
     1501 cgcccaaagg cgcggtatcg aaagagcggc tttgcccgac ggtgatgttg ccgttgattt
     1561 tcccgtagtt gctgctgccg ttgacggcgg cattgacgga cggagagcct acccgtccgc
     1621 cgatttgcgc ggcggcattc aggctgccgg taatgttttg cgcggcggcg ggcagaaagg
     1681 gcttcaatgc gcccaagtcg ggaagggagg cggtaatcct gccgccgagc ggtgcatttg
     1741 ccatattgcc gccgaaggcg ttggcgatgc ccaaatcggc gttaatccgc ccgaaacgcg
     1801 cgccgccgtc aagcaggatt ccgatacggt cgttttgaaa gcgcgttttc agggaaaatg
     1861 cgttcaaacc caaagcctgc ccgccgggca atacggcatc gccgctttgc cggctgatat
     1921 tgaggtagcc gcgcgcgttg cgcccgtagg cgacatccca gtcgccgttt aaaaccagat
     1981 tgtgttcgaa gggcggtttg aagaaattgt gcaactcggc gatatgcaga ccgtgtgcgc
     2041 cgccttttgc cgatatgccg gtttttttat cccaagaaaa gtgttgcagg ttgaggctgc
     2101 cgcccattgc ctgccaattt gccgcacttg ccgccacgcg ttccgcaccg gcttcgagcg
     2161 tcatacggtt ttgcagcttg aggttgaatg cgccgccgat gtcgagaatg ccgatgctgc
     2221 ccttccatag ggtaagttcc ctgttgatgc cgcctgaagc gtccaaatcg aatttgaacg
     2281 gtttgccatc cagcgtcatg gcggcgtgtg tgcggatgcg gtgctgcacg cccgtgccgt
     2341 ccagcatcag gtcggcggta tcgacaaccg ccgctccgcc cgacagcgaa aggcggctgc
     2401 ctttgatgtc ggcgcgtatc gggcggcttg tgtcgggcga acctttgagc gtgaaatcga
     2461 gcgaacggat gtctgccgcc ttgccgatgt gcaggttgcg cgccgcgccg gaaagatcgg
     2521 tttcaaaggt tcggatgccg ccgtccaaat caccggaaag gtgtccgcgt acatttaaag
     2581 accccgcgag tccgaaaccg aaacgggata aatcgggtgc ggtgatattg aggttaagcc
     2641 ggtcgccttt tttgccgaag ccgccgtctg ttttgatgat gttccgcccc agccgcaaat
     2701 cgacggcggc acgcggaagg tggcgggact cgtaaacaat gtcggcactg ccggcaatcg
     2761 gtacgccgtt gaacgtgccg ggtaaaaacc gcattttgcc tgtgaatttc tcttttgcca
     2821 gttcgccggc aaggtttatt gagccgttga tattgcctgc cggaagttgc ggatcgatgc
     2881 gcgaagggtc gaatgcgcgg gaacggatgt ccagcttgag caggcggtct ttaaacagct
     2941 cgagatagcc ttgcgcggtc aggctgcctt gcccggcggc gatgttgacg gtgtcgagca
     3001 ccagtttccg ctgtccgttt gcggggtcgc ttgcaatggc gaggctgccg tccgtgcgcg
     3061 ccgtgccgat gccgagttgc caagagattt tgggcgaggc ggtcgtgccg ccgatgccga
     3121 tgctgccgtc caacctgcct ttgaacgcgg tttgcagcac gtcttccgcg ccgacggagt
     3181 tgatgcctat atttaaatcg aggatgtctt tttcggtgtc gattttgccc gacagcctga
     3241 tgccgccccg tccgagcagg gcggcggacg tattgccgat atgcaccgtg ccgtcctgcc
     3301 ggatgacaaa gctgcccaaa acctgacgga cggggatgcc gttgcggtcg gcaaagccgg
     3361 ctttggtgtt ttccaaatcg agcgaacctt ccagcgcgat gccgtctgaa aacgacggga
     3421 tggcggtcag gtcgaaattc agtccggcat cgggcaggga aggcacgaag gcggccggat
     3481 tgatgttgaa ccctttgacc agtacttctt ccaatgtttt atccaatgat tcggcaaacg
     3541 ggtggatgac ggattttccc gagaggcgga tattgccgcc gtcgatcgcc agttcggcgc
     3601 gcacatcctt caggctgccg ctcagccgcg ccgtactgtg tatggttttg ccttcgagtc
     3661 cgcctttggt gtaaatggcg gtatcgaggg caaacggttt tttcaagccg accgaggctg
     3721 accccgacga actgctccac ggcgtgtcgg cggccttcag gtcgaggcgg tgtcctttgc
     3781 ggtcgtaacg gtatgaagca tccagccgtt cgagatagac ggtttgtttg tcaaaggctt
     3841 tgcccatgct gattttgccc gtctcgaagc ggtcgagata gacggcggca ggcaggtcta
     3901 tgctgtcggg aaggctgagc ggcgggcgtt cttctttagg cggagtcggt ttggtaacga
     3961 tggcgatgtc gccggcggaa atttcggtaa tgtgcaggct gcggcgcatc agttcggacg
     4021 gtttccacgc gaagcggaag cggctgattt taaggtctgc cccctcggtt tctatcgacc
     4081 agttgtcgcc gtcgaagccg tcgagcagcg tgcctttgag gttttgggag gaaatgttta
     4141 cgccgaacca agacgggatt tggtacagcc cgaagcgcaa accggattcc gtaccggcga
     4201 gccagccgag gaaacatact gccaaaatca ggacagacag cagtgccgcc gacagcttca
     4261 gcagcgggcg gcgttttttt gccggcgggg cagggcggtg ttcagacggc attttgcgcg
     4321 tgccgttttc ggtcggatcg gtatctgtcg gtgcggtatc ggtcataatg tctgtttcaa
     4381 aatggtttgc tgcaatgccg tctgaagcgg ccatatcggt ttagaagcgc gttcccaggc
     4441 tgatgtgcca gcggattttc ttatcgctgt gcccgtaggc gatgtcgaag gaaaacggcg
     4501 cgagcgggct gaaccagcgt acgcccagtc ccgaaccgtg tttcagcttc atacgtttga
     4561 aattggcggc ggcatcgccc atatcgtgga acaccgcgcc ggaaagggtg cgcgtaaacg
     4621 gcagttggta ttccaggctg cccgtcaaga gggcgcgttc gggcaggacc gatccgttcg
     4681 ggccggcaag tccgatgctg tcgagttcgt aaccgcgcac ggaagacgcg ccaccgctgc
     4741 ggaacatcag ccccgagggg acatcggcat tatcgcgggc aacggtgtaa cccgcttgtc
     4801 cgcgtatgat gaacgtgccg agttttttgt tttcgggcgt gaagaaataa cctgcgcggg
     4861 cagaggtgcg gatcagcgcg gtggaggaca ggaatgtgcc caaagtcgta ccgattttgc
     4921 cgtcgaggta atggccgttt tcgggatgca gcacgttgtt gagcagctgg cgtttccaag
     4981 aggcggtcag catcgtggcg tggctgttgc ccaaatcgac agccgagccg gggattttcc
     5041 ggccttctgc gagaaactct gcccccagcc tggcatcgat gcccgcgcgg tcgcgcacat
     5101 accagatgcc gccggagaag gcgcgttttt cgaggttttg ggtggtcgaa cggttgtagg
     5161 aaacgttgct tgtccagtag ttgccccgat agttgcgcgg ctggctgatg ccggcggcaa
     5221 gcgtggtttc gtatttgtcc atatcccaga cgaccgagcc gatatagcct ttgttgaaga
     5281 ggttgtaata gtcgtaggcg attttgccgc ccaaaccgta ttccgaatcg aggcggatgc
     5341 cggtttcgag cttgtggcgt ttgacctcgg ttacgctgac tttgacgggg acgcggtcgc
     5401 cttggagacg gtcgaagtcg gcttgtacgg acgcgccgga ataatgcccg ttttgttcga
     5461 gtgcctgttg gaagtcgagc agcaggtcga ggtcgtaggg cgtgcccggt tggaagcgcg
     5521 ccaggccgga gacgatttgt tcggggtaac gctgtgtgcc ggtgatttca aagtcgccga
     5581 aggcgatggg gcggccgctg tccacgacga cgttcaaatc gacggtggcg gtatcggggt
     5641 tgacggccgc ccgggtgttg ccgagcttgg caagcgggta gcctttgcgc gttaccgcgc
     5701 cgaggacgga agttttgctg ttttcccaac tgtcctgatc gaaatcactg cctaccggct
     5761 gctgccagtt ttccagcgcg ttgcggtagt attcggcgag gttgccgtct gaaaggatgt
     5821 cgccgaggat ggcgacaccg acgttggcga ttttggtgcg cgggcccggt gtgatgtgta
     5881 ccgtataagc tccgtctttt tccgtcaggc tgactttgct gctgaaatag cctttgctgc
     5941 ggagcatggt tttaacgttg tccggtgctt cttcggcgag gaagcccgtc tgttccttgt
     6001 ccaatacttc ttcctgctgc tgcgtgatga gcggcaggtg ttcttcgacc atatctttaa
     6061 tttcactatc ctgcgtgtcg atgcggacgg ggaatttggg ttttaattta actgattcgg
     6121 tgtcggggct tttgtttttg aacaatgcga aacccgccgc cttgttttcg gaaaggtcgg
     6181 cggcaggcgc gtatgcgtgc ggaaagaaaa ataaagccgg caggagcagg gcggtcggtt
     6241 tgatcatcat ggtacgggtg tcgtgcatcg gtgtgacaga tttcgattct aacactgttc
     6301 ggacagggtt tcgaacggct gtttttgtgt tgttcggacg gggcgggaca cttcagacgg
     6361 catactgccg ccggtatttc ggaggttgcg gcccgccgga aatgtatctg cttgttttaa
     6421 ggtattttgt ttccaatccg catatggaaa acaggctgcg tttcggaata gtgccggaaa
     6481 ataggcagga ttaaataaat ttattttcgt tcaataaatt aaaccgttgc gccgaatgat
     6541 aaagcaaagc ctgtccggca ctgcataggg caaatcaacg caaccttaaa acacagccga
     6601 aaaataaaaa aaaacacaga gaatgagttt tcttttaaaa tacaacattt tttaacatat
     6661 cacaacataa ggaagaatta tggcgttcgg caaatcctta tttcatgcga tcggccgcgt
     6721 cagcctggtc aggcagattg ccgccggttt ggcgttgggc atcgtaatcg gttcggtttc
     6781 cccgcaactg ggcttggcgg caggcttgtt cggcagcctg tttgtcggcg cgctcaaagc
     6841 ggtcgcgccg gttttggtat ttattttggt ggcggccaca atcgcgcagc accaaaaagg
     6901 caacaaggcg catatcaggc cgattatcat cctttacctc attggtacgt tttccgcagc
     6961 cctgaccgcc gtcatcgccg gtatggtttt cccgacgcac attgttttgg cgggcgcggg
     7021 cgatgtgtcc gccgcgccgc cttccggcat tgtggaagtg ttgaaatcgc tgctgatgaa
     7081 cctggtcgcc aacccgatta acgcgattgc caatgccaac tatatcggca ttttggcttg
     7141 ggctttggtt ttgggcgcgg cgttgcggaa tcacggttcg gacgttacgc ggcaggtcgt
     7201 tgccgatttg gcggaagcgg tttccaccgt cgtgaaatgg attatccgtt ttgccccttt
     7261 gggcattttc gggctggtgt cgtccacaat cgcggagacg ggtttcggcg cgctggcggg
     7321 gtacgcgaag ctgcttgcag tgctgttggg ctgtatggcg tttatcgcgc tggcggtcaa
     7381 tcccgccatc gtgtggtgga aaatccgccg caacccttat ccgctggtgt tcacctgcct
     7441 gcgcgaaagc ggcgtgtatg ccttctttac ccgttcttcc gccgccaata tccccgtgaa
     7501 tatggctttg gcgaaaaaac tggggctgca cgaagacact tattcgattt ccatcccgtt
     7561 gggggcgacc gtcaatatgg gcggcgcggc gattacgatt accgttttgg ctatggcggc
     7621 ggcgcacacc caaggcatac aggttgattt tgccaccgcg ctgctgttga gcctggtggc
     7681 gacggtcagc gcgtgcggcg cgtccggcgt ggcgggcggt tcgctgctgc tgattccgct
     7741 ggcgtgcagc ctgttcggca tcagcaacga tgtcgccatg caggtggttg ccgtcggctt
     7801 tatcatcggc gtgattcagg attcggcgga aacggcgttg aattcttcaa ccgatgtttt
     7861 gtttaccgct gccgccgatt tgggccgaca gagaaaccgg gcggaataaa ccaagctatg
     7921 ccgtctgaag cccgtttggc gttcagacgg catattttta caattttatg ggcatatggc
     7981 ggaaacaata ccggctgcct tgaatatgaa ggggatgatg atgtttgaac gcagtgtgat
     8041 tgcaatggct tgtatttttg ccctttcagc ctgtgggggc ggcggtggcg gatcgcccga
     8101 tgttaaatcg gcggacacgc tgtcaaaacc ggccgctcct gttgttgctg aaaaagagac
     8161 agaggtaaaa gaagatgcgc cacaggcagg ttctcaagga cagggcgcgc catccacaca
     8221 aggcagccaa gatatggcgg cagtttcggc agaaaataca ggcaatggcg gtgcggcaac
     8281 aacggacaaa cccaaaaatg aagacgaggg accgcaaaat gatatgccgc aaaattccgc
     8341 cgaatccgca aatcaaacag ggaacaacca acccgccgat tcttcagatt ccgcccccgc
     8401 gtcaaaccct gcacctgcga atggcggtag caattttgga agggttgatt tggctaatgg
     8461 cgttttgatt gatgggccgt cgcaaaatat aacgttgacc cactgtaaag gcgattcttg
     8521 taatggtgat aatttattgg atgaagaagc accgtcaaaa tcagaatttg aaaatttaaa
     8581 tgagtctgaa cgaattgaga aatataagaa agatgggaaa agcgataaat ttactaattt
     8641 ggttgcgaca gcagttcaag ctaatggaac taacaaatat gtcatcattt ataaagacaa
     8701 gtccacttca tctgcgcgag ttaggcgttc tgcacggtcg aggaggtcgc ttcctgccga
     8761 gatgccgctg attcccgtca atcaggcgga tacgctgatt gtcgatgggg aagcggtcag
     8821 cctgacgggg cattccggca atatcttcgc gcccgaaggg aattaccggt atctgactta
     8881 cggggcagaa aaattgtccg gcggatcgta tgccctcagt gtgcaaggcg aaccggcaaa
     8941 aggcgaaatg cttgctggca cggccgtgta caacggcgaa gtgctgcatt tccatacgga
     9001 aaacggacgt tcgtacccga ctagaggcag gtttgccgca aaagtcgatt tcggcagcaa
     9061 atctgtggac ggcattatcg acagcggcga tgatttgcat atgggtacgc aaaaattcaa
     9121 agccgccatc gatggaaacg gctttaaggg gacttggacg gaaaatggcg gcggggatgt
     9181 ttccggaagg ttttacggcc cggccggcga ggaagtggcg ggaaaataca gctatcgccc
     9241 gacagatgcg gaaaagggcg gattcggcgt gtttgccggc aaaaaagagc aggattgatg
     9301 ctgatgctgt ctgaagcggg ggcgttcaga cggcattgtg atgtttgggt tgcgggtccg
     9361 gttcaagtcc gcatcagttg ataaacccgt cgtctttcat tttcttttcg gaaaaatact
     9421 ggccgaatac cagcaaggcg gcgaggatga tgacaaacag ccccgccata gtcagtgtga
     9481 ttttgaagaa caattccgct tcgagaaaag aaaaccaaag ttgcacaatc agcagcagca
     9541 cccagccggc aaacagtccg agacaggcat aaacgccaag cttaaacacg gtcccgctcc
     9601 aaaatgacga cgtaggcctc gcgtttgaaa aacaacagca tacggcgcaa atctttttcc
     9661 atcgttacaa cccgccagcc ttcgggggtt tgtttgttga ggaacgcgct gaaattgacg
     9721 gggttgacct ttgccgcgcc gaaaaacagg ctggacaact ggctttcctg ataaatgacg
     9781 actttgtatt ctttcatagg attcctttta acataaggga tcatcttttc agacgacccc
     9841 ttaagttgct aatgatgtaa aacagcaaac cttattgctt attacccaac tgcggcaata
     9901 ccgaaccttc gcccaatgcc aacaaaccgc tttgcgagta aatgcccagt ttggcgcggg
     9961 tgtcggtaat gtcgaggttg cgcatagtca gttgtccgat acggtcgagc ggtgtgaacg
    10021 ctgcgtcttc gactttttcc atactcaggc gttcgggttg gtaggtcagg ttgggcgatt
    10081 cggtgttcag aatcgagtag tcgttgccgc gacgcaattc gagggttact tcgccggtaa
    10141 tggctttggc aacccagcgt tgggcggttt cgcgcaacat caaggcttgg ctgtcgaacc
    10201 agcggccttg gtagagcagg cggccgaggc gcaggccgtt gatgcggtat tgttcgatgg
    10261 tgtcttcgtt gtggataccg gtcaccaaac gctcgtaggc gatgtggaac aacgccattc
    10321 ccggggcttc gtagatgccg cgcgatttgg cttcgatgat gcggttttcg atttggtcgc
    10381 tcatacccag accgtggcgg ccgccgatgc ggttggcttc gaggaagagt tcgacgggat
    10441 cagcgtattc tttgccgttc agtgcaaccg gcacgccttc ttcaaagcgc acgctgactt
    10501 cttcgggttt gatttcgacg ttttcgtccc agaaggcaac gtccataata ggtttgacga
    10561 ttttgatgcc gctgttgagg aattctaaat ctttggcttc gtgggtcgcg ccgagcatat
    10621 tggaatcggt ggagtaggct ttttcaaccg acattttgta gttgaagccg ttggcaatca
    10681 gaaattcgct catttcgtgg cggccgccga gttcgtcgat aaattgctgg tcgagccagg
    10741 gtttgtagat tttcagcgcg ggattggtga gcaaaccgta gcggtagaaa cgctcgatgt
    10801 cgttgccttt gtaggtgctg ccgtcgcccc aaatattcac atcgtcttct ttcatggcgg
    10861 aaacaagcat agtgccggtt acggcgcgac ccagaggcgt ggtgttgaaa taggcgatac
    10921 cgccggtgga aacgtggaac gcgccgcatt ggatggcggc gatgccttca tgtgccaact
    10981 gcgcgcggca gtcgattaag cgggcgtttt ccgcaccgta ttccatcgct tttttgggaa
    11041 tggcgttgta gtcgtcttca tcgggctgac cgaggttggc agtgtaggca taaggcagtg
    11101 cgcctttgag tttcatccac aacagcgcgg cggaggtatc aagtccgccg gagaaggcga
    11161 tgccgacttt ctgaccgacg gggaggtttt gtaaaatagt atggttttgg ttcatgaaaa
    11221 aatcctcgat agcttgaaaa atcaaagcca ttatcttata aataggaaat attgtcagcc
    11281 atcatgccgt ctgaacgggt attccgccgt ttcaggcggt atttaaaacc gaaaacatta
    11341 tgaacgcgtt caacctcatc atcatcggcg acgaaatcct gcacggcagc cgccaagaca
    11401 agcatttcgc ctttttcaaa tccctgctcg aatccaaagg gctgaagctc aatcaggtgc
    11461 aatatctgcc cgacgaaccc gatttgctgg tcaggcaact gcgccgcagc ttttcagacg
    11521 gcataccgac gtttgttacc ggcggcatcg gcgccacgcc cgacgatcat acccgccaag
    11581 cggccgccgc cgctttggag ttgcccgtcg tccgccatcc tgaagccgcc gggtttatcg
    11641 aaggcataac ccagaaacgc ggcgagccgc ttgattcgcc ggaacacgcc caacgcctga
    11701 aaatggcaga tttccccgaa ggcgcggaat tggtgcccaa tccgtttaat aatatcgccg
    11761 gattttccat tcgcgagcat tatttcttcc ctggttttcc tgtgatggcg cacccgatgg
    11821 cggaatgggt tttggatact tattacgccg gccgcttcaa ccaaacccaa cgcggcagcc
    11881 gcagcgtgta tgtgttcgag cagcccgaat cgcgcattac gccgattatg gagcatatcg
    11941 agcaaactta tcccggcgtg cgttcgtaca gcctgcccag cgtcggttgg acgcattcag
    12001 acggcacgca ggtcaaaccg cacattgagt tcggcatcaa agccgaagga gaagccgtca
    12061 accttttgga cgcggcgtgg gcggaagtgt tgcacagctt ggacggattg ggagcagagc
    12121 tgaaaaatcg ggtaaactga aaaccgtttg cccaaatcgg acaatattta aggaaaacca
    12181 tgcaataccg aatcagaaga gaaaacgaag cacccgaagc aaaaaatgcg ggggaaacct
    12241 tatgggagcg cgacatcatg cgcgaagtgc tgctgtccgc ctatcaggac aggcgcaggg
    12301 agcggatgtg gaaaaacatc tggcgcgccg tcagcaccct gattctggtt gccctgattg
    12361 caggcatttt ccgaaaagac gaagccgcat tgcagttggc gggcaacacg ccgcataccg
    12421 cagtcgtcaa tctgtacggc gaaatcggca acggcgtaga agaccaggtc aaaaaactca
    12481 aagacggtat ggaagctgcc tacaaaaacc cgcaggcaaa agccatcgtc atccgcgcca
    12541 acagccccgg cggttcgccc gtcgtgtcca acaccgcttt tgaagaaata cgccgtctga
    12601 aggcgcagca ccccggcatc cccgtttatc tcgtggcgga ggatatgtgc gcgtccggct
    12661 gctactacat cgcggcggcg gcggacaaaa tctatgccga ctcgtccagc atcgtcggca
    12721 gcatcggcgt tatcggcagc agtttcgacg cgaccggcct gatggaaaaa atcggcgtga
    12781 aacgcagggt taaaattgcg ggcagcaaca aaggcatggg cgatccgttt tcgcccgaaa
    12841 cgcccgaaca gtcgaaaatc tgggaagaaa tgctgaccgg catacacggc gagttcatca
    12901 aagccgtcaa aaccggacgc ggcgaccgcc tcaaattccg acaatatccc gacgtgttca
    12961 gcggtcgcgt gtacacaggc gcggatgcgc tgaaagtcgg gctggtggac ggactcggca
    13021 atatttacag cgtggcgcga gacgtggtca aagcccccga tgtggtggat tacactccga
    13081 aggacgattt cggcagaatc ttgggcagac gcttcggcgc agaactcaaa gcaagcgtgc
    13141 gcgaagccct gcaggccgtc cggtagcgtt gtttacagta tttctaaggg aataccaaaa
    13201 taaaaatata cacaaaaaca ctcacctccc cagtatgctg ccactaagtc agccgcgtca
    13261 ctatttaccg tgcacttaaa gccgtaaaag gcaggttgtc cccgggaggt tttgtgcatc
    13321 ctgataccga tcggttgttg ttgctcaaag gacagaaggc cgccgataaa cgagattacc
    13381 tgtttgtcgc tattgacgat ttttatactc tgccattttg ccggacaaaa ccgcagacag
    13441 tgctgccaag tttctgaccg aacatctgtc cgacccctgc ttgtacctga ttgagtacgt
    13501 ttactctgac aatgataggt aatataaaga gccgtccaac atgctttcgg tgcagcttgt
    13561 tatgataatg ggattggttg gaggcttgcc cgatttgctt gtccgcagac caacggtaag
    13621 gcggagcggg ttatccgtac cttgatggag atgtggcatg aggaacagtc gtttgacagt
    13681 ccggaacatc ggcaaaagga gttgtgctgc tttattaatt taggggctgc cctagatcac
    13741 tagggaaatt caaattaagt tagaattatc cctatgagag aaagtcgtct aagccggtaa
    13801 taaacaaaat aaactcattt tgttatcgtg gctatgatgt attggatgcg ggcgaattta
    13861 gccatttccg tatcaatcac agcacacatt ttgccgaacg acaaaaccat attaatggaa
    13921 ctgagaactt ttggaatcaa gcaaaatgtc atttacgcaa gtttaacggc attcccaaag
    13981 cgcattttga gctgtattta aaggagtgcg aatggcgttt taacaacagt gaaataaaag
    14041 ttcttgttcc attttaaaac aattagtaaa atcgagttta tcctagttgt ccagggcagc
    14101 ctcatctctt tatagatagc tgcttaccaa gtatccttaa ttgctaattc aagccaatct
    14161 tcaaaactat taaaaaattc atggttttct atattatcta aattaatgac aataacccta
    14221 gaatttcctg ttacatcatt accatcaaaa taagcttccc attctccatt actagcgaat
    14281 gggataagat ttaaatcagg caggatagaa tttctaaata tataagctac ttctgcccct
    14341 tctgttccat aattctcaaa ctaccagtga aaattatgtg gctgaatata aggtattaaa
    14401 gatgtatcgt tagagatacg aacatacttt tcaggataac aaaacctttc aggaagcata
    14461 ttactaggat ataaattaaa ttcattttga ataatcattt cgttacctta ggatcataaa
    14521 tactaccatt aggaaactgg gtagaccaat ttggtggtgc tagttcattt tcaatttgtt
    14581 ttttaattct aaattgaata gcttctcccc atgtttgcgg catctaatgc tgcttgctct
    14641 gcatcaatat tactaaaaat tggattagtc tcaaaaatga aaaattactg ttttttcatt
    14701 ttttatagca tattcaagta catgaataat atttttcact aagggctctg tagaaaaatc
    14761 tgaattttgt aatttttctt ttacagccaa aatactttcc ttatctatta gccaatcccc
    14821 ctcacttggt ccaaataacc aattatcggt aatttcagaa acaagtctcc ataatccacg
    14881 attttgatat tcaataattt gactttccgt aatttctaca actgtttcag attgaatgtt
    14941 tttataagcc caatcaatca tttcagtata ttcactaatt gaaacattgt cttttaaaca
    15001 gaaaattaac aggttgtgtt cattcatttg tctaagttct taatatgagt ttgttgttgt
    15061 aaataatctt ttgcttgctt accttgtaaa ttaaaggatt aaccgcacct tggatgatgc
    15121 cgcgaatatc atccatacgg ttaccccacc aatttttatt ggtgtatcgt taatcattta
    15181 tttcaaaaaa gttatttatt atcatattat cagggagcag gtcgttaaaa aaaaccccct
    15241 caaattccat taaattagta tttatccagc acataaacga accaaagcgt tctttccctg
    15301 agtgtaaata tttaaaatta aactcaaaat aagttttttt gcttagaaaa tttaatggtt
    15361 tttctatagt gaaaaaaaag cccttactcg ttttcgttcg agatactatt ttaaataaat
    15421 ttttattttc aataaaataa gaatattcat ttactaagtt gttatgataa aaaagtaatt
    15481 ttattaaaat gttttcataa ttttctaggt tcatttctag ctcaatttaa aatgatttca
    15541 ttgttgccgt accaatgcga aatttaccat caacaaaatt tcccttcact gatacaggta
    15601 caccatcaac ttgggtagtt ttattttcag gctgcctgaa agaaagatag gcaacttatt
    15661 actcatctta tgctagccct caataattga atacgttgca ctagaaccaa ttatttctat
    15721 gaatgtttgc tcaaacataa aaatatagta tttaaagaat tctctattca aaggaaaata
    15781 actttctttc aatatccatt ccgcataaca ctcatcaaga agttcaaaaa aagattgacc
    15841 accattttca tgaagcaaag ctctatctgc atcttccgaa attaaatcca taaaagtatc
    15901 tataaaatac gattcatcaa caaccctaaa atgaataaca tcttcaataa aaatttttat
    15961 ggttttatcc gtatttctat aaccaactgc tataacttct actttatcag agtttattgc
    16021 tgcattatca aaatagaaat agccagttgg gaaatctaag ctttttaatt tcataattta
    16081 tcgtgtattt ccatatctga tttttatttt tcggttatta ctaattgtta tttcaagtgt
    16141 tggttctcca ccactactat cattacgagc attaaccgca cgcccatcag gtaaattgcc
    16201 cgttatcgtt ccattaggac gtgtttgtac atttcgaaca ttcagactat taaaatcatt
    16261 tagtgcgtca ttgtaatccc ccactttatc atactgaaca gcgggacctt ttgttttact
    16321 cctttgagta gtattgctca aaatgtcttt gatttgtaaa tcactgcgcg ccttaccggc
    16381 ttctatgcga gctgccacac tactcgggct ataggggtcg ctatcaatcg caggattacc
    16441 accgctggtt ttttgtccgc tagcctgttt cccaacctgc tgtactgtat cgccaatttc
    16501 atctaccgta cctaacgcct tagtctgcat atggcgaaca gcaggttttt tatagccggt
    16561 atttttaacc caatcccatt tggtcgggtt aagttctact tttttacctc tccaaaccgt
    16621 acctgcggcc tctgctacgg caagggcagt ttgggctgtt gctgttatat tcggatgggc
    16681 atcagcccat tgtctggcgg aattgatgcc gtcttttacc gcaaaagcac tgtcctgtaa
    16741 tatgctcgcg gcagcaagtt gtgcttccgg gcttaatttt cctaaattat taataccttg
    16801 tagagtctgc tgcgcagaga tgtagcaact gtatttttac cccgtcgggt aaaaatacag
    16861 ttgctacggc tgctgggaaa gcagttacta ttttcccagt ggctcaaaat taattgtttc
    16921 agcagatatt tttataataa tccctacatc aataataatt tcactataaa attggtattt
    16981 atatagctct atttcgggta taaacaaggg aaacaagcta tcttccttat cctcataatc
    17041 tacgaaatta tttgtatcta atttaaaatt caaaatatta ctgcatttga tatatccgaa
    17101 ataattacct tcaattgtat ctgtaaaaga taatgtaagg gtatttccat tatcggaaaa
    17161 gattatttca taaaggctta cattgtgaaa aatatttttt ttcatttgat aaaatatcca
    17221 gaatgatgac gattatttgg caatggattg ccttcataat tttgtcgttg cggatatttt
    17281 ccctgtacac catcggttcg cggcactctt tgggttctta taacctctcc atttggacga
    17341 atatctattt tcacgccatc aggacctttc catgtttcat attgagcctc atctgaacca
    17401 gtacgtctaa aaccttgttc ttgcaatgct tgacgtaatt catctcgcgt agttggtctg
    17461 atagatttaa caactggctt gtttcctcct gccatctcac cgtccaacgt ctgcataggg
    17521 cgggcagcag gtgttttata gccgttattt ttaacccaat cccatttagt cgggttaagt
    17581 tctacttttt tacctctcca aaccgtacct gcggcctctg ctacggcaag ggcagtttgg
    17641 gcagtagctg taatgttcgg atgggcatca gcccattgtc tggcggaatt gatgccgtct
    17701 tttaccgcaa aagcactgtc ctgtaatagg ctcgcggcag caagttgtgc ttccggactt
    17761 aattttccta aatcattaat accttgtaaa gtttgctgcg cagagatgta ggtcggatat
    17821 ttgtatccga caaaaatatt tgacgcatct atcgtttccg aaatgccgct gttggaaaat
    17881 gtcggattcg agaatccgac ctacggctat ttcgtttaag tcataaatag ccattcatgt
    17941 tccttctgaa tttgcttttg ctatccttag aaccaatcat ataaacatta tcatcattaa
    18001 ttaatgttct aagtttatga agcggtcaaa tctgtcaaac taccagagat gaagcatatc
    18061 ctcctggaag taattctgtt cgtgctgttt ccatatcttc tttgccatca tcagttactt
    18121 ctctgtctaa ataaaatctt acgataagtt tttgtctaat ttcatcaaat tctgccgtaa
    18181 ttaatcttat attgatatga atacacggtt catacctgct attagccagt caggtgtagt
    18241 tggatgggga ttcattttta ataatatctt caagcaagtg aaatgtaaga aaagcgtaga
    18301 tacttgaagg ccggctatct gattggcaaa aagaaatttc ggagataaag aatttccgtt
    18361 tatatttttc ataaattaaa tcaacacctt gttttacata aaaactaact tcctcaggaa
    18421 ggatatttat aacattctct ccttttactt ttatagttaa tggtttgatt tttatgtttt
    18481 catgaatatc tgataggatt atttctaaaa aattattttt atttccagtc attctggcta
    18541 ttttatgtat atttccattg tgttcgatta tcattttatt ttttccaagg atttccttct
    18601 atattgatag tttatctaaa gatttcattt aaaatatcct gactaatttc ttgtttatat
    18661 aattctacaa ttttctgttt ctgtgtattt gtataaaatt tttcgttggt atctgcttga
    18721 tattttaatt gtctcaatat ttccatgatt tcatattctg atttttcatc atattcttca
    18781 atcatgtaat caacaaattg ttttagaata tcaaaggttt cgtaactttc caaaatttta
    18841 atatgtttat cggcaaaatt ggacatatac cattcgtcag tgattggatt agtatttaaa
    18901 tcatctaaaa aaacatttac atcatctaaa aacatgacta atccttaaac ttaaaatctg
    18961 ttttctcacc ggttcttgag ttttcaatgt aatgtatttc aattttgttt acgttttgaa
    19021 cacgcttaac ccaaccgtct tttgctaacc aaccattttt agtatcggac ataggaggta
    19081 ttctcgcagg agttttgccc tgtgggtttg ccttaacttc ttccattgct aattgttcct
    19141 ttaaattatt aggtattgta cgaccggttg atttttcaac agattgtgtc cctattttta
    19201 atgatttgtt tcccccagcc atttccccgt ctacagtctg catagggcgg gcagcaggtt
    19261 ttttatagcc ggtattttta acccaatccc atttagtcgg gttaagttct acttttttac
    19321 cgcgccaaac cgtacctgcg gcctctgcta cggaaagggc agtttgggct gttgcagtta
    19381 tattcggatg ggcatcagcc cattgtctgg cggaattaat gccgtttttt accgcaaaag
    19441 cactgtcctg taataggctc gcggcagcaa gttgtgcttc cggacttaaa tttcctaatt
    19501 cattaatatc ttgtaaagtt tgctgcgcag agatgtaggt cggatatttg tatccgacaa
    19561 aaatatttga cgcgtctatc gtttccgaaa tgccgctgtt ggaaaatgtc ggattcgaga
    19621 atccgaccta cggctgctac caaccatcat tttcagcttc ttttagccaa gtatcaaaat
    19681 tttcaaaagt ctcgtaatat tttgtattat ctaaattaac tactataatt ttaggattac
    19741 ctgatttatc tgaaatatca aaacaggcag cccactcttg gtttctagca aaaggtaata
    19801 ggtttggaat gccagttatt tcaaaataaa tgtcaattac ttctgatata ttgctttctg
    19861 cattttcaaa ccaccaagga aaagaatatt gttcatcgta gttaatggca tgagtggatt
    19921 gagctaattt taaataactt tgcggatatt taaatccttt aggaagcatt gcttcaggat
    19981 acggaacaaa actattttgt tttatcattt cctaagtacc tttacatcat aaatacttcc
    20041 gttaggaaat cttttgctcc acccttctgg aactcctttt tgtgtttctt gctttctaat
    20101 tcgtagctgg atagcttctc cccaagtttg aggctcaata ccatcatgct taaacctgat
    20161 tctctctttt gatgataatc ggtcattaaa attatgaaca ttcgcttcca cttttacccc
    20221 tgcttcatgt gctgccataa tacgcgtgtt atccatacta gtaggtgctc catcaggcat
    20281 attaacaaca tcaaccctgt cgccaaccca tgattttttt cgttcattgc agctacaaga
    20341 gaatcatagt tgtaatttgc actaggctct gacaaaaatt tgggttgtta agttgtcatt
    20401 tttttataaa ttccagcaaa ctgttgttgt aaattatcta cttcatgttt tctaacacca
    20461 gatacatttt caaattctct tgaatctaca catacgcccg catatatctc attcaagata
    20521 gctcgtaaaa caaaaacttc atcttgagtt agtgaaatag ttgagttttg attatttatg
    20581 gatagtatat tcatggcttt ttcctataaa tcatcataat attttttacc tgatgttggt
    20641 ctaaatgctg tacctccatc gtcagaattt ttatctcgga taactattgt ccctgtttta
    20701 tcatcccaat acgcagttct accgcgaggt aactctttca tatttgttgg atggctaaca
    20761 atattttcaa tatgccgagc aaaatctgct ggtgaattga tatttaaatc cgtaaattct
    20821 tgttgtctta tgacatgctt gttataagca tgcccactac taatttgttc tccaattagt
    20881 tgcgcttgta aagacggttg tgtggaagca tctgctttgc tgttggacgt tatagattta
    20941 ggcggtctat tcccccctgc catctcccca tctacagtct gcatatggcg ggcagcaggt
    21001 tttttatagc cggtattttt aacccaatcc catttggtcg ggttaagttc tactttttta
    21061 ccgccccaaa ccgtagttgc ggcctctgct acggcaaggg cagtttgggc tgttgcagtt
    21121 atattcggat gggcatcagc ccattgtttg gcaga
//
LOCUS       DAXHRP010000016        21021 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.016, whole genome shotgun sequence.
ACCESSION   DAXHRP010000016 DAXHRP010000000
VERSION     DAXHRP010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.016"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(25..716)
                     /locus_tag="ACFM72_000476"
                     /pseudo
     CDS             complement(25..716)
                     /locus_tag="ACFM72_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(1022..1792)
                     /locus_tag="ACFM72_000477"
     CDS             complement(1022..1792)
                     /locus_tag="ACFM72_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257096.1"
                     /translation="MASIALYRLSFPVAAGGSGSRCTLCTKAHRESMLAIYSINILIY
                     NEKSFFRVTLYFVKNFVSFSKPRKSNEMMQKHKCLIDFILTVASQIAYADLPLSLEEL
                     LTDKGKFKLESSISYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQV
                     FDSQNVKAIQLSQAEMKETQGEFVPIIAAAAFGGALGAWGYHGANLYNHGKLGTAQGA
                     ATATGIGAATGVAAKQGWLLLPEADWLGIWHGDRVFMH"
     gene            complement(1823..1981)
                     /locus_tag="ACFM72_000478"
     CDS             complement(1823..1981)
                     /locus_tag="ACFM72_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257097.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(1978..2820)
                     /locus_tag="ACFM72_000479"
     CDS             complement(1978..2820)
                     /locus_tag="ACFM72_000479"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC6257098.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPILVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            2886..3029
                     /locus_tag="ACFM72_000480"
     CDS             2886..3029
                     /locus_tag="ACFM72_000480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257099.1"
                     /translation="MPSEKYGIRAVKLCGGKCAIIRAVLPLLRSCSANIRAAWTTYNR
                     IPA"
     gene            3059..3979
                     /gene="pyrB"
                     /locus_tag="ACFM72_000481"
     CDS             3059..3979
                     /gene="pyrB"
                     /locus_tag="ACFM72_000481"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HFC6257100.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            3989..4447
                     /gene="pyrI"
                     /locus_tag="ACFM72_000482"
     CDS             3989..4447
                     /gene="pyrI"
                     /locus_tag="ACFM72_000482"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HFC6257101.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4512..5177
                     /locus_tag="ACFM72_000483"
     CDS             4512..5177
                     /locus_tag="ACFM72_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257102.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQILAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5240..6457)
                     /locus_tag="ACFM72_000484"
     CDS             complement(5240..6457)
                     /locus_tag="ACFM72_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC6257103.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            6641..7144
                     /gene="def"
                     /locus_tag="ACFM72_000485"
     CDS             6641..7144
                     /gene="def"
                     /locus_tag="ACFM72_000485"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HFC6257104.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLIADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            7231..8157
                     /gene="fmt"
                     /locus_tag="ACFM72_000486"
     CDS             7231..8157
                     /gene="fmt"
                     /locus_tag="ACFM72_000486"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HFC6257105.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8236..9495
                     /gene="rsmB"
                     /locus_tag="ACFM72_000487"
     CDS             8236..9495
                     /gene="rsmB"
                     /locus_tag="ACFM72_000487"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HFC6257106.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9461..10060
                     /locus_tag="ACFM72_000488"
     CDS             9461..10060
                     /locus_tag="ACFM72_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HFC6257107.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10060..12180
                     /locus_tag="ACFM72_000489"
     CDS             10060..12180
                     /locus_tag="ACFM72_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC6257108.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLFAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQQAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFAHRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKESDERNRRREEAARHYLECVLEGLTTGVVVFDEQGRLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12173..13450
                     /locus_tag="ACFM72_000490"
     CDS             12173..13450
                     /locus_tag="ACFM72_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HFC6257109.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVGAAVKCASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13541..14734
                     /gene="dprA"
                     /locus_tag="ACFM72_000491"
     CDS             13541..14734
                     /gene="dprA"
                     /locus_tag="ACFM72_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HFC6257110.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRASARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTSDTGSRAVQTAYAPPPSPEGKMPS
                     EGAACGTDPGGILDKMGFDPVHPDVLAEQLAMPAADLYAALLELELDGSVAAMPGGRY
                     QRIRT"
     gene            14760..15221
                     /locus_tag="ACFM72_000492"
     CDS             14760..15221
                     /locus_tag="ACFM72_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HFC6257111.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15293..17599
                     /gene="topA"
                     /locus_tag="ACFM72_000493"
     CDS             15293..17599
                     /gene="topA"
                     /locus_tag="ACFM72_000493"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HFC6257112.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNSKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLSNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAESCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17672..18367)
                     /locus_tag="ACFM72_000494"
     CDS             complement(17672..18367)
                     /locus_tag="ACFM72_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257113.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFK"
     gene            complement(18387..18938)
                     /locus_tag="ACFM72_000495"
     CDS             complement(18387..18938)
                     /locus_tag="ACFM72_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257114.1"
                     /translation="MEFLSLYPWWSFFIILTIILSYIGFCAHLHIQNRAVFFYSYRDV
                     TIIFLTPVILIALSYLIKNKEILSVCILCITLIAFSWAWIITYRSNTKRFFLSLLIVC
                     GKLLLSTIVWAILAISLGLAVITGNSKRKKYERRDRHAERNEKAFIGALLVGFELSRN
                     LLNLCCLHKDFSTPSKNIEVNRS"
     gene            19056..19433
                     /locus_tag="ACFM72_000496"
     CDS             19056..19433
                     /locus_tag="ACFM72_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein-bridging factor 1 family protein"
                     /protein_id="HFC6257115.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19522..20091
                     /gene="rsmD"
                     /locus_tag="ACFM72_000497"
     CDS             19522..20091
                     /gene="rsmD"
                     /locus_tag="ACFM72_000497"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HFC6257116.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20214..20465
                     /locus_tag="ACFM72_000498"
     CDS             20214..20465
                     /locus_tag="ACFM72_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HFC6257117.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            20562..20645
                     /locus_tag="ACFM72_000499"
     tRNA            20562..20645
                     /locus_tag="ACFM72_000499"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20596..20598,aa:Tyr,seq:gta)
     gene            20676..20749
                     /locus_tag="ACFM72_000500"
     tRNA            20676..20749
                     /locus_tag="ACFM72_000500"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20708..20710,aa:Gly,seq:tcc)
     gene            20759..20833
                     /locus_tag="ACFM72_000501"
     tRNA            20759..20833
                     /locus_tag="ACFM72_000501"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20791..20793,aa:Thr,seq:ggt)
     gene            20882..>21021
                     /locus_tag="ACFM72_000502"
     CDS             20882..>21021
                     /locus_tag="ACFM72_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC6257118.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KA"
BASE COUNT         5281 a         5342 c         5717 g         4681 t
ORIGIN      
        1 aataaatggg caaaaatcgg tttattatcg tttttgccgc atttggattt gttctaccgt
       61 aaaacgtgtt tgacgaacgg gattcttatt aaaaaacatc tgatttctaa caaaatcagt
      121 attttttggc acgatggcta aaatttttcc ttccatttcg ccatcacgtg ttttccatgc
      181 gctcaagaat tgtgatttgc tcattgagac gtgccccagc gatggatcag ccagcaaaac
      241 agtttctccg ttaataccgt tcaataccga aaaatggttg tttttacggt attttaaata
      301 cacaattaca ggaattttta gttgtaccaa ctgttcaaat ggcaaagcat aaccttgtgc
      361 ttcaaaaccc agttcgggca ttatgcgttg catatcgtca aaagaagcac gcatttgggt
      421 tttatccatt ttgtctaaga tttccgcttc agaataatgt ctgccataaa aattattcag
      481 taacgtggca atcgaagccg cgccgcaaga aaaatccaaa tcttgtttta ctatgccgga
      541 atctcgccgt gctttccaac tccgtacatg gatgttttgg taagaagcgg ggggtcaaca
      601 aacataggcc aagcaaaaac tatatttggg gcgaaaccaa tcaaagccgc ataatttatc
      661 aatttataaa gattttttat cataatatgt atacgcggaa taaacgcatg aaacataaaa
      721 aaataaaatc atatgcaatt ttattgcatg aataaatatg aataaaatag ataatgatgg
      781 gagtaaatac gccatgtatt ttggaagttt aaatttatta ataataaaat aatttatcgt
      841 agcgcaaata aatcccaaaa ttggaacgat tagaaaaaaa attaatacac ccatcatcat
      901 gcaaactcta tattaataaa tagctaacta attctattgt ggaaattagt tagctaacta
      961 aaagttatta atgattattt tcgagaattg actgcattgt tggcagcatt ggcaccaaaa
     1021 cctagtgcat gaatacccgg tctccatgcc aaattcccag ccaatccgcc tccggcagca
     1081 gcagccagcc ctgttttgcc gctactcctg ttgccgcacc gattcctgtc gcagtagccg
     1141 cgccttgcgc agttcctaat ttaccatgat tatacaaatt agcaccatga tacccccatg
     1201 cacctaatgc accgccaaaa gcagcggctg caataatggg aacaaattca ccttgtgttt
     1261 ctttcatttc agcctgtgat aattgaattg ctttcacatt ttggctgtca aaaacttggc
     1321 tgtctaaatt ttgcgccatt acaggtgtaa tcatcatagc cattacagtt gcaattttcg
     1381 ttgcgctggt ttgcacataa ataggattag caaattcgct ttgattgcgt tcagtgttga
     1441 tgtagctaat actgctttct agtttgaatt tacccttgtc agtcaataat tcttccaaac
     1501 ttaaaggtaa gtcagcataa gcaatttggc tggcaacagt caaaataaaa tctattagac
     1561 atttgtgttt ttgcatcatt tcgtttgatt ttctaggttt tgagaatgat acaaagtttt
     1621 ttacaaagta aagagtcact ctgaaaaaac ttttttcatt ataaatcaaa atattgatag
     1681 aataaatagc gagcatcgat tcacggtgcg ctttagtgca aagcgtacaa cgcgagcctg
     1741 aaccaccagc cgcaacagga aaagaaagcc gatagagtgc aatgcttgcc aacgtgcaag
     1801 cgagcttgca agaacgcttg gctcaacgag agcaggcaag acagaaagca gaaagcagga
     1861 taggagcggt aacgcaaagg tctcgggctt tgatttcgcc gtaaaccctg ctgccgcctt
     1921 gtccggaaag ggtgcaggcg gcgagtgccg acagggtgca gatggggagg ggggttttca
     1981 tttggggtcg caacggaagt ggtatgcgca gatttcaaaa ccgtttttga aatacaggcg
     2041 gtgcgcgtcg gcacggtcgt ggttgacgtg gacgttgagg tggattttgg ttacccctgt
     2101 ttccgcgccg attttgcgga cttcttccaa aaggcgcgag gcgtagcctt tgcggcggct
     2161 ttgcggcagg gtaacgatgt catcgatgtg gatgtggcgg ccgctggcga gggtgcaggc
     2221 ttcgcggaag ccgcagacgg cgacggcatt gtgtttgcct tcttcaaaaa tacccagcag
     2281 gcggtagcct tgggggcgtt ggactttgtt gatctgttcg gtaaagcggt tgatgtcggt
     2341 cagggcggaa cgcaaaacgc tcaaggctgc aaaggcggtg gcggtgtcgt ccgcgccgat
     2401 ttcgcgcaaa acgtaggatg cgcccgaggc ggtctgttcc tgtgctttct cggcggcgtg
     2461 tttttcttcg attgcctgtg ccagcatgac gtgttcgtcg gcagggttgt tttgtccgcc
     2521 ctgttcgcgt tcttcgagca gggctttgca gtcgatgacg cgcaggtcgt tgtcggcggc
     2581 aaagtccatc aggaagcgga acatttgggg attgtcggtt tccagttttt tatcgacggc
     2641 gacgcagcgg atgttgtcca ccagtatggg gcgcacccat ttcgaatagg aaagcctgtg
     2701 gtctttggtg aacgaggaca gaatgccgca caggcgttcc gcccagtcgc tgggacggaa
     2761 aatcttgccg gaactcgttg tgccgtggat gacgacttcg taggggttgc agactaacat
     2821 ggcggcttcc tgaaaagaaa tgtctggctc gattatacct tatgcttatg caggcgtgtt
     2881 tggatatgcc gtctgaaaag tacgggattc gtgcggtaaa actttgcggc ggcaaatgtg
     2941 cgataatacg cgccgtattg ccgcttttgc gaagctgttc cgcaaacata cgggcggcgt
     3001 ggacgacgta taaccggata cccgcctgac gcgggttttt tacggaaggg gggcaaaaat
     3061 gcctaatccg ctttacagac agcatatcat ctccatttcg gatttgtcgc gcgaacagtt
     3121 ggaatgcctg cttcagacgg cattgaagct gaaggcgcat ccgcgcggcg atttgttgga
     3181 aggcaaactt atcggttcgt gcttctttga accgtccacg cgcacgaggc tgtcgtttga
     3241 aacggcggtg cagcggctgg gcggcaaggt catcggcttt tcggacggcg cgaataccag
     3301 tgccaaaaaa ggcgagacgc ttgccgatac cgcccgcatc atttccggct acaccgacgc
     3361 aatcatccaa cgccacccca aagacggcgc ggcgcgcgtg gcagcggagt tttcgcgcgt
     3421 ccccgtcatc aacgccggcg acggcaccaa ccagcacccc agccagacct tgttggatct
     3481 ggtaacgatt tatgaaacgc aggggcgttt ggacaagctc aaaatcgcca tggcgggcga
     3541 cttgaaatac gggcgcaccg tgcattcgct ttgtcaggcg ttgaaacgct ggggctgcga
     3601 atttgccttt gtttcgccgc ccagcctcgc gatgcccgac tacattaccg aagagttgga
     3661 cgaagccggc tgccgatacc gtatcctcgg cagtttggaa gaggcggcgg aatgggcgga
     3721 catcctgtat atgacccgcg tccagcgcga acgtttcgat gaacaggaat ttgccaaaat
     3781 ccaaggcaaa ttcaacctcg aagcgtctat gctcgcccac gccaaaccga acctgcgcgt
     3841 gctgcaccct ttgccgcgcg tggacgaaat ccatcccgat gtcgatgcca cgccgcacgc
     3901 ctattatttc gagcaggcga ccaacggcgt ttatgcgcgt atggcgatat tgtcgctggt
     3961 gttgaacgaa gaagtgtgag gaaccgatat ggaaaccccg aaactcagtg tcgaagccat
     4021 tgaaaaaggt acggttatcg accatattcc cgccggcagg gggctgacca tcctgcgcca
     4081 gttcaaactt ttgcactacg gcaacgcggt aaccgtgggc ttcaacctgc ccagcaaaac
     4141 ccaaggcagc aaagacatca tcaaaatcaa aggcgtgtgc ttggacgaca aagccgccga
     4201 ccgcctcgcc ctgttcgccc ccgaagcggt ggtcaacacc atcgacaatt tcaaggtcgt
     4261 gcagaagcgg catttgaacc tgcccgacga aatcgccgaa gtgttccgct gtccgaacac
     4321 gaattgcgcc ggccacggcg agccggtcaa aagccggttt tatgttaaaa agcacaacgg
     4381 gcagacgcgg ctgaaatgcc actactgcga aaaaacctac agccgggatt cggtggcgga
     4441 agcctgacgg attcccttaa accgagtggg cggcatttcg tctgccgcct gttttgccaa
     4501 tctgaaatgg aatgatgatg cacgcttctg tccaaagccg tttcgcaccg atactttatg
     4561 ttttgatttt ctttgccggt tttttgaccg cgcaaatctg gttcaatcag aaagcctata
     4621 ctgaagagct gcctccgctt ctgtccgcat tgtccgccgt cgcgctggtg tggctggcgt
     4681 gggcgttcgt gtcggcgcgt tcaaaggcca aggcggaaaa gttctaccgc gaaaaaatga
     4741 tacagaacga aagcatacac cccgtcctgc acgcctcttt gcaacacttg gaacacaagc
     4801 cgcaaatact cgccctgctg gtcaaaaacc acggcaaagg gatggcggaa caggtcaggt
     4861 tcaaggcgga agtgctgccc gacgacgaag acgcgcgcac gattgccgcc gagttggcaa
     4921 aaatggatat gttcgcattg gggacggacg cggtcgcctc gggcgaaacc tatggacgcg
     4981 tgttcgccga tattttcgag ttgtcggcgg ctttggaagg gcgcgcgttc aaaggaatgt
     5041 tgaaactgac ggcggaatat aaaaacatct tcggcgatgc ctgccgttcg gaaacggcgt
     5101 tggagttggg cgcactcaat caggcgttgc aggagatttc aaaaacatcg gaaaagtcca
     5161 aacggatatt ttattgaaga tggaaaaatg ccgtctgaaa cggaaggtgt ttcagacggc
     5221 atttttgtcg gatgattaat tattcggagc ggttgaagcc aaacttcacg cggctgcggc
     5281 cctgatccgg tatattgtcc aaatcgcgtc ccggattggc ggcggtgtcg cctacggaaa
     5341 tatcggagat gttttccaaa atgatggcgg acgacaggtg ttcggaggtg cggtaaacca
     5401 ttgccaagcc cacttcttcg gcaggagtgg aaatcagctc gacggtatcc ctgcttttga
     5461 aattgttgga gaggtcgacc tgcatcgttt tcttgcgttt gtagaggctc aaaaccgtgc
     5521 ctttgtccaa accgtccgcc tcgcctttgt cgatggtgat ggtttgaaac tggccggcaa
     5581 tccttgtgcc ttcaaacacg gaaacgattt tagcctgaac cgggcgggac ggttcgtgcg
     5641 gcatcatgtt gaagcggtcg gtgtcttccg gcattttcat caggtagtcg ccctgctgta
     5701 tttcggaaat ggcggtttcg accaccagcg gctgtatcga aggggtgcgc agcggggtaa
     5761 tcaaaggatg ggtgcgggta tggtattcgt tgtctttcgg ccgttctcca gcctgtttcg
     5821 agcgttgttc gaggacagag tcggtatagt cgagggagcg cacgatgccg ctgaatgcga
     5881 cttcctgccc gaggaattta cccgtatccg gatcggtgat gtttttattg attcggtagg
     5941 tcaggtagcg gcccggctct ttcaggcctt tggtgtaaac cctggtgcct ttggtgtaca
     6001 gcagcctgcc ttccgggccc gagagcaggc gcggcgcggc agcggtttct ttgcgggaaa
     6061 cgatttgcgg atgccgcata aagatgcggt agaagttgac atcgatggcg ggaataccgt
     6121 atccggacac ttccttatcc ggactcattt tgacgacggg gatgccgtct gtctgttcca
     6181 agccgaggcg cggttcgccg tcaacgtggc gcaacaccaa tacctggtcc ggataaatca
     6241 ggtcgggatt gtggatttga tcccggttcg cgtcccacag gcggccccat tgccacgggc
     6301 tgtacaggta tttgcccgaa atgccccaca gggtgtcgcc ctgtttgacc gtgtagcgtt
     6361 ccggcgcgtt cgggcgcacc tccaaatttg ccgccaaagt ttgtgttgag aatgccatac
     6421 ctgccgcgca gagcagggtt ataatacgac gttgcataac cgttcccctt atctgataaa
     6481 tttcggtttg tcttgcttga ttgggttgga aaaagcggcg gcagcccctc gggatgtgcc
     6541 gcgtgataaa aaatgttccg cattttaaca tcgaattatc cgcaccatca cggtaattat
     6601 gaaaaacagg cggcgtatcc gccgaaggaa agagaaaatt atggctttat tgaatatctt
     6661 gcaatatccc gacgagcgtc tgcacacggt ggcaaagcct gtcgaacaag tcgacgagcg
     6721 catccggaag ctgattgccg atatgtttga aacgatgtac gaatcgcgcg gcatcgggct
     6781 ggcggcgacg caggtcgatg tgcacgagcg cgtggtcgtg atggatttga ccgaagaccg
     6841 cagcgaaccg cgcgtgttca tcaaccccgt catcgttgaa aaagacggcg aaaccactta
     6901 cgaagagggc tgcctgtccg tgccgggcat ttacgacacc gtaacccgcg ccgaacgcgt
     6961 caaggtcgag gctttgaacg aaaaaggcga aaagttcacg ctggaggcgg acggcttgtt
     7021 ggcgatttgc gtgcagcacg agttggacca cctgatgggc atcgtgtttg tcgaacgcct
     7081 ttcccaactc aagcaggggc ggattaagac caagctgaaa aaacgtcaga aacatacgat
     7141 ttgacccttt tgccgtgccg tctgaacgct gcaaagtttt cagacggcac ggtcttgtcc
     7201 gacaacctta cgcatacgca ggaatatgct atgaaagtca tctttgccgg cacgcccgat
     7261 tttgccgccg ccgccttaaa agccgttgcc gccgccggtt ttgaaattcc gctggtgctg
     7321 acccagcccg accgtccgaa agggcgcggt atgcaactga ctgccccgcc cgtcaaacaa
     7381 gccgcgctgg aactcggttt gcgcgtcgaa cagcccgaaa agctgcgcaa caacgccgaa
     7441 gccctgcaaa tgctcaaaga ggtcgaggca gacgtaatgg tggttgccgc ctacggtttg
     7501 attctgccgc aagacgtgtt ggatgtgccg aaacacggct gcctcaatat ccacgcctcg
     7561 ctgctgcccc gttggcgcgg cgcggcgccg attcagcgcg cgattgaggc aggcgatgcc
     7621 gaaaccggcg tgtgcattat gcagatggac atcggtttgg acaccggcga tgtggtcagc
     7681 gaacaccgct acgccatcca accgaccgat accgccaacg aagtccacga cgcgctgatg
     7741 gaaatcggtg cggcggcggt tgttgccgat ttgcaacagc ttcaaagcaa aggccgtctg
     7801 aacgcggtca aacagcccga agaaggcgta acttacgccc aaaaattaag caaagaagag
     7861 gcgcgtatcg attggagcga aagcgcggcg gttatcgaac gcaaaatccg cgccttcaac
     7921 cccgtgcctg ccgcgtgggt tgagtatcag ggcaagccga tgaaaatccg gcgtgccgaa
     7981 gtggtggcgc aacaaggcgc ggcaggcgaa gtgttgtcct gttcggcgga cggtttggtc
     8041 gttgcctgcg gcgaaaacgc gctgaagatt accgaattgc agcctgccgg cggcaggcgg
     8101 atgaatatcg cggcgtttgc agcaggacgg catatcgaag cagggacgaa gctgtaaatc
     8161 ccttcagacg gcattccgat ccgcaaacgg gaatgccgcc tgaaaccatc agtcgaagaa
     8221 agcgaatcac ataatatgag tatggcactt gcccaaaaac ttgccgccga cagcattgcg
     8281 gcggttgccg aaggacgcaa ccttcaggac gtgttggcgc aaatccgcac cgcgcatccc
     8341 gaccttacgg cgcaggaaaa cggcgcgttg caggacatcg cctacggttg ccagcgttat
     8401 ttgggcagtt tgaaacatat gctcgcgcag atgctgaaaa aaccgattga caatccgcag
     8461 ctcgaaagcc tgcttttggc ggcgttgtac caactgcatt acacgcgcaa cgcgccgcac
     8521 gccgtggtca atgaggcggt ggaaagcata gccaaaatcg ggcgcgggca gtaccgttcg
     8581 tttgccaacg cggttttgcg ccgctttttg cgcgaacgcg acaagctcgc ggcttcctgt
     8641 aaaaaagacg atgtggcgaa acacaacctg ccgctgtggt gggtggctta cctgaaaaac
     8701 cattatccga aacactggca caacatcgcc gccgcgctgc aatcccatcc gccgatgacg
     8761 ttgcgcgtca accgccggca cggcaacgcc gaaagctatt tggaaaaact ggtggcggaa
     8821 ggtattgcgg ctaaggcgtt ggacgaatat gcggttacgt tggaagaagc cgtgccggta
     8881 aaccgtctgc ccggtttttc agacggcatt gtttcggtac aggacttcgg cgcgcagcag
     8941 gcggcgtatt tgttaaaccc gaaagacggc gaacggattt tggacgcgtg cgccgcgccg
     9001 ggcggcaaga cggggcatat cttggaactg gcggattgcc gcgttaccgc cttggacatc
     9061 gatgcaggcc gtctgaaacg ggtggaggac aatatcgccc gtttgggctt tcagacggca
     9121 tcggcggcgt gtgccgatgc gcgggatttg gcggcgtggt atgatggaaa gcctttcgac
     9181 gcaatccttg ccgacgtgcc atgcaccgct tccggcgtgg cgcggcgcaa tcccgacgtg
     9241 aaatggctgc gccgtccgac cgacgcgctc aaaaccgccc gccagcagga agccctgctg
     9301 gacgcacttt ggcagacgct gaaacagggc ggcagaatgc tgcttgccac ctgttccgtg
     9361 ttcgtcgaag aaaacgacgg gcaattgcaa aaattcctca accgccatgc cgatgccgaa
     9421 ccgatcgaat cgcgggtgct tttaccgaac aaacaccaag atggctttta ttacgcgctt
     9481 attcaaaagc attaaacaat ggcttgtgct gctgccgatg ctttccgttt tgccggacgc
     9541 ggcggcggag gggatagatg tgagccgcgc cgaagcgagg ataaccgacg gcgggcagct
     9601 ttccatcagc agccgcttcc aaaccgagct gcccgaccag ctccaacagg cgttgcgccg
     9661 gggcgtgccg ctcaacttta ccttaagctg gcagctttcc gccccgataa tcgcttctta
     9721 tcggtttaaa ttggggcaac tgattggcga tgacgacaat attgactaca aactgagttt
     9781 ccatccgctg accaaccgct accgcgttac cgtcggcgcg ttttcgacag actacgacac
     9841 cttggatgcg gcattgcgcg cgaccggcgc ggttgccaac tggaaagtcc tgaacaaagg
     9901 cgcgctgtcc ggcgcggaag caggggaaac caaggcggaa atccgcctga cgctgtccac
     9961 ttcaaaactg cccaagcctt ttcaaatcaa tgcattgact tctcaaaact ggcatttgga
    10021 ttcgggttgg aaacctctaa acatcatcgg gaacaaataa tgcgccgttt tctaccgatc
    10081 gcagccatat gcgccgtcgt cctgttgtac ggactgacgg cggcaaccgg cagcaccagt
    10141 tcgctggcgg attatttctg gtggattgtt gcgttcagcg caatgctgct gctggtgttg
    10201 ttcgccgttt tggcacgtta tgtcatattg ctgttgaaag acaggcgcga cggcgtattc
    10261 ggttcgcaga ttgccaaacg cctttccggg atgtttacgc tggttgccgt actgcccggc
    10321 gtgtttctgt tcggcgtttc cgcacagttt atcaacggca cgattaattc gtggttcggc
    10381 aacgataccc acgaggcgct tgaacgcagc ctcaatttga gcaagtccgc attgaatctg
    10441 gcggcagaca acgcccttgg caacgccatc cccgtgcaga tagacctcat cggcgcggct
    10501 tccctgcccg gggatatggg cagggtgctg gaacattacg ccggcagcgg ttttgcccag
    10561 cttgccctgt acaatgccgc aagcggcaaa atcgaaaaaa gcatcaaccc gcacaagctc
    10621 gatcagccgt ttccaggtaa ggcgcgttgg gaaaaaatcc aacaggcggg ttcggtcagg
    10681 gatttggaaa gcataggcgg cgtattgtac gcgcagggct ggctgtcggc aggtacgcac
    10741 aacgggcgcg attacgcctt gtttttccgt cagccggttc ccaaaggcgt ggcagaggat
    10801 gccgtcttaa tcgaaaaggc aagggcgaaa tatgctgagt tgagttacag caaaaaaggt
    10861 ttgcagacct ttttcctggc aaccctgctg attgcctcgc tgctgtcgat ttttcttgca
    10921 ctggtcatgg cactgtattt cgcccaccgt ttcgtcgaac ccgtcctatc gcttgccgag
    10981 ggggcgaagg cggtggcgca aggcgatttc agccaaaccc gtcctgtttt acgtaatgat
    11041 gagttcgggc gtttgaccaa gttgttcaac cacatgaccg agcagctttc catcgccaaa
    11101 gaatcagacg agcgcaacag gaggcgcgaa gaagccgcca gacattatct cgaatgcgtg
    11161 ctggaggggc tgaccacggg cgtggtggtg tttgacgaac aaggccgtct gaaaaccttc
    11221 aacaaagcgg cggaacagat tttggggatg ccgcttaccc ccctgtgggg cagcagccgg
    11281 cacggttggc acggcgtttc ggcgcagcag tccctgcttg ccgaagtgtt tgccgccatc
    11341 ggcgcggcgg caggtacgga caaaccggtc catgtgaaat atgccgcgcc ggacgatgcc
    11401 aaaatcctgc tgggcaaggc aaccgtcctg cccgaagaca acggcaacgg cgtggtaatg
    11461 gtgattgacg acatcaccgt tttgatacac gcgcaaaaag aagccgcgtg gggcgaagtg
    11521 gcgaagcggc tggcacacga aatccgcaat ccgctcacgc ccatccagct ttccgccgaa
    11581 cggctggcgt ggaaattggg cgggaagctg gatgagcagg atgcgcaaat cctgacgcgt
    11641 tcgaccgaca ccatcgtcaa acaggtggcg gcattgaagg aaatggtcga agcattccgc
    11701 aattatgcgc gttccccttc gctcaaattg gaaaatcagg atttgaacgc cttaatcggc
    11761 gatgtgttgg cattgtatga agccggtccg tgccggtttg cggcggagct tgccggcgaa
    11821 ccgctgatgg tggcggcgga tacgaccgcc atgcggcagg tgctgcacaa tattttcaaa
    11881 aatgccgccg aagcggcgga agaagccgat gtacccgaag tcagggtaaa atcggaagcg
    11941 gggcaggacg gtcggattgt cctgacggtt tgcgacaacg gcaaagggtt cggcagggaa
    12001 atgctgcaca acgccttcga gccgtatgta acggacaaac cggcgggaac gggattgggt
    12061 ctgcctgtgg tgaaaaaaat cattgaagaa cacggcggcc gcatcagcct gagcaatcag
    12121 gatgcgggtg gcgcgtgtgt cagaatcatc ttgccaaaaa cggtaaaaac ttatgcgtag
    12181 cagcgatatt ttaattgtag acgacgaaat cggcatccgc gacctgctgt cggaaatcct
    12241 gcaggacgaa ggttattcgg tcgcattggc ggaaaacgcc gaagaggcgc gcaagctgcg
    12301 ccatcaggcg cgccccgcga tggtgctgct ggatatttgg atgcccgatt gcgacggcat
    12361 cacccttttg aaggagtggg cgaaaaacgg gcagctcaat atgccggtgg tgatgatgag
    12421 cgggcatgcc agcatcgata ccgccgtgga agccaccaaa atcggcgcga tcgatttttt
    12481 ggaaaaaccg atttccctgc aaaagctgct gtctgccgtc gaaaacgcgt tgaagtacgg
    12541 tgcggcgcaa accgaaacgg ggcctgtatt cgacaagctg ggcaacagtg cggcgattca
    12601 ggaaatgaac cgtgaggtag gggctgcggt gaaatgtgcc tctcccgtac ttttgacggg
    12661 cgaggcgggt tcgccgtttg aaacggtggc acgctatttc cataaaaacg gtacgccgtg
    12721 ggtcagcccg gcaagggtcg aatatctgat cgatatgccg atggaactgt tgcagaaggc
    12781 ggagggcggc gttttgtatg tcggcgacat cgcccagtac agccgcaaca tccaagccgg
    12841 tattgccttt attgtcggaa aggcggaaca ccgccgcgtc agggtggtcg catcgggcag
    12901 cagggcggca ggttcagacg gcattgcctg cgaggaaaag ctggcggaac tgctgtcgga
    12961 atcggtcgtc cgtattccgc cgctgcgtat gcagcatgaa gacattccct tcctgataca
    13021 ggggattgcc tgcaatgtgg cggaaagcca aaagattgcg cctgcctcat tcagtgaaga
    13081 ggcacttgcc gcattgaccc gttacgactg gccgggaaat ttcgaccaac tgcaaagcgt
    13141 cgttgcaacg ctgttgttgg aggcggacgg acaggaaatc ggcgcggcgg cggtttcttc
    13201 ccttttgggg cagaatgtgc ctgccgaggg agcggaagat atggtgggcg ggtttaattt
    13261 caacctgccc ctgcgcgaat tgagggagga ggtggagcgg cgttatttcg agtaccacat
    13321 cgcccaagaa ggtcagaata tgagcaaagt ggcgcagaag gtcggtttgg aacgcacgca
    13381 cctttaccgc aaactcaaac agctcggcat cggcgtttcg cgccgggcgg gggaaaaaac
    13441 cgaagaatag gcccggacgg ccggtttacc ggctgcgggc ttttgttttc agacggcatt
    13501 tggtgcaaat gccgtctgaa atcgtaaggg gacggatttt atgacagagg acgaacgttt
    13561 cgcgtggctg caattggcgt ttacgcccta tatcggcgcg gaaagcttcc tgctgctgct
    13621 gcgccgtttc ggcagcgcgt caaacgccct gtccgcaccg gcggaacagg tcgccccggc
    13681 ggtgcggcac aagcaggcgg ccgaggcttg gcgcaatgcg gaaaaacgcg cctcggcgcg
    13741 gcaggcggca gaagcggcgt tggaatggga aatgcgggac ggatgccgcc tgatgctgct
    13801 tcaggatgaa gatttccccg aaatgctgac gcaggggctg accgcgccgc cggttttgtt
    13861 tttgcgcggc aacgtgcggc tgctgcacaa gccttccgcc gccatcgtcg gcagccgcca
    13921 tgccacgccg caggcgatgc ggattgccaa agatttcggc aagtcgttgg gcgggcaaaa
    13981 tatccccgtt gtgtcgggta tggcttccgg tatcgatact gccgcccatc agggcgcact
    14041 ggaggcagaa ggcggcacca tcgccgtgtg ggggacgggt atagaccgca tttacccgcc
    14101 gtccaataaa aaccttgcct atgaaatcgc cgaaaaagga ttgattgtca gcgagtttcc
    14161 catcggtacg cgcccgtatg ccggcaactt tccgcgccgc aaccgcctga ttgccgcgct
    14221 gtcgcaggtt acgctggtgg ttgaagctgc gttggaatcc ggttcgctga ttaccgccgg
    14281 cttggcggca gaaatggggc gcgaagtgat ggcagtaccc ggttcgatag acaatccgca
    14341 cagcaaaggc tgccacaaac tgattaaaga cggcgcgaaa ctgacggaat gtttggacga
    14401 catcctgaac gaatgcccgg ggctattgca aaatacgggt gcttcgtcat attctataaa
    14461 taaggatacg tccgacacgg gcagccgcgc cgttcagacg gcatacgccc cgccgccttc
    14521 gcctgaaggc aaaatgccgt ctgaaggggc ggcatgcggc acagaccccg gcggcatact
    14581 ggataaaatg ggtttcgacc cggttcatcc cgacgtgctt gccgagcagc ttgctatgcc
    14641 tgccgcagat ttgtatgccg cactgttgga attggaattg gacggcagcg ttgccgcaat
    14701 gcccggcggc agataccagc gtatccgaac ttgaacgcac tttatattaa ggaacacgaa
    14761 tgaccgaagt catcgcctac ctcatcgaac atttccaaga tttcgatacc tgtccgccgc
    14821 ccgaagactt gggtatgctg cttgaagaag cgggtttcga taccatggaa atcggcaaca
    14881 ccctgatgat gatggaagta ttgctcaaca gctccgaatt ttccgccgaa cctgccgaca
    14941 gcggcgcatt gcgcgtgtac agtaaagaag aaaccgacaa cctgccgcag gaagtgatgg
    15001 ggctgatgca gtatctgatt gaagaaaaag ccgtcagctg cgaacagcgg gaaatcatca
    15061 tccacgcgct catgcacatt ccgggcgacg aaattaccgt agataccgcc aaagtgctga
    15121 ccctgctgct tttatgggca aacaagagcg agctgcccgt gttggtcggc gacgagctga
    15181 tgagcgcgct tttactcgac aacaaaccca cgatgaactg aagcggcttc agacggcccg
    15241 cccgaggccg tctgaaacgt cggcatcaaa accaccatcc agagaacgac aaatggcgaa
    15301 aaacctatta atcgtcgaat ccccgtccaa agccaaaacc ctgaaaaaat atttgggcgg
    15361 cgattttgaa atccttgcat cctacggaca cgtccgcgac ctcgtcccca aaagcggcgc
    15421 ggtcgatccc gacaacggct ttgcgatgaa ataccaattg attagccgca acagcaaaca
    15481 cgtcgatgcc atcgttgccg gtgccaaaga agctgaaaac atctacctcg ccaccgaccc
    15541 ggatagggaa ggcgaagcca tttcctggca tcttttggaa atcctcaaat ccaaacgcgg
    15601 cttgaaaaac atcaagccgc agcgtgtcgt gttccacgaa atcaccaaaa acgccgtgct
    15661 cgatgccgtt gcccatccgc gcgaaatcga aatggacttg gtcgatgcac aacaagcccg
    15721 ccgtgctttg gactatttgg tcggctttaa cctttcgcca ttgttatgga aaaaaatccg
    15781 ccgaggtttg agcgcggggc gtgtgcaaag ccctgctttg cgcctgattt gtgagcgcga
    15841 aaacgaaatc cgcgcgtttg aagcgcagga atattggacg gtgcatctcg acagccacaa
    15901 aggccgcagc aagttcaccg ccaaactcgc ccaatacaac ggcgcgaaac tcgaacaatt
    15961 cgacctgtcg aacgaagccg cgcaagccga cgtattgaaa gaactcgaag gcaaagaagc
    16021 cgtcgttacc gccattgaaa agaaaaagcg cagccgcaat cctgccgcgc cgttcaccac
    16081 ttctaccatg cagcaggatg ccgtgcgcaa actcggcttc accaccgacc gcaccatgcg
    16141 taccgcccaa cagctttatg aaggtataga cgtagggcag ggcgcgatcg gtctgattac
    16201 ctatatgcgt accgacagcg tgaatttggc ggatgaagcg ttaaccgaaa tccgccatta
    16261 cattgaaaac aaaatcggca aagaatatct gccgagtgcc gccaaacaat acaaaaccaa
    16321 atccaaaaac gcccaagaag cccacgaagc catccgtccg acttccgtgt accgcacgcc
    16381 cgaaagcgtc aaacccttcc tgagcgcaga ccagttcaaa ctctatcaaa tgatttggca
    16441 gcgtaccgtc gcctgtcaga tgacgcctgc caaattcgac caaaccaccg tcgatattac
    16501 cgtcggcaaa ggcgtattcc gcgtaaccgg acaagtgcaa accttcgcag gcttcttgag
    16561 cgtttatgaa gaaagcagcg acgatgaaga aggcgaagac agcaaaaaac tgcccgaaat
    16621 gagcgaaggc gataaattgc ccgtggacaa actctacggc gaacaacact ttaccactcc
    16681 gccgccgcgc tacaacgaag ccacgctggt taaagccctc gaagaatacg gcatcggccg
    16741 cccctcgacc tacgccagca tcatctccac gctcaaagac cgcgaatacg ttacccttga
    16801 gcaaaaacgc ttcatgccca ccgacacagg cgacatcgtc aacaaattcc tgaccgaaca
    16861 cttcgcccaa tacgtcgatt accacttcac cgccaaactc gaagaccagc ttgacgaaat
    16921 tgccgacggc aaacgccaat ggattccctt gatggacaaa ttctggaaac cgttcatcaa
    16981 acaagtggaa gaaaaagaag gcatcgaacg cgccaaattt accacgcagg aacttgatga
    17041 aacctgcccg aaatgcggcg aacacaaact gcaaatcaaa ttcggcaaaa tgggtcgttt
    17101 tgttgcgtgt gccggttatc ccgagtgcag ctacacgcgc aacgtcaacg aaactgccga
    17161 agaagccgcc gagcgcatcg ccaaagccga ggctgaacaa gccgaactcg acggacgcga
    17221 atgtcctaaa tgtggtggtc gcctagtgta caaatacagc cgaaccggca gcaaattcat
    17281 cggctgcgcc aactacccca aatgcaaaca cgtcgagccg ctggaaaaac cgaaagatac
    17341 cggcgtccag tgtccgcaat gcaaaaaagg caacctcgtc gagcgcaaat cccgctacgg
    17401 caaactgttt tacagttgca gcacctatcc cgactgtaac tacgccacat ggaacccacc
    17461 cgttgcagaa agctgtccaa aatgcgcatg gccggttttg accatcaaaa ccaccaaacg
    17521 ctggggtgta gaaaaagtct gcccacaaaa agaatgcggc tggaaagaac agattgaacc
    17581 gcccgcgccg aaagagtgag atcaggttgg tttgaaagag aaaaggtcgt ctgaaaaatt
    17641 ttcagacgac ctttgctttt ctgtgattgg tttatttgaa tccgcgtgtt gttttaaagt
    17701 ccgataaaat ccggttcatt tcaggcgcaa acaaggcgat gtaatcgtaa gatagaccgc
    17761 gactggcact gggatgggga aagcagacga cttcgcaatc ttcaaacgat tggaatttga
    17821 cattgaaacg tgtaccgtca aattcttttt gcaccgtctc cagcggtttg gtctgcttac
    17881 cgaccaactg ctcgaagcgt ggcagtacat tttggttgtt cagaaaatcc gccaacctgc
    17941 tgcccatgaa gaggatgact ttcggacgca gtttttcgat gtggtagaga aaattatcga
    18001 tgtgctcggg ttgtgtgaac ttgtcgggat tgtcgatagt gttgccctgt gtagcagccc
    18061 agttggtttg aaccagggat ttttcaaatg caccgcccaa tccattttcg tctaaggggt
    18121 gtccccacat ttcaaaccaa ttttttatcg tattgtcgta acgccacttc tttgcctgct
    18181 ctccgaaata gagggatttg tttgcaaatg tatggtcgat tttgttttca gggagtttgt
    18241 attcacctgc tacataagca gcctcatcgg ctttactcca accccattca tacccacaaa
    18301 tcattaaacc atgtttgtcg ttgtagcctt tgaacagact gttgctcaaa ttcaaatcct
    18361 tcatcatgaa ctcttccttt taaaatttaa gagcgattga cttcaatgtt tttagatggg
    18421 gtggaaaaat ccttgtgtag gcaacataaa ttcaataaat ttcttgataa ttcgaaacct
    18481 actaatagcg cacctataaa agctttttca ttacgttcag catgacggtc acgtcgttca
    18541 tattttttac gcttgctgtt ccctgttatt acagctaagc caagtgatat ggcgagaatt
    18601 gcccaaacaa tagtacttaa taacaatttt ccacatacta tcaataagga aagaaaaaac
    18661 cttttagtat tagatcgata ggttataatc catgcccatg aaaatgcaat aagagttata
    18721 cataagatac aaactgacag gatttcttta tttttaatta aataacttag agcgatgagg
    18781 atgacaggtg tcaagaaaat aatagttaca tcccgatagc tataaaagaa aactgcccta
    18841 ttttgaatgt ggagatgtgc acagaatcca atatagctaa ggataatagt taatataata
    18901 aaaaaagacc accaagggta aagagatagg aattccatgt tttccttttt ttgtaaaaag
    18961 gaaaaaattt tatctaagag ttaattgcct aaccagccag aagaagttta aaatctatcc
    19021 caataattca accatctata cagaaagttc agcttatgga aacccacgaa aaaatccgcc
    19081 tgatgcgcga attgaataaa tggtcccagg aggatatggc ggaaaagctg gcgatgtcgg
    19141 caggagggta tgccaaaatc gaacggggcg aaacgcagtt gaatatcccg cgtttggagc
    19201 agttggctca gattttcaaa atcgatatgt gggacttgct caaatcgggc ggtggtggga
    19261 tggtgtttca gattaatgaa ggtgatagtg gtggcgatat tgcgttgtat gcgtcgggtg
    19321 atgtttcgat gaaaatagaa tttttaaaaa tggagttgaa acactgcaaa gaaatgttgg
    19381 aacaaaaaga caaagaaatc gagctgctcc gcaagctgac cgaaaccgtt taaacagata
    19441 tgccgtctga aaaaagtttt cagacggcat attctttgac aggtcttgta taataccgtt
    19501 tgaacttaca ggtttttgat tatggcggca ggcaaacata ccaaacacag caaccgggta
    19561 cgcattatcg gcgggcaatg ccggggcagg aaattgagtt tcacatccgc cgacggactg
    19621 cgtccgacac ccgacagcgt gcgtgaaaag ctgtttaact ggctgggaca ggatttgacg
    19681 ggtaaaacgg ttttggatct cttcggaggc agcggcgcac tcggtataga agccgcttcg
    19741 cgcaacgcca aacgcgtgct gatttcggat aacaaccgcc aaaccgtgca gaccttgcag
    19801 aaaaacagtc gcgaactggg tttggggcag gtgcaaatcg tctgttcaga cggcatcgca
    19861 tatttgaaga ccgtatccga acagtttgat gttgtctttc tcgacccgcc gtttgcatgg
    19921 caggactggc aaatcctgtt tgatgccttg aagccgtgcc tgaacccccg agcattcgtc
    19981 tatctcgagg cgggtacgct gccggatatt cccgattggc tgacggaata tagagaaggg
    20041 aaatcggggc agagtacatt cgaattaagg gttttccaag tggctgaata atatgcgctt
    20101 tgataatcat ttccgagttg taaacattcg tttgcaaccg tccggttcaa aaaaaccttg
    20161 tgctataatc cgcgcccgcc cggttttgat aatttagtgg aaaaggaaaa gaaatgtcgc
    20221 tttttattac cgacgagtgc atcaactgcg acgtatgcga acccgaatgc cccaatgatg
    20281 ccatttccca aggcgaggaa atttacgaaa tcaaccccaa cctctgcacg cagtgcgtcg
    20341 gacactacga tgagccgcag tgccagcagg tttgcccggt ggactgcatc ctgattgacg
    20401 aagaacatcc cgaaacccat gacgagttga tggcgaaata cgaaaagatt atccagttta
    20461 aataaattct ttttaaaaca tcaaattatg tctgttttga aataaaatca aaaaaaaact
    20521 tgacggaaaa gcaagccgct aataaactaa cgttctcttt tggagggatt cccgagcggt
    20581 caaagggggc agactgtaaa tctgttgcga aagcttcgaa ggttcgaatc cttctccctc
    20641 caccaaaatt cttacttggg gcagtagcga gtaatgcggg tgtagctcaa tggtagagca
    20701 gaagccttcc aagcttacgg tgagggttcg attcccttca cccgctccaa acaattaggc
    20761 ccatgtagct caggggtaga gcactccctt ggtaagggag aggtcggcag ttcaaatctg
    20821 cccatgggca ccatctctcg attattcatt tctttaaggc ttagatatat aggatattgc
    20881 catggctaag gaaaaattcg aacgtagcaa accgcacgta aacgttggca ccatcggtca
    20941 cgttgaccat ggtaaaacca ccctgactgc cgctttgact actattttgg ctaaaaaatt
    21001 cggcggtgct gcaaaagctt a
//
LOCUS       DAXHRP010000017        20607 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.017, whole genome shotgun sequence.
ACCESSION   DAXHRP010000017 DAXHRP010000000
VERSION     DAXHRP010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.017"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(63..239)
                     /locus_tag="ACFM72_000503"
     CDS             complement(63..239)
                     /locus_tag="ACFM72_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257119.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
     gene            complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACFM72_000504"
     CDS             complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACFM72_000504"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HFC6257120.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLQGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMEMEEVVEALE
                     DK"
     gene            complement(1724..2860)
                     /locus_tag="ACFM72_000505"
     CDS             complement(1724..2860)
                     /locus_tag="ACFM72_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFC6257121.1"
                     /translation="MDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILE
                     AAKKASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQ
                     STAHATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRS
                     DYPWFTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDK
                     DARRFQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGE
                     RTLTHGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDG
                     YDFWGNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(2934..3371)
                     /locus_tag="ACFM72_000506"
     CDS             complement(2934..3371)
                     /locus_tag="ACFM72_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257122.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPRSLYFVQALFFIFGLTVWRYCVSGGGIC"
     gene            complement(3394..4872)
                     /locus_tag="ACFM72_000507"
     CDS             complement(3394..4872)
                     /locus_tag="ACFM72_000507"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HFC6257123.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKFWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRLLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4897..6642)
                     /locus_tag="ACFM72_000508"
     CDS             complement(4897..6642)
                     /locus_tag="ACFM72_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HFC6257124.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGVEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="ACFM72_000509"
     CDS             complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="ACFM72_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HFC6257125.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="ACFM72_000510"
     CDS             complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="ACFM72_000510"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HFC6257126.1"
                     /translation="MSGAESYRHITVLLDEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="ACFM72_000511"
     CDS             complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="ACFM72_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HFC6257127.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
     gene            8707..9897
                     /locus_tag="ACFM72_000512"
     CDS             8707..9897
                     /locus_tag="ACFM72_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC6257128.1"
                     /translation="MSGNPINLHKLTLIMPLPLPSPEARQSSLKLQTLIAEKIGKHGN
                     WIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLARQLQELLSQT
                     AGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQARAPEASQKVV
                     HLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTYSARPLHDLQ
                     LSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRN
                     QGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYLPQSHFLLNL
                     GITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGIDWAGFRFGDI
                     CHKL"
     gene            10029..10105
                     /locus_tag="ACFM72_000513"
     tRNA            10029..10105
                     /locus_tag="ACFM72_000513"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10063..10065,aa:Met,seq:cat)
     gene            10113..10188
                     /locus_tag="ACFM72_000514"
     tRNA            10113..10188
                     /locus_tag="ACFM72_000514"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10146..10148,aa:Ala,seq:ggc)
     gene            complement(10375..11196)
                     /locus_tag="ACFM72_000515"
     CDS             complement(10375..11196)
                     /locus_tag="ACFM72_000515"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HFC6257129.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEITIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIVDVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11229..11870)
                     /locus_tag="ACFM72_000516"
     CDS             complement(11229..11870)
                     /locus_tag="ACFM72_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC6257130.1"
                     /translation="MKLKHLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEV
                     LEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVKLSGLK
                     YQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKL
                     TEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11873..12736)
                     /gene="ftsN"
                     /locus_tag="ACFM72_000517"
     CDS             complement(11873..12736)
                     /gene="ftsN"
                     /locus_tag="ACFM72_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC6257131.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKA
                     DEVEEKADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12842..14338)
                     /locus_tag="ACFM72_000518"
     CDS             complement(12842..14338)
                     /locus_tag="ACFM72_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HFC6257132.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLHPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLVQTDCQVPQMPSENTKLLDLVDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GGLMEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14352..14672)
                     /locus_tag="ACFM72_000519"
     CDS             complement(14352..14672)
                     /locus_tag="ACFM72_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HFC6257133.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15156..16682
                     /gene="putP"
                     /locus_tag="ACFM72_000520"
     CDS             15156..16682
                     /gene="putP"
                     /locus_tag="ACFM72_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HFC6257134.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            complement(16772..16939)
                     /locus_tag="ACFM72_000521"
     CDS             complement(16772..16939)
                     /locus_tag="ACFM72_000521"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257135.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            16931..20536
                     /gene="putA"
                     /locus_tag="ACFM72_000522"
     CDS             16931..20536
                     /gene="putA"
                     /locus_tag="ACFM72_000522"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HFC6257136.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRNDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSKKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTELAASGIQAVVEPDSPLASYTADLEGLLLVNGKPETVGISHVAALSP
                     LNSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4818 a         5952 c         5047 g         4790 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagggacttt ctcaatcacg caaatcgggt aactccccgg atttttgccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctc cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gggcgtacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcaccc agttcgccca tatcgcccat cacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatactgtc ggggttcgcg ttgtaggtat
      601 cgtcaatcag ggttgcgcct ttgatgccgg atttgacgtt cagacggcct ttgatattgc
      661 tgaagccttg caaaccttcc gccacatcgt tcagactcaa acccgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag cgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gaccgaaccg gtaatgccga acacaaacgg attcacattt tcacgccaca
     1321 cctttgccaa cgtttgcaat gcggcaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt ttttatcgcc tgttttactg tggtaaaaca
     1681 cagattattt tcccattctc attcggcatt ttttctgtac gtatcatttt ttagacgtat
     1741 ttttagtcga tttgcctttt cccgcatacc acggcgcggg gtcgtcgggc agtccgtcga
     1801 taaaggcaag gttattgcct tcgccctgca catcgggaac attcccccaa aaatcatagc
     1861 cgtcatcggg caactcgtcg gtttcgatac ccgtccaact gccgaatccg cgtaaaaaat
     1921 taaacgcgct gcgcctcact ttaatcattt cgcgccgcgt gtcatcggac gaaattttaa
     1981 ccagcggcac gccgtagctt tgacgcttcc acgcaccatg tgtcaacgtt cgctcgccgc
     2041 ctttaccgac atgcatcaaa ccgtggtcgg aaaagtaaac caaagaccag ctttctttat
     2101 tttcattcaa tatcttaact gtatcttcta aaaatttatc ggtttgcgcg atggtggaaa
     2161 catagcagga tattttttca gtttgatact gaaaccgccg cgcatcctta tccaaacgtg
     2221 tgcaaaaatc actgtgcgaa cccatcaggt gcatcacaat cagccgaggc ttcgtgcctg
     2281 catttcctat caaaacccgt ttgaacgccg gcaacaaaag gcggtcgctc aaccccgcgc
     2341 ttttgccata atcacccctt tgggtaaacc acggataatc gctgcgtagg gcataggtgg
     2401 aaatttcgtt ggcaaaatgc cccaacattc cttgattaga cagccacgcc gtccgaaaac
     2461 ccgcctgctt cgccaagctg acgatgttat tgttcggttc tcccggcagc cccaaagtct
     2521 gcggcagcga aagattcgtc gcgtgggcgg tcgattggta accgtttatc aacagccctt
     2581 tggtctgact caaaaaaggc gtatcgggca atgggaaacc gtaaacattc atataatccg
     2641 aacgcgcgct ttcaccgata accacaacat aatttttata cttgggcgca acatgacgga
     2701 tatgccatgt tgacgctttt tttgctgctt ccaaaatgtg ggcgcgcttg gcggcatatt
     2761 gtgccggcgc ggaagccaaa tcgtaataca ggtcgaaaat attcaacaac aggccggcat
     2821 caggttctcg caaatcttta tcgctggcga ttttatccat caccgcgcag gacaaaatca
     2881 aagtcaataa tatagtcagc catattttgc tgcggcgttt atagtttttt acgtcagcaa
     2941 ataccccccc ccgatacaca atatctccaa actgtcaagc caaaaatgaa aaataatgcc
     3001 tgcacaaaat aaagcgacct gggaagattg ccgacaaatt cacgcgcctc ggcaggattg
     3061 ctttccaata tcgaaccgac tatctgataa gacggcgcac catacagcca gccgaccggc
     3121 aaatataggg cggttgtgcc gacgtaaatc agtaaaacaa ctgaagaaac gcgcgggaaa
     3181 ccgcgtgcca ataataataa aaatacaacc gaagccaaag cacccacggc agaataacgg
     3241 tagccgtatt catattccaa gtgataacct gatgcgatgg ccgcgccaaa acaaaaggct
     3301 aaaagcgcgc aaatgcccaa tgtatttttt aatgtctgat ccatattttt tattcgggcg
     3361 gattgtttca tacgatgccg tccgaatatc ccattattta cgagttaaca aagcctgtcc
     3421 gacgatttca agatcggaaa aacggtgctt cacgccttgt acatcctgat agttttcatg
     3481 ccctttgccg gcaatcagga tgatgtcgtt tgcggcggct tgttcaaccg cataacggat
     3541 ggcggcggca cggtcggctt cgacgcattc gggcgcggga acggcaggca ggatgtcgtt
     3601 gatgatgtcg tgcggatttt ccaaacgcgg gttgtcgctg gtgacgacga ctttatccgc
     3661 accctgtacg gctgccgcgc ccatcagcag gcgtttgccg cgatcgcggt tgccgccgca
     3721 accgaatacg caccacaaag ccgcgccctg cggtttgatt tcctgcaagg tggcgagtgc
     3781 tttttccaat gcgtcgggcg tgtgggcgta atcgacgacg accaagggct tgccgctgtt
     3841 catgatgcag tccatgcgcc ctgaagcggg acggattttt gccagcacat ccaatacttt
     3901 atcaagcgga tagccgttgg cgcacagcaa ggcgatgcag gcggcgaggt tttgcgcgtt
     3961 gaaccgtccg agcaggcgcg tgcggcattt cccttcgccc cacggggttt ggaatacggc
     4021 tgctatgccg tctgaagagg cggtaaagtc ggtaatgcgg atgtcggcgt gttcgctgaa
     4081 gccgtagcta taaacggcca aatcgggaca atcttttttc agacgacctg cgagttccgc
     4141 gccgtattcg tcatccacgt tgatgactgc gtgtttcaag ccgtgccagt aaaacaggcg
     4201 cgacttgatg gcaccgtagg cttccatcgt gccgtggtag tcgaggtggt cgcgggtgag
     4261 gttggtaaag attgcgctgc ggaatgacac gccgttgacg cgcgactggt caagcccgtg
     4321 gctggagact tccatcgcgg cgactgttgc gccttgttga cggaaacggt agagcagggt
     4381 ttggacatcg acgggggcgg gtgtggtatg cgtggtttct tccaatgcac cccaaaagcc
     4441 gttgccgacc gtgccgacaa tggcggtttt ttcgcccaac aaatcggcag cttgcgccag
     4501 ccattgcgtg atggaggttt tgccgttggt tccggttacg ccccagaatt tgagaccgtc
     4561 tgaaacgttg ccgtaaactt gcgccgccaa tatgccggca cggtgtttca aatctttgat
     4621 gccttgattg gggactttcc attcgggatt ccacgcaaat ttgccgtcgt cgtcccaaaa
     4681 aacaaaagcc gcgccgttgg caacggcggc ggggatataa ctgcgtccgt cggcatattc
     4741 gcccggacag gcaacgaaaa tatcgccttg tttgatttgg cggctgtctg aatgcaacaa
     4801 acgccctgcc gcgtttgcac acgacagggt cgggatgccg gtttcagcca aaggggttaa
     4861 cttgctgaac ataaaacaat ctcgttgata ctcggattaa gacggtgttt tgacggctgc
     4921 ggcggtcagt ggcttggtcg gggaaatgcc caagatgttc aggctgccgc ccataatttt
     4981 tttgaagggc ggccctgcca ctacgccgcc gtaataaccg tgggcagtcg gttcgtcaat
     5041 ggttaccgcc acaatcacac ggggattttt ggcgggggca aaaccgataa aggtagcgat
     5101 gtgtttgttg tcggcataac gcccgttgac gaacttgcgc gccgtgccgg ttttcgcgcc
     5161 gacatcgaaa ccgtccaccg cacccgccgt accggtgccg cccggctcgg ttacggaaac
     5221 catcagattg cgtacctcgc gcgcggtcga ttctttgaat atgcgtttgc cttgcggcgc
     5281 aaccgcctgt ttttcaaagc tgaccggcag taaaacgccg tcgtgcgtca gtgcggtata
     5341 ggcgcgcgcc aattgcagca ggctcaattg caggccgtaa ccgaaagaca tcgtcgcctg
     5401 ttcgataggc cgccacctgc gccaatttct caacaaacct gcagtttcgc ccggaaagcc
     5461 cgagtgcata cgcacaccga tgcccaactc atgatagaag tcatacattt cttcgacgcc
     5521 gaaacgcgca gacagtttgc ttgtgccgac gttggacgat ttctgcatga tgccgcgcac
     5581 atccaaagag gggtaaacat gggtatcgcg cacgggagac ggtccgattt tataaggctg
     5641 cgtattcagc cgttcgttca aatcggtttt gcccgcatcc aatgccttcg caatcacaaa
     5701 cggtttgatt gccgaaccgg gttcgatcat atcggttacg gcacggttac gccgctgttc
     5761 gctgtctgcc cggccgggcc tgttgggatc gtaggcgggc gtattggcca aggcgaggat
     5821 ttcccccgtg cgggcatcca aaaccaccac cgttccggct tttgcctgat ggtattcgac
     5881 cgccttgttc aactcttcat aggccaaggt ctgaatcctc tgatcgaggg aaaggatgat
     5941 gtctttgccg tttttcgggg ctttattgcg cggggagtcc aagctgtcca caatattgcc
     6001 ctgccggtcc cgcaaaacga cttccgcgcc gtcttcgcca tgcaggctgt cttcaagcga
     6061 aagttccaaa ccttcctgac ctttgccgtc aatatcggta aatccgatga cgtgtgcaaa
     6121 caggttgccc atcgggtaat ggcgttttaa ttctttttca aatacaaagt tttccaaacc
     6181 caaggctttg acctcttcgg caaccttggg atcgagctgc cgcttaatcc agataaacga
     6241 cttgcctttc tgttcgagct tgttcctcaa aacatcaacc ggcacatcga caagctcgga
     6301 caggcgttcc aattgtgcgg cagacggcat ttccttcatc tctttaggca cggcaaacag
     6361 ggactccgtc ggcgcactca acgccaaaac cgcaccgttc cggtccgaaa ccgtaccgcg
     6421 tgtagccggc aatgtttgag tccgcacaat ccggttgtcg ccctgttctt tcaaaaagtt
     6481 atacgttacc gtctgcagat acagtccgcg agcaatcaga ccggcaaaca agaccgctat
     6541 tgccatcagg acgaagctga tccgtccgtt actggtcatc ggctttttga cctgctcttc
     6601 tttgggcagc atccgaggct tatattcgct cttaatcaac atttttactt ctcgttatta
     6661 ttatcctgac gcaggaatcc gattccggca cacaggctgc ttctatcttt gatgcgccac
     6721 cataaaggta ttgcccgaaa ccggcggatg gaggttttgt ttttctgccg ccgccctgat
     6781 cgcttcgtgg ttcgccaaac gcgcctgttg cagcctcatt tgcgcataat cctgctccaa
     6841 ggcgatttcc tgttttttcg ccttgtccaa agctgtgaag ttgagcctgt actggttttg
     6901 ctgcatcaca acggaaaaag cggaaacgca caccgcaagc agcagaagga aattcaattt
     6961 gttcattgcc attcagacgt ttttctctgt gattgttccg gtatcgaacc ggcagtccgc
     7021 tccgccacac gcaaaaccgc acttctcgcc ctcggattgg cggcaatttc cgcctcaccc
     7081 ggctttaatg ccctgcccac gattttcagg ggcagctcgg gcaaatccgc ttccctgacc
     7141 gccgcccaac gcggcagggg cgcgtgttgc gaatattttt tgacaaactg cttcacaatg
     7201 cggtcttcca acgaatggaa agcaatgacc gccaaacgtc cgccctcttt cagacgacac
     7261 atgacctgcg gcaatactgc ccctacttct tcaagctcgc ggttaataaa gatgcggacc
     7321 gcctggaagg tgcgcgtcgc aggatcctgc ccccgctcgc gagtacggac gttttgtgcc
     7381 acgatctgcg ccagcttgcg ggttgtatcg attggacttt ccgcccgttg cgcaacaatg
     7441 gcgcgcgcaa tctggcggct aaaccgctct tcaccataat tcttgattac ctcgtgcaaa
     7501 tcctgttccg acgcaaccgc tatccactct gcggcagaca taccgcgcgt cgtatccata
     7561 cgcatatcca aaggggcatc gaaacggaag ctgaaaccgc ggctgccgtc atcgatttgc
     7621 ggggacgaaa tccccaaatc aaacagcgca ccgtccacct tgccgatacc caaaccgtcc
     7681 aatgccgtct gaaacgaagc aaaaccgcca tgcacgacac cgacccgttt gtccgaacgc
     7741 gccagctctt ctgccacagc aatcgcctga gggtctttgt cgaaaacaat caaccgcccc
     7801 gcatcgccca aacgcgacaa aatcagccgg gaatgccctc ccctgccgaa cgtaccgtcc
     7861 acatagacac cgtcttcgcg cacggcaagc gcatccaccg cctcatccag caagaccgtg
     7921 atatgccggt aactttctgc tccactcaca attgcaaatc cgtctgactc aactggaagg
     7981 caagttcgtc aggatcgtca tccaaagcct gaaccatttc ggcctcccac tgctcacgac
     8041 cccaaagctc caaacggttg gcacgaccga ccaaaacgac ttcacggtcg aaatccaccc
     8101 ttttcctcag tccggcagga agcagcaccc ggccggcgct gtcccattct aaaatttccg
     8161 cgttatgcag caaaagattt tgaaaccgcc gcaaaacagg gttatccgcc acttttaagt
     8221 ttaaaagttg cgccgcaacc ttttcccact ccgcaacagg gtacatcaac agcttgtgtt
     8281 tcgactcgag cgttaccact acggcaggcg tatagaggcg cgacagaatg tcacggaatt
     8341 tggcaggaac agccaaccgc cccttactgt cgatgcttaa ttcgtgtgcg ccgccgaaca
     8401 tgacatgtcc caagccgaaa tcaaaatcac aagggtaaaa gagacacttt gccccacaat
     8461 tccccaccaa tcgacactat aagaaatttt aaacactcgg tcaaatcagg gcatgaaaac
     8521 tcattaacat atctgaaatt tttattcctt ttaaaaacaa taagataaaa aatgacgaca
     8581 acggcacggc gggtgcggta cagagtgacc gaaccaataa acaactatat atgattaatt
     8641 taataatata aacacaatat atagtattaa gataaagcca tgacagcacc cgtaccaacg
     8701 tgtaatatgt cgggaaatcc aataaattta cacaagctaa cacttatcat gcccctccct
     8761 ctcccctctc ccgaagcacg gcaatcctcg ctcaaactgc aaaccctcat tgccgaaaaa
     8821 atcggcaaac acggcaactg gattccattt tcacgtttta tggaattggt tttatacgct
     8881 ccgcaatacg gctactacac cggcggcagc cataaaatcg gcaataccgg ggattttatt
     8941 actgcaccga ccctcacctc tctgtttgca cagacactgg cacgccaact tcaagaactt
     9001 ctatcccaaa cggcgggcaa tatctatgaa ttcggcgcgg gaaccggaca gcttgccgcc
     9061 gatttgttgg gcagcatttc ggacggcatc agccgttact atattattga aatatcgccg
     9121 gagctggcag cacgtcagaa aaacctgatt caagcacgcg caccggaagc atctcaaaaa
     9181 gttgtccact tgaccgcact tcccgaagcg tttgacggca tcatcatcgg caacgaagta
     9241 ctcgatgcca tgcctgtcga aatcgtccgt aaaaatgaag gcggctcatt cgagcatgtc
     9301 ggcgtttgcc tagataatga ccgttttacc tattcggcac gaccgctgca cgacttacag
     9361 ctatctgcct tggcttccct ctattttcct caaacagatt atccctacac cagcgaacta
     9421 catccgcaac aatatgcctt tatccgcacc cttgcctcaa ggcttgaacg cggaggtatg
     9481 atattcatcg actacggttt tgatgcagcg cagtattacc accctcaacg caatcaaggt
     9541 actctgatcg gacactaccg acatcacgtt atccacaatc cttttgactt catcgggttg
     9601 gccgacctga ccgcgcatgt caactttacc gacattgccc aagccgggac ggatgccgga
     9661 ttagatttga taggttacct tccccaatcc catttcttat tgaacctggg cattaccgag
     9721 ctattggcac agacggggaa aacggattcg gcagcctata tccgtgaagc tgctgccgtt
     9781 cagaaactga ttgaccagca tgaaatgggc gaactgttta aagtcatcgc attcggaaaa
     9841 aatatcggca tcgactgggc aggattccgc ttcggcgaca tctgccacaa actctaaccc
     9901 tcatgccgtc ttaaccattt tcagacggca taaaattttt aatatttaaa aacaggacac
     9961 taatttaaaa ttagaaaata cggcttgtca aaaaaacaaa aaaacatata atagcgactt
    10021 cacgaaacgg cgaattagct cagtcggtta gagcagagga atcataatcc ttgtgtccgg
    10081 ggttcgagtc cctgattcgc caccagattt ttgggggtat agctcagttg gtagagcgct
    10141 tgcatggcat gcaagaggtc agcggttcga tcccgcttac ctccaccaga taaaaaagca
    10201 cagaccgtaa aaaggtatgt gcttttttat tacctgatta ccggaaaata aagaacaaac
    10261 cactgcattc aaaacaggca atcgacttta aacctattgc cccgcctgtc ctgattttat
    10321 cagcccgcca aacaaacccg gtccgaataa tgtcttcagg ccgggtttat ggtttcattc
    10381 ccaacttatc cagcccgaca accacaatat tatgatgaca atgccaaaaa caatgcggta
    10441 ataggcaaat gggatatagt ttttcttgga gacaaacttc agcagtgctt tgaccgctac
    10501 caaaccggaa acaaaagcgg caataaagcc tatcagaatc aaaccgacat catgcagggt
    10561 gaaaaaccgg taatgcttca ggacatcata agccgttgct gcaaccatca tcggaacggc
    10621 caagaaaaat gaaaactccg ttgccgtttt ccgctcgatt ccccaaagca tcccgcccat
    10681 aatcgtactg cccgaacggg acgtacctgg aaccagtgca aacacttggg caacgccgat
    10741 catcaacgca tcaatcggac gcaatgcatc aacatcgaca attttaggct ctgctcggct
    10801 ttggcgtttc tccacccaca aaataaaaaa accgcccaaa accagcatga ctgcaacact
    10861 caaggggtta aacagatact ctttgatttg tttgccgaac aacagcccca tcacggcggc
    10921 aggtataaaa gcaatggcaa gattaaggac gaaacggttg gctttccggt cttttcccac
    10981 gccatgcaac acattgctga aacgctgccg gtattcaaac actaccgcca aaaccgcacc
    11041 gagctggatg gtaatttcaa aaaccttgtg attgctgtga aaatcaatca gattgccgaa
    11101 cacaatcaaa tgtccggtgc tggaaatcgg taaaaattcg gtaaaacctt ctaccaagcc
    11161 catcatcagg gctttcagga caatcagaaa atccattgct tgcgcttctt tcggatacgg
    11221 gagttcggct atttctgtac agcaggggtc tgacgcttgc gttcttccct gactttggca
    11281 accaattctt taatcgtatg aacgccgccg tcaaagccat tattgaagat aacgcggtat
    11341 tttccgccga caataacggt cggcgtgctg tcaataccgt attgttccgt cagtttctgc
    11401 atttttaatg cggcggcggc agcttcgggg gaatcatagg cgcgcatcag ttttttgccg
    11461 tcaaagcctt tttgagacaa agcccatttt tcggcaaccg acctgttttc caagcggatt
    11521 ttttgttcgt aaactgcttt aaacacggca gggtttgcct gatatttcaa acctgacagc
    11581 ttgaccgcag cagccattct tgccagaccg agcatttcag gctgccagac cacgtgctcc
    11641 gtccttaaat aggcatcaga cggcaatgcc ttgcccaatt tcaataacaa aggatcgaaa
    11701 tgatggcaat gtacgcagaa atagccgaaa aattccaaaa cctcaatttt gcccgactgt
    11761 ttttgaggaa tgggtttatc caacacaaga tagtcttccc cttccgtcag ggcatatgcc
    11821 tgcgcggaca acactgccga cagcagcagc ggcagatgtt tgagcttcat aattatttgc
    11881 tttcgataga acggatcagg ctggcgactt catgtttttt caactcgtcc tgcatttttt
    11941 tcaccgcatc ggcagacata ttgccgcttt gcacccggta aagcgtttta tgtcccgcct
    12001 gataaccgac caccttggaa gatatgccca agattgccag tttggcacgc tgcccttccg
    12061 cgctccggcg gtcggcatac gcgcccattt gcagataatg cgttgcttcc gccttgtcgg
    12121 gcgttttcat tttctgcact tctttggcag cggcactgcg cgctttttcg atgctgccgc
    12181 tgttgaggat ttgttccggg gtcggtttgg gtgcaacttt ttccttctcc gcctttttct
    12241 cttcttttga agcttttttc tctgtttctt tagatggttt taccgcttgt tttttaaccg
    12301 tttcggcatc tttcttctgc gctttttccc cgacggtttg ttcacgctct tccgtcagtg
    12361 ctttcttgcg cactgcctgt ccgtccgact tttcccgctc cggctcgtcc gccttttcct
    12421 caacctcgtc ggctttgtcg gcaacgggct gcttgtcggc agctttttcc gcatccgact
    12481 gctctgcctc tttcgcagca tccggttcgg acaaggcgtt ttgatcggcc ggttcaggtt
    12541 ggatgtcttc cttaggctgg tttttcggtt tcaggatttc cgtttctgca ggctgcttcg
    12601 acggaaccgg gattttgaac gcattttgac cgctctggtt cagataaaac aaaataccgg
    12661 caataatgac cgtcgccagt atcaaaccga agaaaaaacc ggacagacct tttccggatt
    12721 gggaaaattt gttcataaac ataccttaat gtgtttcaga cggcattaac gccgtttgct
    12781 tacgggcgga tattctaaca atatcgccat atttgggcaa aacctgcttc cattcccatt
    12841 cctataaagc gcgacggaaa cctatggctt tcatgacgtg gcttctgccg acttcttcgt
    12901 cgcccgccaa atccgccaat gtacgcgcca cgcgcataat gcggtggaag ctgcgggcgg
    12961 aaagggagag tttttccatc aggccgccca atgcttcctg cgcttctttt tgaatgcggg
    13021 cttgggaatc gagttcgctg acgctcaaag cggcgttgac tttgccctgc cgtgcgtatt
    13081 gtttgtcgcg ggcggcgata acgcgttcca aaacggacgc gctgctttcg cccgcttcct
    13141 gctgcatcag ttcggcggcg gacaggctgg ggacttcgat ggtcaaatcg atgcggtcga
    13201 gcagcggccc ggaaatcttg ctgcggtaac gcgcgacgct ttcgggcgtg cagcggcagg
    13261 gtttgacggg atgcccgaga taaccgcacg gacacgggtt catggcggcg acaagttgga
    13321 atttggcagg atagacggct tggcgcgccg cgcgggaaat gtggatttcg ccgttttcca
    13381 acggttcgcg caaaacttcc aaaactttgc ggtcgaactc gggcaattcg tccaaaaaca
    13441 aaacaccgtg atgcgccaat gaaatctcgc ccggacgcgg atccgaaccg ccgccgacca
    13501 tagccgccgc gctggcgctg tgatgcggac tgcggaaagg acggttgctg tcgagttgtt
    13561 gctggtggtt gggcaggagc gaacgcaatg cccaaacttc aaccaattcg tcttcggtca
    13621 gcggcggcag gatgccgggc agccgttggg agagcataga cttgcccgtt cccggcggac
    13681 ccatcatcaa gaggctgtgt ccgcctgcgg cagcgatttc caaagcaagg cgggcagtgt
    13741 gctgaccctt gacatcgacg aggtcgagca atttggtgtt ttcagacggc atctgaggaa
    13801 cttgacagtc ggtttgcacc aaaggttcga tgccgttcaa atgggcggcg acttcgccca
    13861 aagagcgcgc gccgtaaacg gtaatgccgc gcatcacggc ggcttgtcct gcgttttctt
    13921 caggcaaaac aaatgcacgt tttgcctgca taccctgcca cgccatcgcc aacgcgccgc
    13981 gcacggggtg caacagcccc gacagtgcca attcccccgc aaactcgtat tccgccagtt
    14041 tttcgggcgc aacctgcccc gatgcggcaa ggatgccgat tgcaatcggc aaatcgaaac
    14101 gccccgactc tttgggcagg tcggcggggg cgaggttgac ggtaattttt ttggcgggga
    14161 attcaaaacc gctttgaata atggcggcac ggacgcggtc gcgactttcc tttacttccg
    14221 tatcgggcag cccgacgatg ttgaaatgcg gcaggccgtt ggcaaggtgg gcttccactt
    14281 cgaccaacgg cgcattcata ccgctcaagg cgcggctgta aaccaaggca agcgacatat
    14341 ttcagacggc cttattcgcc ggcttcggtt tgctgcctga tttcggcgac ggcttcttcg
    14401 gcagcggctt cagccgcttc caatgctgcc cgttcgggat tttgcgcggc ttcgagtttt
    14461 gccaaacgcg cttccaaagc cgccagtttg gtacgagttt tgattaaaac ctgctgctgg
    14521 atgtcgaatt cttcgcgcgt aaccagatcc atacggttga acgcgccgcc cagcatcgcc
    14581 ttaatatttt tttccacatc tttggcaggg ctgttggcga tggtttcgct gattttcgaa
    14641 ccgacttctt caaaaagctg cttgccgaac ataatctgta tccttcctga acatatcaaa
    14701 ttcaatcggc tattgtataa ggaaaaatgc cgtctgaaaa cgggcggcgg ataatcggca
    14761 aaacataccg cgcccccttt gcggttgcta aattacacct caaaacacct gccgcctgaa
    14821 aacggatttc atattccgcg caacgccaga ttacaagaca ctacaaaaca atatactgtt
    14881 ttaaatgatt tttccgacgc gcatcgtttc aaactcggct ttttaagcca ttaagtgctt
    14941 tgcaaacaac agaaattggg ttatgctgaa acggattatt tacaatttca tatagtttta
    15001 ttacatatct tattgtgatt gaagataatt tatccgaatc cccctttcgg gtatccggat
    15061 tttccgttgt acttttattt agaaaaacat ttcaggcgca agttgcttgc aatttcaaag
    15121 cctgtaattc tgaagtttta gacgaggaat agcacatgaa tcccatgtac attacttttg
    15181 caatctatct ggttgcagtc cttctcatcg ggcttgccgc ctatttttct acgcgcaatt
    15241 tcgacgatta tattttgggc gggcgcagcc tgggcccgtt tgttaccgcg atgtcggcag
    15301 gcgcgtccga tatgtccggc tggctgctga tgggtctgcc gggcgcgatt tacctgagcg
    15361 gtttgaatga ggcttggatt gccatcggcc tcttggtcgg cgcgtatttc aactggctct
    15421 tggtggcggg ccgcctgcgc gtgcataccg aatacgccaa caatgcgctg acgctgccgg
    15481 attatttctt ccaccgcttc ggcgcgggcg gacacttgat gaaagtggtt tccgcactga
    15541 ttatcctgtt cttcttcacg atttattgcg cctcgggcat tgtggcgggc gcaaccctgt
    15601 tccaaagcct gtttgaaggt atgacttaca atcaggcaat gtggctgggc gcgggcgcga
    15661 ccatcgccta taccttcttg ggcggtttct tggcggtcag ctggacggat acgctgcagg
    15721 cttctttgat gattttcgcc ctgattttaa cgccggtgat ggtctatctg ggcttgggcg
    15781 gcgcggaaca gatgtctgcc gcgattcaaa gcgtcgccgc aggcacgggc aaagaatacg
    15841 gcagcctgtt tgccggtacg accgtcatcg gcatcatttc caccgccgca tggggcttgg
    15901 gctatttcgg acagccgcac attttggcgc gctttatggc ggccgaaagc gcgaaatcgc
    15961 tggtatccgc acgccgcatc ggcatgactt ggatggcgtt gtgccttgcg ggcgcggtag
    16021 cggtcggtta tttcggcatt gcgtatttcg gtgcaaatcc cgacaaagtt tcttctatga
    16081 gcggcaacca cgaacgcatc ttcatcgcgc tttccaccct gctgttcaac ccttggatcg
    16141 ccggcattat tttgagcgcg attttggcgg cggtgatgtc caccctgtcc tgccagcttt
    16201 tggtttgctc cagcgcgatt accgaagact tctacaaagg ctttttgcgt aaaaacgcgc
    16261 aacagtcgga actggtatgg gtcggccgcc tgatggtctt ggcgattgcc gtgatttcca
    16321 tcctgattgc ttccgatccg aacagcaaag tattgggact ggtctcttat gcgtgggcag
    16381 gtttcggtgc ggcattcggc ccgattgtga ttctgtccgt attgtggaaa cgcatcactg
    16441 cctacggcgc gttgtcgggt atggttgcag gtgccttaac cgtggtcgta tgggcggaat
    16501 gggtgaaaaa accggctcaa gcggcaggcg aaagcggctt gttgacgatg tacgaaatcg
    16561 tcccgggctt tattgtttgc ttgatcgttg ccgtgttggt ttccctgttc aacaaagaac
    16621 cttcgcgcga aacccaagaa cgctttgaaa aagccgacgc agattaccgc gccgcccgat
    16681 aaaccccttt cagacggcac ggcatcctgg ttcgtgccgt ctgaacccgt ttccgggtaa
    16741 aacacaaata aaccttgcct gcatacagac cttatttgtg ttttacccgt ttcattttca
    16801 aagaaacgga agcacctacc ctgcccgcat ttgaagcctt gtatttcatc tgcggattta
    16861 ttacgatatt accgtattca ggccgcaccg atgccgcctg ccccccgaaa aactttggag
    16921 aatccaaaaa atgtttcatt ttgcatttcc ggcacaaact gccctgcgcc aagcgataac
    16981 cgatgcctac cgccgtaatg aaatcgaagc cgtacaggat atgttgcaac gtgcacagat
    17041 gagcgacgaa gagcgcaacg ccgcctccga gcttgcccgc cgtttggtta cccaagtccg
    17101 cgccggccgc accaaagccg gcggcgtgga tgcgctgatg cacgagtttt cactctccag
    17161 cgaagaaggc atcgcgctga tgtgtctggc agaagccctg ctgcgtatcc ccgacaacgc
    17221 cacgcgcgac cgcctgattg ccgacaagat ttcagacggc aactggaaaa gccatttgaa
    17281 caacagccct tccctcttcg tcaacgccgc cgcctggggc ctgctgatta ccggcaaact
    17341 gaccgccaca aacgacagac aaatgagttc cgcactcagc cgcctgatca gcaaaggcgg
    17401 cgcaccgctc atccgccaag gcgtaaatta cgccatgcgc ctgttgggca aacagttcgt
    17461 caccggacag accattgaag aagccctgca aaacggcaaa gaacgcgaaa aaatgggcta
    17521 ccgcttctcc ttcgatatgt tgggcgaagc cgcctacacc caagccgatg ccgaccgcta
    17581 ctaccgcgac tatgtcgaag ccatccacgc catcggcaaa gatgcggcag gacaaggcgt
    17641 ttacgaaggc aacggcattt ccgtcaaact ctccgccatc catccgcgct actcgcgcgc
    17701 ccaacacggc cgtgtgatgg gcgaactgtt gccgcgcctg aaagagctgt tccttttggg
    17761 taaaaaatac gatatcggta tcaacatcga tgccgaagaa gccaaccgtc tggagctgtc
    17821 tttggatttg atggaggcac tcgtttccga tcccgatttg gcaggctaca aaggcatcgg
    17881 tttcgttgtc caagcctacc aaaaacgttg tccgttcgtt atcgactacc tgatcgacct
    17941 tgcccgccgc aacaaccaaa aactaatgat ccgcctcgtc aaaggcgcgt attgggacag
    18001 cgaaatcaaa tgggcgcaag tggacggctt gaacggctat ccgacctaca cccgcaaagt
    18061 ccacaccgac atctcctacc tcgcctgcgc gcgcaaactg ctttccgcgc aagacgcggt
    18121 atttccgcaa ttcgccaccc acaacgccta caccttgggc gcaatctacc aaatgggcaa
    18181 aggcaaagac tttgaacacc aatgtctgca cggcatgggc gaaaccctgt acgaccaagt
    18241 cgtcggcccg caaaacttag gccgccgcgt gcgcgtgtac gccccggtcg gcacacacga
    18301 aaccctgctc gcctacttgg tgcgccgcct gttggaaaac ggcgcgaact cgtctttcgt
    18361 caaccaaatc gtcgatgaaa acatcagcat cgacacgctc atccgcagcc cgttcgacac
    18421 catcgccgaa caaggcatcc acctgcacaa cgccctgccg ctgccgcgcg atttgtacgg
    18481 caaatgccgt ctgaactcgc aaggcgtgga cttgagcaac gaaaacgtat tgcagcagct
    18541 tcaagaacag atgaacaaag ccgccgcgca agacttccac gccgcatcca tcgtcaacgg
    18601 caaagcccgc gatgtcggcg aagcgcaacc gattaaaaac cctgccgacc acgacgacat
    18661 cgtcggcaca gtcagctttg ccgatgccgc gcttgcccaa gaagcggttg gtgcagccgt
    18721 tgccgcgttc cccgaatgga gtgcgacacc tgccgccgaa cgcgccgcct gcctgcgccg
    18781 tttcgccgac ctgctcgaac agcacacccc agcactgatg atgcttgccg tgcgcgaagc
    18841 aggcaaaacg ctgaacaacg ccattgccga agtgcgcgaa gccgtcgatt tctgccgcta
    18901 ctacgcaaac gaagccgaac ataccctgcc tcaagacgca aaagccgtcg gcgcgattgt
    18961 cgccatcagc ccgtggaact tcccgctcgc catctttacc ggcgaagtcg tttccgcatt
    19021 ggcggcaggc aacaccgtca tcgccaaacc cgccgaacaa accagcctga ttgccggtta
    19081 tgccgtttcc ctcatgcacg aagccggcat cccgacttcc gccctgcaac tcgtcctcgg
    19141 cgcaggcgac gtgggtgcgg cattgaccaa cgatgcccgc atcggcggcg taattttcac
    19201 cggctcgacc gaagtggcgc gcctgatcaa caaagccctt gccaaacgca acgacaatcc
    19261 cgtcctgatt gccgaaaccg gcggacaaaa cgccatgatt gtcgattcca ccgcacttgc
    19321 cgaacaagtc tgcgccgacg tattgaactc cgccttcgac agcgcgggac aacgctgctc
    19381 cgccctgcgt atcttgtgcg tccaagaaga cgttgccgac cgtatgctcg acatgatcaa
    19441 aggcgcgatg gacgaactcg tcgtcggcaa accgattcaa ctcaccaccg atgtcggccc
    19501 cgtcatcgat gccgaagcgc agcaaaacct gttgaaccac atcaacaaaa tgaaaggtgt
    19561 tgccaagtcc taccacgaag tcaaaaccgc cgccgatgtc gattccaaaa aatccacgtt
    19621 cgttcgcccc atcctgtttg aattgaacaa cctcaacgaa ctgcaacgcg aagtcttcgg
    19681 ccccgtcctg cacgtcgtcc gctaccgcgc cgacgaactc gacagcgtca tcgaccaaat
    19741 caacagcaaa ggctacgccc tgacccacgg cgtacacagc cgcatcgaag gcacggtacg
    19801 ccacatccgc agccgcatcg aagccggcaa cgtttacgtc aaccgcaaca tcgtcggcgc
    19861 agtcgtcggc gtacagccct tcggcggaca cggtctgtcc ggcacaggtc ccaaagcagg
    19921 cggttcattc tacctgcaaa aactgacccg cgccggcgaa tgggttgccc cgaccctgag
    19981 ccaaatcgga caggcggacg aagccgcact caaacgcctc gaagcactgg ttcacaaact
    20041 gccgttcaac gccgaagaga aaaaagccgc agcggccgct ttgggacacg cccgcatccg
    20101 caccctgcgc cgtgccgaaa ccgtccttac cggaccgacc ggcgagcgca acagcatctc
    20161 atggcacgcg cccaaacgcg tttggataca cggcggcagc acggttcaag cctttgccgc
    20221 actgaccgaa cttgccgcct ccggcataca ggcagtggtc gaacccgaca gccccttggc
    20281 ttcctacact gccgacttgg aaggtctgct gctggtcaac ggcaaacccg aaaccgtcgg
    20341 catcagccac gttgccgccc tgtcgccttt gaacagcgcg cgtaaacagg aacttgccgc
    20401 ccacgacggc gcactcatcc gcatcctccc ttcggaaaac ggactcgaca tcctgcaagt
    20461 gtttgaagaa atctcttgca gcgtcaacac cacagccgcc ggcggcaacg ccagcctgat
    20521 ggcggtcgcc gactgatttt accgaaatcc ccgggcgcgg cccgtgaacc aatgccgtct
    20581 gaaaaccttt cagacggcat ttttata
//
LOCUS       DAXHRP010000018        20220 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.018, whole genome shotgun sequence.
ACCESSION   DAXHRP010000018 DAXHRP010000000
VERSION     DAXHRP010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20220
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.018"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(203..278)
                     /locus_tag="ACFM72_000523"
     tRNA            complement(203..278)
                     /locus_tag="ACFM72_000523"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(243..245),aa:Asn,seq:gtt)
     gene            complement(371..730)
                     /locus_tag="ACFM72_000524"
     CDS             complement(371..730)
                     /locus_tag="ACFM72_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HFC6257137.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(753..1397)
                     /locus_tag="ACFM72_000525"
     CDS             complement(753..1397)
                     /locus_tag="ACFM72_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HFC6257138.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1399..1935)
                     /locus_tag="ACFM72_000526"
     CDS             complement(1399..1935)
                     /locus_tag="ACFM72_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HFC6257139.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1947..3044)
                     /locus_tag="ACFM72_000527"
     CDS             complement(1947..3044)
                     /locus_tag="ACFM72_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC6257140.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3047..4483)
                     /locus_tag="ACFM72_000528"
     CDS             complement(3047..4483)
                     /locus_tag="ACFM72_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC6257141.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQYADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACFM72_000529"
     CDS             complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACFM72_000529"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HFC6257142.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVHLTYHPLFFIARYSAAGRQ"
     gene            complement(5473..6120)
                     /locus_tag="ACFM72_000530"
     CDS             complement(5473..6120)
                     /locus_tag="ACFM72_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HFC6257143.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTGNTRLKFERRMCGDKASFEDYQQFSARPFDEIHQELTALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQYRYWTARCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACFM72_000531"
     CDS             complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACFM72_000531"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HFC6257144.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAVYL"
     gene            complement(7294..7431)
                     /locus_tag="ACFM72_000532"
     CDS             complement(7294..7431)
                     /locus_tag="ACFM72_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HFC6257145.1"
                     /translation="MATETNVAEISALDYEGRGVAKVGGKTVFIKRALLDCLMLGWFR
                     L"
     gene            7495..8571
                     /locus_tag="ACFM72_000533"
     CDS             7495..8571
                     /locus_tag="ACFM72_000533"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HFC6257146.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDTASLKKSIGQ
                     WAKTQGKTIASDKIDAVLKARTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8778..10244)
                     /locus_tag="ACFM72_000534"
     CDS             complement(8778..10244)
                     /locus_tag="ACFM72_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC6257147.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVVAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10442..11365)
                     /gene="speB"
                     /locus_tag="ACFM72_000535"
     CDS             complement(10442..11365)
                     /gene="speB"
                     /locus_tag="ACFM72_000535"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HFC6257148.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESQADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11464..13356)
                     /gene="speA"
                     /locus_tag="ACFM72_000536"
     CDS             complement(11464..13356)
                     /gene="speA"
                     /locus_tag="ACFM72_000536"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HFC6257149.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPAQHNQTASLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13523..13807)
                     /locus_tag="ACFM72_000537"
     CDS             complement(13523..13807)
                     /locus_tag="ACFM72_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC6257150.1"
                     /translation="MKKLLLAAVVSLSAATAFADDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="ACFM72_000538"
     CDS             complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="ACFM72_000538"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HFC6257151.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYAEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKVAETKEA"
     gene            complement(15824..16525)
                     /locus_tag="ACFM72_000539"
     CDS             complement(15824..16525)
                     /locus_tag="ACFM72_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HFC6257152.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPPEKADLPEQQ"
     gene            complement(16668..17816)
                     /locus_tag="ACFM72_000540"
     CDS             complement(16668..17816)
                     /locus_tag="ACFM72_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HFC6257153.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGRDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="ACFM72_000541"
     CDS             complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="ACFM72_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HFC6257154.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18542..19684
                     /locus_tag="ACFM72_000542"
     CDS             18542..19684
                     /locus_tag="ACFM72_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HFC6257155.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPNVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5222 a         5222 c         4665 g         5111 t
ORIGIN      
        1 caatgccgta ctggtttttg ttaatccact ataaaatcga gtttatccta gctgtccagg
       61 acagccccta ttttttcata accatcacga aaggaatttt gcaaagattt tattccatct
      121 caaaacaatc atctcaaaaa tgcgtttctg accgccggta aaacaaaacc ctctaagaaa
      181 atacttagag ggttttgaaa tttggctccc cgacctgggc tcgaaccagg gacctgcgga
      241 ttaacagtcc gtcgctctac cgactgagct atcggggaac aagcgcgaat aataaaacag
      301 aaataccgaa cgtgtcaata taaattgaca atcgattgca ctttatctgc aagcccgcaa
      361 tctttatatg ttatatggct tccgcaatat gccttgccgc acgtttggca tccaatagga
      421 ttaaaccaag tctgccggtt tcttttgcca ccagcaccaa cacggcatct ttacccgcct
      481 gacttaaaag gatatagcct gattttcctt taatcatcac ttgttccaat tccccgcagg
      541 cgagttcctg caccgagcga ctccccaaag caagcaaagt ggcagaaatc gcccctaccc
      601 tgtccgaatt caaatgtgaa ggaagcattg tcgccatcgg caatccgtcg gttgagataa
      661 cggcagacgc gataatatcc gtagatgtat tgtttaaatc ttcaaggatt gaaatcaata
      721 attgctgcat aacccctcct ctctcccaag ttttacacgc ggttgctgta acggcggtat
      781 aaaatcctta ccaaagtaac aaatgcctct ttgcccaaat cgggaatgcc gccgataacc
      841 aaaataaatt tggttgaacc gatatacaat gggaaaaatg tcaattcgct ctgaccggaa
      901 ggatcgcaaa cgccccaagc gttattgttg atatacaggt tgttcttaat cagcagccgg
      961 tatttctttt ccatctgtgc gacttctgcc gccaacaacc ccaactcttc cgccgcctca
     1021 tgatggaaat tggcgttggc aagatacaga ccgttccgat cgaccaataa cgccttaccg
     1081 ctgccggaca attgttccat cagcaacggc aattgctcgt ccgacaaatt gatgccgtct
     1141 gaatgaccgt tttcatcgcc atagaggaat tcgagttttt gcaaacggta caacaggttc
     1201 aaagcggtat cgatgtcggc ggtgtccgcc caggtaagca gcttctcact gctgaccatt
     1261 tcgtccgcat ccgctttcaa caggctgtgc aacaaagttt taccggcact gggggcatcg
     1321 ctggatacgg cataaaatgc accggcagga gtcaggcggg gatataaatt tgcttgtagt
     1381 gaaagtgttg attccatatt aaacctccag tcccggatca atagaaaata acattgcgct
     1441 aaccaattgt tttacgtcat cttccttacg ggcatcaatt tcaaaaaccg gaacattaag
     1501 attatgtttt gcaagatatt tgtgatacac gtcgataccg ggctgagagc gtatatccat
     1561 cttggtaata ccgacaacga cgggtgcctt ctccagcagc cctcgaaacg aatgtaaaaa
     1621 gaattccaaa tctttcaacg gattggttcg ggcattatct aaaagcaaga ccaaacccat
     1681 actgccttgg cttaagattt cccacataaa gttgaaccgt tcctgaccgg gcgtaccata
     1741 taaatggact ttggtatcct catccaagct gatggccccg tagtccatcg ccactgtcgt
     1801 attccttttc ctatccaaag tcatatcgga tgcggaagca tcggtctgaa cgagtgcttc
     1861 gtccgaaata gccgcaatgg cagtggtttt ccctacgccg acaggtcctg tgaaaataat
     1921 tttattttct ctcatctctc cgcctcttag ctgcccaaca gttttttcat cagcctttgc
     1981 agaaggccgc gcgactggga ttgggatggt gttgtgattt tttccgcttt tttcatcatt
     2041 tcactatcag aggcagaatc ggctccgata tttattttat ccgccatatc ggagtatgcc
     2101 tgttgtgaaa ccgtttttaa atctaccgac aaaaacccgg ttgtataggt tgccgcaaga
     2161 taattcagaa tatcattgag gtttaaaggc atcactttat acaacacgtt aaggttgacg
     2221 gatgccttgg tcagaaatgc cgacaagcgt atcgaccccg gcacatttgc caaccgggtc
     2281 aggtttggcc aagatttcaa cgtaaacgga gtatcgggag aaatcggata aatcaacctg
     2341 ccctgcgctg tccaaatgga aaactgccac atacaggaca taatgcctac tttagccttt
     2401 tcgcgccatt gcgggttatc gggaacagtc ttgcagctga cctgcaaatt ttcgtctttg
     2461 cacaattctt cgagtttttg cacactttct gtcagcaaaa cccgttgtat cgaggggaaa
     2521 acaataagga ccggcttatt tccatgcaag atagcgatgt cctgcctgtt cttttccgca
     2581 aaccgcaacg cccccaataa tcctttattc gggttaaact ggcgtatcgt aaccgtacgc
     2641 tgcacattcc cgttattttt cgccgaccgg tctgcgggtg caataaacga tttcccataa
     2701 acattctcgc cctgcaacaa tttgcggagc ataggaaaca atgtttcaaa ccgaatcggt
     2761 ttgggcaggt agggaacttc agaatcggga actttctccg aacagacggc gacgggtata
     2821 tccttataac gctcggcaag ctctttccaa agttcaaaac cgccctcggc atcggtatcc
     2881 gccaaaacca aatcgggcac ggcactgccg tctgaagggg atactgtttc ataacgggtg
     2941 gtattgtgca ttttgaatgc cattttgaaa acggattcct gctgcgccgt catccccgcc
     3001 aacattacgc gtactgtttt aattttcggc agttgaactt ccatttttat tttccgtacc
     3061 gttttatttt tttaatattt tgattcatac gctgcagcag ccggctcatc agcataacga
     3121 cctcttcagg aagcctgtcc gcacgttccc tcaataccct taaaaactgc cccaacctat
     3181 cccaatcttc agtacgttca taaatatcga tcaacgtaat ataaagctgg gactcgtcgg
     3241 gatatttcaa taccgcctgc tccaacacat ccattgccgc ttcaatctga ccatacatca
     3301 gcaacgactc tacttcctta accgcatcgt ctgccggaga cgaaccggtg ttgatcaacg
     3361 aagaatcttg aagcaccaaa tcccgatgtt gcgatttgaa tttctgtata tttttcggca
     3421 gatacccgtg ccccataccg atgtctttga tttgccggtc gttcggccct ttttccaaat
     3481 catcgaaaac ctcatggtaa cccaggctgt acccccaccc cagcatccgc tctttaacct
     3541 gcctgccgta gttgcccaac gtttggtaaa gtttccacaa atgtccggca aaacggtcta
     3601 tgtccgcgta ttggtaatcg agtttcaacg catcgataat caggtttgca ggtttttcgg
     3661 aagtttggat ggcacggtcg tattgtttcg atgccgtttc atagctgact ttgtctttaa
     3721 ggattttcgc accttgatcg gcacggacca aaccggcaat cgcaccgatt tcctcttgac
     3781 tgattccgga cacgtctttt ttgccccgca caatcgggat gcgcttgatt tcttcggctt
     3841 cataagcctt accgccggca tccggcgggg gcgatgcgga agctgccgtc gcagaaccgc
     3901 cttccgcacg tttttcaatc tcctgagtac cccatcccaa accttcttcc gccaagacgc
     3961 ggatacgcaa atggtttgaa tcgcgctgta atgcctgttc gatatatttt gccaaaagtt
     4021 cggaaggaat cagtttgccg tatttttgca gattgtctgc caaaacatcg acatccccca
     4081 cttcgagatt gatatcgagc agctcgcgga taaggttttc aggtttcgct tcaccatccg
     4141 gaatgccgtc cagataggca gccaaagatt cggcagcctt gccctgataa ccgaattgct
     4201 tataaacctg atactccgta agcggatcga cttcttgcgc ggatacggcg gcggatgcgg
     4261 tctcggcact ttcgttccaa gaccagtcgg gttgcgtgcc gtctgaaacc gattgtccaa
     4321 tctgatcgac ccagtccgaa tcattgcttc cgggtgtctg cccctgcgta ttgccgacac
     4381 cttgggattt gcgcttcggt gttttcttac cctgcttcgc acgcataacc aaaagcatca
     4441 gcaataccgc cagtgccaaa ccgataatta atgagttttc caaaggatac tcccgatacc
     4501 gtaacgagcg gatagctgac cgcctgcaac ggccattgtc cgcttttatt attaacgatt
     4561 tactgaaata gacttgtaag ttttaaatca taccataatt taacgtttaa caatatgcct
     4621 tctgcacaag cctcgccata ttacctttta cccacatcag tatcaatacc cgatataaaa
     4681 ataactttgc ccataagctg ccttattgcc tgcccgccgc agagtagcgc gcgataaaaa
     4741 ataacggatg ataagtcagg tgcactttgc ccgacggcat actgaacgcc gacaagtaat
     4801 cgccaataaa tccattgaga ttttttcttg tccaattttt ttggttcgtg gctgttacgc
     4861 ctgtatattt aaggtgtttg agtacatcta acggcgtatc aaagtctagt attaccttaa
     4921 aatcctcaca ccataaaagc tcaaaatctt tggctaacca agtctgccat tgggataaag
     4981 tcgggtaatt taagcctata tttgtaattt ggcggacttc ttttaaattg tctttgccaa
     5041 aggttgcaac cgccaataat ccgtttgctt tcaagcctgt tttgcaatga gcgataaaag
     5101 cgtcgggttg atgaaaccat tgcacggcag atgcgcttgc gattaagtca aattgtcgtt
     5161 gaaaaggaaa gttttccgca tcgccgcaat aaaaatcaaa ggattgcggc agtttttcag
     5221 ccagttgggg ctgcacatcg cacaaatcat taaataacca ataattcgct gaaatctgtt
     5281 tttgcagcaa ggcactcaac attcctgagc cgcagcccaa ttccaacacg ttttccaatg
     5341 gcatatccgg caaataatct tgcaaatgcg ccattagatt aatcgtcatt ttttgttgga
     5401 ttaaggcgtg ccggtcataa tcgtttaatg ctttttggaa agcctgccga atgcgcgatt
     5461 tatttatggc agtcagtgat tccatagtgc cgaccaatgg gtgaatcttg aaaacaggta
     5521 atgtccgccg tcaatttccc gaacggtgca acgcgctgtc caatatcggt actgattggc
     5581 aggcataaaa attttatcgc ccgatccgac caaggcattt gtccagcgaa tcaaatctgc
     5641 gcgcctatct tgcccgatca tcgcaaaaag tgcggtaagt tcttgatgaa tttcgtcaaa
     5701 cggacgggcg gaaaattgtt ggtaatcttc aaaagatgct ttatcgccac acattctgcg
     5761 ttcaaatttt aaacgagtat ttcccgtgag gttctccaat gtgcctttaa aaacggcgca
     5821 agggataccg aaattatcat cgcaaggcaa acctgtgcca ttcactgccg ttgcggattt
     5881 taatcttatt ccttgcaatg ccctctctgc cgcccaaacg cccattgacc acgccaccaa
     5941 gcggatgtgc cgataggcgg aaaaatcaaa atccaaattt aaatcttgat aatcatagca
     6001 aatcaataaa tcgtgatttt ccggcaaaat caaatgattt acagcatcgg gcggcgttcc
     6061 ccaacctgca aaatacagga ttaaatgtcc gccttgatga ttgtaaaatt ttgttttcat
     6121 atcatatcct tacaggtata ccgcaaactg ccgcacttca tccgttgtca tatctgccgt
     6181 taaagacaat cgtattctgg atgtgttttt gggtactgtc ggcggtctga tgggcaggca
     6241 ataataaccc tgcctttgca gatattccgc tttggcaagg gtggcttcat tcccgcctaa
     6301 aatatagggg acgatacagg tttggctcgg cattatttgc gtccgatgcg ccacttcccg
     6361 ccgtaaaaat gcgcttaact gctcaagatg gcttctttct tttgagaatt gcggcaatcg
     6421 ttcaaaaata aaataagtcc aagccacatt aaacggcggc aatgcggttg aaaaaatcaa
     6481 tgggcgcatt tgattaatca aacattcttt caatacttgg ttgcagacgg catacgcccc
     6541 caccgaggct aaggctttac cgaaagtgcc gaccaataaa tcaatctcgg caatcaaatt
     6601 atcccgttcg gcaatcccca atccgttttg cccataaaca ccgattgcgt gagcttcatc
     6661 cacataaaga taagtattgg gaaactgttt ttttaattgg acaagctgtt tcaaatccgc
     6721 cacatcgccg tccatactga aaacagattc ggtaacgata aaagtgcggt caaattttcc
     6781 gacgtttttt tcaagcagat ttttcaaatg ttcataatca ttatgacgat aacggaaaaa
     6841 cgcacaccgg ctcaaacgga tgccgtcaat catactggcg tgaacaaatt tatctgccaa
     6901 aatcaaactt ttcgtcgtcg tcaaagcagg caaaataccg agattggcgt gatagccgct
     6961 gttgaacaat aacgcgcttt cccgttggaa acgttgtgcg acaagctctt ccaaatcggt
     7021 ataaatagga aagttgcccg ttaataaacg cgatgaagaa ctggtaaaag agggaaaatt
     7081 accgccgtat tgctgcaaaa aagaccggcg caagttttca tctgatgcca aacccaaata
     7141 atcattagac gacatattca gcattttgcg gttttcccgc gtaatatacc gcccttgatg
     7201 aatcaaatcc ggaatcgaac gatattggtt ttgcgcgccg agttgttcaa gctgttgttt
     7261 aaaaaccttc attatgatgt aaatattcct gagttaaagc ctgaaccaac ccagcatcaa
     7321 acaatcaagt aatgcccttt taataaaaac cgttttgccg ccgacctttg ccacacccct
     7381 gccttcataa tccaaggcgg aaatttccgc gacatttgtt tccgttgcca ttacccaatc
     7441 cgtccgcact gtaccgaagc gcatattttc gcacaaattg gtacggtttc aggtatgatt
     7501 tgccgaaaac ctatcggaca cacaccatat tttgatatga ataaaacaat ctgccgcact
     7561 gctgcactat tgataagcgg tttttcatac gcaaacaccg tcattcccga tgtctccccc
     7621 gtcgcacaag gtcaacatgt cttcattaac atccctcagc aacgcctgtt cctctacacc
     7681 gacggcaaac tgaccaaggt ttatcccgtt gcagtaggtc gggcgatgac gcaaaccaat
     7741 ctaggcgaac ataaaatcgg tgcgaaagcc tataaccctg tttggtacat ccccaaatcc
     7801 atacagaaag aacgcggcga cggcgtaaaa accatagccg ccggcccgga caaccctttg
     7861 gggccggttt ttgtccgctt aggcgacccc aaactcggtt tgggcataca cgggaccaat
     7921 gcgccggcca gcgtccccgg ggttcggagt cacggctgcg tccgcatgaa atcgcccgac
     7981 gcgctcgagt ttgccaaaac catcgccagc ggctcgcccg cctccgtcat ctatcaaatg
     8041 gcgggtctca atgaagatgc ggatcgcaac ctgtggcttg ccgccttccg cgacccttac
     8101 ggtaagaaca accttgacac cgcctccctg aaaaaaagca tcgggcaatg ggcaaaaaca
     8161 cagggcaaaa ccatcgcatc cgataaaatc gatgccgtac ttaaagcacg taccggatcg
     8221 gccgtctgcc tgacctgcgg aaaaaacggc aagatgaaga tgccgctcaa atcgctggcg
     8281 tggatacagg gttcttcctc atacagccaa gctgaagtca ttgaacaaac tgaggaaacc
     8341 aactctgccg aaatatccga gacacgcacg cccgaagtgc ctgatgtaca cacgcccgag
     8401 gcacaaccgc atttaaatac ccaatccgac ggcacgccga ctgcctatac cgaaccggct
     8461 gccgattcat cgccgcaagt agaaacacct gatcaggctg cttccgagcc ggttgatgta
     8521 ttattttcaa tagatgtgat acggcaggga aatttgcgtt taggtaattg aataaccttc
     8581 tgattattta atgcttatgt ttatcagaag ttgataggcg gtttggtttt tgtttggctt
     8641 ttcctacacc gccgcctgcc gctttctgca acattcaagc gcacaaatat gccatctgaa
     8701 ggctttagac ggcatatttc acgataatag tcgcccaatc aaataaacac agattggaaa
     8761 tttattttat ttttccctta ccaatacccc agaactttcc accaaatgct gccgataacg
     8821 aaaaaaatca gaaaattgac tacgctcatg ataaaacccg ccttccacca ttctcccatt
     8881 gtggtgtagc ccgaaccgaa aatcacaggc gaagtaccgg tcgcataatg agtgagggtc
     8941 atcataatgt tggatgcggc cgccatcatc agcgcggtcg gcatcgccgg ggcattcagt
     9001 gaaacggcag cagcgagaaa tgcgccgaac atagcggtaa tatgtgcagt agtactggca
     9061 aacatataat gcgcatacat ataagcaagc acgaggatta cgcccgcagc cgtgccgcta
     9121 acgcccaaac cgccgacact ttccgccaac actccggaga accatttaat cagtccgagt
     9181 ttatttaaaa atgcggccat cataatcaat gcgccaaacc aaataatcgt atcccacgcg
     9241 cttttttctt tcaaaacatc gtcccaagtc aatacaccgg aaagcaaaag caggcttaat
     9301 ccgataaatg cggtggcggt ggcgttgata ctaaaagcgt gattgccggt aataagggcg
     9361 ggaacatctg cccacaacag caacaagata ccgaaaatga ccgccataat gatttcgtct
     9421 gccgacattt tacccatctc cctcagacgg tctttggcaa attgaacggc attgggcgtt
     9481 tctttaattt caggcggata caaaaaatat aaaatcaaag gcataacgaa aaaggcgaca
     9541 acgccgggaa cagccattgc ccacgcccac gccccccaag aaagacggaa actactgcct
     9601 aaattttcgg caatcaagtt gacgattaaa gggttggggg cagttgcagt aataaacata
     9661 gccgacgaaa tgggattgga atgatagttg accaaagcca aatatttacc catcttgcct
     9721 tctgtgcctt ttgcgggatt ggagccgtaa ctgccggcaa tcgactgcat aatcggatgt
     9781 ataatgccgc cgccgcgcgc ggtattggaa ggggtaacgg gagccagcag cagttcggaa
     9841 agagcgagac tgtaaccgat gcccagcgtt tttcttccaa aaacggcgat aaacaaatat
     9901 ccgatacgca tccccagccc tgttttgagc aaaccgcgcg aaatcataac tgcgatggca
     9961 atcagccaaa tcaacggatt ggcgaacgca ctcaacgcat cgctcatcgc cgcgcccggt
    10021 ttgtcggcgg ttacgccggt tactgcgacc aacccgacgg caataatcga cagcgcaccc
    10081 aacggcatgg ccttgccgat aatggcggca atcacaccga taaacatggc cagcagcgtc
    10141 caagcctgag gcttgacccc gtcgggtacg ggcagtgcca aaaccaaggc gcacaatact
    10201 gcggcaatgg cgaggggtat cggtttgaaa cccaatttca tcatattgac ctccgtaaaa
    10261 aagaccgtcc cgaaaaatcg gaaaaataat atttaactaa ttgttttata agatatattc
    10321 cgatatttca ccgtctttcc gatatgcggc tccgggcaac ttttgtttca gtatttgaat
    10381 tttcattaga ctgaatacgc cgtttgaacg gcacggcgaa aacccggggg atgccggacg
    10441 ttcagtcctt tttcgcacct tgaaggtaaa gcatttccaa ggcaattgtg gcgccggcca
    10501 aagcggtaat gtcggattgg tcgtaagagg gggcaacttc tacaacatcc ataccgacga
    10561 tgtcgagatc cgtcagccca cgtaggattt ttaatgccct gtcgctgctc aagccgccgc
    10621 atacgggcgt accggtccca ggggcgaacg acgggtccag gcagtcgatg tcgaaagtca
    10681 ggtaaacggg catattgccg acggtttctt tgattttacg gacggtctct tcaacactgt
    10741 cttcattgac tttaggggcg gacaacacag taaaaggcaa ttttttactg tgttcggtgc
    10801 gtatgccgat ttgtacggaa cgggacgggt cgatgaggcc ttccttgggg gcggtataga
    10861 acatcgtacc gtggtcgtat tcgctgccgt tgtcgtaggt gtcggtgtgc gcgtcaaaat
    10921 gaatcagtgc gagtttgccg aaatagcggg cgtgggcgcg caacaacggg agggtaatga
    10981 aatggtcgcc gcccaaactc aaacagcgtt tgccggaaga aagtaatttg ccggcgtgcg
    11041 cttccatttt ttcgacaaaa tccctgctgt cgccaaaaga aaaaaccaag tcgccgcaat
    11101 caataatgtt caggcgttcg cgcacatcaa atgtccatgg aaacctgcgg tgctcccaag
    11161 cgaggttgac ggaggcgcgc cggatggctt caggaccgaa acgcgcgccg gaacgccctg
    11221 aaaccgccat atcataaggc acgccggtaa tgacccaatc tgcttggctt tcatacggca
    11281 taaaattaag cggcaggcgc aaaaacccga aattattgga aacgagggag ttgtcggttt
    11341 gtcctgccag tgtgctgtat tgcatcgtaa tgattccttg taattggttt caatcggtcg
    11401 tgatgattgg tgtttgagta agaaaatcgg gcttcagacg acatatccga tgccttgatg
    11461 cgtctattcg tcttccaaat aggtataacc attaagcccc gcttcgagtt cttttaagaa
    11521 agacatagcc tgcgaggcag gaaggtctga atgttcgatt tgttcgcgat agcgtttcat
    11581 cagctctttc ggatcttgat aaacgtattc gagcatatcg gcaacggtgt ttccttcatc
    11641 gtaatcgatg acggtaaatt gtccgtcttc ccctacaaca acatcggcag tggcagtgtc
    11701 gccgaaaaga ttgtgcatat tgccgagtat ttcctgatat gctcccacca taaaaaagcc
    11761 taaaagcggc ggctcttctt cgggataatc aggcataggc atcgtaccgg cgatgccgtc
    11821 tccgtcgatg tagtggtcaa tcgtaccgtc tgaatcgcag gtaatgtcca acaacacggc
    11881 gcggcgcgca atcggttcat tcaaaccggt aatgggacaa acagggaaaa gttgatctat
    11941 gccccaagca tcgggcaaag attggaagag tgagaaattg acatacagct tatcggcaaa
    12001 acgttcttgc aattcgtcaa taatggttcg gtgagaccgg tgtttttcat taaacaattc
    12061 gccgacttca tgacagatat ttaaatacag ttgctccgcc cacgcacgtt gcgccaaact
    12121 caacagcccg acattatact gattatgcac atcagcaaga tcaaactgcc cttcgtgtat
    12181 ccagctgcgt aaggaacgtt tttcccgcga ggcggaaata tccgtccaag tttcccacat
    12241 actgtgcaac acacgcggtg cttcgggcga tggcgcatcc agccggcgcg gtttgtaacg
    12301 ttcaacgcct ataacattag caaccaaaac ggcgtgatgt gcggtaatgc cgcgcccgct
    12361 ctcggtgatg attgtcggat gcggcagccc gtgttcgaga caagcctgac tgatgcccca
    12421 tacgactgtg gcggcatatt cgttgaggct gtaattaacg gaacaatccg attgtgtgcg
    12481 gtttccttcg taatccacgc caagcccgcc gcctacatca aaacagcgga tatttacccc
    12541 cagtttgtgc aactcaacat aaaaccgagc cgattcgtgt acacctgtgg caacatcacg
    12601 gatgttccca agctgcgagc ccaaatggaa atgcaaaagc tgcaggcaat ccagcctgtt
    12661 tttttgtttc aaaatatcga ccagttgcaa aacttgggaa gccgacaagc cgaattttga
    12721 tttttcccca cccgaagact gccattttcc cgaaccttgg gaagccagtc tggcgcgcac
    12781 acccaaacgg ggcttgatgc cgagtttttc cgcctcttcc aataccattt gtatttcgga
    12841 cagcttctca atcaccaaat aaacctgatg ccccagtttt tcgcccatca aggcgaaacg
    12901 gatatattca cggtctttat agccgttgca gacgattaat gtttgccggg tgccggcgtg
    12961 tgccaaaacc gccatcagtt cggctttaga accagcttcc aaaccatgcg gttgtccgct
    13021 tgacataagc gattcgatga cgcggcggtg ttggttgacc ttgatagggt aaaccaaaca
    13081 ataaccgccc ttatagccgc actcttcccg tgccgtctga aaggcgcggt taatgtcgcg
    13141 gaggcggtgt tcgaggattt gcggaaaaca aaacaaaaca ggcaggcgcg cctgatgttt
    13201 ttgttgcacg gcttcagtca gtttttgcag tgaagcagtt tgattgtgtt gcgccggatt
    13261 ggggcggacg atgatttcgc cggaatcgtc aacatcataa taacctatgc cccaatgatt
    13321 aatgttgcac acttcacgga tggtaaggat aggcataata aacctgctcc gtctgtcgtg
    13381 ttgaaaagga atgattataa caaatcagcg tgaaatgtca tttttttaat aagaaaagcc
    13441 tgcctcatac ctgatgagga acaggcaaaa tgccgtctga acgcttcaga cggcattttg
    13501 gttcatcttt ccatcaaagg agtcagcgat cgagctgctc tttgatgatt ttcaggtcgg
    13561 ggtaagacaa cacgatgtcg tattcgcggc cgtctttata ggcttccact tccaaaacag
    13621 gtttgcccca atggtcgtcg gcatcgacat cgtgaacctg ataaccgcgc tgttccaaca
    13681 tttttacggc ttttgtgcgg ttttgttcaa aatggggatc accgtaaatc tgacgctcgg
    13741 cagaatcgtc ggcaaatgcg gttgcggcac tcagggaaac aacggcagcc aataacagtt
    13801 ttttcatttt cagtcctttc ttaatcggtt gattgaataa gatgtgtttt tcaatgctgc
    13861 cattaaaaca cagcaaaatt aggtttgaat tagcaggaag ttaagaagcg taaatgccgt
    13921 ctgaaaaaaa cagagccgtc aaacggctcc gttttcctta tgcttctttg gtttcagcca
    13981 ccttttgacg caggcgcaag ctcaattcgc gcaactgctt gtcgtccacg ctgttgggcg
    14041 cgttggtcag caggcattgg gcacgttgtg ttttcgggaa ggcaatcacg tcgcggatag
    14101 attcggcgcc ggtcatcagg gtaaccaaac ggtcgaggcc gaatgcaagg ccgccgtgcg
    14161 gaggtgcgcc gaatttcagg ttgtccaaga ggaagccgaa tttctcttgt tgctcttcag
    14221 ggctgatttt cagcgcggca aacactttct cttgtacgtc tgcacggtgg atacggatag
    14281 agccgccgcc gatttcccag ccgttcaata ccatgtcgta ggcgcgtgcc aaacaatttg
    14341 ccgggtcgga aaccatcagg tcttcatgac cttcttttgg cgcagtaaac ggatggtgta
    14401 cggcaacgta gcggtcggct tcttcgtcgt attcgaacat tgggaaatcg acaacccaca
    14461 aaggtttcca ttcgtctgtg aagtagccgt tgtctttgcc gtgttccaag ccgactttga
    14521 tacgcaatgc gccgatggct tcgttcacaa ctttggtttt gtccgcaccg aagaaaataa
    14581 tatcgccgtt ttgtgcgccg gtacgctcga tgatttcttt cagggcattc tcagacagga
    14641 attttacgat tggagattgc aggccgctgt cttcgccgtt tgagaggttg cccacatcgt
    14701 ttactttgat gtatgccaga cctttcgcgc cgtagatgcc gacaaattta gtgtattcgt
    14761 cgatttcttt gcggctgaat tttgcgccgt tcggtacgcg cagggcgact acacggccgc
    14821 ctttcatatc tgccgcgcca cggaagactt tgaattcttc cgttttcatc aggtcggtca
    14881 actcggtaaa tttcaagttg atacgcatat ccggtttgtc agagccgtag tagaacatgg
    14941 cttcggcgta aggcatacgc gggaagtcgc ctaaatctac gtttaaagca tctttgaaga
    15001 cttgtttcgc cataccttcg gtgatgtcca taatttcatc ctcgttcaag aacgaggttt
    15061 ccaagtcgat ttgagtgaat tcaggctgac ggtcggcacg caagtcttcg tcacggaaac
    15121 atttggtaat ttgatagtaa cggtcgaaac cggccaccat caacagttgc ttaaataatt
    15181 gcggtgattg cggcagcgcg aaaaactcgc ccggatgaac gcggctcggc acgaggtagt
    15241 cgcgcgcgcc ttccggagtg gagcgggtca gcatcggcgt ttcgatgtcg atgaagcctt
    15301 gcgcgtccag ataacggcga acgcccatag cgacttgata acgcaggcgc aggttgcgtt
    15361 gcatcaccgg acggcgcaag tcgataacgc ggttggtcag gcgaacgttt tcgctgatgt
    15421 tttcatcgtc gatttggaac ggcggcgtgg cggcggcgtt caagacttcg atttctttgg
    15481 caaggatttc gattttgccg gaaatcattt tgtcgttggt cgtaccttcg ggacggttgc
    15541 gtacgcggcc ggtaatgctc aaaacgtatt cgttgcgagc ggaatcggca gcggcaaacg
    15601 cttcgggcgt gtcgggatca atcacgactt ggacgatgcc ttcgcggtcg cgcaggtcga
    15661 taaaaatcac accgccgtgg tcgcgccgac ggtgtaccca gcctttgacg gtaacggttt
    15721 ggtctaagta ttgctcactg atcagaccgc aatagttggt acgcataaaa tcacctttta
    15781 ttgatttaaa ctgaaaacag aaaatgccgt ctgaacggcg gctttattgt tgttcgggca
    15841 aatccgcctt ttcaggcggc ataggtcctg ccaatgtttt gacgggcagg tcgtcaggga
    15901 tgaccatacc cagcgaaatc acatatttca acgcttcgtc cacgctcata tcgagttcgc
    15961 gcacatcgct tttctttacc ataatatagt aaccgccggt cggattcggc gtggtcggaa
    16021 catacacgga aagataatcg ccgtccttcg gcaatgcggc cttaaccgca ttcgacacct
    16081 gaccggacac gaatgcgatt gtccaaatac ccgattgggg aaacggcacg agtactggtg
    16141 ttttaaacga acggctgctg tcggacagca gcgattcgga tacttttttc acactcgaat
    16201 agatggactt cacaaccgga atccgcccca acaagctgtc ccacgcggca agaatctgcc
    16261 ggcccaatac gtttgcggca aataatccgg ttacaaacaa tacagcaatg gcaacgataa
    16321 cgcccagccc cgggatatta aaccccaaaa catattgcgg ccgccattgc ttcggcagca
    16381 ggttgacgag ctgatcggac gcggaaacga tataggaaac cacccaaacc gttaccgcaa
    16441 tcggcagcca gaccaaaatg cccgtaatca gatatttttt taacgccttg gcagctttac
    16501 cgccttcggc cgcaggttcc gtcatcttgc ttgattccga caaagtccgt acaaaccgca
    16561 cattatacgc gtttgcccgg attcaaacga aatttttatc ccgccccgcc aaaccgccag
    16621 cggcttcaga cggcacggca acttgatata ccgtctgaac acgcggttca gatgccgtcc
    16681 aagtcgttga acatcaaccc gataccgata ccgttctgct tgtggttgta gtcgatcagg
    16741 ctctcgccgt aaccgtggaa tccgcgtacc acgcctttga gtttgccctt aatcggaaac
    16801 gtgtaggcgg cttcaatcgc gccgtagccc gttttggggt tgtagcgcaa tacggaatac
    16861 acattctgcc tgtcgttcag gcggtactgc agcttcacgt cgccataccc catatagtcg
    16921 gcaatatcgg gattgtcgtt tttatcgccg ctctgatcga acgcacgcac ccacacgcgc
    16981 ggaatcaccg tcaatttgcc ccattccatg cctgccatgg cgtaaatcct gttccacgaa
    17041 cgcgattcgg gacggctctg tccgttggac tggtggacaa aacccgcacc gagcatacgc
    17101 agcctgccgc cgaacggcaa atccgccttc acaggctggg tcaggaaaat ttcaggtttg
    17161 taatccgtat tgcggaacgg cgcggatttc ctgccttggt tgtaaatctg ccaatcggat
    17221 ctttgggtgt agccgaacca cagatccgcg cgggttttaa acaaatcttc ggcaattttg
    17281 cttttgaacg aaacctgcaa tttggtttcc gcacgtttct gctgtccgaa tttttcctgt
    17341 acagtcgtac cgcgcgtcgg cgaacccggg gcatagttgg gcgaattgtt gtaccagagc
    17401 ggcataaggt acatcggatt gtgttcgcgt acgcccaaca gcccgcgcaa atcgtttttg
    17461 tccaagtcgt acatcaggct caaaggcgta tagatgtcgg cggtttcgcc cgcactgtcg
    17521 gcaggaagcg catccctgcc tttttcaaca acaatgaccg cctcgccctt atccaggctg
    17581 ctgcggacgg tttccgtcag attgagtacg gctttcgact cctgcccttc ctgccctgcc
    17641 gaagacggaa gctgtgctgc aaaaatcctg tcgtaacacg ccaaacgcgt aacattgtcc
    17701 gtcaaagcgg cgcattgcag cgcggtctct ccaaaagcgg atgccatcgg caacagtcct
    17761 gtcaaaagaa tatagcgcat attccgtgta ttcatctccg cccccattgt cggcatattg
    17821 gttttcaaac ggcattttat agcggattcg gataaaaacc gcaccctttc cgccatttcg
    17881 ggattttgcc cccgcaatac agaaaacccc gaaaccgtcg ggcttcaggg ttttccgctt
    17941 atcgcgtatc aaccgccttg gcggttttgc aaaaatcaag ccagtgcttt tacttttgca
    18001 gacagacggc ttttgtggcg tgccgctttg tttttgtgga acacgccctt gtcggcgatg
    18061 cggtcgatga ctttgacgga ctcttggtaa accgcttgtg cggcagcttt atcgcctgct
    18121 tcgactgctt tcaatacttt tttcactgca gtgcggaatg cggtacgcag gctagcgttg
    18181 tgggcgcgtt gtttgacgga ctggcgggca cgtttgcgtg cttgtgcgct gtttgccata
    18241 ttggaatctc ctagaagaaa aataaattct gtaaacgcgc aattttaaag ggggtttaca
    18301 ttatatgcaa gccttttctc tctatccgcc cgtcggacac cctgacagcg caaaaaaacg
    18361 gcaaaatcgg gcggacgttt tccccctctt ttgaaaacag ggtaattttt tagggaaatc
    18421 agtccaatat cactttgagt ttgcacaaat ttactttaca atgcccaaac cttgcgccgg
    18481 ggtgtttatg gggcgcgggg ttttcttttt ttccaacctc tttcatcagg aatctgcccg
    18541 tatgaaaaaa tccgtattag ccgttttggc cgcgctgtct ctggcagcct gcggcggcag
    18601 cgaaaaaaac gccgtgcaac ctcaagcaga cgctgcgtct gctgccaatg ccgaagccgc
    18661 tgccaccgat actctgaaca tctacaactg gtcgaactat gttgatgaga gtacggtcga
    18721 agactttaaa aaagccaaca atctgaagct cacttacgac ttgtacgaaa acaatgaaac
    18781 gctggaagcc aaaatgctga ccggcaaatc cggttacgat ttggttgtgc cgggcatcgc
    18841 cttcctaccg cgccaaatcg aggcgggcgc gtatcaaaaa gtcaacaaag acctgattcc
    18901 caactataaa aacatcgatc ccgaactctt gaaaatgctg gaaaccgccg acccgggcaa
    18961 ccagtatgcc gtcccctatt tctccggcgt gaacacgatt gcgattacgg cgaagggcaa
    19021 agagcttttg ggcggcaagc tgcccgaaaa cggctgggat ttgctgttca aacccgaata
    19081 cacccacaag ctgaaatcct gcggcatcgc cctgtgggac accccgagcg aaatgttccc
    19141 gattttgctg aactacttgg gcaaagaccc caaaggctcg aatcctgaag atttgaaggc
    19201 ggcggcggaa gtgttgaagt ctatccgtcc gaatgtcaaa cgtttcagcc cgtccatcat
    19261 cgacgagctg gcgcgcggcg acatctgcct ggcggcaggc aacggcggcg atttgaactt
    19321 ggcgaaagca cgttccgaag aagtgaaaaa caacgtcggc atcgaagtgc tgaatccgaa
    19381 aggcatgggc ttctggattg agtcttggct gattcccgcc gatgcgaaaa acgtcgccaa
    19441 tgcccacaaa tacatcaact acacgctcga ccccgaaatc gcggcgaaaa acggcatcgc
    19501 cgtaaccttc gcccccgcca gcaaaccggc gcgcgaaaaa atgcctgccg agctggtgaa
    19561 cacccgttcc atcttcccga acgagcagga tatgaaagac ggttttgtga tgccgcaaat
    19621 gagtacggat gcgaaaaaac tgtctgtcag cctgtggcag aaaatcaaag tcggcaccaa
    19681 ctgatttgaa gcattaaaaa tgccgtccga acatcgttcg gacggcattt tatattggat
    19741 tgaaatagaa atatttatat agtggattaa caaaaatcag gacaaggcga caaagccgca
    19801 gacagtacaa atagtacgaa accgattcac ttggtgcttc agcaccttag agaatcgttc
    19861 tctttgagct aaagcgaggc aacgccgtac tggtttttgt taatccacta taccgtcgtt
    19921 cccacggtca ggatttcaga ttgcggacat ctgtcagaaa agacaaaaaa ccttcctccg
    19981 tcatcctggc gcaggcgaaa atccggttcg ttgaaattcg gttgttttaa ataaatcctc
    20041 gcagctttga ttttctgttt ttccgataac gccgtaactt tgaaacgcga aagcggtaat
    20101 ccgatccgtt gggattttgc aacttcaaat caatccgcaa actgaaatcc cgtcattccc
    20161 acgaaagtgg gaatctagaa cacgtccgca cagaaaccta catcccgtca ttcccgcgca
//
LOCUS       DAXHRP010000019        19690 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.019, whole genome shotgun sequence.
ACCESSION   DAXHRP010000019 DAXHRP010000000
VERSION     DAXHRP010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.019"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(396..3002)
                     /gene="acnD"
                     /locus_tag="ACFM72_000543"
     CDS             complement(396..3002)
                     /gene="acnD"
                     /locus_tag="ACFM72_000543"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HFC6257156.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELNGKRQAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGSVIIAAITSCTNTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPDTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            complement(3080..3868)
                     /locus_tag="ACFM72_000544"
     CDS             complement(3080..3868)
                     /locus_tag="ACFM72_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HFC6257157.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFVGGVAGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIVSMF"
     gene            complement(4021..5175)
                     /gene="prpC"
                     /locus_tag="ACFM72_000545"
     CDS             complement(4021..5175)
                     /gene="prpC"
                     /locus_tag="ACFM72_000545"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HFC6257158.1"
                     /translation="MTETTQTPTLKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            complement(5261..6136)
                     /gene="prpB"
                     /locus_tag="ACFM72_000546"
     CDS             complement(5261..6136)
                     /gene="prpB"
                     /locus_tag="ACFM72_000546"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HFC6257159.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            complement(6762..8072)
                     /locus_tag="ACFM72_000547"
     CDS             complement(6762..8072)
                     /locus_tag="ACFM72_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HFC6257160.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            complement(8211..9389)
                     /gene="ftsZ"
                     /locus_tag="ACFM72_000548"
     CDS             complement(8211..9389)
                     /gene="ftsZ"
                     /locus_tag="ACFM72_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HFC6257161.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(9508..10752)
                     /gene="ftsA"
                     /locus_tag="ACFM72_000549"
     CDS             complement(9508..10752)
                     /gene="ftsA"
                     /locus_tag="ACFM72_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HFC6257162.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVTSCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            complement(10838..11566)
                     /locus_tag="ACFM72_000550"
     CDS             complement(10838..11566)
                     /locus_tag="ACFM72_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HFC6257163.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKTLGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYAYDGLPEKESEE"
     gene            complement(11556..12470)
                     /locus_tag="ACFM72_000551"
     CDS             complement(11556..12470)
                     /locus_tag="ACFM72_000551"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HFC6257164.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            complement(12583..13992)
                     /gene="murC"
                     /locus_tag="ACFM72_000552"
     CDS             complement(12583..13992)
                     /gene="murC"
                     /locus_tag="ACFM72_000552"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HFC6257165.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFVDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLSAARGAYLEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLALSKQI"
     gene            complement(14147..15214)
                     /gene="murG"
                     /locus_tag="ACFM72_000553"
     CDS             complement(14147..15214)
                     /gene="murG"
                     /locus_tag="ACFM72_000553"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HFC6257166.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPVTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDDARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(15218..16543)
                     /locus_tag="ACFM72_000554"
     CDS             complement(15218..16543)
                     /locus_tag="ACFM72_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HFC6257167.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(16669..18006)
                     /gene="murD"
                     /locus_tag="ACFM72_000555"
     CDS             complement(16669..18006)
                     /gene="murD"
                     /locus_tag="ACFM72_000555"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HFC6257168.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNSDDVFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGKKNGVVFIDDSKGTNVGAT
                     AAAITGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCDLN
                     MTDCATLEEAVQKAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(18091..18471)
                     /locus_tag="ACFM72_000556"
     CDS             complement(18091..18471)
                     /locus_tag="ACFM72_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC6257169.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYAEGQGVRQDYVEAVRWFRKAADQGLAQAQFNLGAMYYKGHGVRQDRALAQE
                     WLGKACQNGNQDGCDNDQRLKAGY"
     gene            complement(18586..19668)
                     /gene="mraY"
                     /locus_tag="ACFM72_000557"
     CDS             complement(18586..19668)
                     /gene="mraY"
                     /locus_tag="ACFM72_000557"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HFC6257170.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         4696 a         5451 c         4977 g         4566 t
ORIGIN      
        1 cgccttgtcc cgatttttgt taatcctcta taccatgtca attcagcctt tatttcgcgg
       61 gcaaagccca cgctacaccc actttccaga agtacattag gctgccactc cgacaaagcc
      121 gtttgattcc gcaaactgtc ggggttcgcc acaatctacg gctactgtgt tgtgatacgg
      181 cagattatta aaccccgtca ttcccgcgca ggcgggaatc caaatttgtc cgcacagaaa
      241 ctcatcggat aaataaggtt tcctcaattc cactttctgg attcccgcct gcgcgggaat
      301 gacgatttac agtagatgcc tgccatatcg agaattacgt gaatgagcaa aatgttgaac
      361 ccgacccacg ctacgtcttg cttttcagac gacctctaag ccgcgttccc ttccaaaaaa
      421 tcctgtgcaa accgttgcaa cacgccgccg gcttcatata ccaatacttc ttctgcagta
      481 tcgaggcggc aggtaacggg aacttcaacg gtttcgccgt ttttacggtg aatcacgagg
      541 gtcaggtcgc agcgcggtgt gcgttcgccg accacgtcgt aggtttccgt accgtccagt
      601 tgcagggtat ggcggttggt gtcgggtttg aactgcagcg gcaacacgcc catgccgata
      661 aggttggtgc ggtggatacg ctcgaagcct tcggcaacaa tcgcttctac gccggcgagg
      721 cgtacgcctt ttgcagccca gtcgcggctt gagccttgac catagtccgc accggcaatg
      781 atgatgagcg gctgtttgcg gttcatatag gtttcgatgg cttcccacat gcgcatggtt
      841 tcgccttcgg gttcgacgcg ggcgaacgag ccttggcgca cgctgccgtc ttcgtttttc
      901 accatttcgt taaacagttt cggattggcg aaggtagcgc gttgggcggt caagtggtcg
      961 ccgcggtggg ttgcgtaaga gttgaagtct tcttcaggca aacccatttt cgccaaatac
     1021 tcgcctgcgg cactgacggc caaaatcgca ttggacggcg agaggtggtc ggtggtgatg
     1081 ttgtcgggca aaatcgccag cggacgcata cctcttaatg tgcgttcccc tgccagcgcg
     1141 ccttcccagt aaggcggacg gcggatgtag gtggacatcg gacgccaatc gtacagcgga
     1201 ctgggtgctt tttgcgctgt gccggtgtcg aacatcggta catacacatc gcggaactgc
     1261 tgcggtttca catattcggc aacgacggca tcgatttctt catcggcagg ccaaatgtct
     1321 ttcaggcgga tttccttgcc gtctgcaacg ccgagtacgt cgttttcaat atcgaaacgg
     1381 atactgcctg ccagcgcgta ggcaacgacc aacggaggcg aagcgaggaa agcctgtttc
     1441 gcatacgggt ggatacggcc gtcgaagttg cggttgcctg ataatacggc ggtggcgtac
     1501 aaatcgcggt cgatgatttc tttctggatt ttcggatcca gcgcgccact catgccgttg
     1561 caggtggtgc aggcgaaggc gacgataccg aagccgagtt tttccatttc gggcaacagg
     1621 cccgcttctt tcaaatagat ttcggctact tttgaacccg gggcaaacga agatttcacc
     1681 caaggtttgc gtttcaagcc gagacggttg gcattgcgtg ccaagagcgc ggcggcaaca
     1741 acgttgcgcg ggttggaagt gttggtgcaa ctggtaatcg cggcgatgat gaccgagccg
     1801 tcgggcattt ggccgtccga aggctcttcg taaggcttcg ccagcccttt cgccgccaaa
     1861 tcggcggtcg caaaacgggc atgcgggtta cttgggcctg ccatattgcg cgttacgctg
     1921 ctcaaatcaa atttcaaaac gcgaggataa acggcggttt tcaaggcatc tgcccacaag
     1981 cctgcggttt tggcgtaggt ttccaccaat ttcacctgcg cgtcgtcgcg tccggtcagt
     2041 ttcaaataat caatggtttg ctcatcaata gcgaacatcg cggcagtcgc gccgaactcc
     2101 ggcgtcatgt tggaaatggt cgcgcggtcg ccgatagaca ggcttctcgc gccctcgccg
     2161 aagaattcga caaacgcccc gaccacgcgt tctttgcgca gaaactcggt cagtgccaac
     2221 acaatatccg tcgccgtaat gcccgcctgc cgtttgccgt tcagctcaac gccgacaata
     2281 tcgggcaggc gcatcatgga cgcgcgtccc agcattacgg tttccgcttc caatccgccc
     2341 acgcccacgg aaatcacgcc caatgaatcg acgtgcggcg tatgtgagtc agtaccgacg
     2401 caggtatcgg ggaaagccac gccgtttttg acttggacga cgggcgacat tttttctaga
     2461 ttgatttggt gcatgatgcc gttgcccgcc ggaatcacgt ccacattttc aaacgcggtt
     2521 tttgtccagt tgatgaagtg gaaacggtct tcgttacggc ggtcttcgat ttcgcggttt
     2581 ttgcggaagg catcaggatc gtaaccgccg cactccaccg ccagagagtg gtcgacgatg
     2641 agctgggttt gcaccaccgg attcactttg gcaggatcgc cgcctttttc ggcaatcgca
     2701 tcgcgcaggc ctgccaaatc caccaacgcg gtctgcccca gaatatcgtg gcacaccacc
     2761 cgcgccggat accacggaaa gtcgatttcc tgcttccctt ctatcaactg ccccagccag
     2821 ctttgcagcg tcggcaaatc gactttgtcc gcgcggttga ccaaattctc cgccaaaatg
     2881 cggctcgtgt aaggcagctt gtcgtaagag ccgggcttga tgtcctcaca cgccgcacgc
     2941 gcgtcgtagt attccaaatc cgtaccgggc agcggtttgc ggtaacgttg gttggcagcc
     3001 atgtcggttc tcctgtggat ctgtttttct tgtggtttga ggtttcagcc gacgttttga
     3061 aggggtcgtc tgaaagggtt taaaacatcg aaacaatcat ctgatacagc ggatttctct
     3121 cgtctatcaa caatttcaca gccatcgaaa tgctgatgac aatcagcagc ggcttaatca
     3181 gcttcgaacc gaagcggacg gcaaatctcg cacctaaatt cgcaccgaca aacgcaccga
     3241 ccgccatcgt tgccgcaatc gggaaaataa tcgaaccgtg cagcaggaat accgatagcg
     3301 aaccaagatt gcaggcaacg ttcgccaatt tggtgtaaga catcgcgttc aacagcttgc
     3361 agccgagcaa aacaataaag gcaatcagaa aaaacgagcc gacacccggt ccgaacacac
     3421 cgtcgtaaaa acccaaaagc ggtgcgaccg tcagcccgaa cagaaaaaaa gacattctgg
     3481 ctttgccttc cttactgccg tcgagcttgg gcgaaaacac aaaatacagt gcgacaaata
     3541 tcaacaaaac cggcacgacc gccagcagaa tatctttgga aaccaagctg accgataatg
     3601 caccggccac gccgcctaca aacgatgctg cggcaatcgg gagacctttc ttccaatcaa
     3661 tcaaaccttt gcgtgcaaaa gaaaccgtag ctgaaaacgt agcagcggct gcttgcagct
     3721 tgttggtggc aattgccgac acgggaggaa tacctgccaa caagagtgcg ggcagcgtaa
     3781 tcaaaccacc cccgcccgca atcgcatcga taaatccggc aatcatcgca accaaaccca
     3841 aagcgagtat tatatataaa tcttccatgt ttcttatcct gttacttgcg ccaatacagg
     3901 attatcttct cctattagat taaacttatt tcagacaacc tttccaataa ggcaaggtcg
     3961 tctgaaatcc ttagctttgc ataccgaaat taaagaacaa actgctattg cattcttcaa
     4021 ttatcgttct tcaatctcca caaacgccaa atcttcaggg cctgtgtagt ttgcgctcgg
     4081 acggatgatt ttgccgtctt tgcgttgctc aagaacgtgt gcgctccaac cggttgtacg
     4141 ggaaattacg aacagcggtg tgaacatagc ggtcggtacg cccaattttt ggtaggaaac
     4201 ggcagagaac cagtccagat tcgggaacat ttttttctct tcccacatca cgctttccaa
     4261 acgttcggca atgtcaaaga ggcgcatatc gccggtttct ttgctcaaac cgcgtgccac
     4321 ttctttaatg acaacgttgc gagggtcgga aatggtgtac accggatgac cgaaaccgat
     4381 cacgatttct ttgcggccga tgcgttcgcg gatgtcggct tcagcttcgt cggcattgcg
     4441 gtagcgtttt tgaatatcgt aagccacttc gttcgcgccg ccgtgtttcg gacctttcaa
     4501 cgcgccgatt gctccggtaa tgctggagta catatcagag cctgtaccgg cgatcacgcg
     4561 ggcggtaaag gtagaagcgt tgaactcgtg ttcggcatac agaatcagtg aaacgtgcat
     4621 ggctttgatg tgtgattcgc ttgggcgttt gccgtgcaac agttgcagga aatgaccgcc
     4681 gatggtctct tcgtcgcttt caacctcaat gcgtttgccg ttgtgcgaat attgatacca
     4741 gtacaagagg atgctgccga ggctggcgat cagtttgtcg gcgatgtcgc gcgcttcact
     4801 ttccggatgg ctttcacgtt caggatgaac gcagcccagc atggatacgc cggtacgcat
     4861 tacgtccatc ggatgggtat gtgcaggcag gctttccaaa actttaatca cacggatagg
     4921 caggccgcgc atggatttga gcttggtttt ataagcggcc agctcgaatt tgttgggcag
     4981 atggccgtga atcagcaggt gggcgacttc ttcaaactcg catttttgtg ccaaatccag
     5041 aatgtcgtaa ccgcgatagc tcaaatcgtt gccggtacgg ccaacggtac acaaagcggt
     5101 attaccggcc gcaacgccag aaagcgcaac ggatttttta ggtttgaggg tcggggtttg
     5161 agtagtttca gtcatggtat ttctcctttg tgtttttatg ggtttcgggt tttcagacga
     5221 ccgatgcgga tttgttgaaa ggcagtctga aagcggtaaa tcatttttga aacaatttat
     5281 ccagtttttg ctcgaaggca tgatagttca gatgctcgta cagctcggca cgggtttgca
     5341 tactgtccac caccgccgcc tgagtgccat cgcgcataat cgcttcgtaa acattcagag
     5401 cggctttgct tgctgcacgg aacgatgaca gcggatacag caccagcgac acgccgtttt
     5461 cagccagctc gctttgggta taaagcggag tggaaccaaa ctcggtaatg ttcgccaaca
     5521 cgggcacttt caccgcatct gcaaattggc ggtacatgtt caaatcggtc atggcttcag
     5581 ggaaaatcat gtccgcaccg gcttcgacac aagcttgggc gcgttcgata gcggcatcca
     5641 aaccttctac cgccagcgca tcggtacgcg ccataatcac gaagttctca tcaacgcgcg
     5701 catctacggc agctttgata cggtcgacca tttcatcttt agatacaatg gctttgttcg
     5761 gacggtggcc gcagcgtttt tgcgctacct gatcttcgat gtgaaccgct gcaacaccgg
     5821 cgcgttcaaa gttgcgaatg gtacgggcaa tattgaatgc accgccccaa cccacatcga
     5881 tgtccaccag cagaggcgta tccacgttgt ccgtaatgcg tcgtgcgtcg atcagcacat
     5941 cttccattgt ggtaatgccc aaatcaggga taccgcaaga acaggctgcc acgccgccgc
     6001 cggacagata gatggctttg aaaccgcttt gggtggccaa tcgtgcaaaa taagcattga
     6061 cgcaaccggc gacggcaagc ggattcgatt ctttcacggc ttggcggaaa cgtgctccgg
     6121 cagagtgttg actcatcata tttctccttt atagactttt tttcagtatg gacaggcttc
     6181 catcacattc ggacggcaaa acacagccat ccgacgcgtc gggcatccca atccaatcat
     6241 taaaaatata tgggaacaat tatcttattg atatttaaaa cgaatcaaag aaaaacagca
     6301 gaccgttcgg aattatgcgg caaaaccgca gacaagaaga aaacaagggg attattcaga
     6361 aaaggggaaa acatctgaat tggtttcata gtaatgttcc tttgtagtgt tatgtagttt
     6421 tatttttcga taatctaaaa cacaagactg aaaatgtcaa acatttttaa ggagactcat
     6481 tacataattt taatatttta ttttaattcc atgattaaac tagattaatt ttgaattatt
     6541 tgtttcaata aaattgtcag gaaatcaaga aaaatttttg ataatcaaaa tcctgaaaac
     6601 ttataaaata ttttatacat aaaaacaatg tattattttt aagcaatccg atgtatttta
     6661 ttatgtattt gatttttata taatttaata aaaattaaat atatcggcaa acaaaatgcc
     6721 gtctgaaaac ctttcagacg gcatttttaa tatcgaatca atcagcccaa ataccagaat
     6781 ttcagtgccc acaatacggc aacaatccat accataggcg gaacgtcttt ggtgcggcgg
     6841 cataaaagtt taaccacggc ataactgatg aagccgaaag cgatgccgtc tgcaatcgaa
     6901 taagtaaacg gcatgaaaac aatggtcagg aacgcaggtg cggcttccgt catatcgtcc
     6961 caatcaatat ccctcgcact gcggagcatc tgcgtgccga cataaagcag ggcgggcgcg
     7021 gtggcaaaag cgggaacact tttcgccaaa ggtgaaaaca tcaggcaggc gagcatcaat
     7081 acgccgacgg taaccgccgt caggccggtc cgtccgcctg ccgatacgcc cgccgcgctt
     7141 tccacataag gcgtggtgga agaagtaccc aaagccgcac ctgccacaat ggcggtagag
     7201 tctgcaagca gtgcgcgttt caggcggggc agcttaccgt ccaccagcag cccggcacgg
     7261 tgggatatgc cgaccagcgt tccggtactg tcaaatagat cgaccaagaa gaagacgaaa
     7321 atcacactga ccatgctgac ggtaaacagg ccttcaaaat ccatctgcat aaaagtcggc
     7381 gcaatgctcg gtacttcgcc gatgatgccg tgaaattcat tcaaacccat caggctggca
     7441 atgacggtaa tggtcaagat ggtgatgatg attgcgcctt gaacgcggaa atgtcccaat
     7501 acgaccacca tagcaaaacc gaacaatgcc aacaacgcgg acggctgatg aatatcgccc
     7561 aaaccgacca aggttgccgg attggcaacg ataatgcctg cgcctttcag ggaaatcagt
     7621 gccaaaaaca aaccgatacc ggcagcaatc gacattttca aacccatagg cagtgcgttg
     7681 accagcattt ccctgacttt aaaaaagctg aacaggataa aaatcagacc ggagatgaac
     7741 accgcaccca acgcaacctg ccaaggcacg cccataccct taacgacggc aaaggtgaaa
     7801 taggcattca gccccatccc cggtgcgagt gcaatcggat agttgccgac aaaacccata
     7861 acaaaacagc cgatggcaga cgcgatacag gtagcgacga ataccgcccc catatccatg
     7921 ccggtctcgc ccaaaatcag agggttgacg ataacgatgt agcacatcgt caaaaaagtt
     7981 gtcaaacccg ccatcaactc ggtacgcacc gtcgtaccgt ttgccttcag cttaaaaatc
     8041 ccgtccaaca gtgtttgttt tgaagtgtcc atatctgaaa gtctgtatca agtggaaaaa
     8101 tctgaatccg ccgaccgcaa accgtacgaa attgcaacat cttgaaaaac atacctccca
     8161 aaccggacaa accgattcgg gaggcagcag gtttacgggc aaacagcaca ttatttgtct
     8221 gaattgtgtt gacgacgcaa aatcgcaggg atttcaaagt cgtcaagtac ggactgattg
     8281 tcgaaatccg cagcggtaag gttcatcgtg cggataccgc gattggtgcg gatcatacct
     8341 tcgacattgt ggctttgctc ctgtttggac ggagcaaccg cttctacctc ccttgccgga
     8401 acaaaatcga ccgcgccttt ttctttcaga ccggtagcga taatggtaat ccggatggca
     8461 tcttcgctca tggtctcgtc ttcagccgca ccgaatttgc attccaaatc gggatgcgcg
     8521 ctttggttga cgattttcat gacttcggac aactcggaca ttttcaagca acccggagca
     8581 gtcgtaatat tgaccagcac accgcgcgct ccgtccaagg ttacatcgtc cagcagcgga
     8641 ctggaaatgg cctggtcggt cgccatacgc gcacggtcga taccttgggc ataacccgaa
     8701 cccatcatag cgataccgcg gttgctcatc acggttttca cgtcggcaaa gtcgaggttg
     8761 atgatttcgc tcgggcaagt taccacttcg gaaatgcctg cgaccgcatc gcgcaataca
     8821 ttgtcggcgg cacggaaggc ttcgcgcatc gttacgtctt cacccaatgc agtcatcagt
     8881 ttgtcgttcg ggatgataat cagcgaatcg acgtgttctt tcaactgttc caaccctgcc
     8941 tgtgcgacat ggacgcgctt accttcatat gcgaacggtc gggtaaccac ggcaacggtc
     9001 agaatgccca aagacttggc aatctcagca acaaccggcg cggaaccggt accggtaccg
     9061 ccgcccatac cggtcgtgat aaacagcata ttcgcaccgc gaatggcttc ttcaatggct
     9121 tcccggtctt cctgggctgc cgcacggccg atatcgggat tcgcgcccgc gcccaaaccg
     9181 cgtgtcagat tcgtacccaa ctggattctc ttcgccgcat ggttttttgc cagagactgc
     9241 gcatccgtat tggcactgat aaactccaca ccgcgcacat tgttggcaac catgttattg
     9301 attgcattgc aaccgccgcc gcccaagccg attactttaa tcaccgcagg gctgactgcc
     9361 gattctgcca cgtcgtaaac aaattccatt caaaaactcc tgctcgcccc attcagagga
     9421 cggtttaaat aaattattat tcattatata agaagtatct tgctgctggc aaaatacttc
     9481 tcacctgtca aacggcaatc cacctgttca gaagctgttt tcaatccacc gtttcaatct
     9541 tgccaacaaa ccgccgcccc cttccctctc ttgcactgca ccgttttccg gctgcggcaa
     9601 gtttccttcc agcttgcatg ctgcatgaag cagcccgatg gcggtagaaa agcgcggtgt
     9661 gcggacgcgg tcggacaaac cgcccatttc ttggggcgca ccggtgcgta caggcaaatc
     9721 gaagattttt tcggcaaatt ccacaatccc ggtcatcatg gacacaccgc cggtcagaac
     9781 aatacccgca ttcagcactt ctttggggaa acccgatttt tgcagctcgc ccagcactac
     9841 gccaaaaatc tcctgaatac gtgcactgat gattgctgcc aaaaccttac tggaaacctg
     9901 acgcgatgtc cggtcaccca cgcccggaac ttcaatcatc tcacccaagc cttccgtatc
     9961 gcatgatgtc acgccataat ggattttaat gtactcggcg gcatcgagag gtgttctcaa
    10021 cgatttggac aaatctttgg taatcagatt accaccggcc ggaatgacgg acgtatggcg
    10081 gatggcgccg ttcatataaa cggcaatatc ggtcgttccg ccaccaatgt cgatgacgca
    10141 tacgccgagg tctttttcat cttcagtcag caccgcctgc ccgcttgcca acggctgaag
    10201 catgatctga tcgcttttca agccgcaccg ctcgatacat ttttggacat tctgcactgc
    10261 cgtacttgca ccggtaatga tgtgcacccg cgtatccaaa cgcacaccgc tcataccgat
    10321 aggctccctc acgccaagtt gggtgtcgat aatgtagtct tgaaccacag catcgagaat
    10381 tttttgatcg ggcgggatat tgattgcctt tgccgtttca atggcgcggt cgatgtctgc
    10441 ctgcgtgact tccccgtctt taattttaac cacaccttgc gaattgagac tgcggatgtg
    10501 gttgcctgcg atacctgtgg taacgtgggt aattttggta tccgccatca gctcggcatc
    10561 attgaccgcc tgcctgatgg cttggacggt ggcatcgata ttggttacca tgcccgcgcg
    10621 caagccccgt gaaggagcct gccccaaacc gacgatgttg attttgtcgt catcttgaac
    10681 ttccccgatc agtgcgagga ctttagacgt accgatatcc agtacgctga tgtatctttg
    10741 ctgctgttcc attgttcgtc tgctcttaaa actgattgaa atttgcgtcg caccgtttca
    10801 gacggcacgg ccgtaatctg tccgatacct gttcccacta ttcttcggat tctttttcgg
    10861 gtaaaccgtc gtaagcatag cggactgaaa atccgtcctt atacctcata tccacatagg
    10921 ataaccgatt tttattttta cgcaacagat gctgccacgc ttcggtaaaa agccggaggc
    10981 gtttcatctc gttttcccgt ccgagcctga cggtgatgcc gttgtccaaa acgacaatcc
    11041 acgccgaacg tgccgtatag gtcatctctt tgatgcccaa accctgtttt gccaaaacag
    11101 tcgaaaattc gtcataacgg cggagcattt cggcagacgt tccttccgcg cctctgaata
    11161 ccggcattcc gggtctgtcc aagcgggctt caaaaacatt gccttcgccg tccaccaagg
    11221 catggtcgcc ccaacgcgcg accggcttgc gctcggtcag gacgacctca accgtgtcgg
    11281 gaaaacggcg gcgaaccatg accgacgcaa tccacggata ccggcggtag gcctcctgtg
    11341 cgccattgat gtccgtcctc aaaatattcc catggatgta ttctttcgcc aaactgccca
    11401 atgtcttctt atcggaataa accaggttgc ccttcagcga cacctgcttg acgggcagat
    11461 gattcgaatt gtaaaaccaa accagcccgg acgcagcaag cagcatcgcc atcatgacaa
    11521 gcagccagcg cgtcagccgt tccatcgctt cggcattatc ccacatgtgc ggtcttcaaa
    11581 atttcaatac ataaatcggc aaaacccacg cccgtaacgg cagcggattt cggtactaaa
    11641 ctatggctcg tcataccggg cagggtgttg atttccaaca gatagagttt gccgtcggta
    11701 tctttgagga aatcgacgcg cacgcagcct tccgcaccga ttgcctgcgc gccgcgaacc
    11761 gccagttcgc gcatcaggct ttcttcggct tcggtcaaat cttccgaagg acattgataa
    11821 atggtgtcgt cgcggttgta cttggcttcg tagtcgtaaa actcggttgc gggaatgatg
    11881 tgtatgccgg gcagcccttt gccgttcagg acggggcagg aatattcgcc gccgccgata
    11941 aaacgttcgg caatgatttc gccctgaagg tgtttcaatt cttcgtaaac gcttttcaga
    12001 cggccttttc ctttgacttt taccacgcct acgctgctgc cttcggccgc cggtttcaca
    12061 aacatcggca ggcccaattt ttcttcgacg gcatcgaaat cagtgtcgtc gtgcaggacg
    12121 gcgaactcgg gaacgggcaa tcccaatgcc tgccaaatca gtttgcagcg gtatttgtcc
    12181 atgccgatgg cggatgcggc gacaccgctg ccggtatagg gaatgcccaa cagttccaat
    12241 gcaccctgaa ccgccccgtc ttcgccgtaa gtaccgtgaa ggatgttgaa tgccgtctga
    12301 aaaccttgtg ccttcaattc agacaatggg gtttctttag gatcgaaggc gtatgcgtct
    12361 atgcctttgc tttttaaagc attcaaaatg gcggtgccgc tgtccagcga gatttctcgt
    12421 tcgctggaaa aaccgcccat caatacggcc actttgccaa aattctgcat tgtttttgtt
    12481 ctttcctgat tgctttatgc ttgttgccag aggtcgtctg aaacctgatt tgcggtttca
    12541 gacgatcttt atatgatgtt ccgtctgtca ggcgggtgtg cctcaaatct gtttcgacaa
    12601 tgccagcagc gcggcgggga cgcggttgat gcttcccgcg cccatattca acacgatgtc
    12661 gccgtcctgc aaaacgttca acagcatttc gggcagatcg gcaacgtttt cgcagtaaat
    12721 cggctcgagt ttgcccaaca cgcggatggc gcgggcaaga gcgcgggaat cggcggcggc
    12781 aatcggctct tcaccggcgg catacacttc ggtcagcacc agcgcgtcaa cggtattgag
    12841 gactttggta aagtcttcaa acaaatcgcg cgtgcgggta tagcggtgcg gctggaaggc
    12901 gagtaccaaa cgtttttcca gatacgcgcc gcgtgcggcg gaaagggtcg ccgccatttc
    12961 gacggggtgg tgtccgtagt cgtccaccaa gagcgcggtc ccgccgtttg gcaacttgat
    13021 gtcgccgtat ttttggaagc ggcggccgac gccttcaaag ccgagcaagc ctttttggat
    13081 ggcttcaacc gatgcgccga cttccaacgc aacaccgatg gctgccaagg cattgagaac
    13141 attgtggcgg ccgggcatat tcagcacgac ttcaaacgac ccctgctcat gtcctttcat
    13201 ttgaacatgg acggtgaatt tcatttgcgc gccgacgttt tcgatgtcgg tggcgtagat
    13261 gtcggcggta tcgtccaagc cgtaagtggc ataaggtttg ctcactttgg gcagaatcgc
    13321 gcggacgtgt tcgctgtcga tacacaaaaa cgctttgccg tagaacggca tacggtggat
    13381 aaaatcaaca aacgcctgat gcagtttttc aacgctgtgt ccgtaggtat ccatgtggtc
    13441 ttcgtcgata ttggtgacga cagacataat cggggttaga tgtaggaaag aggcatcgga
    13501 ttcgtcggct tcggcgacaa tgtattcgcc tttgcccaaa cgggcgttgg tacctgcggc
    13561 gttgagtttg ccgccgataa cgaaagtcgg gtcaagtcct gccgcgccga ggatggaggc
    13621 ggtcaggctg gtggtcgtgg ttttgccgtg cgtgccggca atggcgatgc cgtcacggaa
    13681 gcgcatcaac tccgccaaca tcagggcgcg cggaataacg ggaatttgct gctccaacgc
    13741 agcgacaact tcgggatttt cttttttgac ggcggtagag gtaacgacga catccgcacc
    13801 gttaacgtgt tctgcggtat ggccgggata aacttgaatg cccaggctgc ccaaatgctc
    13861 ggtagcggca tttcgcgcct gatccgaacc ggaaacttta aaacccaaat tgtgcaagac
    13921 ttcggcgatg ccgctcatgc cgacgccgcc gataccgaca aaatggatgt tggtcactcg
    13981 atttttcatc ataatgttgc gttccggtgg attttcgatg cgtaaaggcg ttattttaaa
    14041 gggctgaccg tttgcgcgcc atagttttct gacaaatata tagcggattg aaataaaaaa
    14101 catccatgcc gtctgaacgg cttttcagac ggcatggttc ggcagtttac gccgcacacg
    14161 caatcgcggc ttcggcaacg tcgtccgcgc tgtgcggcaa tgccaaagta cgggcgtttt
    14221 ctgcccattt gagacatttt tcgcggttca ggctgccgag gatttcggcg agtttttccg
    14281 ccgtcaactg ggtttgcggc aacagcagtc ctgcttctgc ctgcaccata aaacgcgcgt
    14341 tggcggtttg gtgatcgtca accgcgtggg ggtacggaac gagcaacgca cccaatcccg
    14401 ccgccgtcaa ctcggcaatc gtcagcgcgc cggcacggca aatcaccaaa tcggcatcgc
    14461 ggtaggcgga caccatgtcg gtaataaatt ccacgcattc ggctttcacg cccagcgcgt
    14521 cgtaatccgc ctgcaagctg cccagcttgc cccgtcccga ttggtggtac atctgcggac
    14581 gcgcatcgtc gggcagcaaa gccaatgcct gcggtacggt tttgttcaaa acgtccgcgc
    14641 ccaaactgcc gccgaccacc aaaattttca gacggccttc acgcccttgg aagcgttcgg
    14701 caggcacggg caggttgcta atatcggcgc ggacggggtt gccgaccaag ccgccttcgt
    14761 ggctgaacgc tttcggaaaa gcgtacaaca cccgcttcgc ccagcgcgac aggtggcggt
    14821 tggacaagcc tgccacggcg ttttgctcgt gaatcacaat cggcacgccc aagagtttcg
    14881 ctgccagacc gccgggaaag gtaacgaagc cgccgaagcc gatgacgcac tcgacacggt
    14941 gtttgcggat aatccgctgc gcttcgcgga cggtttgata caaagtaacc ggcagcatca
    15001 gtttgcgttt gatgccgttg ccgcgcacgc ctttaatcgc cagcgtttcc aagcgtatgc
    15061 cgtattgcgg cacgatacgc tcttccatcg aatccttgct gcccagccaa atcacatgat
    15121 ggccgcgcgc gcgcaatgaa tccgccaccg ccagcgcggg gaaaatatgt ccacccgttc
    15181 cgcccgccat cagcataaag gttttaccgc ccatgattta ctccacccga taaccgcgca
    15241 ttttccggcg gttttcataa tctatacgca acagcagcat catgctgatc agcatgaaaa
    15301 agactgacga accgccatag gacatcaacg gcagcgtcag acctttggtc ggcaaagcac
    15361 cgatgttcac accgatattg aagaaacttt ggataccgat ccaaatgccg atacccgaag
    15421 cgatataggc gttgaaagtc aaacccaaat cgcgcgactg cttgccgatg gaaaacgccc
    15481 gcaccaccag ccagccgtaa cagaatatca gcacgcacat accgaagaaa ccgaattctt
    15541 cggcgatgat ggcaaaaata aaatcggtat gcgcttccgg cagaaagccg cgtttgctca
    15601 aactcgcacc caaacccata ccgaaccact ctccgcgccc gattgccatc agagagtggg
    15661 taagctggta gccggcaccc tgcgggtctt tccacgggtc caaaaatgcc actacccgct
    15721 gcacacggta gggagcggcg gtaatcatca gcaccatccc gcccaagacg ctgcctacca
    15781 ggacgaaaaa atatttccac ggcaatcctg ccaaaaacag cattccaacg gcaatgacgg
    15841 taatgacgac aaacgaaccg aaatccggct gtaccattat cagcaccaaa ccgaacgcca
    15901 ccagcataat cggcaggatg atcgcccgga aacggccgta catttctaat gtttcacgac
    15961 gtgcctgcgg attggtggcg gacatgatca gattggccgt cccccgccaa atcgactgcc
    16021 aacccaaact ttccatgctg cgcaacactt cttcacggcg cgtgaacagg cttgccaaat
    16081 aaaggatgac cgccagcttg aacagctcgg tcggctggaa attcaacgga cccaaaggta
    16141 tccaacgggt cgcgccattg atttcgcgcc cggcaatcaa tacgactacc agcaacaggc
    16201 cggatagggc aaaaatccac ggcacaagcc gccgccatgt cctcatcctg caaagaaacc
    16261 ataaaaaacc gctcgctatc aagccggcaa cgacgaaccc cgcctgtctg gtcaaataga
    16321 aaaactgatc gccgccttcc ttcgatgcca aatacacaga agccgaataa atcatcagca
    16381 ggctgaacgc cgtcatcagc accaccatcc acaaaagcgg cgcgtcgaat ttcctgccgt
    16441 cgcgcacaat cggtctgtcg agcagcagag tgtggacacc gtcgcccact tttaccaata
    16501 cttccgaaat cttcaaaaaa accacctgcc agtctgtttg cacctgccgc aaagggcaaa
    16561 aatttcagac ggcagacaat gccgtccgaa catacgatac atcccaaatc ggtattctaa
    16621 atctttactt gccgcccaac aatgacggcg tttgcatttc agacggcatc acaaagcctt
    16681 aaacgcttcg ataaacactt ccgaacggtg cgcgtagcct ttaaacatat caaaactcgc
    16741 acaagccggg ctgagcagca cgatatcgcc cgcttcggct tgggcatatg ccttctgaac
    16801 cgcttcttcc aaagtggcgc agtcggtcat attcagatcg cagccgtcca aatcgcggcg
    16861 gatttgcggc gcatcgacac cgatcaggaa cacgcctttt gccttgccgg caagcgcatc
    16921 gcgcagaggc gtgaagtcct gccctttgcc catgccgcct aaaatcacga agagcggatt
    16981 ttgcaaaccg gtaatcgcgg cggcggtcgc gccgacattc gtgcctttgc tgtcatcaat
    17041 gaataccacg ccgtttttct tgccgatttt ttccacgcgg tgcggcaggc cttggaaggt
    17101 tttgacgtgt tcaagcaatg cttcgcgcgg caaaccgacg gcttcgcaca aggcaacggc
    17161 agccatcacg ttagtggcgt tgtgcaagcc ttgcaacgga atatcttgcg tggcaatcaa
    17221 atcttcattg ccttgtttca ggcggcctgt ctcgcgttcc aaccaaaaat cggcttcgtg
    17281 ttccaacgaa aaccatttca cttcacgccc tgcccgtttc atggcgcggc agaacacgtc
    17341 gtctgaattc aaaacctgaa cgccatcgcc acggaaaatc ttggctttgg tatgcgcgta
    17401 gtcgagcaag tcgtcgtagc ggtcgagatg gtcttcggaa atgttcagca ccgtcgccgc
    17461 agtcgggcgc aggctttcgg tgttttccag ttggaagctg gaaagctcca acacccacac
    17521 gtccgccttt ttgccttcgc gctgccattc cgcctccaaa accggcgtgc cgatattgcc
    17581 cgcgataacg gtatccagcc cgcacttgat acagagatag ccgaccaggc tcgttaccgt
    17641 ggttttgccg ttgctgccgg taatcgcaat taccttgtcg ccgcggcggt tcacaatgtc
    17701 cgccagcaat tcgatgtcgc ccaacacgcg tccgccgttt tgcttgaacg cctcgatatc
    17761 cggctgccgc tcgctgatgc cgggactgag cgccagaata tcgaaaccgt tgtccagcgc
    17821 atctttcaga cggcccgtgt aaaacaccag cccgtcaaac atcttaccga tttgcgacac
    17881 gcgttccggc ttcagctccg catcatacgc agcaacctcc gcgccgtttt tgcgcaggta
    17941 ggcaatcatg gaaatacccg tgccgccaag tccggcgacg aggatttttt tgttttggaa
    18001 agtcattttg gtttgtccta aaacaaatca tattgggcag ggggatgtct actcctgctc
    18061 aagccgcttt cagacggcat tgcgagctgt tcaataaccc gctttcaggc gttggtcatt
    18121 gtcgcagccg tcttggtttc cgttttgaca cgccttgcca agccattctt gtgcaagggc
    18181 gcggtcttgg cgcacgccgt gccctttgta atacattgcg cccaaattaa attgggcttg
    18241 tgctaacccc tgatccgccg ccttacgaaa ccatctgacc gcttcgacat aatcttggcg
    18301 cacgccttgt ccttcggcat acattgcgcc caaattgtat tgggctgctg catttccctg
    18361 tgctgccgcc tgcaagtttt cccgaaaatc cgatacgtca tccgcccaca ccgcttggtt
    18421 caagcccaag gcaatcaggg cggcggcaag ccatttgact gtctgtttca tggttttact
    18481 tctgttttag tataagccgc cgttaacgat agggctgggc ggattgtcgc cgcaggttta
    18541 ttgcgcgttc aaatgccgtc tgaaaggtgt tcagacggca taggttcagc ggattttgag
    18601 ggtactcaaa ccgatcaaca ccaagacgat ggtaataatc caaaagcgga cgacgacttg
    18661 ggtttctttc cagccttttt gttcgtagtg gtgatggatg ggcgccatca ggaagatgcg
    18721 ttttttggtt ttcttatacc agccgacctg aagcataacg gatacggctt ctacgacaaa
    18781 taatccgccc ataatgacga ggacaaactc ttggcggacg atgacggcga cggtaccgag
    18841 cgcggcaccc aatgccaatg caccgacatc gcccataaag acttgcgcgg gataggcgtt
    18901 aaaccacaag aaaccgaggc acgcgccgca catggcggta cagaatatag cgacttcgtt
    18961 cgcaccggcg acatagggaa gctggaggta ttgggaaaat tggtagtgtc cgctgacgta
    19021 ggcgaagatg gcgaggccgg cggcaacgag gacgacgggg aaggtcgcaa ggccgtccaa
    19081 gccgtcggtg aggttgacgg cattggatgt gccgacgatg gtcaggtaag acaacaccaa
    19141 aaagccgacc acgcccagcg gcagggcgat ttgtttgaag aacgggacaa tcaaaatatt
    19201 gttggcggaa ttggcggcaa ggtaaaacaa tgccaaaccg gcgataatgg caacgcttga
    19261 ctgccacacc attttgaatt tggcggacac gccgttgggg tctttataga cgactttgcg
    19321 ccagtcgtcg taaaaaccga gtgcgccggt agcgagcaat acgcccaaga gaatccagat
    19381 atacgggttt gcccagttgc cccacaacag ggtggacact gtaatggcgg tcagaatcag
    19441 cgaaccgccc atcgtcggcg tgccgttttt gacgaggtgg gtttgcgggc cgtcggtacg
    19501 cactgcctgc ccgcatttga gcgcggtcag cctgcgtatc gtccacgggc cgaacatcag
    19561 ggaaaacgcc aaggcggtca acgccgccat gacggcgcgg aatgtggtgt attgaaaaat
    19621 attcagaccg gttaaccagt tgctgaaatg tgcgagccat aaaaacatgg ggcttccttt
    19681 ttttgttttg
//
LOCUS       DAXHRP010000020        18063 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.020, whole genome shotgun sequence.
ACCESSION   DAXHRP010000020 DAXHRP010000000
VERSION     DAXHRP010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.020"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..255
                     /locus_tag="ACFM72_000558"
     CDS             <1..255
                     /locus_tag="ACFM72_000558"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257171.1"
                     /translation="YIDSRRQVLDTAFSYKSDGRMVLFKSIKQESISFLSEDLKKDWM
                     FHKVKTGEKDGYGSDEMLSVPRVYLEMMSRKTGVPYSSIL"
     gene            complement(702..899)
                     /locus_tag="ACFM72_000559"
     CDS             complement(702..899)
                     /locus_tag="ACFM72_000559"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HFC6257172.1"
                     /translation="MLKEGAAKNGVHIEEIKANATSQSCYSCGRLNKRIGVAATRTNM
                     VCEGFGRHYDTDENASSNIRK"
     gene            1485..2849
                     /locus_tag="ACFM72_000560"
     CDS             1485..2849
                     /locus_tag="ACFM72_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6257173.1"
                     /translation="MQHLTERMTQIAKLLNSSANNPDIDIPDFLTEIKDYSEFSVTDE
                     NGTYLHWDKFRRIHTEDTRMKWRAVKESRKKIQKPIDFPFEHQFWFCIPDSLQARLHL
                     IDKSCGSSIGTSSLGGFGRSEQNRFLLKSLIMEEAITSAQLEGAATTRKVAKDMLKSQ
                     RKPKTKDEIMIVNNYHLMKKAVELKNTPLSVEMILDLHRIATSNAIENKAEPGQFRQD
                     DEIFIADINGNSLYQPPPHGQVHTLMEEVCAFANNTYDGVENPFIHPVVQAIILHFLI
                     GYIHPFGDGNGRTARALFYWFMLKNGYWLFEYISISRLLKNAPAQYAKSYLYAETDDL
                     DLTYFIYYQCDIIKRAVADLEHYISDKQKHQQEFKAAIAQYTEKIGKLNQRQIGILQK
                     AVEESGKIFTAQEIANQYGISLNTARSDLSKLGEYRFLVPFKSGNALEYVAPQDLLER
                     LEKK"
     gene            3210..3716
                     /locus_tag="ACFM72_000561"
     CDS             3210..3716
                     /locus_tag="ACFM72_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257174.1"
                     /translation="METTFALLNFKESLCYIYPPTEPVRYVSSIVALNVHSPNGTGDW
                     HSAKALSDRAYPEKFYIYGENQERNTNHLFGDNGIIDGTDRLNKMGYFPENIPVWLAD
                     HPRACVDYLYTAVLQTGSIGRVILDDWFPSDEDKQSVYDLLNQIEPHLNTQEWENLQL
                     WKRKNPIM"
     gene            3843..5132
                     /locus_tag="ACFM72_000562"
     CDS             3843..5132
                     /locus_tag="ACFM72_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HFC6257175.1"
                     /translation="MMKSILTVSGNRMRKPRITYLDVWANDERIGTLEKGAMYRFAYD
                     NPNSSLLGLHYQDRSKVYISNNMPHIFAQYFPEGFLDAHITSKYAFHDAPFEDNEMLR
                     LAILCRETLGRIHVRCNDPLFNEWIDGLEMKNPRILTERDLLGINARQVFQQYMAEIF
                     HHGRFVSVSGIQQKMSLEAIRRNTKQTASYIAKGFDASEYPCLAANEFLCMQTIKQAG
                     IAVAQTSLSEDSSVLLVRRFDVSEQGYFLGMEDFTSLRQYSVEDKYKGSYAAIAQIIR
                     QISGRPDEDLIHFFNQLAASCILKNGDAHLKNFSVLYHDEYDVRLAPVYDVLDTSIYR
                     VGTQGIFDAYDDTLALNLTNHGKKTYPSKNTLLDFAEKYCDLGREDASFMIDTIVQAK
                     EQVLVKYSDVLRENEWLAQKWHFIPDENEEGLPFTFR"
     gene            complement(5457..7244)
                     /locus_tag="ACFM72_000563"
     CDS             complement(5457..7244)
                     /locus_tag="ACFM72_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HFC6257176.1"
                     /translation="MKLPLSYLPNIRFLSWCCLLAGIIAPATLLASPNPAEIRMQQDI
                     QQRQREEQLRQTMQPESDVRLHQKNTGETVNQLMGDDSSQPCFAINEVVLEGEHHARF
                     QFALKRALRETGFQAGKCLHAGNINQIMSLAQNALIGRGYTTTRILAAPQDLNSGKLQ
                     LTLIPSYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLEQGLENLKRLPT
                     AEADLQIVPVEGEPNQSDVVVQWRQRLLPYRVSVGMDNSGSEATGKYQGNITFSADNP
                     LGLSDMFYVNYGRSIGGTPDEESFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRY
                     HQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLGVKLWMRETKSYIDDAELTV
                     QRRKTAGWLAELSHKEYIGRSTADFKLKYKRGTGMKDALRAPEEAFGEGTSRMKIWTA
                     SADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLSAERG
                     WYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLSGQTLVGTAIGIRGQIKLGGNLHY
                     DIFTGRALKKPEFFQSRKWASGFQVGYTF"
     gene            complement(7299..7757)
                     /locus_tag="ACFM72_000564"
     CDS             complement(7299..7757)
                     /locus_tag="ACFM72_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HFC6257177.1"
                     /translation="MPITPPLNIISPKLYPNEQWNESEALGAITWLWYQSPTHRQVPI
                     VEMMTYILPVLKNGQFALFCKGTQPIGYISWAYFDEVAQAHYLESDRHLRDNSDWNCG
                     DNIWLIQWFAPLGHSHQMRSAVRQLFPSTTVRALYHKGSDKGLRILTFKT"
     gene            complement(7923..8237)
                     /locus_tag="ACFM72_000565"
     CDS             complement(7923..8237)
                     /locus_tag="ACFM72_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257178.1"
                     /translation="MKKTLSNLVLISFCSTMLTACPFWGSCADWNCSKLNPRWEKAVD
                     TCETENLTFVLHELGNQLGYKSITEVSFSEIGQHISYQCIHHGGGYNIRKDKQYGHLF
                     VQ"
     gene            complement(8249..8548)
                     /locus_tag="ACFM72_000566"
     CDS             complement(8249..8548)
                     /locus_tag="ACFM72_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257179.1"
                     /translation="MKKKLSKYSLFLSSVFCLTACATTLLGTVVVGTALYGTSSNWTT
                     TDKEHQEIMNCLDKALVKLNIYFENDEEKYKNKTVMDIYYQCIKNPNYVVTHNNL"
     gene            complement(8529..9530)
                     /locus_tag="ACFM72_000567"
     CDS             complement(8529..9530)
                     /locus_tag="ACFM72_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFC6257180.1"
                     /translation="MFATTQADRAVRSATAPKEMWFHKKIIDEKTGKVSFDTRQIWSL
                     NDLSKEELASIQDTNGKVITVSNPGIFNNREDSLSNAAKQNRNSTNGSGVIAVMNPPT
                     GKYKSDSNNKIKDFLWLGSSLVSELMYVGYDQLNNKVFQGYLPKTNSEKLNQDIYREV
                     QKMGNGWSVDTSNHSRGGITASVSLKDWVNNQKQNGIAPIRKARFYGTATNVQNDYAD
                     VLQKNGYTYTGADGKTYNSGSYSIVHDKDFVGNKWIPFLLGTNDTTQGTCKGLCYSHS
                     SYFAEVPKAGTKEFDDYVKIWGEVEYDAQGKPINKSKPILVEPNKTKDNEKYEKEAF"
     gene            complement(9611..10027)
                     /locus_tag="ACFM72_000568"
     CDS             complement(9611..10027)
                     /locus_tag="ACFM72_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257181.1"
                     /translation="MNKNILYIFSLLITIVIFFIFEKNVIRKISFNYNKKEFLISDIT
                     NFNWDYVKLYIINSDFQKIVFYHKSKIVFEELIELDKEGNVLPQYLFDSDLKNVEYYE
                     CDYKNGKMQLLKKEKSHFFDGYFYYYKPINCRPKLL"
     gene            complement(10031..17575)
                     /locus_tag="ACFM72_000569"
     CDS             complement(10031..17575)
                     /locus_tag="ACFM72_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HFC6257182.1"
                     /translation="MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSDSGSAHVKSV
                     PFGTTHAPVCRSNIFSFSLLGFSLCLAVGTANIAFADGIIADKAAPKTQQATILQTGN
                     GIPQVNIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLARGEA
                     RVVVNQINSSHSSQMNGYIEVGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQY
                     QAGDLSGFKIRQGNVVIAGHGLDARDTDFTRILSYHSKIDAPVWGQDVRVVAGQNDVV
                     ATGNAHSPILNNAAANTSNNTANNGTHIPLFAIDTGKLGGMYANKITLISTAEQAGIR
                     NQGQLFASSGNVAIDANGRLVNSGTMAAANAKDTDNTAEHKVNIRSQGVENSGTAVSQ
                     QGTQIHSQSIQNTGTLLSSGEILIHNSGSLKNETSGTIEAARLAIDTDTLNNQGKLSQ
                     TGSQKLHIDAQGKMDNRGRMGLQDTAPTASNGSSNQTGNSYNASFHSSTTTPTTATGT
                     GTATVSISNITAPTFADGTIRTHGALDNSGSIIANGQTDVSAQQGLNNAGQIDIHQLN
                     AKGSAFDNHNGTIISDAVHIQAGSLNNQNGNITTRQQLEIETDQLDNAHGKLLSAEIA
                     DLAVSGSLNNQNGEIATNQQLIIHDGQQSTAVIDNTNGTIQSGRDVAIQAKSLSNNGT
                     LAADNKLDIALQDDFYVERNIVAGNELSLSTRGSLKNSHTLQAGKRIRIKANNLDNAA
                     QGNIQSGGTTDIGTQHNLTNRGLIDGQQTKIQAGQMNNIGTGRIYGDNIAIAATRLDN
                     QDENGTGAAIAARENLNLGIGQLNNRENSLIYSGNDMAVGGALDTNGQATGKAQRIHN
                     AGATIEAAGKMRLGVEKLHNTNEHLKTQLVETGREHIVDHEAFGRHELLREGTQHELG
                     WSVYNDESDHLRTPDGAAHENWHKYDYEKVTQKTQVTQTAPAKIISGNDLTIDGKEVF
                     NTDSQIIAGGNLIVQTEKDGLHNEQTFGEKKVFSENGKLHSYWREKHKGRDSTGHSEQ
                     NYTLPEEITRNISLGSFAYESHRKALSHHAPSQGTELPQSNGISLPYTSNSFTPLPSS
                     SLYIINPVNKGYLVETDPRFANYRQWLGSDYMLDSLKLDPNNLHKRLGDGYYEQRLIN
                     EQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIALSAEQVAQLTSDIVW
                     LVQKEVKLPDGGTQTVLVPQVYVRVKNGDIDGKGALLSGSNTQINVSGSLKNSGTIAG
                     RNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGMLSAEQTLLLNAGNNINSQSTT
                     ASSQNTQGSSTYLDRMAGIYITGKEKGVLAAQAGKDINIIAGQISNQSEQGQTRLQAG
                     RDINLDTVQTSKHQATHFDADNHVIRGSTNEVGSSIQTKGDVTLLSGNNLNAKAAEVS
                     SANGTLAVSAKNDINISAGINTTHVDDASKHTGRSGGGNKLVITDKAQSHHETAQSST
                     FEGKQVVLQAGNDANILGSNVISDNGTQIQAGNHVRIGTTQTQSQSETYHQTQKSGLM
                     SAGIGFTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVAGKHYEQIGSTVSSPEGNN
                     TIYAQSIDIQAAHNKLNSNTTQTYEQKGLTVAFSSPVTDLAQQAIAVAQSSKQVGQSK
                     NDRVNAMAAANAGWQAYQTGKSAQNLANGTTNAKQVSISITYGEQQNRQTTQVQANQA
                     QASQIQAGGKTTLIATGAAEQSNINIAGSDVAGKAGTILIADNDITLQSAEQSNTERG
                     QNKSAGWNAGAAVSFGQGGWSLGVTAGGNVGKGYGNGDSITHRHSHIGDKGSQTLIQS
                     GGDTTIKGAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNASAQVTVGYGFSAGGDYS
                     QSKIRADHVSVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAEDKGKNRFQTATL
                     THSDIKNHSQYKGESFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNSASSSVGYG
                     SDSDSQSSITKSGINTRNIQITDEAAQIRLTGKTAAQTKADIDTNVTTDTAERHSGSL
                     KNTFNKEAVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAETAAAEALAN
                     GDMETAKRKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATASPAVSY
                     AIGQHFKDLAGQNANGKLTASQETAHVLAHAVLGAAVAAVGDNNALAGALSAGGSEAA
                     APYISKWLYGKEKGSDLTAEEKETVTAITNVLGTATGAAVGNSATDAAQGSLNAQSAV
                     ENNDTVEQVKFALRHPRIAIAIGSVHKDPGSTLEPNISTIASTFQLNLFPNSEFGGEG
                     GVGNAFRHVLWQATITREFGKDIAVKVGNSHESGEKINYSIRRNLSLDKADEMIDQLN
                     NEIGREIALNTNRLNTKELVGLILETYKNNGFYQAERNSNGNYDVVRKRLSEKDYQNT
                     SNILIHLDNTGAGFKIQQRRKQIRAQISARQWRR"
     gene            17731..17883
                     /locus_tag="ACFM72_000570"
                     /pseudo
     CDS             17731..17883
                     /locus_tag="ACFM72_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         4622 a         3816 c         3868 g         5757 t
ORIGIN      
        1 tatatcgact ctagaagaca ggtattagat actgcctttt cttacaagag tgatggtagg
       61 atggttctct tcaagtcaat caaacaggaa agtatttctt ttctgtctga agatttgaaa
      121 aaggactgga tgtttcacaa ggttaaaact ggggaaaaag atggatatgg ttcagatgaa
      181 atgctgagcg taccccgtgt ctatttggaa atgatgtcgc ggaaaacggg agtcccctac
      241 tccagtattc tttaaattct aagcagaaga cttcttcgtc ggtctttttt tgttgtttgg
      301 tttgcatgga gtaaaactgt acaactgttg aagcataaaa ccagcaagaa ggtaaaaaag
      361 aaagaagcag ttctttggat tttagatgtt accgcaatta gtttcctttc ctaaaatttg
      421 tttaaattat ttgcaatatt aatataaacg agatattaat gatgagaaat caaaaaggca
      481 tactaaatac aatttgtaca aaataattgc agtatttaaa aatgttgatt cgtatatgaa
      541 aagttaaaaa tgccaaaatg tacagttgct aaactgtaaa actgctaaag caacaaaaca
      601 taaaaaggaa tgcagggatg caatcactac atctttttat tccgtaagca tttatgactt
      661 tacggtcaac tgctactcta tgtttccagc ttttcagctc cctattttcg aatattggac
      721 gaggcatttt catcagtgtc gtaatgccgg ccgaaaccct cacaaaccat attggttctt
      781 gtggcagcaa cacctatccg tttgttcaag cgaccacaag agtaacatga ttggctggta
      841 gcattggctt taatctcttc gatatgaact ccatttttag ctgcaccttc tttcagcata
      901 tgcagcagta gggatgaggc aactatcttc tggtggagtt tgttgacttt aatctgtatg
      961 cactgtaggt tgagcagatt caattttttg atacagatta tccggctttg ttcggcaatt
     1021 ctgtttgcga acgtatagta gagctgtcgt cttgcagctt tcaatttgcg gtaggtattt
     1081 taccattcaa tgcgtagccg ctcggtacgt ttgagccaaa tgttatcttc gccatttgta
     1141 ccaatttgtt tttacattag gctgtgtttt agtaatctat tgatttcaat tatttgcaag
     1201 ggaaaagaca attattttcc ggttaggaat aaacctatcc tgttgaatac cttaaagcca
     1261 aatacgccta tcaacaccat attaaaacac agcctttttt aatatagtag acacaatctt
     1321 tccctattta tgaaggtgat cgtttctttc agattcgtat tttaatgctt tctatttcta
     1381 taaaaattga ctagaatagc tcaattataa aaaattgcgc gattttggta tttatcatga
     1441 aaatttccag acctccggaa tttaccctgt tgcaacagga atatatgcag catctcactg
     1501 aaagaatgac gcaaattgcc aagctgctga attcttccgc aaacaatcct gatatagaca
     1561 ttcccgattt tcttactgaa atcaaagatt attcagaatt ttccgtgaca gatgaaaatg
     1621 gaacctacct gcattgggac aaattccgcc ggattcacac ggaagatacg cggatgaaat
     1681 ggcgcgccgt taaggaaagc cgcaaaaaaa tccaaaaacc aattgatttc ccgtttgaac
     1741 atcagttttg gttctgcatt cccgactctt tgcaggcacg gcttcatttg attgacaaaa
     1801 gctgcggcag ttctatcggc acgtctagct tgggtggctt cggcagaagc gagcaaaaca
     1861 gattcttgct caagtctctg attatggaag aagcgattac atccgcccaa ctggaaggtg
     1921 cggctaccac gcgtaaagtg gccaaggata tgctcaaatc gcagcgtaaa cccaaaacaa
     1981 aagacgaaat catgatagtg aacaactatc acttgatgaa aaaagcggta gaattgaaaa
     2041 atacgccgtt aagtgttgaa atgattttgg atttgcaccg cattgctacc agtaacgcta
     2101 ttgaaaacaa ggccgagccc ggacaattca ggcaggatga cgaaatcttt atcgccgata
     2161 tcaatggtaa cagcctgtat caaccaccgc cgcacggaca ggttcatacg ctgatggaag
     2221 aggtgtgtgc gtttgccaat aatacctatg acggcgtgga aaatccgttt atccatccgg
     2281 ttgtccaagc tattatcttg catttcctca tcggctacat ccacccattt ggtgatggca
     2341 acgggcggac agcgcgggct ttgttctatt ggtttatgct caaaaacggc tactggctat
     2401 ttgaatacat atccatcagc cgtcttctga aaaacgctcc tgcccaatac gccaaatcct
     2461 atttgtatgc ggaaactgac gatttagatt taacctattt catctattac caatgcgata
     2521 ttatcaagcg ggcggttgcc gatttggagc actacatttc cgacaaacaa aaacaccaac
     2581 aggaattcaa agcagcgatt gcccaatata ctgaaaagat aggaaagttg aaccaacggc
     2641 aaattggtat cctgcaaaaa gcagtggaag aaagcggaaa aatctttact gcacaagaaa
     2701 ttgccaacca atacggcatc tccctgaata ctgcccgtag cgatttgagt aaactgggag
     2761 aatatagatt cctagtgccg ttcaaatcag gaaatgcttt agagtatgtt gctcctcagg
     2821 atttattgga aaggttagaa aaaaaatagt ttgctagccc agaatgcagc tttaaccgag
     2881 tcaaaatcaa tacagtccgc accttcaaaa agaagctgcg gactgcttgc tttttgctct
     2941 acaaatgatc tttgtagctg atttaaccaa gattgtagca attttgcttt ccaagcaagc
     3001 agggttagaa aattcgatac ttttaattat tggctgtgtt ttaatatgat gttgataggc
     3061 gtgtttggct ttaaggtatt caacaggata ggtttattcc taaccggaaa ataattgtct
     3121 tttcccttgc aagtaattga aatcaacaga ttactaaaac acagccttac attattgggg
     3181 tgactatcct gtaaaatatg tcctaaaacg tggaaaccac ttttgctctg ctaaatttta
     3241 aggaatcttt atgttacata taccccccaa cggaacctgt tcgatatgtt agcagtattg
     3301 tagccttaaa cgtgcatagt cctaacggta caggcgactg gcatagtgca aaggcattga
     3361 gtgatcgggc ttaccctgaa aaattttata tttacggtga aaatcaagag cgaaatacca
     3421 atcatttatt tggtgataat ggcattattg atgggacgga tcgactgaac aaaatgggtt
     3481 atttccctga aaacatccca gtttggctcg cagatcaccc ccgtgcttgc gtggattatc
     3541 tttacacagc agtgttacaa actggctcaa tcggtcgggt gattttagat gattggtttc
     3601 caagcgatga agacaagcaa tcagtttatg acttacttaa ccaaatcgaa ccgcacttga
     3661 atactcaaga atgggagaat ttacagctat ggaaacgcaa aaacccaata atgtaatgct
     3721 aaccgaacga gataaaaggc acgagaagcg gtattactga atttcatccg caatacgcca
     3781 tgtacaatta aatcagcaga tgtgtctaaa cgtaccgctg ttcccgtttg aaagaatttt
     3841 tcatgatgaa gtctatcctc accgtatccg gaaatcgtat gcgtaaaccc agaatcacct
     3901 atttggatgt ttgggcaaac gatgaaagaa tcggtacttt ggaaaagggg gccatgtatc
     3961 ggttcgcata cgacaatccc aattcttcgt tgctgggcct gcattatcaa gacagaagca
     4021 aggtatatat cagcaacaat atgccgcata tctttgcaca gtattttccg gaaggctttt
     4081 tggatgcaca catcacaagc aaatatgctt ttcatgatgc gccttttgaa gacaatgaga
     4141 tgctgcgctt ggcaattctg tgcagagaga ctttgggtcg gatacatgtg cgctgtaatg
     4201 acccgctttt taatgaatgg attgacgggt tggagatgaa aaatccaaga atattgactg
     4261 aacgggattt gctgggcata aatgcccgac aggtttttca gcaatatatg gcagaaatct
     4321 tccatcacgg ccgtttcgtc agtgtatccg ggatacagca gaagatgtcc ttagaggcca
     4381 tccgcagaaa taccaagcaa actgcctcat atattgccaa aggttttgat gcatccgaat
     4441 atccttgctt ggctgccaat gaatttttat gcatgcagac catcaaacaa gccggcattg
     4501 ccgttgcaca gaccagcctg tcggaagatt catcagtctt attggtacgt cggtttgatg
     4561 tcagtgaaca gggttatttt ttagggatgg aagactttac cagtctgcgc cagtattcgg
     4621 tagaagataa atataaaggc agttatgcgg ctattgcaca gattatccga cagatatccg
     4681 gcagaccaga tgaagattta atccatttct ttaatcagct tgctgccagt tgcatattga
     4741 aaaacggcga tgcacacctc aaaaattttt cagtactcta tcatgacgaa tacgatgttc
     4801 gtcttgcacc tgtctatgat gtattggata catcaatata cagggttgga acacaaggaa
     4861 tttttgatgc ttatgacgat acgctggcat taaacctgac taaccacggt aagaaaacat
     4921 atccttccaa gaatacattg ttggattttg ctgagaaata ttgcgatttg ggaagagaag
     4981 atgcatcctt tatgatagat acaatcgttc aagctaaaga acaggttctt gttaaatact
     5041 cggatgtatt gcgtgagaat gaatggttgg cgcagaagtg gcattttatc ccggatgaaa
     5101 atgaagaagg tctaccgttt acattccggt agctgccgct gtcagagatg gccggtcgac
     5161 tttcaccctg aaaatcactt catcttatgg tgtttgaaac cgagaaatta gaagaatcgt
     5221 attcggtagg agatatactg ggaagattgg aaaactggta aatcactcta ttgattgagt
     5281 tggcggccta tatgtttaat gtaggcaaac gagaaggaat catgtatttc atgattcctt
     5341 cttaaattcc tgtgtcaatc taatatcaaa acacagccat ctcttaccat aatcatgata
     5401 ggtgttttat tatgaaaagc tatatctata gttaccgttg atttgactat gccgttttaa
     5461 aacgtatagc ctacctgaaa accgcttgcc catttccttg attggaaaaa ttcgggcttt
     5521 ttcaatgcgc ggccggtaaa tatatcgtaa tgcaggttgc cgccaagctt tatctgcccg
     5581 cgtatcccaa ttgctgtgcc gactagagtt tggcccgata accatttggc ggattgtcct
     5641 gaaacatgtc ctacatcagc cccaagataa agctgatggc ctggtttaaa ttgccagctc
     5701 aaatcgttgc gccaatacca tccccgctcg gcagacaaac tcatttcacc gtcgaagcca
     5761 cgtacggtgt ggtgtccgcc gatagccagt ttgtcttgcg atgttagcgg ggttttgttc
     5821 cattgtgcat gaacggatgt gtcataggca aatagctgtt taccgatttg aaaaggagta
     5881 tttacatcag ccgatgccgt ccaaattttc atacgtgacg tgccttcgcc aaaggcttct
     5941 tcaggcgcgc gcagagcatc tttcatgccg gtgccgcgtt tatatttcaa cttaaaatct
     6001 gccgtactgc gaccgatata ttctttgtgg gaaagttctg ccaaccaacc cgcagtttta
     6061 cgccgttgta cagtcagttc ggcatcatca atgtaacttt ttgtttccct catccacagt
     6121 tttacaccga gataggtttt gcgtttggca tcacgataca acaggcggtt gaagccgaaa
     6181 tcagtattgt aactttttcc attatagtca tagacttccg ataatccgga aactgcctga
     6241 tggtaacggt agccattgtg attgaatgcc catgtccatt taccgaaagg ggctgaataa
     6301 tgtacggcgt aattgtttga tccgccttct ttgcgatggc cgtcaaaact ttcctcatcg
     6361 ggcgtaccgc caatcgaacg tccataattt acatagaaca tatcactcag tcccaaagga
     6421 ttgtcggcag agaaagtgat atttccttgg tattttcctg tcgcctcact acccgaatta
     6481 tccatcccca cactcacacg gtagggcagc agacgttgcc gccattgcac cacgacatca
     6541 ctttggtttg gttctccctc tacgggaacg atttggagat cggcttccgc agtcgggaga
     6601 cgtttgagat tttccagtcc ttgttccaaa tcacgcagat tcaacagatc gttcgagcgg
     6661 gtgggaaatt tgttctggaa tgctgcaata cgtcctgcat gggtttgatc atcgttagac
     6721 cgatcgattc gtatggagcg cagatagctc ggtatcaggg ttaattgaag cttgccacta
     6781 ttcaaatcct gtggcgcagc caagatacgg gtcgtggtat atcccctgcc gatcaaagca
     6841 ttttgtgcta aggacatgat ttgattaatg ttgcccgcat gcagacactt gccagcctga
     6901 aaacccgttt cgcgcaaggc acgttttagg gcaaactgaa accgagcatg gtgttcgcct
     6961 tccaacacca cttcgttaat ggcaaaacac ggttggctgc tgtcatcgcc catcaactga
     7021 ttaaccgttt cccccgtgtt tttttgatgc aaacgcacat cgctttcagg ctgcatggtt
     7081 tggcgcaact gctcttcgcg ttggcgttgc tgaatatctt gctgcatacg gatttcggca
     7141 gggttggggg aggccaacaa agtagcagga gcaatgatac ctgccaataa gcagcaccaa
     7201 gacaaaaagc gaatattagg caaataggat aaaggaagtt tcatggcatg gtcgcaaaat
     7261 caataaaatc atcaatgggc attcaataca cgattgcatc aagttttaaa agttaaaatt
     7321 ctcaaaccct tatcgctccc tttatgatac aaggcgcgta ctgtcgtact aggaaataac
     7381 tggcgcacag ctgagcgcat ttgatgactg tgtcccaatg gcgcaaacca ttgaatcagc
     7441 caaatattgt cgccacagtt ccaatcgctg ttgtcacgca aatggcggtc agattctaaa
     7501 taatgcgcct gcgccacttc atcaaaataa gcccatgaga tataaccgat tggttgggta
     7561 cccttgcaaa acaaagcgaa ctgcccgttt tttaacacag gcaatatata cgtcatcatc
     7621 tccacaatag gtacttggcg atgcgtaggc gactgatacc atagccaagt gatggcaccg
     7681 agtgcttcgc tttcgttcca ttgttcattg gggtagagtt taggagagat gatgtttaag
     7741 ggtggagtga tgggcatatt ttaagttagg gttcgtgttg gttaaaacaa aaaatggttt
     7801 cagcctgaaa tgaaatattt cacgttaaaa catagtttta gcacatgaga ctgaactgcg
     7861 tgggcaacga gttgcccacc ctaccatgta acagttcgca ttaattgcac aggctacgct
     7921 ggttattgca caaacaaatg accatactgc ttatctttac gaatattgta tccaccgcca
     7981 tggtgaatac actgataaga aatatgttgc ccaatttcac taaatgagac ttcggtaata
     8041 gatttatatc ctaattgatt gcctaattca tgcaaaacaa aggtgagatt ttcagtttca
     8101 catgtgtcaa cggctttctc ccagcgtgga ttaagtttgg agcaattcca gtctgcacaa
     8161 ctaccccaaa aagggcaagc tgttagcatt gttgagcaga atgatattag cactaaatta
     8221 gaaagggttt tcttcatatc tctctccttt ataagttatt gtgtgttaca acataattag
     8281 gatttttaat gcactgatag taaatatcca ttactgtttt gtttttgtac ttttcttcat
     8341 cattctcaaa atagatattc agttttacta atgccttatc aaggcaattc ataatttctt
     8401 ggtgttcctt atcagtagtt gtccagttac tactagtacc gtacaaggct gtaccgacta
     8461 cgacagtacc taataaggta gtagcgcaag ctgttagaca aaaaacagat gaaagaaaca
     8521 gagaatattt agaaagcttc tttttcatat ttttcattat cttttgtttt gtttggttct
     8581 accagtatgg gtttagattt gttaattggc ttaccttgag cgtcatattc aacttcaccc
     8641 catattttta catagtcatc aaattctttt gtacctgctt ttggcacctc cgcaaaataa
     8701 ctgctatgcg aatagcacaa ccccttacat gtaccttgtg tggtgtcatt ggttcctagc
     8761 aagaaaggta tccatttgtt ccccacaaaa tctttatcat gcacgattga gtaggatccg
     8821 ctgttataag ttttgccgtc tgcacccgta taggtatagc cgtttttctg taaaacatcg
     8881 gcgtaatcat tctgcacatt tgtggctgta ccatagaaac gtgcttttct gattggggca
     8941 atgccatttt gtttttgatt gtttacccaa tcttttaagg aaacgcttgc tgtaattccc
     9001 ccacgactgt gattactggt atcaaccgac cagccgttac ccattttttg aacctctcga
     9061 taaatatctt gattcagttt ttctgaattg gttttgggta aatagccttg gaacacttta
     9121 ttatttaatt ggtcgtaacc gacatacatc agttcagaaa caagacttga accgagccat
     9181 aaaaaatctt ttattttgtt attagaatca gatttatatt tccctgttgg aggattcatg
     9241 actgcaataa caccactacc gtttgtacta ttacgatttt gttttgctgc gttgcttaat
     9301 gaatcttctc gattattgaa aataccagga ttagacacag taataacttt gccatttgtg
     9361 tcttgaatgc ttgccagttc ttccttgctt aaatcattca atgaccaaat ttgtctggta
     9421 tcaaaggata ctttacctgt tttttcatct attatcttct tatggaacca catttcttta
     9481 ggtgcagttg cagaccttac cgctctatcg gcttgggttg tggcaaacat actccaagcc
     9541 atatcagaac tccctgctcc ccaaacgagt cctaatcctg aatcctaggc ggtaatgacg
     9601 aaggatagtt ttacaaaagt ttcggcctac aatttatagg tttataataa taaaaatatc
     9661 catcaaaaaa atgtgatttt tcttttttta aaagttgcat cttgccattc ttgtaatcac
     9721 attcgtaata ttcaacattt ttcaaatctg aatcaaatag atattgaggt aaaacattcc
     9781 cttccttatc tagttctatt aattcctcaa aaactatctt acttttatga taaaaaacaa
     9841 ttttttggaa atctgaattg attatataca gttttacata atcccaatta aaattcgtta
     9901 tatcactaat taagaattct tttttattat aattaaaact tatttttctt attacattct
     9961 tttcaaatat aaagaaaata acaatagtga ttaataaaga aaatatataa agtatatttt
    10021 tattcatctt ttatcttctc cattgtctgg ctgaaatttg tgctctgatt tgttttctcc
    10081 tctgctgaat tttaaatccg gcaccagtat tatctaagtg aatcaatata ttgcttgtat
    10141 tctggtaatc tttttcagat aatctttttc ttacaacatc ataatttcca ttactgtttc
    10201 tttctgcttg ataaaaacca ttatttttat aagtttccag aattaatcca actaactctt
    10261 ttgtgtttaa cctattggta tttaatgcta tttctcttcc tatttcgtta tttagttgat
    10321 caatcatttc atctgcttta tctaatgaaa gattacgtct tatagaataa ttaatttttt
    10381 ccccactttc atgactattt cctactttaa cagcaatatc tttgccaaat tctcgtgtga
    10441 tggttgcttg ccataaaacg tgcctgaatg cattgccaac tccaccttca ccaccaaatt
    10501 cactattagg aaataaattt aattgaaaag ttgaagcaat tgttgaaata ttaggctcta
    10561 atgtagagcc aggatcttta tgtacagatc caattgcaat agcaattcta gggtgcctaa
    10621 gagcaaattt cacttgctct acagtatcat tattctccac cgcactttgc gcattcaggc
    10681 tgccttgcgc tgcatctgtt gcgctgttgc cgactgccgc acccgtagcc gtacccaata
    10741 catttgtaat cgctgttaca gtctctttct cttccgccgt taagtcgctt cctttttctt
    10801 tgccgtataa ccatttgctg atgtaaggcg cagccgcttc cgacccgccc gcactcaatg
    10861 ctcctgctag agcattgttg tctcctactg cggcaaccgc tgctcctaat accgcgtggg
    10921 caagaacgtg tgcggtttct tgactggcgg ttagtttacc attcgcgttt tgaccggcta
    10981 aatctttaaa gtgctgtcca atcgcatacg atacggctgg cgatgcggta gccgcagcga
    11041 tgcccgctcc gctttgggtc ggcgcagcta aacctgaggc taacatgttg agaatgactt
    11101 tgccttgttg ccaattatct gcttttgctg ccgcatcttg agcttcatgg gctttgcgtt
    11161 tggcagtttc catatcgcca ttggctaatg cctcggctgc tgctgtttcg gctgcttctt
    11221 tgtctgcttt gagtttgtct aaatgttggt taatctcggt attggcttgt tgaacatttt
    11281 tactaaaatc ttggctgacg gttctttgta aatccagttc actttgcacc gcttctttgt
    11341 tgaaggtgtt cttcaagctg cccgaatgtc gttcggcggt gtctgtggtt acgtttgtat
    11401 caatatcggc tttggtttgt gccgctgttt tgcctgtcag ccggatttgt gcggcttcgt
    11461 cggtgatttg aatgttgcgg gtgttgatgc cgctttttgt gatgctgctt tgactgtcgc
    11521 tgtcgctgcc ataacccact gatgaacttg cgctgttttt atcggctacg cttgtcaggt
    11581 gtttgttttg aggtttattt tgtgcgccct gtcccagtgt tttgccgctt atggacgcac
    11641 ttgcgcccaa tccaaaactt tcgcctttgt attggctgtg gtttttgatg tcgctatggg
    11701 tgagggtggc cgtctgaaag cggtttttac ccttgtcttc tgcgctttgg gtactggtga
    11761 tgatgccgcc tttgaggtct gtatggtttc cgaccttgat ttgatagccg tcttctccgg
    11821 cataaatacc gctttgctcg gttactgaaa catggtcggc tcggattttg ctttggctgt
    11881 aatcgccacc ggcactgaag ccataaccta cggtaacttg tgcactggcg ttttgttgtt
    11941 tgctttgata ggtttctcta tcttgtacgc tttgaatact taggtttttg gcattgactt
    12001 gtacgccttt gccgcgtact tgcgcgcctt tgatggtagt gtcgccaccg ctttggataa
    12061 gggtttggct gcctttgtcg ccgatatggc tatggcggtg ggtgatgctg tcgccattgc
    12121 cgtagccttt gccgacattg ccgcctgcgg taacgcctaa tgaccagcct ccttgtccga
    12181 atgatacggc agcacctgcg ttccagcctg ccgatttgtt ttggccgcgt tcggtattgc
    12241 tttgctcggc tgattggagt gtgatgtcgt tatcggcaat caggattgtg cctgctttgc
    12301 cggcaacatc tgagcctgcg atgttgatat tggattgttc tgctgcgcct gtggcgatta
    12361 atgtggtttt accacctgct tgaatttgac tcgcttgggc ttgattggct tgaacttggg
    12421 tggtttgtcg gttttgctgt tcgccgtagg ttatggagat gctgacttgt ttggcattgg
    12481 ttgtaccatt ggctaagttt tgtgcactct tacctgtttg ataggcttgc cagcctgcat
    12541 tggcagccgc catggcatta acgcggtcgt ttttgctttg tccgacttgt ttgctgcttt
    12601 gtgctacggc aatcgcttgt tgtgccaaat cggtaacggg cgaactgaat gccaccgtta
    12661 ggcctttttg ttcataggtt tgggtggtat tactgtttaa tttgttgtgt gccgcttgaa
    12721 tgtctatgct ttgggcatag atggtattgt tgccttccgg gctggaaacg gtactgccga
    12781 tttgttcgta gtgtttgcct gcaacaatgg tggtatcgcc tttcaagctg cctacggtac
    12841 tgcctgtatg ttcgttgctt tgggattggt tttcttgtgt gtttgtcttg ctgccaatag
    12901 tgaagccgat acctgcactc atcaatcctg atttctgggt ttgatgatag gtttcgcttt
    12961 ggctttgagt ttgggttgta ccaatgcgaa catgattgcc tgcttgaatc tgggtgccat
    13021 tatcggaaat aacattgctg ccaaggatgt tggcatcgtt tcctgcctgc aatacaactt
    13081 gcttgccttc aaaggtgctg ctttgggcgg tttcgtgatg actttgggct ttatcggtaa
    13141 tgactaattt attgccacca ccgcttctgc ctgtgtgttt ggacgcatca tcaacatggg
    13201 tcgtgttgat gcctgcgctg atgttgatgt catttttggc agacacagcg agtgtaccgt
    13261 ttgcgctgct gacttcggca gctttggcat tgaggttatt ccctgacaat agggtaacat
    13321 cgccttttgt ttgaatgctg ctgccgactt cgttcgttga accgcgaata acatggttat
    13381 cggcatcaaa atgggttgct tgatgtttgc tggtttgtac cgtatctagg ttaatgtcgc
    13441 gccctgcttg cagccgggtt tgcccttgct ctgattgatt gctgatttga ccggcaatga
    13501 tgttgatgtc ttttcctgcc tgcgctgcta aaacaccttt ttctttgcct gtgatataaa
    13561 tacctgccat tcggtctagg taggtgctgc tgccttgtgt attttgactg ctggcggtgg
    13621 tgctttggct gttgatgttg ttgcctgcgt tgagcaataa tgtctgttcg gcagaaagca
    13681 tgccgccaat attattgatg tcttgtgtgg ccgtaaccgc tgatttttgc gcatgaatac
    13741 gcccaccgat attgtctagc gtatcggtat tgataataag cgcattgcgc cctgcaatcg
    13801 tgcctgagtt tttcaggctg cctgaaacat tgatttgtgt attgctgcct gacaacaatg
    13861 cacctttacc gtctatgtcg ccatttttaa cgcgtacata aacctgtggc accaatacgg
    13921 tttgtgtgcc gccatcagga agcttaactt ctttttgtac caaccaaaca atatcgctgg
    13981 tcagttgcgc tacttgctcg gcacttaatg caatgccaac gctgagattc atcgaacgtg
    14041 ccgcagtcgc gccattatcc attaaggctt taaattgttc ttcgtcgttt tgataaccgt
    14101 ctaaacgacg atgccctgtc agctctgcga tttgttcatt gattaaacgt tgctcgtaat
    14161 aaccatcacc caaacgttta tgtaaattgt ttgggtctag tttgaggctg tccagcatat
    14221 agtcactacc caaccattga cggtagttgg caaagcgtgg atcggtttca acaagatagc
    14281 ctttattgac aggattgata atgtataagc tgctgctggg taatggggta aaagaattgg
    14341 acgtataggg tagcgaaata ccgttgcttt gcggcaactc agtgccttgg ctgggcgcat
    14401 gatggcttaa tgctttgcga tgcgattcat aggcaaatga acccagtgaa atgttgcgtg
    14461 tgatttcctc cggcaaagtg taattttgtt cgctatgtcc cgttgagtct cgtcctttat
    14521 gtttctcacg ccaatagctg tgtaatttgc cattttcact gaatactttc ttttcgccaa
    14581 aggtttgctc gttatgcaaa ccgtcttttt ctgtttgtac aatgagattg ccaccagcaa
    14641 tgatttggct atcggtatta aatacttctt taccatcaat ggttaaatca ttacctgaaa
    14701 tgattttggc tggcgcagtt tgggtaactt gggttttttg ggtgactttt tcataatcgt
    14761 atttatgcca attttcatgc gccgctccat caggggtgcg taagtggtct gattcatcgt
    14821 tatagacaga ccagcctaat tcatgttgcg tgccttctcg caataattcg tgtcgtccaa
    14881 atgcttcgtg atcaacaata tgctcgcgcc ctgtttctac caactgcgtt ttcaaatgct
    14941 cattggtatt gtgcagcttt tctacaccta aacgcatttt gcctgcagct tcaatggttg
    15001 cgccggcatt gtgtatcctt tgggctttgc ctgtggcttg gccattggta tctaatgcgc
    15061 cgccaaccgc catatcgtta ccgctgtaaa tcagactgtt ttcacggttg tttaattgtc
    15121 cgatgcctaa attcaggttt tcacgtgccg caatggcggc acctgtaccg ttttcatctt
    15181 gattgtctaa gcgggtagcc gcaatagcga tattgtcgcc ataaatccga cctgtaccga
    15241 tattattcat ttgcccggct tggattttgg tttgttgtcc gtcaatcaag cctctattgg
    15301 ttaaattgtg ctgcgtgcca atgtctgtcg taccgccgga ttgaatgttg ccttgtgctg
    15361 cattatcaag gttatttgct ttaatccgaa tgcgttttcc tgcttgcaaa gtatgtgaat
    15421 ttttcaggct gcctcgtgta ctgagcgaca attcattgcc cgccacgata ttgcgttcta
    15481 cataaaaatc atcttgtaac gcaatatcca gtttattatc agcggcaagt gtgccgttgt
    15541 tggataacga ttttgcctga atagcaacat cacggcctga ttgtatcgtg ccattcgtat
    15601 tatcaatgac agcggtagat tgctgaccat cgtgaataat cagttgttga ttggtcgcta
    15661 tttcgccatt ttgattgttc aggctgcctg aaacggctaa atccgctatt tctgctgata
    15721 ataacttgcc atgagcgtta tccagttgat cggtttcaat ctctaactgt tggcgtgttg
    15781 tgatgttgcc attttgatta ttcaggctgc cggcttgaat gtggaccgca tcactgataa
    15841 ttgttccatt gtgattgtca aacgccgaac cttttgcatt taactgatga atgtctattt
    15901 gtcctgcatt atttaaacct tgttgcgcac taacatctgt ttgaccattg gcaataatac
    15961 tgcctgaatt atccagtgca ccatgagtgc gaattgtccc atcagcaaag gtaggcgcag
    16021 ttatgtttga tatagaaacg gttgcagtac ccgtacctgt tgccgttgtt ggtgtggtag
    16081 tggatgaatg gaaagatgca ttgtaactat tgccggtttg attgcttgaa ccatttgacg
    16141 cggttggtgc ggtatcttgt aaacccatgc ggccacggtt atccattttg ccttgtgcat
    16201 caatatggag tttttgtgaa cctgtttgag agagtttgcc ttgattatta agtgtgtcgg
    16261 tatcaatagc caaacgagcg gcttcaatgg tgcctgatgt ttcatttttc aggctgcccg
    16321 aattgtgaat caatatttcg cctgaggaca ataatgtgcc agtgttttga atcgactgac
    16381 tgtgaatttg agtgccttgt tgcgataccg ccgtaccgct gttttcaacg ccctgactgc
    16441 ggatattgac tttgtgttcc gctgtattat ccgtatcttt cgcattggcg gcagccatcg
    16501 tgccactatt gactaaacgg ccatttgcat caatcgccac attaccggaa gaagcaaaca
    16561 actgcccttg attacgaatg cctgcttgct cggccgtact gatcaaggtg attttgttgg
    16621 catacatacc tcctaatttg cctgtatcaa tcgcaaataa agggatatgt gtgccgttgt
    16681 tggctgtatt gtttgacgta ttggcagcag cattattgag aataggcgaa tgtgcattac
    16741 ctgttgcgac cacatcgttt tgtcccgcga cgacacgaac atcttgtccc catacgggtg
    16801 catcaatttt ggaatgataa ctgagaatac gtgtgaaatc ggtatcacgg gcatccaaac
    16861 cgtgtccggc gattacaaca ttgccttgcc ttatcttaaa gccgctaagg tctcctgctt
    16921 gatattgcgg ttggcctgtc gtcaaagtgg cacgggaagc attgataaaa ccaccaccat
    16981 tgactgcaat ccctgccgga ttggcaataa cgacttctgc acgtcgtccg cccacttcaa
    17041 tatagccatt catttgtgaa gaatggctgc tgttgatttg gtttacaacc acacgtgctt
    17101 cgccccttgc caaccaagga ttaccttgaa tccaaccgcc tagctgtgtt tgggtgttgc
    17161 tgcggctgtt gtttaaaatc gccccgcgat tacccacatc aaactgggcg tattgattaa
    17221 cagaaacccc tgccgaagta ggggtttgaa tattgacttg cggtatgccg ttacctgttt
    17281 gcagaatcgt ggcttgttga gttttaggag cagctttatc agcaataatg ccatcagcaa
    17341 aagcaatatt ggccgtacct acagccaaac ataaagaaaa gcccaataaa gaaaaagaaa
    17401 agatatttga acgacaaaca ggtgcatgag tagtaccaaa aggaacagat ttcacatgag
    17461 cgctgcctga atcactatcg gcacagcttt taccttcgcg cttggtagtt tcagcaacgg
    17521 ctaccacagc cccacgtttg cggttgaaaa ttacacgata gagagtttta ttcatgattt
    17581 cagttatttg atttttatag agttattaga aaaaattgga tagtctgacc attctagatc
    17641 aaggattttg gcgagtcaat taccgccatt ttactgccat ttgtttatta aattagggac
    17701 tttactagat aacggttaaa aatcccattc gaacgaaatg gcaaggttta taccgtcgtt
    17761 gtccctaatg cgcaatcagc aacattattg ccgattatcc gagagaaagt taagtctgat
    17821 ggcattgtgt atacggatac ctttcgtaat tatgatgtac ttgatgtcag tgaatttagc
    17881 catttacgca agttttccag tatttgactg gcaatttaaa acagtcggat tttgtcccat
    17941 ttgttggcca agtctttact tgcttggccg tttgaattta aaaagcagtc tttctacttt
    18001 ccgacctttt tttctgttgt aaggtctata atccaatagc attcccaaag agcattttgg
    18061 acg
//
LOCUS       DAXHRP010000021        17023 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.021, whole genome shotgun sequence.
ACCESSION   DAXHRP010000021 DAXHRP010000000
VERSION     DAXHRP010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.021"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(108..1277)
                     /gene="metK"
                     /locus_tag="ACFM72_000571"
     CDS             complement(108..1277)
                     /gene="metK"
                     /locus_tag="ACFM72_000571"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HFC6257183.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1460..1570)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1623..2519
                     /locus_tag="ACFM72_000572"
     CDS             1623..2519
                     /locus_tag="ACFM72_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC6257184.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLANVKGVKTLFFCCERLPDGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2563..3627)
                     /gene="tsaD"
                     /locus_tag="ACFM72_000573"
     CDS             complement(2563..3627)
                     /gene="tsaD"
                     /locus_tag="ACFM72_000573"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HFC6257185.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRFEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVK"
     gene            complement(3743..4930)
                     /gene="ccsB"
                     /locus_tag="ACFM72_000574"
     CDS             complement(3743..4930)
                     /gene="ccsB"
                     /locus_tag="ACFM72_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HFC6257186.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4923..6875)
                     /locus_tag="ACFM72_000575"
     CDS             complement(4923..6875)
                     /locus_tag="ACFM72_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HFC6257187.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTVSREGGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKGAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7152..7775)
                     /locus_tag="ACFM72_000576"
     CDS             complement(7152..7775)
                     /locus_tag="ACFM72_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC6257188.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7981..8610
                     /gene="yihA"
                     /locus_tag="ACFM72_000577"
     CDS             7981..8610
                     /gene="yihA"
                     /locus_tag="ACFM72_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HFC6257189.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8731..11127)
                     /locus_tag="ACFM72_000578"
     CDS             complement(8731..11127)
                     /locus_tag="ACFM72_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HFC6257190.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11279..12394
                     /gene="pilM"
                     /locus_tag="ACFM72_000579"
     CDS             11279..12394
                     /gene="pilM"
                     /locus_tag="ACFM72_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HFC6257191.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12397..12996
                     /locus_tag="ACFM72_000580"
     CDS             12397..12996
                     /locus_tag="ACFM72_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HFC6257192.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12997..13644
                     /locus_tag="ACFM72_000581"
     CDS             12997..13644
                     /locus_tag="ACFM72_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HFC6257193.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLNAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13662..14207
                     /locus_tag="ACFM72_000582"
     CDS             13662..14207
                     /locus_tag="ACFM72_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HFC6257194.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14226..16583
                     /gene="pilQ"
                     /locus_tag="ACFM72_000583"
     CDS             14226..16583
                     /gene="pilQ"
                     /locus_tag="ACFM72_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HFC6257195.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSEPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQQ
                     AAAPAKQQAAAPAKQQAAAPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQHDHI
                     IVTLKNHTLPTTLQRSLDVADFKTPVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPG
                     YFTFQVLPKKQNLESGGVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASD
                     SVNGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKD
                     IADLGALYSQNFQLKYKNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIV
                     TDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGKKKLKNDTS
                     AFGWGVNSGFGGDDKWGAETKINLPITAAANSISLVRAISSGALNLELSASESLSKTK
                     TLANPRVLTQNRKEAKIESGYEIPFTVTSIANGGSSTNTELKKAVLGLTVTPNITPDG
                     QIIMTVKINKDSPAQCASGNQTILCISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLT
                     KVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRIMGTAGNSLRY"
BASE COUNT         4598 a         4847 c         3887 g         3691 t
ORIGIN      
        1 atctgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatataaaa
       61 atgccgtctg aactgttcag acggcatttt tgattttcaa accggaatta cagccccgct
      121 gccgccctca atgcagcagc tttgtcggtg cgctcccaag tgaactcagg ttcttcgcgg
      181 ccgaaatgtc cgtaagcggc ggatttactg taaatcgggc gcaagagatc gagcatttgg
      241 acgatgcctt tggggcgcag gtcgaaatgt tcgcgaacta aggtaatcag tttttcctcg
      301 ctgattttgc ctgtgccgaa agtgtcgatg gaaatcgaag tcggttcggc aacgccgatg
      361 gcgtaggaaa cttggatttg gcattgggtt gccaaaccgg cggcgacgat gtttttcgca
      421 acgtagcggc aggcgtaagc ggcggaacga tccactttgg acgggtcttt gccggagaac
      481 gcgccgccgc cgtgcggagc cgcgccgccg taggtatcaa cgatgatttt acggccggtc
      541 aaaccgcagt cgccttgcgg gccgccgatg acgaagcggc cggtcgggtt gatcaggtat
      601 ttggtttcgt cggtcagcag ttcagacggc aggacgggct tgataatctg ctcaatgacg
      661 gcgtttttca actcttcata accgatttcc gggtcgtgtt gcgtagagag gacgacggta
      721 tcaatgcgtt ttactttgcc ggattcgcta tcgtaaacca cggtcagttg ggcttttgcg
      781 tcgggacgca gccaaggcag gaggccgtct ttgcgtaatt cgctttgacg ctgcatcagg
      841 cggtggctgt aatagatggc aaacggcatc agggtcgggg tttcgtcgca ggcatagccg
      901 aacatcaaac cttggtcgcc agcgccttgg ttcaagtcaa tgccttcgcc ttcgttcacg
      961 ccttgggcga tgtccggaga ttgctggtcg tagtacacgc cgaccgcgca gccgttggca
     1021 tcaaagccca gctcggagga gttgtagccg atgcgtttga tggtttcgcg tgcgactttg
     1081 atgtagtcca cttgggcggt ggtggtgatt tcgcctgcca atacgcacaa gcctgtgttg
     1141 accaaagttt ctgcggcgac acgcgctttg gggtcttgcg ccaagatggc atccaaaatc
     1201 gcgtcggata cttggtcggc aactttgtcc ggatggcctt cggataccga ttcggaagta
     1261 aacagatatt cgctcattga gattttcctt gaaaaacaaa ccatcttctt cagacggcat
     1321 gttgtatgaa cataatgtcg acagcgggaa atatagcaaa atttccctat tcataccatt
     1381 cagttgagaa atattcccat ttgaatggca ctttggaatc tctgcccgta cgtttcttac
     1441 aggcaaaaaa attcccgcat caagcgggtt tggattgctc tggtgagcca catcggcttt
     1501 tcaaccgtcc accttacttt tccttttgaa aagcaggttg gcatggaatt cccaactctt
     1561 aatgcagcgc ggatggtagc agaaaagcct ttccgccgca atacttccct ttttcagacg
     1621 gcatgtttcg tttacaattc gggctgtttc cccctttgcg aaccgccatg cacatcctgt
     1681 tgaccgccct gctcaaatgc ctctccctgc tgccactttc ctgtctgcac acgctgggaa
     1741 accggctcgg acatctggcg ttttaccttt taaaggaaga ccgcgcgcgc atcgtcgcca
     1801 atatgcgtca ggcaggcatg aatcccgacc ccaaaacggt caaagccgtt tttgcggaaa
     1861 cggcaaaagg cggtttggaa cttgcccccg cgtttttcag aaaaccggaa gacatagaaa
     1921 caatgttcaa agcggtacac ggctgggaac atgtgcagca ggctttggac aaacacgaag
     1981 ggctgctatt catcacgccg cacatcggca gctacgattt gggcggacgc tacatcagcc
     2041 agcagcttcc gttcccgctg accgccatgt acaaaccgcc gaaaatcaaa gcgatagaca
     2101 aaatcatgca ggcgggcagg gttcgcggca aaggaaaaac cgcgcctacc agcatacaag
     2161 gggtcaaaca aatcatcaaa gccctgcgtt cgggcgaagc aaccatcgtc ctgcccgacc
     2221 acgtcccctc ccctcaagaa ggtggggaag gcgtatgggt ggatttcttc ggcaaacctg
     2281 cctataccat gacgctggcg gcaaaactgg caaacgtcaa aggcgtgaaa accctgtttt
     2341 tctgctgcga acgcctgcct gacgggcagg gtttcgattt gcacatccgc cccgtccaag
     2401 gggaattgaa cggcgacaaa gcccatgatg ccgccgtgtt caaccgcaat gccgaatatt
     2461 ggatacgccg ttttccgacg cagtatctgt ttatgtacaa ccgctacaaa atgccgtaac
     2521 gaaaataaaa atgccgtctg aacaatttca gacggcattt tgtcatttga cgatttccga
     2581 cagcggccag cgcggacgga cattgaacgc accgacctcc ctgcccttgc ccaggtgcat
     2641 cgcaccggca aaggcaatca tggcaccgtt gtccgtgcag tatgccgtcg gcgggaaaaa
     2701 cacgctgact ttttcggacg gatgtttcgg cttgcctttg ggggtcggga tttgcaccgt
     2761 catgttgccg aaagtttcac ggagcttgcg gtttgcaccg accccgccgg cgaccactac
     2821 ggttctgaac cctgtctgca acagggcttt tttcactttc gccgccaaca catcgactac
     2881 cgcatcttga aacgcacggc agatgtcgtt gcgtgtctgc tcaggaatgt catccgcccc
     2941 gttttccgcg cgcactttct cgacggcggt caatacggcg gttttcaaac ctgaaaaact
     3001 catctgcaaa tcgtcggaat gaatcatcgg gcgcggaaaa acaaacgctt cgaacctgcc
     3061 cgattccgca agttccgaca gtttcgcacc gcccggatac ggcaagccca gcagtttcgc
     3121 cgttttgtcg aatgcctcgc ccgccgcatc atcgacgctc tcgcccaaaa gcgcgtagtc
     3181 gcctatgccc ctgaccgcca taatctgcgt atgcccgccc gaaaccaaca gcgcgacaaa
     3241 aggaaagtcg ggtttttcct ccgccaacag cggcgacagc agatgtcctt ccaaatgatg
     3301 gacgggaata acaggcttgt ccaacgctaa agccagcgcg ttggcgtagc tcgaacccgc
     3361 cagcagcgca ccgcccaaac cgggcccctg cgtaaaggca accgcgtcaa tgtcgccata
     3421 cgatgcgccc gcctgcgcca aacagccttc cgtcaacgga acaaggcggc ggatatggtc
     3481 gcggcttgcc agctccggca caaccccgcc gtattcggcg tgcattgcca tctgcgtgtg
     3541 caggcagtgc gcccgcaatc ctcgttcggt gtcatacagc gcaacgcctg tttcgtcgca
     3601 agaagattcg attcccaata ccaacatggt ctgatgccgt taaaaactga aaaacgtatt
     3661 ctagcggatt tcggcacgac tgccgtatcc caaaaacgga acatgccgtc tgaagccctt
     3721 cagacggcat cgtcgcaccg tatcaaagcg ttccgtaaga atgcagcccg ctcaaaaaca
     3781 tattcacgcc gataaaagca aatgcggtta cgaacaaacc gataatcgcc caccacgcca
     3841 gcactttgcc gcgccaaccg gcaaccagcc gcaagtgcag ccaaacggcg taattgagcc
     3901 agacgatgaa cgcccacgtc tctttcggat cccaactcca atagcgtccc caagcatctg
     3961 ccgcccacag cgcacccaaa atggtggcaa tggtaaagaa cagaaagccg acggcaatcg
     4021 ccttatacat cacctcgtcg atcaatgccg acggcggcag ccacagtttt ccgccttttc
     4081 cttccgcacg cagggaaacc agttcggcaa taccgagcat cgcggaaatg caaaacgcgc
     4141 cgtaaccgat aaagtttgcc ggaacgtgga ttttcatcca ccaggactgg agcgcgggaa
     4201 tcagcggctg gatggtatgc gcctcgcggg acacgctgta ccacaagaca aatccaacca
     4261 cgaccgccat aaagccgaac acgaagccgc ccaatttctg tatggcgaac ttaccttcat
     4321 aataaagata catcagcgcg gtaatcacca aaaacaggat gaacacttca tacaggttgg
     4381 aaaccggaat atgccccgca tcgggacgga gcagatagct ttcgtgccaa cgtaccagca
     4441 gaccggtaaa gcctgctacg gcagacaccc atgcaaacac ggttcccata cccaacagcg
     4501 tgttggtcgg cacatttttt acgcttgcca aaaccgcgcc cgaaatatag gcgaacaggg
     4561 cgaagaagac aaaggcgcac tgccacatga tcgccgactg gctgctgagg aaataccgca
     4621 acaggaaaat ctctgccgat ttgatgttgc cgccatacaa accgacggcg gcataggcaa
     4681 gcaatacgct taaaggaaca aaccagcgca tcggtttgaa aaaccaaccc aaaaacacgg
     4741 caataccggc acttgcccac aacatgaccg tttcgtaaat gtccatatgc ataccggaac
     4801 gggtctgtac gaaaaccgta gccgcaaaaa ccagcacggc aaatacccaa tcccaaagat
     4861 tcagattgct gatcaaagac ttctgaatca gcagctcgtg ttccggaagg gttttatagt
     4921 gttcagtcat gattcaagtc cttgccgagc cgttgcagac tctcgacgtg ttttggaaat
     4981 tccttctgca aatcccgttc gctgcgggcc gaagacatgg caaaacggat tttgccgtct
     5041 gaaaacaata cccacgcccg tttttcgcgc acataaaaca tcaataccgt acccaatacc
     5101 aacagcaccg agccgagata gaccaaaagc gcacccgggg aacgggtcat ctgcaaaccc
     5161 gacgaacgca cctcggaaaa cccatcaagt tgcagcagca taggcgcggg atattcggtc
     5221 aaacccgtgt acgcatccat actgtgcagc aggaaacgat tccgcgcttc atcctgctgc
     5281 cattcgggca agccgtaccg gcgtatggtt tcatccaaag cagcgttcat cacgccgtaa
     5341 agcatttcgt agaaataacc ctgcatctta tcctgctgct ctttcgggat attggacgta
     5401 ataaattcgt ccaatcccaa atagcctttt tgtgcaaaga tgttcagcgt gttttccgca
     5461 gccagcatga attgttcgcg gatttcggca ggtgcgcctt tggttgcgtc ggcaaccaga
     5521 cgtttgcgcc cttccccatc tttcaaaaac tcacgcaatg ccataaaggt gtccgctttc
     5581 aactgcttgt ccaaggggat acgcagccag cggtattgct gctgcaagcc gctgcgcgtg
     5641 ccggtaatcc aaaaataatc ctgttcctgc aaaaccggca gcatatagtt tttatattcg
     5701 accgcctgcc ctgccgcatc acggatacgg taaacaatgg aagggccgat attggtgtat
     5761 tttttacctt cctgagtaac ggcgcggaca tcgttcagcg tggatttcag gcttttttcc
     5821 cgttccgcgc cctcgctcat gtcctccaca ttcatagaag tgaactgatc gaactcaaga
     5881 cgatatttgt gtttgccaat ttccaacgga aactggtgta tggatgttgc cttcaacacg
     5941 acaggctcgc gcgaagcatc acccaaattc cacgccttga atgtcaaatc cgaaccgccg
     6001 tcggcaaaac tcgcctgata aatcgtgatg ccgtgcaagg tcaaaggatg gttcacgcgg
     6061 atggtgcgct cgagtttctc accggttgcc ttatccgtta cttcaatatc actggcaaaa
     6121 tcgcgcggca tacccgtatt gtaaaaatcg atatggaatt ttttcagttt gacttcaaaa
     6181 ggcaagtcct gaaccaatat cccgttgtcg gcattcagga aaaccacatc cgcactctgc
     6241 ccctcggaaa tattgacgtt gcccctaaat gagagattgg acgcactcaa aatactttcg
     6301 ggcttgaaat ccttggcata aaccgcctga ttgtccggaa caatccgacc ggtcagcata
     6361 cccagtttca acagcaggtt actgtctatc aacccgccca ggcaaatgac aatcaaagca
     6421 acatgggcaa agatatagcc ccatttgttc atcgtgcctt ttttggcggc aatcagaacc
     6481 gacccgccct cacggctgac ggtttttccc tgaaaaccct gcacctccag ataacgtttg
     6541 gcaacctcgg gcgcaatttt tacatccaac agcgaagaat ggcgcatcgc cgccagagat
     6601 ttttctttaa ccttttcccg aaaagacttc atttcgcgcc agaacggcgg cacattgcga
     6661 atcaggcaca aactggtaga aaccaccaaa aacatcatga taacgacaaa ccatgccgaa
     6721 gcatagacgt catacagtcc cagaaaacca aaaatctgcg cccaaaaagg tccgaatttg
     6781 accaaataat ccgtctgcgg ctggttttgc tgcaacaccg taccgataac cgatgcaata
     6841 cccagcagac tgagcaaagc gactgcaaag cgcatggagc tgaaaaaagc gaaccacgga
     6901 cgggaaagaa gtgggggaga tctacgggat ttactcattg tgtgtttatt ccgccatcag
     6961 gaatatggga aagcagaatt gggcaaacag aaaacaacgt cccgattcta ctgtcttgat
     7021 gctttttatt tcaagacaat gaagacagcc tgcatcgatt ccaacggttg cgattgaaaa
     7081 aacttatcgc agaattgcct gaagccgtct gaaaactttt cagacggcct ctaaaacaga
     7141 ctattgcgga attaacgcaa accttggata aagttggcga ccgctttcaa atcttcttca
     7201 gacatacggt ttgcaatatc ttccatgatg gtatttttac gctgaccgga cttgtaggca
     7261 ttcatctgtt caacaatata tgcctgatgc tgaccgccca aacgcggata agcctgaatt
     7321 tcgcttccgc ctcccggcat acccgcaccg ctcggaccgt ggcaggacat acacgccggc
     7381 acttttttat cgctcaaacc gccgcgatag attttcgcac ccaattcggg attttcctta
     7441 ggattggctt caccggattt gggctgctgt ttggcataga atgcggatac gttcaaaata
     7501 tcctgatcgc tcaaattcat taccaccggt ttcatcacag ctgccgaacc gtgggtgcgt
     7561 ttaccgtcgc ggatgccgat agtttgatga tagatgtaag cagtatgctg tgccgccaaa
     7621 cgcggataca tcgcaatgcc gctgttaccg tctgctgcat ggcaagccgc acaaaccgtt
     7681 gcggcaacct gtttgccttt ttccacgtct gctttgggag aggcggaaac cgcaccggca
     7741 gccaaaacaa aggccaataa agtcaatcgt ttcatggagt gctcctgatt acagcattgg
     7801 ataacgcaac aatgctcttt ttatattcaa atacgggatt tttgacccga ttaaaaccga
     7861 tgattctgta aacgtgttat tctatactaa atttacatta aattaccact gtgtttcaca
     7921 taaaaccaac cgcatatttt tgctgtcgga caaacggcgg cggaaaacaa ggatatgccc
     7981 atgaaccttt ttcaaaacgc caaattcttc acgacggtaa accatctcaa agacctgccg
     8041 gacacaccgc tcgaaattgc ctttgtcggc aggagcaatg ccggaaaatc cagtgccatc
     8101 aataccctga ccaaccatgt ccgtcttgcc tacgtttcaa aaacacccgg acggacgcag
     8161 catatcaact tcttcgagct gcagaacggc aattttatgg tcgatttgcc cggctacggt
     8221 tatgcccaag tccccgaagc agtacgcgca cattgggtca atctgctcgg cgactatctg
     8281 caacagcgca aacagcttat cgggctggtt ttgattatgg atgcccgcca tcctttaaaa
     8341 gaactcgaca tccgtatgct ggactttttc cacacgaccg gcagaccggt tcacatcctg
     8401 ctgtcaaaag ccgacaaatt atccaaaaac gaacagataa aaaccctgtc ccaagtcaaa
     8461 aaactgctca aaccttattc cgacaggcaa aacatcagcg tacagctgtt ttccagcctg
     8521 aaaaaacaag gtattgacga ggccaaccga actgtcggaa gctggtttga cgcagcagat
     8581 gccgccgctt cctctccaga ggaaaactga ccccaattat acggaaaccg tatttccccc
     8641 acttgaccga ccgcaaacat ttaaaaaatt gccactgcca aatctaaaat gccgtctgaa
     8701 agacttttca gacggcattt tgcggagtct ttaaaacaga gaatccaact gctgctgttt
     8761 ggaaccagta ttactcggaa gcaccggcgt ttcctgcata tcttggcgga cttcgtcatc
     8821 cgccgcctgc cgtccgcctt ctgccgcgcc cccgtcatct tcttttgccc gtcgggaagg
     8881 ttgcggcgca ataccgctgt tgtccagcgt caagcccgga tcggttacca tacgttcctt
     8941 catatagtat tcgccattgc tgctgaccac accttcaggc attttcatcc ccttgccctg
     9001 ctttcctttc aacgcaaaac gcatatagtc cacccaaacc ggcaccgcaa tcgtaccgcc
     9061 gtagccgaca cgccccatac tcttaggttt gtcgaagccg atatatacgg cagtaaccac
     9121 atcagggtta aaaccgacaa accacgcatc cttattgtca ttggtcgtac ccgttttacc
     9181 ggcaatatcc gttcttccca acgcagctgc cccccttgcc gtaccgacac ggaccacatc
     9241 ctgcataatc ttatacataa tataggcatt gcgcggatcg attgcctgag gcgcattttg
     9301 cccggccacc aaaggttgca tttgggcgcg caacctgccg tctctgtcat aaatcttatc
     9361 gattacgtgc gaagaaaccc tatatccgcc gttcgcaaat acgctatatg cctccgccac
     9421 tttcaacggc gttgtctcgc ccgtacctaa agccatagac aggcttgccg gcagctcgga
     9481 cgacctgaag ccgaaacgcc ggatatactg ttgcgcgtaa ccgacaccga tagacatcaa
     9541 aatacggatg gaaaccatat tcttggaagc cgtcagagcc tgtctcaaag taatgtagcc
     9601 ggaatatctg ccgtctgaat ttttaggtgt ccaaaccgaa ccgttcggcc ctttccccgg
     9661 cagggaaatc ggcgcatcgt taaccactgt ggacgcggtc atccccttag ataatgccgc
     9721 cgaatagaca aacggcttaa aggtcgaacc cggctgccgc attgcctgaa cggcacgatt
     9781 gaatgttttg ctgtgaaaat cataaccgcc gaccagcgcg cgcacagctc cggtttttgc
     9841 atccagcgaa accaaagccc cctgcagcaa cggctcttga accaccgccc aacgcccgcc
     9901 gttgtttttg acacggatga ccgcgcccct gcggatacgg tcctccccca ttttttcatt
     9961 attgaccgcg cgggccgcaa agcccaaggc gcgcctatca agcgtaaccc gcctgccgcc
    10021 gggcagctgt atgacgacat ttttcttttt agtcacatcc aacacaacgg cgggaaccat
    10081 tttatcgacg gtatagagtc ccgacagata ctggctgaca gtctcctcga catcttcact
    10141 cttactcaaa tcgatatagt tttccgcacc gcggtagctg ctgccgcgat cgaaattccg
    10201 tagagccttg cgcaatgcct cggttgccac cttctgatga tcggcgcgga ccgtggtata
    10261 aaccttaaaa ccctgcgtat aggcatcttc accgtatttc tcatacagtt cctgacgcac
    10321 catttccgcc acatataaag cactctgatc gattttccga acaaaccgct cgtaatgcag
    10381 ttcctcattc aacgcctgat cgcgctgttg cacggtaatc atcttctcct cgagcatatt
    10441 gttcaaaata tacttctggc gcaacttggc acgttccgga ttaacaatcg gattataggc
    10501 agacggagcc ttgggcagtc ccgcaagcat ggcggcttcc gccaaagtca aatctcggac
    10561 attcttattg aaatagattt gcgcggcaga tgcaaaacca taggcgcgct gaccgaggta
    10621 aatctgattg aaatacaact cgaggatttt gtctttgctt aaagactgct cgattttata
    10681 ggcaagcaac acctcattga atttgcgtgt gaacgttttt tcactgctca aataaaaatt
    10741 tttcgccacc tgctgcgtaa tcgtactcgc acccgactgc acgctgccgg acacgacatt
    10801 gccgacggca gcgcgggcaa caccccaaac atccaccccc caatgccggt aaaagcgttt
    10861 atcctcggcg gcgataaccg cattccgcaa cacctctggg aaatcgccga tttttgtaaa
    10921 ttcgcgccgc tgctccccat acataccgat gacttcccca tccgccgaat aaatagtcaa
    10981 cggcatttta ggctggtaat gctgcaaaga atccaaagac ggcagtttcg gatacgttac
    11041 caaaatagca atggcaacca aacccactcc aaatacacaa aacccaaaaa ccaaaccaaa
    11101 acaagtcgtt aaaatttttt taatcatagc tgaataataa tttaccatta ttggtattaa
    11161 ataaagtaaa atagcaaccg atttctacaa agcacggttt caatgtgcaa agaacaagga
    11221 atccattacg gataccgaaa cggttactca ctgtacaaat aaagcaggaa ctttcatcat
    11281 gcgcttgttt aaaagcttga aaaaccctaa aaaaacagat gccaagctcc ctaaaaaatc
    11341 ttcgggactc aataaccgcg cggcaatcgg catcgatatc gaccagcatt ccatcaaaat
    11401 ggtccaattg tcaggacgta gtttaaacca aattcaattg gaaaaatacg tcattgccaa
    11461 attaccaaag aatatcattc aaggcaataa agtccaaaat tacgatcaac ttgttacata
    11521 tttgcaacaa gcctatgcca aactgggtac ttcgtgcaaa aacatcatcg cgtccgtccc
    11581 gcaaaatctg gcaaccatcg aacaattgac ctacacagac aaagatgcag aattagacct
    11641 gcaggggttc gtggagtcct ccatctccga agtcagctcg atatcgctcg aagaagccaa
    11701 ttacgactat caggtcttgt cccaatcggc cgccggcgaa gctgtgttgg ccgtcgcatc
    11761 gagaaaggat gaaatcgaac ccctgattga cgcattcaac gccgccggta tgaaattatc
    11821 cgcgcttgat gtggacattt tcggacaata caacgcctac gcgctatgga taaaccattt
    11881 cgcccccgag cttgcagccg aaaaagtcgc cattttcggc gtatatgccg cacagaccta
    11941 cgccttggtc atccaagacg gaaaaatcct atacaaacag gaaacctccg tcagcgaaga
    12001 acagctcaac caactcatcc agcgcaccta tcaggtaaca gaagaaaaag cggaagaaat
    12061 catcaactcc ccgcaaaaac cttccgatta ccaagaaagc gtggcaaact atttcaacca
    12121 gcagattacc caagaaatac aaagggtctt gcagttttat tacaccacgc agaccgcaga
    12181 cgatatgacc gacatcaagc atatcctgct gaccggggaa gcagcgcgcc aggaaggcat
    12241 cgcccaaacc gtcgcctcac aaaccaatgc agatgtacaa tgcgtccatc ccgcgcgtta
    12301 ttttgcggac aacctcaaaa cagacaaaca acaattcgaa cttgatgcgc cgacactgac
    12361 cagggcgttc ggtttggcgg tacggggatt ataattatga acaatttaat caaaatcaac
    12421 ctcctcccct acagggaaga gatgaacaag cgcaaacagc agcagtttaa aacgctgatg
    12481 tacggtgccg tgctgacggg cgttgccgcc gttgcggcaa cctacctgtt tatcgacaat
    12541 atgatcaata accagtcgga aagaaacacg ctgctggaaa cctccatcgc acacttggat
    12601 accgagctgt cggaaataca aaagctcaaa caggaaaaag atgccttcct gattaagaaa
    12661 aacaaaatcg aggagctcca gctcaaacgc ctccaagccg caaaaatcct cgacagcctg
    12721 aatgaggccg tccccggaag cacctacctg acctcgctgg atgccgttac cgccgactct
    12781 tatcggctca gcggcaggac atccagcgac aaccgcgttg ccgccatgat gagggcgatg
    12841 cccaataccg gcatattcaa gcaacccgaa ttgttaagca tcaagaaaaa caattcgcat
    12901 caagaattta cccttcaggc aacattacaa cccatcgtaa aggcggccga atccaaagag
    12961 aatccggctt cgggaaacgc acaggaggca aactgaatgg cttctaaatc atctaaaacc
    13021 aacttggatc tcaacaacct tcacctgctc aaccttcctg ccaggctttt tatcgccctg
    13081 ctggccgttg ccgccgtgct ggggctcggt tatgccggat tgttcaaaag ccagatggaa
    13141 tcccttgagg aatacgaagc aaaagaaacc gaactgaaaa acacctacaa acagaaaagt
    13201 atcgacgcgg ccagcctgaa caacctgagg gacgaacttg cctcaatccg ctctgccttc
    13261 gatatcatgt tgaaacagct gccgacagat gcagaaattc ccaatctggt tcaagagctt
    13321 catcaggcag gttcgagcaa cggtctgcgc ttggacagcg ttatgcccca acctcccgta
    13381 gatgacggcc ccatcaaaag attaccctat tccatttcca ttaccggaaa ttacgaacag
    13441 atcagccaat ttacccgcga tgtcggcagc ctctcccgaa tcattaccct tgagtcgctg
    13501 aaaatcgccc aatctccgga aaacggcggc aatcctgacg gcaagagcag catcctgaac
    13561 ctcaacgcca ttgccaccac ctaccaagca aaatccgtag aagagcttgc cgcagaagcg
    13621 gcacaaaatg ccgagcaaaa ataacttacg ttagggaaac catgaaacac tatgccttac
    13681 tcatcagctt tctggctctc tccgcgtgtt cccaaggttc tgaggaccta aacgaatgga
    13741 tggcacaaac gcgacgcgaa gccaaagcag aaatcatacc tttccaagca cctaccctgc
    13801 cggttgcgcc ggtatacagc ccgccgcagc ttacaggacc gaacgcattc gacttccgcc
    13861 gcatggaaac cgacaaaaaa ggggaaaatg cccccgacac caagcgtatt aaagaaacgc
    13921 tggaaaaatt cagtttggaa aatatgcgtt atgtcggcat tttgaagtcc ggacagaaag
    13981 tctccggctt catcgaggct gaaggttatg tctacactgt cggtgtcggc aactatttgg
    14041 gacaaaacta cggtagaatc gaaagcatta ccgacgacag catcgtcctg aacgagctaa
    14101 tagaagacag cacgggcaac tgggtttccc gtaaagcaga actgctgttg aattcttccg
    14161 acaaaaacac cgaacaagcg gcagcacctg ccgcagaaca aaattaagaa gaggattact
    14221 ccattatgaa taccaaactg acaaaaatca tttctggtct ctttgtcgca accgccgcct
    14281 ttcagacagc atcggcagga aacattacag acatcaaagt ttcctccctg cccaacaaac
    14341 agaaaatcgt caaagtcagc tttgacaaag agattgtcaa cccgaccggc ttcgtaacct
    14401 cctcaccggc ccgcatcgcc ttggactttg aacaaaccgg catttccatg gatcaacagg
    14461 tactcgaata tgccgatcct ctgttgagca aaatcagtgc cgcacaaaac agcagccgtg
    14521 cgcgtctggt tctgaatctg aacaaaccgg gccaatacaa taccgaagta cgcgggaaca
    14581 aagtttggat attcattaac gaatcggacg ataccgtgtc cgcccccgca cgccccgccg
    14641 taaaagccgc gcctgccgca ccggcaaaac aacaggctgc cgcaccgtct accaagtccg
    14701 cagtatccgt atccgaaccc tttaccccgg caaaacaaca ggctgccgca ccgtttaccg
    14761 agtccgtagt atccgtatcc gcaccgttca gcccggcaaa acaacaggcg gcggcatcag
    14821 caaaacaaca gacggcagca ccagcaaaac aacaggcggc agcaccagca aaacaacagg
    14881 cggcagcacc agcaaaacaa caggcggcag caccagcaaa acaacaggcg gcggcaccgg
    14941 caaaacaaac caatatcgat ttccgcaaag acggcaaaaa tgccggcatt atcgaattgg
    15001 cggcattggg ctttgccggg cagcccgaca tcagccaaca gcacgaccac atcatcgtta
    15061 cgctgaaaaa ccataccctg ccgaccacgc tccaacgcag tttggatgtg gcagacttta
    15121 aaacaccggt tcaaaaggtt acgctgaaac gcctcaataa cgacacccag ctgattatca
    15181 caacagccgg caactgggaa ctcgtcaaca aatccgccgc gcccggatac tttaccttcc
    15241 aagtcctgcc gaaaaaacaa aacctcgagt caggcggcgt gaacaatgcg cccaaaactt
    15301 tcacaggccg gaaaatctcc cttgacttcc aagatgtcga aatccgcacc atcctgcaga
    15361 ttttggcaaa agaatccggg atgaacattg ttgccagcga ctccgtcaac ggcaaaatga
    15421 ccctctccct caaagacgta ccttgggatc aggctttgga tttggttatg caggcacgca
    15481 acctcgatat gcgccaacaa gggaacatcg tcaacatcgc gccccgcgac gagctgcttg
    15541 ccaaagacaa agccttctta caggcggaaa aagacattgc cgatctgggc gcgctgtatt
    15601 cacaaaactt ccaattgaaa tacaaaaatg tggaagaatt ccgcagcatc ctgcgtttgg
    15661 acaatgccga cacaaccgga aaccgcaata cgcttgtcag cggcaggggc agcgtgctga
    15721 tcgatcccgc caccaatacc ctgattgtta ccgatacccg cagcgtcatc gaaaaattcc
    15781 gcaaactgat tgacgaattg gacgtacccg cgcaacaagt gatgattgag gcgcgtatcg
    15841 tcgaagcggc agacggcttc tcgcgcgatt tgggcgttaa attcggcgcg acaggcaaga
    15901 aaaagctgaa aaatgataca agcgcattcg gctggggggt aaactccggc ttcggcggcg
    15961 acgataaatg gggggccgaa accaaaatca acctgccgat taccgctgcc gcaaacagca
    16021 tttcgctggt gcgcgcgatt tcctccggtg ccttgaattt ggaattgtcc gcatccgaat
    16081 cgctttcaaa aaccaaaacg cttgccaatc cgcgcgtgct gacccaaaac cgcaaagagg
    16141 ccaaaatcga atccggttac gaaattcctt tcaccgtaac ctcaatcgcg aacggcggca
    16201 gcagcacgaa cacggaactc aaaaaagccg tcttggggct gaccgttacg ccgaacatca
    16261 cgcccgacgg ccaaatcatt atgaccgtca aaatcaacaa ggactcgcct gcgcaatgtg
    16321 cctccggtaa tcagacgatc ctgtgtattt cgaccaaaaa cctgaatacg caggctatgg
    16381 ttgaaaacgg cggcacattg attgtcggcg gtatttatga agaagacaac ggcaatacgc
    16441 tgaccaaagt ccccctgttg ggcgacatcc ccgttatcgg caacctcttt aaaacacgcg
    16501 ggaaaaaaac cgaccgccgc gaactgctga ttttcattac cccgaggatt atgggtacgg
    16561 ccggcaacag cctgcgctat tgatgcgtca aaataagggc atatgtttta cggcatatgc
    16621 cctttcttta tgctttttgc cgcgaccgaa atgccgtcat tcccgcgcag gcgggaatcc
    16681 agtccgttca gtttcggtca gtttcggtca tttccgataa attcctgttg cttttcattt
    16741 ctggattccc acttttgtgg gaatgacggc ggaaggggta aatcctcaca acccaaagcc
    16801 tcgtcatttc cacaaaaaac agcaacccga aacagcaact taaaaccccg tcattcccgc
    16861 gcaggcggga atctaggtct gtcggttcag gaacttatcg gataaaacgg tttctccaac
    16921 cctgcgttct agattcccac tttcgtggga atgacgggat atgggtttcc gtgcggacgt
    16981 gttcggattt ccgcctgcgc gggaatgacg gcgacagatg ccc
//
LOCUS       DAXHRP010000022        16888 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.022, whole genome shotgun sequence.
ACCESSION   DAXHRP010000022 DAXHRP010000000
VERSION     DAXHRP010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.022"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(52..717)
                     /locus_tag="ACFM72_000584"
     CDS             complement(52..717)
                     /locus_tag="ACFM72_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC6257196.1"
                     /translation="MAVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(917..1690)
                     /gene="folE2"
                     /locus_tag="ACFM72_000585"
     CDS             complement(917..1690)
                     /gene="folE2"
                     /locus_tag="ACFM72_000585"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HFC6257197.1"
                     /translation="MNTIADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTIAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHAEALDFAQLRKLTTEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVCLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTADAEVGIEEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            1882..3039
                     /locus_tag="ACFM72_000586"
     CDS             1882..3039
                     /locus_tag="ACFM72_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HFC6257198.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKVLAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPLDCWLVLRGIKTLALRMNAHCQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHDVKMEMGIRVGLLRFSVGIEDVDDIWNDISAALDTTV"
     gene            complement(3103..4104)
                     /gene="hemB"
                     /locus_tag="ACFM72_000587"
     CDS             complement(3103..4104)
                     /gene="hemB"
                     /locus_tag="ACFM72_000587"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HFC6257199.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAEEAYNPE
                     GLVPAAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(4287..4571)
                     /gene="yhbY"
                     /locus_tag="ACFM72_000588"
     CDS             complement(4287..4571)
                     /gene="yhbY"
                     /locus_tag="ACFM72_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HFC6257200.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            4681..5301
                     /locus_tag="ACFM72_000589"
     CDS             4681..5301
                     /locus_tag="ACFM72_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HFC6257201.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            5365..7332
                     /gene="ftsH"
                     /locus_tag="ACFM72_000590"
     CDS             5365..7332
                     /gene="ftsH"
                     /locus_tag="ACFM72_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HFC6257202.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDKSVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            7554..7985
                     /locus_tag="ACFM72_000591"
     CDS             7554..7985
                     /locus_tag="ACFM72_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HFC6257203.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPNFLPWYSKTEVIGRNG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            7978..8256
                     /locus_tag="ACFM72_000592"
     CDS             7978..8256
                     /locus_tag="ACFM72_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HFC6257204.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            8309..8887
                     /gene="pth"
                     /locus_tag="ACFM72_000593"
     CDS             8309..8887
                     /gene="pth"
                     /locus_tag="ACFM72_000593"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HFC6257205.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARATLPDGDVWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQARLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSAEHR
                     QQIDDAIAKSLQAIPDIISGKWEEATRFLHSK"
     gene            8948..9154
                     /locus_tag="ACFM72_000594"
     CDS             8948..9154
                     /locus_tag="ACFM72_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HFC6257206.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSVEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            9151..9513
                     /locus_tag="ACFM72_000595"
     CDS             9151..9513
                     /locus_tag="ACFM72_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HFC6257207.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            9744..11159
                     /locus_tag="ACFM72_000596"
     CDS             9744..11159
                     /locus_tag="ACFM72_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HFC6257208.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            11278..11787
                     /locus_tag="ACFM72_000597"
     CDS             11278..11787
                     /locus_tag="ACFM72_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC6257209.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSAPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            11950..13332
                     /locus_tag="ACFM72_000598"
     CDS             11950..13332
                     /locus_tag="ACFM72_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HFC6257210.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMKIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGTFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSSMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(13352..14107)
                     /locus_tag="ACFM72_000599"
     CDS             complement(13352..14107)
                     /locus_tag="ACFM72_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC6257211.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(14117..14833)
                     /locus_tag="ACFM72_000600"
     CDS             complement(14117..14833)
                     /locus_tag="ACFM72_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC6257212.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(14823..15650)
                     /locus_tag="ACFM72_000601"
     CDS             complement(14823..15650)
                     /locus_tag="ACFM72_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6257213.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            15935..16843
                     /locus_tag="ACFM72_000602"
     CDS             15935..16843
                     /locus_tag="ACFM72_000602"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HFC6257214.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT         4170 a         4866 c         4158 g         3694 t
ORIGIN      
        1 agcattaaaa aatgccgtct gaaaatcctt gcgttttcag acggcattgc cttatgccca
       61 aataacggtt tcttccaagg gcctgcgcgc cttcgtggcg atttcctgaa cgcggtaacc
      121 gaatgtcgcg gcgacggaca cgccccattc tgccgcatcg aacaaaccga actgcccgga
      181 caatacgcgt tccatatcgg catagttgaa accttccacc gggcaggaat cgatacctgc
      241 catcgccgca cccgtcatca tgttgcccaa cgcgatatag gtctggcggc aacaccagtc
      301 aaacaaggcg cgcgaatcgt ccaaaatctt gatgtcgtcg gcttgaaacg cctgatacct
      361 cgccaaagat tttgccatgg catccggttc ggtaacgccg cgccgtttga ggctttccaa
      421 cataaacggg ctgtcgaagc gggcattttt ctttgccaaa aacaccacca aatgactggc
      481 ggtatccaaa gcatccgcca taccccaaga aaacggcttg attgcctgtc ggatttcggg
      541 gttttgaacc acaacaaact gccaaggctc cgaaccgacc gaactgggcg acaaacgccc
      601 gagttctaaa ataaactgaa aatcctcggc actgatttta cgtgccgcat cgtaatgccg
      661 gcatgatttg cggtttttaa atgcggatag aacctgctct ttgcttaata ctgccatcgc
      721 acatcctttc attacttgta ttgcaaattg atttcaaacc gatacggcac tgccgcacca
      781 tacaatccgt cctcgccatc aagcttcatc cggactttac ccatctctct acggctggga
      841 aaacaaagcg gcggcagact cgggaataac gccccaatgc ctttcagacg gcatttgggc
      901 atcattgcaa acgcgcctac gggtaggcga tataggcata agccgaatgg ttgtggatag
      961 actcgaaatt ctcgctctcg acaacgaaac tcttgatgcg tttgtcggcg atcagcgaag
     1021 tagcgacatc acgcaccata tcttccacga atttcgggtt ttcgtaggct ttttcggtaa
     1081 cgtatttttc atcggggcgt ttgagcaaac cgtagagttg gcagcttgcc tgcgcctcca
     1141 cataatcaat gacttcctcg ataccgactt ctgcatcggc agtcaggctg acggtaacat
     1201 gcgaacgctg gttgtgcgcg ccgtattggg aaatttcttt ggaacacggg caaagcgagg
     1261 ttacgggaat catgaccttc atactgtggc cgtatgcccc gtctttgatt tcgcccgtga
     1321 gacagacatc ataatccagt aaggaccgaa taccggaaac cggcgcggtt ttcttgcgga
     1381 aaaacggaaa agaaacgctg attttgccgg cgcgggaatc taaaagcgcg accatttcgg
     1441 tagtcagctt gcgcaattgt gcaaaatcca aggcttcggc atgttgctcc atcaatgcga
     1501 caaaacgcga catatgcgtc cccttctgct cagcaggcag gtaaaccgtc atggtcagac
     1561 gggcaatggt ggactggatg ccttctgcag tttgcagggt aatcggaaag cgcaggtctt
     1621 tgataccgac ctgattgatc ggcagattgc gcaaatctcg gctggattgc acgtctgcaa
     1681 tagtgttcat gagttgtttt tccttaatat tcatgtaatt gttgagatgt gtgcatggta
     1741 tggcgtttcc gccggggaat ataccgtcaa tctgcaaatg cgagattata tcactcgctt
     1801 ttagcagctg cattgattgt ttctattttt cagatagtga taaaatcttc gattattcac
     1861 atctacatag gcagagacca aatgaaattc gccacgaaag ccattcattc cagctacgat
     1921 tgcgacgaac acaaccgcgc gctgatgccg ccgatttatc aaaacagtat gtttgcgttg
     1981 cacgagattg gcgaaaatgt gccttaccgt tattcgcgcc tgagcaaccc gacccgtcag
     2041 attttagaag acaccgttgc cgatttggaa cacggtgcgg caggttttgc gttttccagc
     2101 ggtatggcgg gaattgatgc cgtatggcgc actttcctgc gcccgggcga taccattgtc
     2161 gccgtcgccg atatttacgg cggcgcttat gatttattgg tcgatgttta tcaaaaatgg
     2221 ggggtgaacg ttgtttttgc cgatttaggc aatccggata atttggacga actgcttaaa
     2281 gcgcacaagg tcaaactggt ttggctggaa acgccgtcca atccactttt acgcttggta
     2341 gacatcaaag tccttgccgc aaaagccaaa gcagccggtg cgctggtcgg tatcgacaac
     2401 acttttgcca cgccgtatct gcaacagccg ttggatatgg gttgcgattt tgtattccat
     2461 tccgctacca aatatttgtg cggccattcc gacgtgttga tgggcatcgt cgttgccaaa
     2521 accaaagaac tggcgcagcc tttgcacgat atgatggtgc ataccggcgc ggttgccggc
     2581 ccgctggact gctggctggt gttgcgcggc atcaaaacac tggctctgcg catgaacgcc
     2641 cattgccaaa acgcactcga aatcgcgcgc cgtttggaag cccatcctgc cattgaaaaa
     2701 gtgttccatc ccggcctgcc gtctcacgaa cattacgaac tggcgaaaac acaaatgccc
     2761 aaaggcatcg gcggcgtggt tacggtttat ctcaaaaacg acacgcgtga agcggcaaac
     2821 agcgtgatta aaaacatgaa actggtcaaa atggcttcca gcctcggcgg cgtggaaagc
     2881 ttggtcaacc attgctattc ccagtcccac agcggcgtgc cgcatgatgt gaaaatggaa
     2941 atgggcatca gggttggcct gctgcgtttc tctgtcggta tcgaagatgt agatgatatt
     3001 tggaatgata tttccgccgc actggatacg actgtataat ccacgcaaaa tgccgtctga
     3061 aaccatggtt tcagacggca tttcaatatt gcgaatcaaa tatcaacgct tcagcatctt
     3121 ggccgcctca atggcataat aggtcaaaat cccatccgcg cccgcacgtt tgaatgccag
     3181 caggctttcc aaaaccactt tatcgccatc cagccatccg ttggcaaccg ccgcctgcaa
     3241 catcgcatat tcgcccgaaa cctgataggc ataagtcggc acaccgaact cgtccttcac
     3301 gcggcggaca acgtccaaat acggcaaacc gggcttgacc attaccatat ccgcaccttc
     3361 ctgaatgtcc aacgccactt cgtgcaacgc ctcatcggta tttgccggat ccatctggta
     3421 ggttttcttg tccgccttgc ccaaattgcc cgaactgccc accgcatcgc ggaacggtcc
     3481 gtaaaacgcc gaagcatatt tggcggaata cgccataatc cgcgtgtgga tatgcccggc
     3541 atcctccaac gcctcgcgaa tcgcaccgat acgcccgtcc atcatatcgg aaggggcaac
     3601 cacctgcgcg cccgcttcag cgtggcacaa agcctgcttg accaaaacct ctacggtttc
     3661 atcgttcatc acataaccgt tttcgtccgt cagcccgtcc tgaccgtgaa ccgtataagg
     3721 atcgagcgcg acatccgtca taatgcccag ttcgggaaac ctctcgcgca gggcgcggac
     3781 ggctgccggc acgagtcctt cgggattgta cgcttcctct gcacgctcgg ttttgtttgc
     3841 cgtaaccacg ggaaagagtg ccaacatcgg aataccgagc tttaccgcct cttccgccgt
     3901 aaacagcagc ctgtccaaac tttgacgctt cacacccggc atagaaggca catcctcctc
     3961 gcgcgccgac ccctccaata cgaacaccgg ataaatcaaa tcatcggcgg tcagcgtgtg
     4021 ttcgcgcatc aggcggcgtg aaaaatcgtc cctgcgcata cggcgcatac gcgaagccgg
     4081 aacattgcgg taaggaaact gcataagccc tccaatcatc ctgtcaacaa ttcaaaccat
     4141 acggaagccg ccgcaacttg cagacagcat cgggcggcaa tcaaaatccg ttttcaccgg
     4201 aaagggtttc ggcccgccga aatgccgcgc cgaaggacgg cgtcccgccc attaaagaac
     4261 aatagcaaaa caacagcttc aggctgtcag ccttcgatat tcttacgcca caataccaaa
     4321 agtttcccga tatgctgaac aggttgcgcg tcaaccgcct cacataaggc agtgcagatt
     4381 tcgatacgtt cggcacggtc gtcgccgaat acgcgcactt taatcagctc atgcgccgtc
     4441 aatgccgcat cggtttcctt gatgaccgcg tccgtcagac cctgctgacc gaccatcaca
     4501 acaggatgga gatggtgcgc gcgcgctttc agttccaaaa tttctttggt gttcaatttg
     4561 gtatccgtca ttttcctact gcttgaataa aaagaataat gcggcattgt acgcgatttg
     4621 gcacgacatc ggcaaaatta acgtacaata cgcggtttcc attccgaccc gcgaaccact
     4681 atggctgtac gttccaaatc ctcaaaagcg tggctgcacg aacacgtcaa cgaccactac
     4741 gtccatatgg cgcaaaaaga cggctaccgc gcccgtgccg catacaaact tttggaaatc
     4801 aacgaaaaag acaaattaat caaacccggc acggtacttg ccgacttggg cagcgcaccg
     4861 ggaagctggt cgcaggttgc cgccaagctg acgggtactt ccggcgcggt attcgccttg
     4921 gacatcctgc ctatggaagc catagggggc gtctccttca ttcagggcga cttccgcgag
     4981 aacgacgtac tggcacaatt cgaaaccttg ttggacaacc gcccgctcga ccttgtaatt
     5041 tgcgatatgg cgcccaatat gtcgggaaac gccgtaagcg atcaggcacg cagcttttat
     5101 ctgtgcgaac tggctttaga cttcgcctcg caacacctga aaaccggcgg cagctttttg
     5161 gtcaaagtct ttcagggtgc aggctatcag gaatacatgg cagccatgcg cgaaattttc
     5221 ggcacggtgc agacgcgcaa acccgaagcc tcgcgcaatc gctccagtga gatttattta
     5281 ttgggcaaaa ataaacgctg acaatacaga cggcgtgctt tacaatcatt tccgttttac
     5341 acctcaatta tggagccttg ctaagtgggg aacaccttta aatcaatcct tgtctgggtc
     5401 gccttgggta tcggcctgat ggctgcgttc aacgctttag acggtaaaaa agaagacaac
     5461 gggcaaatcg aatattctca gttcatccaa caggtcaaca acggcgaagt atccggcgtc
     5521 aacatcgaag gatccgtcgt cagcggctac ctgattaagg gcgagcgcac cgacaaaagc
     5581 accttcttca ccaacgcgcc tttggacgac aacctgatta aaacactgct cgacaaaaac
     5641 gtccgtgtaa aagtaacgcc ggaagaaaaa ccgagcgcgc tggctgccct gttttacagc
     5701 ctgctgcccg tcctgctgct gattggcgcg tggttctact ttatgcgtat gcagacgggc
     5761 ggcggcggaa aaggcggcgc attctcattc ggcaaaagcc gcgcccgcct actggacaaa
     5821 gatgccaaca aagttacctt tgccgatgtc gccggctgcg acgaagccaa agaagaagtg
     5881 caggaaatcg tcgattacct caaagcgccg aaccgctatc aaagcctggg cgggcgcgtg
     5941 ccgcgcggca tcctgctggc gggcagcccg ggtacgggta agacgctttt ggcgaaagcg
     6001 attgcaggcg aagccggcgt gccgttcttc agcatttcag gttccgactt tgtcgaaatg
     6061 ttcgtcggtg tcggtgcaag ccgcgtccgc gatatgttcg agcaggcgaa gaaaaacgcc
     6121 ccctgcatca tctttatcga cgagattgac gcagtcggcc gccaacgcgg cgcaggtttg
     6181 ggcggcggca atgatgagcg cgagcaaaca ttaaaccaat tgttggttga aatggacggt
     6241 tttgagagca atcagactgt aattgtgatt gcggcaacca accgccccga cgtactcgat
     6301 cctgcgctgc aacgccccgg ccgtttcgac cgccaagtgg ttgtccccct gccggacatc
     6361 cgggggcgcg aacagatttt gaacgtccac tctaaaaaag tgcctttgga caaatctgtg
     6421 gatttattgt ccctcgcgcg cggcacgccg ggtttttccg gcgcggattt ggcgaacttg
     6481 gtcaacgaag ccgccctgtt tgccggccgc cgcaataaag tcaaagtcga tcagagcgat
     6541 tttgaagacg ccaaagacaa aatctatatg ggtccggaac gccgcagtat ggtgatgcac
     6601 gaagacgaaa aacgtgcgac ggcgtatcac gaatccggac acgcgattgt tgccgaaagc
     6661 ctgcccttta ccgaccccgt ccacaaagta accattatgc cgcgcggacg tgcgctgggt
     6721 ctgacttggc agcttccgga gcgcgaccgc atcagtatgt ataaagatca gatgttgagc
     6781 cagctctcca tcctgttcgg cggacggatt gccgaagaca tcttcgtcgg acgcatctcc
     6841 accggcgcat caaacgactt tgaacgcgca acccaaatgg cgcgcgaaat ggtaacgcgc
     6901 tacggcatga gcgacaaaat gggcgtgatg gtttatgcgg aaaacgaagg cgaagtcttc
     6961 ttgggacgca gcgtaacccg ttcgcaaaac atttccgaga aaacccagca ggacatcgat
     7021 gcggaaatcc gccggatttt ggacgagcag tatcaggttg cctacaaaat cctcgatgaa
     7081 aaccgcgaca agatggaaac gatgtgcaaa gccctgatgg aatgggaaac catcgaccgc
     7141 gatcaggtac tggaaatcat ggcgggcaaa caacccagcc cgcccaaaga ttacagccac
     7201 aacctgcgcg agaatgcgga cgcggcggaa gataacgcgc cgcacgctcc gactcgggaa
     7261 gaaaccgaag cacctgcccc ggcagacacc gcttcgacag agtccgagca gcagcctgaa
     7321 aacaaggctt aacttcccga acaaacggca gcccgcaagc tgccgttttc ccatcctgtt
     7381 ttcagacggc attttccgct caatgccgtc tgaaacgcca aagccgtatc ggtttttgcg
     7441 aatctgcgat atggcggttt aaattgaaat cagaacgggg caaggctgta ccggtttaaa
     7501 attaaaccgc tataataccg cccttcgaat acacgcccgc attggtgatg cccgtgaaaa
     7561 aagttgaaaa aaacatcttg gtgctgcacg gcgcggacaa aatgttcgag ctggtcgata
     7621 aggttgagga ttacccgaac tttctgccgt ggtacagcaa aaccgaggtc atcggacgca
     7681 acggcaacga actgaaggcg cggctgttta tggactatat gcacgttcgc caatcattcg
     7741 ccacgcacaa ccgcaacatt ccgggcaggg aaatccgtat ggaactgctc gaaggtccgt
     7801 tcaaaacctt acgtggaacg tggaaattta tcgatttggg cgacgatatg tgcaaaatcg
     7861 aattcaattt ggaatacgat ttttccaatg ccgttttgtc cgccttaatt tcccccgtct
     7921 tcaaccacct ttccgccacg ctggtcgaag cgttcgtcaa agaggcagac cgccgttatg
     7981 cttgaaattg agattgtgta cgggctgccc gaccgacagg ttttgaaaac catgcagctt
     8041 gccgagggaa caaccgtccg cgccgccgca ctgcaaagcg gtttggacgg catatttgaa
     8101 gatttaaacc tgcattccgc gcctttgggc attttcggca aagccgtcaa agacgacacg
     8161 ccgctgcgcg acggcgaccg catcgaagtg taccgcccgc tgttgatcga ccccaaagaa
     8221 gcgcgccgca aacgcgttca aaatcaagaa gaataaccat gccgtctgaa gccttcagac
     8281 ggcattcggc agaaacacgg aaaatatcat gtcaaacaca atcaaaatgg ttgtcggctt
     8341 gggcaacccg ggcaaagaat acgaacagac ccgccataat gcaggctttt ggttcctcga
     8401 cgaactggct tggaagtgga aggcttcgtt taaagaagaa aaaaaattct tcggcgaagt
     8461 cgcccgtgct accctgcccg acggcgatgt ctggctgctc aagccgacca cgttcatgaa
     8521 ccgttccgga caggcagttg ccgcccttgc gcagttttat aaaatcaaac ccgaagaaat
     8581 cctcgtcgtc cacgacgaac tcgacattcc ctgcggacgg atcaaattca aactcggcgg
     8641 cggcaacggt ggacacaacg gcttgaaaga cattcaggca cggctcggca cggccgacta
     8701 ttaccgcctg cgcctcggta tcgaccaccc gggcgaccgc aacctcgtcg tcggctatgt
     8761 cctgaacaaa cccagtgcgg aacaccgcca acagattgat gatgccatcg ccaaatccct
     8821 gcaggccata cccgacatca tttccggcaa atgggaagaa gcaacacgtt tcctgcacag
     8881 caaatgaccc aatgccgtct gaagcccttt cagacggcat gttcccgatt tccatatccg
     8941 aacagtcatg accgaactca agcagcttat ccaaaccgaa tccatccccg tcatcgaaga
     9001 aaccctcgat ttcctgctgt acgaatgcag catcgacgac gcaccgtccg tcgaagaagt
     9061 ggcacaatgg cgcgacatac ttgccgcacg cggcggcaaa ttcctgcgcc tgtccaaaat
     9121 ctgccaaacg tggctggacg aggaggcggc atgaagctgc cgcgcaaccg cttcagcctg
     9181 ctttccgcat tgtggtttgc cggcggcatc tattcgctgc tcttcaaagc tgccgacacc
     9241 gcgccgccgc cgtttccgca tttcgacaaa gcagcacacc ttgccctgtt tttcgcacaa
     9301 atctggcttt tgaccaaagc attcaaaacc ggaaaacttc ccatccccta ccgcagcctg
     9361 atggtctttg ccctctgttt cgccctcttc agcgaatgcg cgcaggcatg gtttaccgca
     9421 acgagaaccg gcagtttggg cgatgttctt gccgatatgg caggtacggt tctcgcactc
     9481 tttgccgccc gcgccgccga ccgcccggac tgaatcggtt tatttccccc aaacaggatg
     9541 cacctcttcc cgatacatcc tatttttccc cttacatatc aatcccatct cataaacaaa
     9601 accgacaaat cgtttacaat atatttacac tacatcagat tacaaatata ctcgaaccag
     9661 ttgcagaatc ggcggttcca caaaccgttt cggattgcac gacacaaaag aaaaaccgat
     9721 tttattgcct taaaggagta ttcatgaacc tgcatgcaaa ggacaaaacc cagcatcccg
     9781 aaaacgtcga gctgctcagt gcgcagaagc cgattaccga ctttaagggc ctgctgacca
     9841 ccattatttc cgccgtcgtc tgtttcggca tttaccacat cctgccttac agccccgatg
     9901 ccaataaagg tatcgcgctg ctgattttcg ttgccgcact ttggtttacc gaagccgtcc
     9961 acattaccgt aaccgcactg atggtgccga ttctcgccgt cgtactcggt ttccccgaca
    10021 tggacatcaa aaaggcgatg gctgattttt ccaacccgat tatctacatt tttttcggag
    10081 gcttcgcgct tgccaccgcc ctgcatatgc agcggctgga ccgtaaaatc gccgtcagcc
    10141 tgttgcgcct gtcgcgcggc aatatgaaag tggcggtttt gatgttgttc ctcgttaccg
    10201 cctttctgtc catgtggatc agcaacaccg ccaccgccgc gatgatgctg cctctagcaa
    10261 tgggtatgct gagccacctc gaccaggaaa aagaacacaa aacctacgtc ttcctcctgc
    10321 tcggcatcgc ctattgcgcc agcatcggcg gcttgggcac gctcgtcggc tcgccgccca
    10381 acctgattgc cgccaaagcc ctaaatctgg acttcgtcgg ctggatgaag ctcggcctgc
    10441 cgatgatgct gttgattctg cccttgatgc tgctctccct gtacgtcatc ctcaaaccta
    10501 atttgaacga acgcgtggaa atcaaagccg aatccatccc ttggacgctg caccgcgtga
    10561 tcgcgctgtt gattttcctt gccacagccg ccgcgtggat attcagctcc aaaatcaaaa
    10621 ccgccttcgg catttccaat cccgacaccg ttatcgccct gagtgccgcc gtcgccgtcg
    10681 tcgtcttcgg cgtggcgcaa tggaaggaag tcgcccgcaa taccgactgg ggcgtgttga
    10741 tgctcttcgg cggcggcatc agcctgagca cgctgttgaa aacatccggc gcgtccgaag
    10801 ccttgggaca gcaggttgcc gccacctttt ccggcgcgcc cgcatttttg gtgatactca
    10861 tcgtcgccgc cttcattatt tttctgaccg agttcaccag caacaccgcc tccgccgccc
    10921 tgcttgtacc gattttctcc ggcatcgcta tgcagatggg gctgcccgaa caagtcttgg
    10981 tattcgtcat cggcatcggc gcatcttgtg ccttcatgct gccggttgcc acaccgccta
    11041 acgcgattgt gttcggcacg ggcttaatca agcaacgcga aatgatgaat gtcggcatac
    11101 tgctgaacat cctctgcgta gtattggttg ctctgtgggc ttatgctgta ctgatgtaaa
    11161 ccatcgacct aaacaacaag accgtctgaa agaatatttt tcagacgacc ttgaagtttg
    11221 tcgttcagac acaatttgtc gaatcattca aaaccggatt ctaacgaaag gaaacccatg
    11281 attatcctgc acaccaacaa aggcgacatc aaaatcgaac tcgatttcga caaagccccc
    11341 gttaccgcca aaaacttcga gcaatacgtc aaagacggct tctacgacgg cgtaatcttc
    11401 caccgcgtca tcaaaggctt catgattcaa ggcggcggca tggatgaaaa catgaacgaa
    11461 aaagaaaccc gagatccgat tcaaaacgaa gcgtccaacg gcctgcccaa cgataaatac
    11521 accatcgcca tggcacgcac ttccgccccc cattccgcca gcgcgcaatt cttcatcaac
    11581 actgccgaca acgctttcct gaacttccgt tctaaagagc tgtacggcaa aaccgtcgtc
    11641 caagactggg gctatgcagt attcggtaaa gtcgttgacg gttttgacgt tgtcgatgcc
    11701 atcgaaggcg tatccaccaa acgccacggc taccatgacg acgtaccgag cgaacctgtc
    11761 gtcatcatta aagccgaagc ggtataaacc ggcaatccga aagcagcctg cacaaaggct
    11821 gctttttttg tttcaggcgg cataaaatcc aagcacatat gccgtctgaa cacctcccgc
    11881 aagccttcgg acaatgttgc aacgtgttaa aatagcctcc tttcctgaaa ccacaacaag
    11941 gaaaccatca tggcaaatat tgcccgcgac atcttcaaag cctacgacat ccgaggcatt
    12001 gtcggcaaaa ccctgactga cgatgccgcc tatctcatcg gcagggccat cgccgccaaa
    12061 gccgccgaaa aaggcatgac ccgcatcgcg ctcggacgcg acggacgctt gagcggtccc
    12121 gaactgatgg agcacatcca acgcggcttt accgacagcg gcatcgacgt cctcaacgtc
    12181 ggtatggtcg ccacgcccat gctctatttt gccgctatca acgaatgcgg cggcagcggc
    12241 gtgatgatta ccggcagcca caatccgccc gattacaatg gtttcaaaat gatgctcggc
    12301 ggcgacacgc tcgcaggcga agccattcaa gaacttttag ccattattga aaaagacggt
    12361 tttgttgccg ccgacaaaca aggcaacgta accgaaaaag acatctccgg cgaataccac
    12421 aaccacatcg tcggccacat caaactcaaa cgccccatga aaatcgccat cgacgcaggc
    12481 aacggcgtag gcggcgcatt cgcaggcaaa ctctacaaag gcttgggcaa tgaagttacc
    12541 gaacttttct gcgacgtgga cggcactttc cccaaccacc atcccgaccc atccaaaccg
    12601 aaaaacctgc aagatttgat tgccgcgctg aaaaacggcg atgccgaaat cggcttggcg
    12661 tttgacggcg atgccgaccg cttgggcgta gttaccaaag acggcaacat catctatcca
    12721 gaccgccaac tgatgctttt cgcgcaagac gtgttgagcc gcaatcctaa agccaaagta
    12781 attttcgacg tcaaatccac ccgtctgctt gcgccttgga ttaaagaaca cggcggcgaa
    12841 cctgtgatgg aaaaaaccgg ccacagcttt atcaaatcct ccatgaaaaa aaccggcgcg
    12901 ccggttgccg gcgaaatgag cggacacatc ttcttcaaag aacgctggtt cggcttcgac
    12961 gacggtctgt acgccggcgc acgcctcttg gaaatcctgt ctgcctccga taatccgtcc
    13021 gaagtgttaa acaacctgcc gcaaagcatt tccacgcccg aactcaacat cgccctgccc
    13081 gaaggcagca acggccatca ggttatcgac gaactcgccg ccaaagccga atttgaaggc
    13141 gcaaccgaaa tcatcaccat cgacggtctg cgcgttgaat ttcccgacgg cttcggtctg
    13201 atgcgtgctt ccaataccac gccgattctg gtgttgcgtt ttgaggcgga tacgcaagaa
    13261 gccatcgagc ggattcaaaa ccaattcaaa gccgtcatcg aaagcaatcc gaatctaatc
    13321 tggcctctgt aaacacagga aaaatgctta atcaaatctt ggtagattgg atttggctta
    13381 aaaatctccg cgtccgttcg tgtttggggt ggtcgaacaa ctctttcggg ctgccctgct
    13441 ctacgataac gccgccgtcc atcacgacaa cggtcgtggc aacttccagc gcgaacttga
    13501 tttcgtgggt aacgacgacc atcgtccaac cttcccgcgc caattccttc atggcgttca
    13561 acacgtcttg caccaattca gggtcgagtg cggaagtggg ttcgtcaaac aacatcagct
    13621 cgggctgaat cgccaatgcg cgggcaatgc cgacgcgctg ctgctgaccg ccggaaagct
    13681 ggtagggata caaatccact ttgtcgccca agccgacttt ttccagcagt ttcagagcct
    13741 cttcgcgcgc ttgggcggca ggcttgccct gtacggcaac cggtccttcc attacgtttt
    13801 ccaaggcggt tttgtgcgga aagaggttgt attgttgaaa caccatgcct gatttgcggc
    13861 gcagtgccaa aatatcgtgt ttgcttggtt ttttagaaaa atcgattttc agcggtcgct
    13921 cgttgtcgaa ctcgatttgt ccgtcttcgg gcatttccaa cgcgtttagg catcgcagaa
    13981 acgtcgtttt gcctgagccg gaaggcccga ggataacgac cacctgccct ttgcccacat
    14041 ccaaatcgat gccgcgcaaa atagtgtttt cgccgaaggt cttatggata ttgcggattt
    14101 taatcataac aactccttat ttggcgacat aacggtcgaa acgtttttcc aaacgtgcct
    14161 gaatcaggaa cagaaccttg cagaaacacc agtaaaccaa tgcggcttcg atatagacgg
    14221 gcaaaaagtc gtaagtgcgg tttgccgttt cctgcgcgac gcggaacaat tcagttaccg
    14281 ttaccaccgc tgcgagcgag gtgtttttga acaagccgat aaactcgttg ctcaaaggcg
    14341 gcacggcaac gcggaatgcc tgcggcgcga cgatgcggcg gaacgtctgc atataggtca
    14401 taccgatgga gaaacctgct tcccattggc ctttcggtac ggacaaaatt gccgcgcgta
    14461 tggtttcgga agcgtatgca ccgacattga gcgagaagcc gataatggcg gcgggaatcg
    14521 gatcgatata gataccgacg gacggcagcc cgtaaaacac aatcacaagc tgcaccaaca
    14581 gcggcgtacc gcgaatgacg gaaatataaa attccaccaa tttcagcagg attttccgca
    14641 cgatgccgcc ggcgggcata atccgcacca aagccacggc taccgcaatc atcataccga
    14701 taacgaaaga agctgccgcc aaaggcagag agaccgcgaa gccggctttg accataggca
    14761 aaaacgcgct gacaatcata tcggcgcgtg tttccgtcat aaacggcagc gaagcaagga
    14821 aattattgaa cactgatgtc ttttccgaag aattgttcgc ccagtttttt cagcgtaccg
    14881 tcggctttca gctcgttgat tgccgtactg aatttcgcca cggcttcgtc attgcccttg
    14941 ttgacaatca ggccggaacc gactttttca tcggcaggtg cggaccaaac gattttcacg
    15001 cccgcattcg ggtttttctt cagatagtcc aaaaccgcca attcgtcgtt cagggttgca
    15061 tcggcacgtt tttgttcaat cagggtcagc gattgcgcca aaccgtcaac agccaccaaa
    15121 tctgcgcctg cagctttggc tttttcgccg tagttgctgg tcagggattg tgcggttttc
    15181 acgcctttga tgtcgtcgat agatttgatg ttgctgtcgt tacgggcaac caatacggca
    15241 ccgctccagc tgtaaggatc ggatttgtcg aatgtcgctt ggcgttcggg gctggtcaga
    15301 ccgacttggt ttgccaccac gtcgaaacgc cccgccttca aacccgccat catcgaatcc
    15361 cattgcgttt ctttaaactc gactttcacg cccagttttt ccgccacggc gcgggttact
    15421 tccacatcgt aaccggtcag tttgccgtcc ttgtcgtggt aggtaaacgg tgcgtaagta
    15481 ccttccgtgc cgacggtaac cgtgccttta ttgttgatgc gctcgattaa agaaccggaa
    15541 actgccgatt gtgcaggcgc ggaagatgct ccgctgccgc cttccgaacc gccgcaggcc
    15601 gccaaaacca atgcggcaat gccgccgagt acgaattttt tcaacatcat cctctcctgt
    15661 aaaaaatgtg caagtgcggc attctaagtg aaattgcggc aaacacaaag aatccttttt
    15721 ttatatggtt attccaaatc ggaatggaaa agatatgccg aagccgccgg aagcggaaat
    15781 aaagggggcg ggaaaggcgg cgggcggcac gaaaccgaaa agcggcatca ggtatgcaaa
    15841 cggcggattc acgcacgccg ttccggcaaa aatccgcctg ccgattcggt gctataatcc
    15901 atccgaaaca gatgacacca aaaaggaaca tctcatgaac acgccccaat ccgccatcat
    15961 tcccgaccac gcccaagccg gcatctttat cgaagccgac ttcgccgcca accgcctcaa
    16021 cgatattaaa gccgcctgcc gcgcttcgct cgacgcgtta actgccttga aagcccgctt
    16081 tccggacgat attttgggtc tgaccatcgc cttcggcagc aaagcctggg caacattcgg
    16141 acatacggac gaaggcagtg aaatcaaacc cttctccgaa atgggcaacg ggcttgcgcc
    16201 gtccacgcag cacgatatgt ccatccacat ccaatccttc cgccaaaacg ccgcctacgc
    16261 gcttgcccaa tccgttttgg gcgcgttcgg cgacagcata tgcgtcgcgt ccgaagaaca
    16321 cggtttgcgc ctgtatcagg atcgcggact ggacggtttc gtcgacggca cggaaaaccc
    16381 gcagggcgat gaaaatgtcc gcgaagtcgc catcatcccc gaaggaaaac ccgatgcggg
    16441 cggcagctat gtcctgctgc aaaaatacct gcacgatttg aaaaaatggg atgccgtccc
    16501 cgtcgccgaa caggaggcct cggtcggacg cggcaaggaa accgacgacg aattcggccg
    16561 cgatgtccgc ctgcccgatt cgcacctcgg ccgcgtcaac ctgaaagaaa acggagtcgg
    16621 cctgaaaatc gtccgccgca gcctgccctt cggcaaaatc agcggcgaac acggtttgat
    16681 gtttaccgca tactgccgca cgctgcacaa tatcgaagcg caattattga gtatgttcgg
    16741 cgatacggac ggcaaaaccg acctgctgct ccgacatctc tccgccgccg tttcgggcgg
    16801 atactactac gcgccgtctg tcgaacgcct gcaaaacctc taagccggac gatgccgtct
    16861 gaaaccattt ttcagacggc attttccc
//
LOCUS       DAXHRP010000023        16881 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.023, whole genome shotgun sequence.
ACCESSION   DAXHRP010000023 DAXHRP010000000
VERSION     DAXHRP010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.023"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="ACFM72_000603"
     CDS             complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="ACFM72_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HFC6257215.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAVVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMRNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1912..2046
                     /gene="rpmH"
                     /locus_tag="ACFM72_000604"
     CDS             1912..2046
                     /gene="rpmH"
                     /locus_tag="ACFM72_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HFC6257216.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2049..2414
                     /gene="rnpA"
                     /locus_tag="ACFM72_000605"
     CDS             2049..2414
                     /gene="rnpA"
                     /locus_tag="ACFM72_000605"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HFC6257217.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2479..2700
                     /gene="yidD"
                     /locus_tag="ACFM72_000606"
     CDS             2479..2700
                     /gene="yidD"
                     /locus_tag="ACFM72_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HFC6257218.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2872..4509
                     /gene="yidC"
                     /locus_tag="ACFM72_000607"
     CDS             2872..4509
                     /gene="yidC"
                     /locus_tag="ACFM72_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HFC6257219.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4590..5315)
                     /locus_tag="ACFM72_000608"
     CDS             complement(4590..5315)
                     /locus_tag="ACFM72_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC6257220.1"
                     /translation="MSEGMVSPVLYLIPTPLGTPDTPCLLPHDQRAVVGLTDFVVEAE
                     KTARAHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVA
                     DPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLK
                     ALEQRSRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVA
                     DWRRMKEMPNLKKRPTIFVMYAG"
     gene            complement(5362..5952)
                     /locus_tag="ACFM72_000609"
     CDS             complement(5362..5952)
                     /locus_tag="ACFM72_000609"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HFC6257221.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPEALIVGADQVAWCDGRQWGKPMNLANAHKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEGL
                     GALLIERIESSDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            6100..6603
                     /locus_tag="ACFM72_000610"
     CDS             6100..6603
                     /locus_tag="ACFM72_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HFC6257222.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSS"
     gene            6637..6816
                     /gene="rpmF"
                     /locus_tag="ACFM72_000611"
     CDS             6637..6816
                     /gene="rpmF"
                     /locus_tag="ACFM72_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HFC6257223.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6991..7518
                     /locus_tag="ACFM72_000612"
     CDS             6991..7518
                     /locus_tag="ACFM72_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HFC6257224.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7606..8661
                     /gene="plsX"
                     /locus_tag="ACFM72_000613"
     CDS             7606..8661
                     /gene="plsX"
                     /locus_tag="ACFM72_000613"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HFC6257225.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8797..9048
                     /locus_tag="ACFM72_000614"
     CDS             8797..9048
                     /locus_tag="ACFM72_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC6257226.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            9075..9283
                     /locus_tag="ACFM72_000615"
                     /pseudo
     CDS             9075..9283
                     /locus_tag="ACFM72_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218360.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9414..9617
                     /locus_tag="ACFM72_000616"
     CDS             9414..9617
                     /locus_tag="ACFM72_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257227.1"
                     /translation="MPSEAAWAFRRHFLRLKQHIGNPAPPVHGNLHLKTICMPNHTPI
                     PISVICTLPVLGNHRFFAYNSRI"
     gene            9644..10606
                     /locus_tag="ACFM72_000617"
     CDS             9644..10606
                     /locus_tag="ACFM72_000617"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HFC6257228.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10653..11024
                     /locus_tag="ACFM72_000618"
     CDS             10653..11024
                     /locus_tag="ACFM72_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HFC6257229.1"
                     /translation="MKRQAFFKLMACAAFLSAISLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            11050..11976
                     /gene="fabD"
                     /locus_tag="ACFM72_000619"
     CDS             11050..11976
                     /gene="fabD"
                     /locus_tag="ACFM72_000619"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HFC6257230.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILDQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFANAVKLVRLRAELMQSAVPQGVGAMAAILGLEDGQVKAICAESAQGEVVEAVNFN
                     SPGQVVIAGNAAAVGRAMTAAKEAGAKRALPLPVSVPSHCSLMKPTADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            12114..13979
                     /gene="msbA"
                     /locus_tag="ACFM72_000620"
     CDS             12114..13979
                     /gene="msbA"
                     /locus_tag="ACFM72_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HFC6257231.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIIAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            14079..15644
                     /gene="guaA"
                     /locus_tag="ACFM72_000621"
     CDS             14079..15644
                     /gene="guaA"
                     /locus_tag="ACFM72_000621"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HFC6257232.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDGEPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNESKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVIALRAVITSDFMTAHWAELPYSLLGKVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            15706..16452
                     /gene="fabG"
                     /locus_tag="ACFM72_000622"
     CDS             15706..16452
                     /gene="fabG"
                     /locus_tag="ACFM72_000622"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFC6257233.1"
                     /translation="MSTQDLNGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGSEGRVLNSAEPETIESLIADIEKAFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
     gene            complement(16724..>16881)
                     /locus_tag="ACFM72_000623"
     CDS             complement(16724..>16881)
                     /locus_tag="ACFM72_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6257234.1"
                     /translation="VEQSFGTLHHKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANR
                     LSAPAAA"
BASE COUNT         4249 a         5173 c         3986 g         3473 t
ORIGIN      
        1 ttaatccgct atatctttac ccttcggacg gcatgggcaa tatcatgtcg tctgaaaacg
       61 ttttccatca gttttgaatc agaatcagca gcttttcata atcctgagcc aattccggat
      121 cttcttcgcg cagtttcgcc actgccctga tgccgtgcat aacggtcgta tggtcgcgcc
      181 caccaaacga atcgccgata gacggcaggc tcaaagtggt cagttctttg gtcaggctca
      241 tcgccacctg gcgcggacgg gcaatgtttc gtgtccgttt cttaccgagc acatcgctga
      301 ttttgatgcg gtaatatttc gcaacggcat caataataat atcggcggtg atgactttgt
      361 gcttctcggc aataatgtcc tgcaaagcgg tacgcgccaa atcgatgtcg atgacgggac
      421 ggttcataaa gcggctgctc gctccgacgc ggttgaacgc gccttcaagc tcacgcacgt
      481 tggaacggat cagattggca atgaacagcg cggcttcgtc ttcaatactg atgcccgccg
      541 cttccgcctt tttctgcaaa atggcgatac gcatttccaa ttcgggcggc tcgagttcca
      601 aagtcagtcc ccatgaaaaa cgggatttga ggcggtcgtc cataccttcg attttggcgg
      661 gtaaaacatc gcaagtgagg atgagctgtt ttttctcgtt atggaaatga ttgtacagat
      721 agaagaattc ctccatcgta cggtctttgc ctttgatgaa ctggatgtcg tcgataatca
      781 gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta ggtattgttg cgaaccgcct
      841 tcataaagct gcggatatag tcgtccgaat gcatatagcg cactttggca tcgggacggt
      901 ttttcaacag ttcgttgccg accgcctgca caaggtgggt tttacccaaa cccgtactgc
      961 catagaggaa aaacgggttg tagctctgcc ccgggctttc cgcaatcgcc tgcgcggcag
     1021 ccgccgcaag gcggttgccc ttgccttcga ccaatgtatc gaacgtataa tccggcgaca
     1081 gattggtctg ctcgtaacgc gcctcttccg catcgcgctg cgcatccgtc cgcgctttcg
     1141 caagcacctc cgattccgga cgggaagcag gttcggcagt atggcgcggc tcgtgcggca
     1201 ggtttctcat acgttccgcc aaaatatccg ccgccgtttt cgacgcagcg ggtttgacag
     1261 gctcttcaga cggcagctca tccaacagaa cctcctgcac aggcatctcc tccgaccccg
     1321 cgtgcaagga cggctcggca ggttcgacag caccttcaac caccgccatc tcataacgca
     1381 cgccttctcc cggtttgaat acgaaggcgg aacggccggc agccaactct tccctcaccg
     1441 cttctatttt tccggcaaac tggctcttga gcatattgca ggcaaactgg ttcttgccgt
     1501 acaccaccca tacgccaccc tcctcaccga cggtaagggg cgcaatccat tgcgcaaact
     1561 gcccttgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac tctgctagtg
     1621 tcatagataa gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata taatattttc
     1681 aaaaagaaaa caaatctgtt gaacgcacat cggttcaaaa cgcgactgcc cgattatacc
     1741 gactcacgaa tattttatcc acaacccgtg caaaaattta tccacagaaa ggcggcagaa
     1801 atccgcaggc aatcgggcaa tcctcctgca aagtttctat attgattgac aaaagcggca
     1861 aattggagtg taattcacgg tttatctatc taccgatttt taggaaacat catgaaacgc
     1921 acttatcaac cttccgttac caaacgcaaa cgcacccacg gcttcctcgt gcgctccaaa
     1981 acacgcggcg gccgcgcagt attggcggcg cggcgcgcca aaggccgcaa acgcctggcg
     2041 gtataatttt ggactaccgc ttcggaaggc agtaccgctt gttaaaaacg gatgattttt
     2101 catccgtttt tgcattcaga aaccgccgca gccgcgacct gctgcaagtt tcgcgctcaa
     2161 acggcaacgg gctgggccat ccccgcatcg gtctggtggt cggcaaaaaa accgccaaac
     2221 gcgccaacga acgaaattat atgaagcgcg ttatccgcga ctggtttaga ttgaacaaaa
     2281 accggctgcc gccgcaggat ttcgtcgtgc gcgtccaccg taaattcgac agggctaccg
     2341 caaaacaggc aagggcggaa ctggcacaac tcatgttcgg caaccccgca accggatgca
     2401 ggaaacaggc atgatcagaa cggtactctg caggcaaggt tcagacggca acgggtttcc
     2461 catacaagga acatcccgat gaacttccta ttgtccaaac tcctgctggg actgatacgg
     2521 ttctaccaat attgcatcag cccgctgatt ccgccgcgct gccgttatac gccgacctgt
     2581 tcgcaatacg cggtcgaagc ggtcaaaaaa tacggcgcat tcaaaggcgg ccggctcgcc
     2641 atcaagcgca ttgcacgctg ccaccctttc ggcggacacg gacacgaccc cgttccctga
     2701 cccgacgcaa tattcaaatt gcacgctttc cttttatttc ccatcggttt ctatataatg
     2761 ccgtctgaag cttcgggcag gcggcacgac cgccgggtat gaagcccgcc cttattcccc
     2821 gtctatcgga acacgcaacc tgcggcattt ccgaccattc aggaaactct tatggatttt
     2881 aaaagactca cggcgttttt cgccatcgcg ctggtgatta tgatcggctg ggaaaagatg
     2941 ttccccactc cgaagcccgt ccccgcgccc caacaggcag cacaacaaca ggccgtaacc
     3001 gcttccgccg aagccgcgct cgcgcccgca acgccgatta ccgtaacgac cgacacggtt
     3061 caagccgtca ttgatgaaaa aagcggcgac ctgcgccggc tgaccctgct caaatacaaa
     3121 gcaaccggcg acgaaaataa accgttcatc ctgtttggcg acggcaaaga atacacctac
     3181 gtcgcccaat ccgaactttt ggacgcgcag ggcaacaaca ttctaaaagg catcggcttt
     3241 agcgcaccga aaaaacagta cagcttggaa ggcgacaaag ttgaagtccg cctgagcgcg
     3301 cctgaaacac gcggtctgaa aatcgacaaa gtttatactt tcaccaaagg cagctatctg
     3361 gtcaacgtcc gcttcgacat cgccaacggc agcggtcaaa ccgccaacct gagcgcggac
     3421 taccgcatcg tccgcgacca cagcgaaccc gagggtcaag gttactttac ccactcttac
     3481 gtcggccctg ttgtttatac ccctgaaggc aacttccaaa aagtcagctt ttccgacttg
     3541 gacgacgatg ccaaatccgg caaatccgag gccgaataca tccgcaaaac cccgaccggc
     3601 tggctcggca tgattgaaca ccacttcatg tccacctgga ttctccaacc taaaggcaga
     3661 caaagcgttt gcgccgcagg cgagtgcaac atcgacatca aacgccgcaa cgacaagctg
     3721 tacagcacca gcgtcagcgt gcctttagcc gccatccaaa acggcgcgaa agccgaagcc
     3781 tccatcaacc tctacgccgg cccgcagacc acatccgtca tcgcaaacat cgccgacaac
     3841 ctgcaactgg ccaaagacta cggcaaagta cactggttcg cctccccgct cttctggctc
     3901 ctgaaccaac tgcacaacat catcggcaac tggggctggg cgattatcgt tttaaccatc
     3961 atcgtcaaag ccgtactgta tccattgacc aacgcctctt accgctctat ggcgaaaatg
     4021 cgtgccgccg cacccaaact gcaagccatc aaagagaaat acggcgacga ccgtatggcg
     4081 caacaacagg cgatgatgca gctttacaca gacgagaaaa tcaacccgct gggcggctgc
     4141 ctgcctatgc tgttgcaaat ccccgtcttc atcggattgt attgggcatt gttcgcctcc
     4201 gtagaattgc gccaggcacc ttggctgggt tggattaccg acctcagccg cgccgacccc
     4261 tactacatcc tgcccatcat tatggcggca acgatgttcg cccaaaccta tctgaacccg
     4321 ccgccgaccg acccgatgca ggcgaaaatg atgaaaatca tgccgttggt tttctccgtc
     4381 atgttcttct tcttccctgc cggtctagta ttgtactggg tagtcaacaa cctcctgacc
     4441 atcgcccagc aatggcacat caaccgcagc atcgaaaaac aacgcgccca aggcgaagtc
     4501 gtttcctaaa tgccgcagca tgaaaaatgc cgtctgaaac ctgttcagac ggcattttta
     4561 ttgctcaccc cctatcgggg cggaaatctt caacctgcat acatcacaaa aatcgtcggg
     4621 cgttttttca gattgggcat ttccttcatc ctgcgccaat ccgcaaccgt tttactgacc
     4681 accgactgag tcggcaacgt caaatccgta gccgtgcaca agcgcgtttc aggatgcagg
     4741 ttttccaccg catccgccaa caacacatcg ttgcgatacg gcgtttcgat aaacagctgc
     4801 gtttcattct gctggcgcga acgttgttcc aaagccttca aactctgaat ccgctcattt
     4861 ttttcagacg gcaaataacc cttaaacgca aagttctgcc cattcgcacc cgaagccatc
     4921 agcgccagca acaagctgga cggaccgacc aaaggccgta cttcaaaacc gtgtttatgc
     4981 gccaatgcca ccaaattcgc acccggatca gccacagccg ggcaacccgc ctcgctgaca
     5041 atgcccatac tgcgcccttc ttgcaaaggt tttagcaatt ccggcaaagt cttcaaatcc
     5101 gtgtgttcgt tcagcgtttg caaattcagt tcgcggatag gcattgtcac gcccaaatgt
     5161 ttcaaatgcg cgcgcgccgt tttttccgct tccacgacaa aatccgtcag cccgacaacc
     5221 gcccgttgat catgcggcaa caggcacggc gtatcgggcg tacccaaagg cgtaggaatc
     5281 aaatacaaaa caggagacac cattccctca ctcatcagtt aaaaatgccg tctgagcctt
     5341 tcagacggca taaacgggca gttacagaac ctccacgccc tcatttttca agaaatcgac
     5401 cagacggaaa accggcaaac cgattaaagc attcggatcg ctgctttcaa tccgttcgat
     5461 cagcagcgcg cccaagccct cgctcttcaa cgcacacgag caataaaccg catcaggctc
     5521 gcgctccaaa tagcggagga tgtgcagctc gtccaacttc ctcatcacga ccaccgtctt
     5581 atcgatatgc cgctgcatcc tgcccgtaac cgtatttagc agaacgaccg cgctgtaaaa
     5641 ctcaatctcc ctgccgctca aatgcatcaa catcttgtgc gcattagcaa ggttcatcgg
     5701 cttgccccac tgcctgccgt cgcaccacgc cacctggtcc gcaccgacaa tcaacgcctc
     5761 tgggaaacgc ccggccaacg accgcgcctt accctcggca aggcgcaatg ccgtctgagg
     5821 ggcagactcc cccaacatcg gcgtttcgtc aaaatcgggg gacgccgcct gaaaggcaat
     5881 gccgagcctt tccatctgtt cgcggcggaa aaccgaactc gtacccaaaa tcaaaggcag
     5941 ttccaaaccc atcccatcct ccttaccgtt gaaaacacgc ccgaaggggc ggtaaaatcc
     6001 agccatgcgc cgaaacacgg atacccgcct tcggcgtacc gcaacatttt tcttaaaaat
     6061 attgacgtta gaacatctaa attatatcat atctcgttta tgtcagaccc taatttgatt
     6121 gacccggaaa ttttcgccgc cgaagggcag aatctgcaag gcagttttct gctggaagaa
     6181 ttggatgaac gcgtcagttc gcacgattat cccgccgaca ggcagaccaa aatatcgttt
     6241 acactgaccg gcggtcgcga tcggctgcaa cgcctgttcc tcgacctgaa cgtcaaagcc
     6301 gatatgcccc tgatttgcca gagatgtatc aaacccatgc cgttcatgct tgatgaaagc
     6361 agccgtatcg tcctgttttc caacgaagag tccttggacg aatccatgct tgccgacgaa
     6421 gaactcgaag gcatactgat tgaaaaagaa ctcgacgtgc gcacattggt agaagaccaa
     6481 atcctgatgt ccctgccctt ttcgccgcga cacgaagact gcggcgacaa tgggacactg
     6541 gaagaagtca atcgggacaa acccaacccc tttgctgttt tggcaggttt gaaaagcagt
     6601 taattaggac acagtttatt tatctaggag cttgaaatgg ccgttcaaca aaacaaaaaa
     6661 tccccttcca aacgcggtat gcaccgttcg cacgacgcgc tgaccgcgcc tgcactgtct
     6721 gtcgacagca caaccggcga agtacaccgc ccgcaccaca tctcccccaa cggtatgtac
     6781 cgcggccgca aagtggtcaa agccaaaggc gaataatccc tattcgactg actgaaaaag
     6841 ccagaacatt gccatgcaat tactggcttt ttttgcattg gacgcaccat ccgtccaaac
     6901 tttcgccata cgtcaacaca caggggcaaa gcgttccgta taataccccg tgaaaatatt
     6961 ccaaaagccc caaccaccaa ggaaattccg atgaaacaga aaatctggta cacctacgat
     7021 gacatccacc gcgtcatcaa agcattggca gaaaaaatcc ggaacgccga catcaaatac
     7081 gatgccatga ttgccatcgg cggcggcggc tttattccgg cacgtatgct gcgctgtttt
     7141 ctggaaattc cgatttatgc cgtaaccacc gcctattacg acagcgacaa cgaaggacag
     7201 gttaccgaag aagtcaaaaa agtccaatgg ctagaccccg ttccagaagc cctgcggggc
     7261 aaaaacgtac tcgtcgtcga tgaagtggac gacagccgcg taaccatgga attttgcctg
     7321 acagagctgc tcaaagaaga cttcggtacg atcggcgtcg ccgtactgca cgaaaaaatc
     7381 aaagccaaag caggcaaaat ccccgaaggc attccctatt tcagcggcat caccgtagaa
     7441 gactggtgga tcaactatcc gtgggacgca ctcgacatcg acgaacacaa ccgccttgcc
     7501 gaggccggcc gaggctgacc ctttcagacg gcatattttc cgaaccgatg ccgtctgaag
     7561 cccgcacgac ccctgccgca gaccgaaaac ctaccggaga accctatgat tacacttgcc
     7621 gtagatgcca tgggcggcga ccaaggactt gccgttaccg tacccggcgc aaccgcattc
     7681 ctccaagcac accccgatgt ccgcctgatt atgaccggcg acgaaacgca actgcgccaa
     7741 gccctgaccg cggcaggcgc accgatggaa cgcatcgaca tctgccatac cacccaagtt
     7801 gtcggcatgg atgaatcccc tcagtccgcc ctaaagaaca aaaaagactc ctccatgcgc
     7861 gtcgccatca accaagttaa agaaggcaaa gcccaagccg ccgtatccgc aggcaacacg
     7921 ggtgcgctca tggcaaccgc acgtttcgtc ctcaaaacca ttcccggcat cgaacgcccc
     7981 gccatcgcca aattccttcc ttccgacacc gaccacgtta cccttgcact cgaccttggc
     8041 gcgaacgtcg actgcacgcc cgaacagctc gcccaatttg ccgttatcgg cagcgaactc
     8101 gtccacgcac tccatcctca aaaaggacag ccgcgcgtcg ggctggtcaa cgtcggcacg
     8161 gaagacatca aaggtacgga caccgtcaaa caaacctaca aactgctgca aaacagcaaa
     8221 ctcaacttta tcggcaacat cgaaagcaac ggcatcctct acggcgaagc agatgtcgtc
     8281 gtcgccgacg gctttgtcgg caacgtcatg ctcaaaacca tcgaaggcgc ggtcaaattc
     8341 atgagcggag ccatccgccg cgaattccaa agcaacctgt tcaacaaact tgccgccgtt
     8401 gccgccctac ccgccctcaa agggctgaaa aacaaactcg atccgcgcaa attcaacggg
     8461 gccatcctgc tcgggctgcg cggcatcgtg attaaaagcc acggcggcac agacgaaacc
     8521 ggtttccgct acgcactcga agaagcctac cacgaagcca agtccgccgg cctttccaaa
     8581 atcgaacagg gcgtagccga acaactcgcc gcactcgaaa ctgccaaagc cgtccaaaac
     8641 gaaaatgtcg gcggtctgta acacgcgcga tgccgtccga acgcccccgc ccctttcaga
     8701 cggcatccgc ccgccccgaa cctgcgggcg cggacggcga tgcacctgtc cggcacttcc
     8761 caaatacttc cctgtaaaat aaggaatatt tgaaaaatga agacattaga aaaacggatg
     8821 aaagctctag acaaacggat gatgaagttc ggaaaatccc ttgaaggcag gcttgatgcc
     8881 cgtctgattg aatccgcatt ggattatatt cattattcgg aacgtttttt ggcttttgaa
     8941 atcctgtgta cttatatcga agatttcgat gtccggctga cggaacaaga atcccgggaa
     9001 atttctttta tcaacaagga atttgagata gaaagcacgt ccgattaacc aataaagcca
     9061 atgggttgat aaacatgaaa acatcgacgg tcgtttttgg cggatttttt atggcagaca
     9121 acggagagcg aatccaaatc cccgttttgg aaaatcctga cattagggaa atcaatcact
     9181 tttttccgta tcaaattttg agaaaaaagc cggcgtcctt gttttcagaa tcatccccga
     9241 gccggaattt ggcgataccg aattaactgt ctattttgaa aaggatatta tagtggatta
     9301 acaaaaacca gtacggcgtt gcctcgcctt gccgtactgg tttttgttaa tccactatat
     9361 cagacgaaaa caaacacccg cgccaatagc ctgacggcaa cccggcaatc aaaatgccgt
     9421 ctgaagcagc ttgggctttc agacggcatt tcctccgctt aaaacagcat atcggcaacc
     9481 ccgccccgcc cgtccacggc aatctgcatc tgaaaaccat ctgtatgcca aaccacaccc
     9541 ccatcccgat ttccgtcatt tgcaccctgc ctgtattggg caatcatcgg tttttcgctt
     9601 acaatagccg aatctgaacc aactatccaa aaaggccgtt cccatgcagt atgccaaaat
     9661 ttccggcacg ggcagctatc ttcctgccaa ccgcgtcagc aatgacgacc ttgcccaaaa
     9721 agtggatacc tcggacgagt ggattaccgc gcgcacgggc atcaaattcc gccatattgc
     9781 agccgaaaac gaaaaaacca gcgaccttgc cgccgaagcg gcgcggcgcg ctttggcaga
     9841 tgccaaatta aatataaacg acattgattt gattatcgtg gcgacggcaa cgccggatat
     9901 gcagtttcct tctaccgcca ccatcgtgca gcaaaaattg ggcatcacca acggctgtcc
     9961 cgcgtttgac gtacaggcag tgtgcgcagg ctttatgtac gcgctgacca cggcaaacgc
    10021 ctacattaaa agcggtatgg cgaaaaacgc gctggtcatc ggcgcggaaa ccttcagccg
    10081 catcgtcgat tggaacgacc gcacaacctg cgtattgttc ggcgacggcg cgggcgcggt
    10141 ggttttgagc gcggcggaca aaccgggcat catccacagc aaactcaaag ccgacggcaa
    10201 ttatctgaaa ctcttaaacg tccccgggca aatcgcctgc ggcaaagttt ccggttcgcc
    10261 gtacatttcg atggacggtc ccggcgtgtt caagtttgcc gtcaaaatgc tgtccaaaat
    10321 cgccgatgac gttatcgaag aagccggtta taccgccgct caaatcgact ggatcgtgcc
    10381 gcatcaggca aaccgccgca ttatcgaatc gaccgcgaaa catttaggtt tgagtatgga
    10441 caaagtcgtc ctgaccgtcc aagaccacgg caacacatcc gccgcatcga ttccgctggc
    10501 tttggatacg ggcatccgca gcggacaaat caaacgcggt caaaacctgc tgctcgaagg
    10561 catcggcggc ggtttcgcgt ggggcgcggt gctgttgcaa tattgaaccc gatgccgtct
    10621 gaaacaggct ttcagacggc atttcccata tcatgaagcg gcaggctttc ttcaaactga
    10681 tggcgtgtgc ggcatttctg tctgccattt cgctgcgcct ccccgtattg ggcgcgtgtt
    10741 acgcaatatt gtccctctat gcgtttgcac tttacggcat cgacaaacgg cgtgccgtgc
    10801 ggggaaaacg ccgcattccc gaacaccgcc tgctgctgcc tgccttgttc ggcggttggg
    10861 cgggcgcata cttgggcagc aggatattca ggcataaaac ggcgaaaaag cgttttgttg
    10921 tgctgttccg tctgactgtt tcgggcaatg tcctggcgac ctgcatcctg attgattatt
    10981 tcgttccgcc cgaacttttt gtcaaactcg ggcaacatct ctgacaatcc aaccaaacaa
    11041 aggaatacca tgtcttttgc attcttcttt cccggacaag gttctcaaag cctcggcatg
    11101 atgaacggct ttacagggca ggccgtcgtc aaaaacacat ttgacgaagc atccgccata
    11161 ttggatcaag acttgtgggc gatgattaac ggtagcgatg ccgaaatcat cggtcaaacc
    11221 gtcaataccc aacccatcat gctcgccgcc ggcgttgccg tttaccgcgc ctatttggaa
    11281 gcgggtggca aaacgcctgc cgccgttgcc ggacacagcc tcggcgaata taccgcgctt
    11341 gtcgccgccg gcgcattgga ttttgccaac gcggtcaaac tcgtgcgcct acgcgcagaa
    11401 ctgatgcagt ccgccgtacc gcaaggcgta ggcgcaatgg cggcgattct cggcttggaa
    11461 gatgggcagg ttaaagccat ttgtgccgaa tccgcacagg gcgaagtggt cgaagccgtc
    11521 aacttcaact cgcccggaca agtcgtaatt gcaggcaatg ccgccgccgt cggacgcgcc
    11581 atgaccgccg ccaaagaagc cggtgccaaa cgcgccctgc cgctgcccgt gtccgtacct
    11641 tcccattgca gcctcatgaa acccaccgcc gacaaactcg ccgaagccct gaaaaccgtt
    11701 gaaatcaagc agccgcaaat ccgcgtcatc cacaacgccg acgttgccgc ctacgatgat
    11761 gccgacaaaa tcaaagacgc gctcgtccgc cagctttaca gccccgtacg ctggacagaa
    11821 accgtcaacg cccttgtttc agacggcatt gccgaatccg ccgaatgcgg cccgggcaaa
    11881 gtgttggcag gtctggcaaa acgcatcaac aaggccgccg cgtgcagcgc gctgaccgat
    11941 gccggacagg ttgccgcctt tatcgaagca cactgacttc gttccgcaaa aagcagcctg
    12001 ccctcttcag gctgcttttc acgtccgaac ggcggcagcc ccatatttac gctataatcc
    12061 atcccgacca aaccaccgac agcggctgcc gttgcagttc ccgccctacc gatatgatag
    12121 aaaaactgac tttcggactg tttaaaaaag aagacgcgcg cagctttatg cgcctgatgg
    12181 catacgtccg cccctacaaa atccgcatca ttgccgccct gattgccatt ttcggcgttg
    12241 ccgccaccga aagctacctt gccgccttca tcgcccccct gattaaccac ggcttttccg
    12301 cacccgccgc gccgcccgag ctgtctgccg ccgccggcat catttccacc ctgcaaaact
    12361 ggcgcgaaca gtttacctat atggtttggg ggacggaaaa caaaatctgg accgtccccc
    12421 tcttcctcat catcctcgtc gtcatccgtg gcatctgccg ctttaccagc acctatctga
    12481 tgacttgggt ctccgtgatg accatcagca aaatccgcaa agatatgttt gccaaaatgc
    12541 tgaccctttc ctcccgctac catcaggaaa cgccgtccgg caccgtactg atgaatatgc
    12601 tcaacctgac cgaacagtcg gtcagtaacg ccagcgacat cttcaccgtc ctcacgcgcg
    12661 acacgatgat cgttaccggc ctgaccatcg tcctgcttta cctcaactgg cagctcagcc
    12721 tcatcgttgt cctgatgttc cccctgctct ccctgctctc gcgctactac cgcgaccgtc
    12781 tgaagcacgt catttccgac tcgcaaaaaa gcataggcac gatgaacaac gtgattgccg
    12841 aaacccatca gggacaccgc gtcgtcaagc tgttcaacgg gcaggcgcag gcggcaaacc
    12901 ggtttgacgc ggtcaaccgc accatcgtcc gcctcagcaa aaaaatcacg caggcaacgg
    12961 cggcacattc cccgttcagc gaactaatcg cctcgatcgc cctcgccgtc gtcatcttca
    13021 tcgccctgtg gcaaagccaa aacggctaca ccaccatcgg cgaatttatg gcattcatcg
    13081 tcgcgatgct gcaaatgtac gcccccatca aaagccttgc caacattagc atccctatgc
    13141 agacgatgtt cctcgccgcc gacggcgtat gtgcatttct cgacaccccg cccgaacagg
    13201 acaaaggcac gctcgcaccg cagcgtgtcg aagggcgcat cagcttccgc aacgtcgatg
    13261 tcgaataccg ttcggacggc atcaaagccc tcgacggctt caacctcgac atcagacaag
    13321 gcgaacgcgt cgccctggtc ggacgttccg gcagcggcaa atccaccgtc gtcaacctgc
    13381 tgccccgctt tgtcgaaccg tctgccggca acatctgcat agacggtatc gacatcgccg
    13441 acatcaaact cgactgcctg cgcgcccaat ttgccctcgt ctcccaagac gtattcctgt
    13501 ttgacgacac cctgtttgaa aacgtccgat atagccgtcc cgacgcgggc gaagccgaag
    13561 tcctatccgc cctccaagcc gctaacctgc aaagcctgat cgacgcatca ccgctcggac
    13621 tgcaccagcc catcggatcg aacggcagca acttatccgg cggacagcgg caacgcgtcg
    13681 ccattgcccg cgccattttg aaagacgcgc cgatattatt attggacgaa gccaccagcg
    13741 cattagacaa cgaatccgaa cgcctcgtcc aacaagcgct cgaacgcctg atggaaaacc
    13801 gcaccggcat catcgtcgcc caccgcctga ccaccatcga aggggccgac cgcatcatcg
    13861 tgatggacga cggcaaaatc atcgaacaag gcacacacga acaactgatg tcccaaaacg
    13921 gctactacac aatgttacgc aatatctcaa acaaagatgc cgccgtccgg acggcataaa
    13981 caaaatgccg tccgaaatgg tacaatcgcc ccgacccttt cagacggcat catatccgcc
    14041 gacccatccg attatcttca atcactgtaa aacccattat gacccaagac aaaatcctca
    14101 tccttgactt cggttcgcaa gttacccagc tcatcgcccg ccgcgtgcgc gaagcccacg
    14161 tttactgcga gctgcattct ttcgatatgc ctttggacga aatcaaagcc ttcaacccca
    14221 aaggcatcat cctctccggc ggccccaatt ccgtttacga atccgactat caagccgata
    14281 ccggtatttt tgatttgggc attccggttt tgggcatctg ttacggcatg cagtttatgg
    14341 cgcaccactt gggcggcgaa gtgcagcccg gcaaccagcg cgaattcggt tatgcgcaag
    14401 ttaaaaccat agacagcgag ctgacacgcg gcattcaaga tggtgagcca aacacactcg
    14461 acgtatggat gagccacggc gacaaagtgt ccaaactgcc cgacggtttc gccgtcatcg
    14521 gcaacacccc gtcctgcccg attgccatga tggaaaacgc cgaaaaacaa ttctacggca
    14581 tccagttcca ccccgaagtt acccacacca aacaaggccg cgccctgttg aaccgctttg
    14641 tcttggatat ttgcggcgca caaccgggct ggacgatgcc gaactacatc gaagaagccg
    14701 ttgccaaaat ccgcgaacag gtcggcagcg acgaagtgat tttaggtctg tccggcggcg
    14761 tggactcttc cgtagccgcc gcgctgattc accgcgccat cggcgaccaa ctgacctgcg
    14821 tgttcgtcga tcacggtttg ttgcgcctga acgaaagcaa aatggtgatg gatatgttcg
    14881 cccgcaactt gggtgtgaaa gtgatacacg tcgatgccga agggcagttt atggcgaaac
    14941 tcgccggcgt aaccgacccc gagaaaaaac gcaaaatcat cggtgcggaa tttatcgaag
    15001 tatttgatgc cgaagaaaaa aaacttacca acgccaaatg gttggcacaa ggcacgattt
    15061 accctgacgt aatcgaatcc gcaggtgcaa aaaccaaaaa agcccacgcc atcaaatcgc
    15121 accacaacgt cggcggcctg cctgaaaaca tgaagctcaa attgcttgag cctttgcgcg
    15181 atttgttcaa agacgaagta cgcgaattgg gtgtggcttt gggcctgccg cgcgaaatgg
    15241 tgtaccgtca tccgttcccg ggtccgggtt tgggcgtgcg tattttgggc gaagtgaaaa
    15301 aagaatatgc cgacctgctt cgtcaggcag acgatatttt cattcaagaa ttgcgcaata
    15361 ctaccgatga aaacggtaca tcttggtacg acctgaccag ccaggcattc gccgtgttcc
    15421 tgcccgtcaa atctgtcggc gtaatgggcg acggccgcac atacgattac gtcattgcct
    15481 tgcgtgccgt gattaccagc gactttatga ccgcgcattg ggcggaactg ccgtattcct
    15541 tgttgggcaa agtgtccaac cgcatcatca acgaagtcaa aggcatcaac cgcgtggttt
    15601 atgatgtgag cggcaaaccg cctgccacca tcgagtggga ataaacagca aacatggctg
    15661 ccccgtccgg cgcagtcctt cgattatcgg aaaaaaggaa aaaatatgag cacacaagat
    15721 ttaaacggca aaatcgcttt ggtaacaggc gcatcgcgcg gtatcggtgc agcaattgcc
    15781 gacacgctgg cggcagccgg tgccaaagtc atcggtacgg cgaccagtga gagcggtgcg
    15841 gcggcgatta gcgagcggtt ggcgcaatgg ggcagcgaag gccgcgtatt aaattccgcc
    15901 gaacctgaaa ccatcgaaag cctgattgcc gacatcgaaa aagcgttcgg caaactcgat
    15961 attctggtca acaacgccgg catcacccgc gacaacctcc tgatgcgcat gaaagaagaa
    16021 gagtgggacg acatcatgca ggtcaacctc aaatccgtgt tccgcgcttc taaagccgtt
    16081 ttgcgcggta tgatgaaaca acgttccggc cgcatcatca acatcacatc cgtcgtcggc
    16141 gtgatgggca atgccggtca aaccaactat gccgcggcaa aagcaggctt aatcggtttc
    16201 tccaaatcca tggcgcgcga agtcggcagc cggggcatta ccgtcaactg cgtcgcccct
    16261 ggctttatcg ataccgacat gacacgcgcc ctgccggaag aaacccgcca aacctttacc
    16321 gcccaaaccg ccttgggcag attcggcgac gcgcaagaca tcgccgatgc ggttctgttc
    16381 ctcgcttccg accaagcaaa atacatcacc ggccaaacgc tgcacgtcaa cggcggtatg
    16441 ctgatgcctt aacagacaac tttttcaacc atgccgtctg aagccctttc agacggcatt
    16501 tgcattctca ggcaaaatga acacacacca caccccgccc tgcccatgcg gctcaggcac
    16561 aagctgagac ctttgcaaaa ttcctttccc tcccgacagc cgaaacccca acacaggttt
    16621 tcagctgttt tcagctgttt tcgccccaaa taccgcctaa ttctacccaa ataccccttt
    16681 aatcctgccc ggacacctga taatcaggca tccgggtcac cttttaggcg gcagcgggcg
    16741 cacttagcct gttggcggct ttcaaaaggt tcaaacacat cgccttcaga tggctttgcg
    16801 cactcacttt aatcagtccg aaataggctg cccgggcgta gcggaattta tggtgcagcg
    16861 taccgaagct ctgttcgacc a
//
LOCUS       DAXHRP010000024        16604 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.024, whole genome shotgun sequence.
ACCESSION   DAXHRP010000024 DAXHRP010000000
VERSION     DAXHRP010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16604
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.024"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(62..1120)
                     /gene="dinB"
                     /locus_tag="ACFM72_000624"
     CDS             complement(62..1120)
                     /gene="dinB"
                     /locus_tag="ACFM72_000624"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HFC6257235.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
     gene            complement(1264..4353)
                     /locus_tag="ACFM72_000625"
     CDS             complement(1264..4353)
                     /locus_tag="ACFM72_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HFC6257236.1"
                     /translation="MNQNHFSLKILTVMLLSAYGGSFADGVVPVSDGNTVSLDTVNVR
                     GSHALLGKTEKTRSYTIDRMSTATGMRIAGKDTPQSVSVITRSRLDDKAVHTLEEAMK
                     NTTGVNVVRDSGLQTRFLSRGFYIDQIGEDGMTVNVAGRSGYTAKIDVSPSTDLAVYD
                     HIEVVRGATGLTQSNSEPGGTVNLIRKRPTASFKHTGELTADHRGSRRAVLDVSGSLN
                     KANTLRGRLVGAEEYKKSFKDRVWGRKHMVYGIAEADAGDSSVLTLGGMYQKSREVPD
                     FSGIILPCENQKTAPFSSTPACNRPLQLPRNTYLGEDWSRLSADKYNLFSGFKHVFDN
                     GWQLNAEVSYTKNESDAKVGQFFLKNEYAAGLSGEDAVGFLTEKNEVIPFEPKDKALE
                     KLKAYRDETAKEYRERKDDFVKNRFDNTAFEQYRSRRAAERKASFDKCMSDPFALDFI
                     CQGSWGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATANRRYSYMP
                     LRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRYRVRPNT
                     GATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWQAYDEKGNRTVYAEECRNAKKIKTEP
                     KLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGTPAFTGFSGTVPVWK
                     TVKVADDHVPALYNYAKYLNTNKTHSLTASTRFNVTGRLHLLGGLHYTRYETSQTKDM
                     PVRYGQPASDFQTASSIRADQDHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFK
                     QQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNRTVVDFGYVPG
                     AGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAER
                     LAKNSSADPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYG
                     LIDGFVRYELGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLDWQF"
     gene            4627..5406
                     /locus_tag="ACFM72_000626"
     CDS             4627..5406
                     /locus_tag="ACFM72_000626"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC6257237.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGNTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALTEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            5436..5558
                     /locus_tag="ACFM72_000627"
     CDS             5436..5558
                     /locus_tag="ACFM72_000627"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257238.1"
                     /translation="MDGQTDTARKPRRQKCRLKSSDGIFGHITCKRQHIPTQTD"
     gene            complement(5616..7001)
                     /locus_tag="ACFM72_000628"
     CDS             complement(5616..7001)
                     /locus_tag="ACFM72_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HFC6257239.1"
                     /translation="MIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEVALV
                     KFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELFSVLKGCVLV
                     AHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSIIERLGIVVED
                     RHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLREQLYGLPDG
                     MGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFPALGRLHAHK
                     VKAELVRHYGVDCYVSAKNLLKTFTTVRFEKGSDGILNAKTADLKNGVTDNPPTGLFA
                     NKKAARRALSSWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLAF
                     AHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKDLPDAFKAKF
                     KTDRKNIKEIG"
     gene            7119..7195
                     /locus_tag="ACFM72_000629"
     tRNA            7119..7195
                     /locus_tag="ACFM72_000629"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7153..7155,aa:Arg,seq:acg)
     gene            7213..7287
                     /locus_tag="ACFM72_000630"
     tRNA            7213..7287
                     /locus_tag="ACFM72_000630"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7246..7248,aa:Glu,seq:ttc)
     gene            7846..9021
                     /locus_tag="ACFM72_000631"
     CDS             7846..9021
                     /locus_tag="ACFM72_000631"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HFC6257240.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(9362..9910)
                     /locus_tag="ACFM72_000632"
     CDS             complement(9362..9910)
                     /locus_tag="ACFM72_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HFC6257241.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAIRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(9913..11409)
                     /gene="ccoG"
                     /locus_tag="ACFM72_000633"
     CDS             complement(9913..11409)
                     /gene="ccoG"
                     /locus_tag="ACFM72_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HFC6257242.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAALKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAVFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYAEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            11937..13916
                     /gene="tkt"
                     /locus_tag="ACFM72_000634"
     CDS             11937..13916
                     /gene="tkt"
                     /locus_tag="ACFM72_000634"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HFC6257243.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQATVLPEGLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKEFGFTVDNVVDTVKSVL"
     gene            14057..15445
                     /gene="fumC"
                     /locus_tag="ACFM72_000635"
     CDS             14057..15445
                     /gene="fumC"
                     /locus_tag="ACFM72_000635"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HFC6257244.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(15510..16433)
                     /locus_tag="ACFM72_000636"
     CDS             complement(15510..16433)
                     /locus_tag="ACFM72_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC6257245.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKWRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAVSAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
BASE COUNT         4153 a         4739 c         3869 g         3843 t
ORIGIN      
        1 agccatgccg tctgaaaacc gttcagacgg catatttttt ggacggcgcg cgtaaagcgg
       61 tttacgccca caaatcctgc tgctggtttt tcggcacaag atgccccacg ccgataccga
      121 taaggcggaa cgcgtcttcc gtctgcggcg ggacgcgcgc catcaacatt tgcgcagcct
      181 gcagcagagc tgcgcagtcg ggcaatacgg aggaataagt cagtgtgcgc gtgatgatgc
      241 ggaaatcgta ggtcttcagc ttgagcgtta cgctttgggc ttcgacgttt ttgcgcgtga
      301 tttgccgcca caagtcttcg gcaagatggg ggaggtgtcc ggcagcctgc tcgagcggca
      361 ggtcttcggg cagggtaatt tctgtggaga tttggaggcg ttcgcgttcg gctttgacgg
      421 ggcgttcgtc cgtaccgcgc accaaatcat agaggcggta tccgtagcgt ccgaaatggt
      481 ttaagagttc gccgcgctcg aaacggcgca agtcgcccgc cgtccgcata cccagcgact
      541 gcattttttt cagcgttacc ttgcccacgc cggggatttt gcccaaaggc agggtttcca
      601 aaaatgccat gactttgtgc ggcggcaaca caaactgccc gttcggcttg cgccagtccg
      661 acgcgatttt cgccagaaat ttgttcggcg cgatgcctgc ggatgcagtc aaacctgttt
      721 ccgcaaaaat ggcggcacgg atttctttgg caacttcact ggcgtaaggg atgtttttga
      781 aattacgggt aacgtcaaga taggcttcgt ccagcgacaa gggttcgatt aaatcggtat
      841 aacgcctgaa tacggcgtga atctgcgcgg aaacctgacg gtacaaatcg aaatgcggcg
      901 gcacatacac cgcttgcgga cacagccttt tcgccgttgc caccgacatc gcggaatgca
      961 gcccgaactg ccgtgcctca tacgatgcgg cgcaaatcac cgaacgcgcg ccctcccacg
     1021 cgacgaccac cggccgccct ttcaaatgcg gctgttcgcg cagctctacc gatgcgtaga
     1081 atgcgtccat gtcgatgtgg ataattttgc gtgaagacat cggctcttct gaggataaaa
     1141 gggatattct actgccggca tcgggcaaat tccaaatata cgccccgata gacctgcctc
     1201 cataaaaatg ccgtctgaaa cataccctgt ttcagacggc atccgcaaaa ctacggtttt
     1261 caattaaaac tgccaatcca gtttcatgct gacagtgcgc ggctctccgt agaagttgtt
     1321 tgcgccgcgc gtacggttgt agttgttctc aaaataagtg cgtccgttta agttcgtacc
     1381 gatgaggctc aatttggcgt gtttgcccaa ttcgtaacgg acgaaaccgt ctatcagccc
     1441 gtagccgccc tgcctgatgt tatacagact gcttgtgccg ctttgtgcgg acacgccgcc
     1501 gccgacggtc agccccgtat tcggtatatg gaagctcgtt ccgaaacgga atatgtgcac
     1561 gggtgtgaaa ttgctgaagt tgtacgggtc tgcactggaa tttttggcaa gacgttcggc
     1621 gttgacttcg gcggcgtttt tgtagcggct cttgttgtag gtgtaacccg caaagacttt
     1681 ccaatcttcg ttcaactcac ccgacaactc gaattccgca cccctgctga ccactttgcc
     1741 tatcggtttg gcaacggttt ggaacgaccc ctgcttgccg cctgctccgg gaacatagcc
     1801 gaaatcgacg accgtgcggt ttttctgttc gaggtaaaac aatgcgaacg aagcattcag
     1861 ccgtccttgc aagaacgcgc ctttccagcc tacctcatag tttgtgccga ccaaaggcgg
     1921 taaaacggtt ttggcactga catcgacatt atcctgctgt ttgaagattt tggtataact
     1981 tccgtaaata ctctgttgcg gtgtcaagtc ataggtaatg cctgcatagg gcgtcaattt
     2041 atgaccttgc atcttggccg tgtaatggtc ctgatccgcc ctaatgctcg atgccgtctg
     2101 aaaatcgctt gccggctgcc catagcggac aggcatatct ttggtttgcg aagtctcata
     2161 gcgcgtgtag tgcagcccgc ccaaaaggtg cagtcggccg gttacgttga aacgcgtgct
     2221 ggcagtcagc gaatgggttt tgttggtgtt gaggtatttg gcgtagttat acagcgcagg
     2281 aacatggtcg tctgccactt tgacggtttt ccaaaccggc accgtaccgg aaaaaccggt
     2341 aaaggcaggc gtgccgtcgg gattggtctc ctgaatcttg ttgccttttt cgtccagctc
     2401 atatacatcg acatataccg gtgtccggct gccgctgtat tcgtcatagt aatacacctg
     2461 cttgccttcg gcatcgagct tgggctcggt ttttattttc ttggcgttcc tgcattcttc
     2521 ggcataaacg gtacggttgc ctttttcatc gtacgcctgc caatcgggtt ctttatgccc
     2581 cctgaccaaa ggagacgaca aatcgccgtc cggctcctcc tgacaacttc ccgcatacac
     2641 gccgtgcgtt gcccccgtat tcggacgtac tctgtagcgg cgttcgtaga tttctagata
     2701 ttccgaacgt atcttttcat caccgtaggc atagccgaca aagaaatcat gctcccgccc
     2761 gaacagccca tatgtgccgg tcaggtcaag tttaattccc cattggcggt cgtctttggt
     2821 atgccgcaac ggcatataac tgtatcgtcg gttggcggta gccttccgat taaaggaaga
     2881 gtcatacagg ctgtttggaa aacgttgtgc cgcattatta aagatgccct ccttcgcaag
     2941 ggctttatcg acaaattccg ccttgtcggc atcaacgccc ggatcccccc aagaaccttg
     3001 acagataaag tccagcgcga aagggtcact catacacttg tcaaaactgg ctttgcgttc
     3061 tgcggcacgg cggctgcgat actgttcgaa agcagtatta tcgaaacggt ttttaacaaa
     3121 atcgtctttg cgctcccggt attccttggc ggtttcatca cgatatgctt tcagtttctc
     3181 caatgcctta tctttcggct cgaacgggat gacttcgttt ttttcagtca aaaagcctac
     3241 cgcatcctca cccgacaaac ccgccgcata ttcgtttttc agaaaaaact gccccacctt
     3301 cgcatcggat tcattcttgg tataagacac ttcggcattg agctgccaac cgttgtcaaa
     3361 cacatgtttg aatcctgaga aaaggttgta tttgtcggca cttaaccgcg accaatcctc
     3421 ccccaaataa gtgttgcgcg gcagttgcaa aggccggttg caggcaggcg ttgaactgaa
     3481 cggggcagtt ttctgatttt cacagggcaa aataatgccc gaaaaatcag gaacctccct
     3541 actcttctga tacatgccgc ccaaagtaag cacactgctg tcgcccgcat cggcttcggc
     3601 aatgccgtaa accatatgtt tcctgcccca aacgcggtct ttaaacgatt ttttatactc
     3661 ttccgcaccc accaaccttc cgcgtaaggt attcgcctta ttcaggctgc ctgaaacatc
     3721 caacactgca cgccggctgc cgcgatggtc ggcggtcagc tctccggtat gtttgaaaga
     3781 agcggtaggt cgcttacgga tcaaattgac ggttcctccc ggctctgaat tggattgggt
     3841 caaccccgtt gcaccccgta caacttcaat atggtcataa accgccaaat cggtactcgg
     3901 agacacgtcg attttcgccg tatatcccga acggcctgca acattgacgg tcataccgtc
     3961 ttcaccaatc tgatcaatat agaaaccgcg tgacaaaaac cgcgtctgca agcctgaatc
     4021 gcgcacaacg ttgacacccg tcgtgttttt cattgcctct tcaagcgtat gcaccgcctt
     4081 atcgtcaagg cggctgcgcg tgatgacgct gaccgactgc ggcgtatcct tgcccgcaat
     4141 cctcatacct gtggcggtgg acatccgatc tatcgtataa gaacgggtct tttcggtctt
     4201 gcccaacaaa gcatgagagc cgcgtacatt gaccgtatcc agactgacgg tattgccgtc
     4261 tgaaacaggc acaacaccgt ctgcaaaaga accaccgtaa gccgataaca gcataacggt
     4321 cagaatttta agtgaaaaat gattttgatt catagagacc tctgtaatat gcaagtgtgc
     4381 aaatcgtcca aaggctctca caactgtttt gattttttat attaattgaa aaaaagtaat
     4441 tctcaattaa atttatagat aggattgtat tcccattttg acaaaaaaca aactactcct
     4501 taccgtttat ttcaaaaaac gataacattg tattgaaaaa tatccgaatt taaatacaga
     4561 ccgccaatgc agaaaaaaac acccaaattg gctataatcc cgacaaacac actcaaggac
     4621 aacaacatgg cagcctcgcc cgaagcaaaa ttcaccgaag aaaagatttt gtgggtcaaa
     4681 caccacacgc cgaaactcat cactttcgcc atcagccgtc ccgaatccta ccgctttaaa
     4741 gccggacagt tctcccgact cggtttctac gaaggggaag gctttatttg gcgtgcctat
     4801 tccattgttt ccgcagaata tgccgacacg ctcgaatatt ttgccgtact catccaagac
     4861 ggccccatgt cggcccgttt cgccaaaatg caacagggca acaccatcct gctcgataaa
     4921 aatgccaccg gcttcctcct gcccgaacgc ttccccgacg gcaaggattt ggtgatgctc
     4981 tgcaccggct cgggcatcgc ccccttcctt tccattctcg aacaacccga aatccgtcaa
     5041 cgtttcgata ccgtcaacct gatacattcc gtatcttttc ccgaagaatt gattttcaac
     5101 gaccgactcg ccgcattgac tgaacatccc ctggtaggcg aatacggaca ctctttccgt
     5161 ttcgtccctg ttaccacccg tgccgccaac ccctcgggct taagcggaaa acgcattccg
     5221 gaactcttaa aaaacagcag catcgaacag gcgctgcata ccaagttcac cccggaatcc
     5281 acacggttta tgatttgcgg caacccggaa atggtcaaag atactttcca aacgctgctt
     5341 gacatgggtt acgccatgca ccgcaaccgc attcccggtc aaatcatgat ggaaaacggc
     5401 ttctaaaaac caccctgctt gtccgatgcc ttcggatgga cgggcaaacc gacacggcac
     5461 gaaaaccgcg tcggcaaaaa tgccgtctga aaagttcaga cggcatcttc ggacacatta
     5521 cctgcaaacg gcaacacatt ccaacccaaa ccgattaggc aatcaatacg aacggctgtt
     5581 tacatactta ccggctttca tcaaccggta tcgatttaac cgatttcctt aatatttttc
     5641 ctgtccgttt taaacttcgc cttaaacgca tccggtaaat ctttatcgaa ataccaaagc
     5701 ccgtcaccca tttccaatgc gccgcccatt ccatgcagaa caactttttc ccccgttaaa
     5761 ggatcagttt cggtaatttc tacctcatgc atttttcccc aatccaaaat aggcaacttg
     5821 tgtgcaaacg ccaaaacctg ttcgtcagaa cggccgcacg ccttatcgca tcggcctgaa
     5881 acatatacgg gacaaggctc atcctctgca taaccgtccg gcaggatacc ggctgcggca
     5941 ggacacaatc cgtatgtttc cgcccacgac gacaaagccc gtctcgccgc ctttttattg
     6001 gcaaataatc cggtaggcgg attatccgtc acaccgtttt ttaaatctgc tgttttcgca
     6061 ttcaatatgc cgtctgaacc tttttcaaac ctgacggtcg taaatgtttt aagcagattt
     6121 ttggcagata cgtaacaatc caccccataa tgcctgacca attccgcttt aaccttatgg
     6181 gcatgcagcc tgcccaatgc gggaaaaaaa cggacttcct ccgtattgca ccaatcaaac
     6241 ggggcttttc cggagtccaa taaagccgaa acctcgctat atacccgttc aaacgtaccg
     6301 atgtaattta ctttccctcc gccgtcgaaa caggccagca cccccatacc gtcaggcaaa
     6361 ccgtacaact gttccctcaa ccgttcgggc agcgcggcag gcaacggttt cggattcatc
     6421 aaacggaaac actgcctgat ccactcctcg accccgtgtt ccgacaggct gtattccaaa
     6481 taatcacaca acgccgacac atccgccatc gcacgatgcc tgtcttccac aacaatcccc
     6541 aacctttcga tgatactgtc caggctgtgc ttgtaaaatt gcggatacag acaccgggac
     6601 agctgcacac tgcacaaagc aggcgatgaa aatccgatac ccgcacgatg aaactcatgc
     6661 tttaaaaacg tatagtcgaa acggctgtta tgtgcaacca gcacacaacc cttcaatacc
     6721 gaaaacaact cgccggcaat ctctgcaaaa acaggcgcat cggcaaccat gccgtctgaa
     6781 atccccgtca gccccgccac aaactgcgga atcggttttt gaggattaac caaccactca
     6841 tgcctcacca cccttccctg ctcaaacttg accaaagcca cttcggttac cctgtcttca
     6901 tacagattgc cgcccgtcga ttccaaatcg accacggcaa caggcattcc aaaccgtaaa
     6961 aatacctttt ccagcaaggg ccagcgggaa gcaacaatca ttttattctc tttaaattca
     7021 aacaacaaac cgatatttta cacttttaag gcatttcatc caacaaaaca attgacagaa
     7081 tccgatgatt accctaaaat tcaaatcttt cttgcagtgc acccgtagct cagttggata
     7141 gagtatctgg ctacgaacca gagggtcggg cgttcgaatc gctccgggtg cgccagtaag
     7201 aaaatacaat atgcgcccat cgtctagcgg ttaggacatc gccctttcac ggcggtaacc
     7261 ggggttcgat tccccgtggg cgtgccaaat tccaaatccc ccgaaataat ccctcgggga
     7321 tttttattgc ctcggcaatt cattaccata tctttaccta cccccttcat cagactctca
     7381 gacgtaatcg aatcatattc aaacctttgc cgtgcaaacc gatatcacgt aaccggatgc
     7441 ggtgtccgtc caacatttta cccgattgaa acgcctgata tattgcaccc catcaacgtg
     7501 gcattacttt tcttaacaat cccctttgac agcaactgac tagggctttt ttatgccatc
     7561 atcaaattta tagtggatta actttaaacc agtacggcgt tgcctcgcct ttccgtacta
     7621 tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaattcac tataatattt
     7681 tctctcccga ttgaaacagg cgtaacagaa tatgcccgaa gctccggctg ctttcttgtt
     7741 taccgccgcg atatttagag tataatacca aatttgagca atagttctaa aacagttaga
     7801 accatttttc atgagcctga ctgattcgta tactcggaga aactgatgca aaatattttt
     7861 gaccctttgg ttattcgtgg aaaatccctt acccccatcg tgcaaggcgg tatgggggtc
     7921 ggtgtttccg catcgggttt atccagcgcg gtggcacgtg aaaacggtat cggaacgatt
     7981 gccagtgtgg atttgcgcca ccttcacgaa gacctactcg ccgaatcaca aatcaatccg
     8041 agtgaagaga aatatacatc tttgaactgt accgcattag acagggaaat ccaaaaagcc
     8101 aaaagcgctt cagagggaaa aggactgatt gcggtcaacg tgatgaaggc ggtcaaagac
     8161 cacgccgcgt atgtccgcca ggcttgcgaa tcaggggcgg atgcggttgt aatgggtgcc
     8221 ggcctgcctt tagacctgcc ggaaatgacc gagggctatc ataaagatgt cgcgctgctg
     8281 ccgattctgt ccgaatcgcg cggtattaat atcgtcttga aacgttggat gaaaaaaggc
     8341 atattgcccg atgcgattgt agtcgaacat cctgcccacg cggccgggca tttgggcgcg
     8401 tcaaccgtcg aaggcgtaaa cgatgctaaa ttcgacttca aacgcgtgat tgaggaaacg
     8461 tttgaagttt tcaaaagttt agggctggaa agcgaaaaaa tcccgcttat tcttgcggga
     8521 ggcatggcaa attttgaaaa agtcaaaacc gccctaaaga actggggagc atccgccgtt
     8581 caaatcggta cggcttttgc cgttaccgaa gaaggagatg cacaccttaa cttcaaaaaa
     8641 acgctcgccg gtgcggaaac tgaaaaagta gtcgaattta tgtctgttgc cggtttgccg
     8701 gcgcgcggtg tccgcaccaa attcctagac agctacatca agcgtgaaag caaacttcag
     8761 acaaacgcca aagccgaccc gcgccgctgt acccaaggtt taaactgcct aaccagttgc
     8821 ggtctgcgcg acgggctttc caaagccgga caattctgca ttgatatcca gcttgccgcc
     8881 gcattccgtg gagaagtaga taaaggcctg ttcttcagag gtaaagaccc gctgcccttc
     8941 ggcaatgcca tccgcaccgt ccgcgagacg atacaatatc tgctgacggg gagcgaacct
     9001 gttgcaacgc tcggacgctg acatcaggta ggatttgatt tgcaaacaaa atgccgtctg
     9061 aagcctttca gacggcattt ttcaggctgc gtttcggaat agtgtcgaaa aaacggagag
     9121 aaataaaaac gtttttatgt aaacaaaacg ccttccgcat tgtgtcgggc atacaacaca
     9181 aatgccgtct gaagcccttc agacggcatt tttcaggctg catttcggaa tggtgttaaa
     9241 aaataaacgg gataagatac atttattttc gtccgataaa tcagaccatc acgccgaata
     9301 atcaaacaat gcctgcccga cattgcatct ggcaaaccaa tgcaatgaaa acacggcttt
     9361 tttatttgct tccggcatta ttgaaaagtt tatccatcgg ggtcagatcc accgcattcc
     9421 cttggctggt aatccatttg ttctcgacgc gccacacgcc tgccgcgtcc tccacgcgca
     9481 cataccagtg gttggtcggc gaaagggttt tgaacaccgc ctcatattcc gccctgccgt
     9541 tctgcgcgct gccgacgggc ttgagggcga cggtttgatc gtccgccttg cgggtcgggt
     9601 gcatcagcag caggttcaaa ggctgtttgc cgtcaaactc gccgccgaca aacacttttg
     9661 ccgcattcat atcgggggaa atgagaacct gcaccccgat atgccgtctg atggcttctt
     9721 catcccgatg aagctggatg tcgatatgtt tgccgtcttt ataataatcg tccgtaacca
     9781 aatctgtcgc gtgctgctgc gcgacaaaaa acatagcgac gctggcgatg acgacaaaaa
     9841 tcggccccgc catcaagatc cacggccaga cgtgtttgta ccaaggtttg attggagtgt
     9901 tttgagacac ggttattctc cgataaaggt tgcatcttct tccaagacga ccggcttgcc
     9961 gtcgggcgcg ccgctttcgc ggtattggaa ggtaaattcg atagggtggc tgcctttgtc
    10021 cgcgtattcc ggaatggtgg acacttggac gggaagggtt accgtttcgc gcggggcaac
    10081 cttgataccg ccttcgggca gcccggtcag ggcgatttcg tcaaagcctt tgacacttgc
    10141 ggtaatgagc tgttcttttt cacttttgtt gatgatacgc aggctgtatg cgttttccag
    10201 ccagcctttg gcgttttcgc gcaccagtac gccacggtct ttcaaaatat cgacctcgac
    10261 cattttgcgc gtggacaaac cggccaggaa ggcaatgata actaacgcca acaccgcgcc
    10321 gtaacctgcc acgcgcggtc tgagcagccg ttttttaatg tctttttcgg catattcgtg
    10381 ttccaacgcg ctttcggtcg tataacggat taatccgcgc ggatagccca ttttgtccat
    10441 aatctcatcg cacgcgtcga tacaggcggc gcagccgata cattggtatt gcagaccgtt
    10501 gcggatgtcg atgccgacgg ggcagacttg gacgcacatc gcacagttga tgcagtcgcc
    10561 caaacccgcc tcttccttgt tgaccgtttt cttgcgggct ccgcgcggtt cgccgcgttc
    10621 cgcgtcataa gaaacaatca gcgtgtcctt gtcgaacatc gcgctttgga aacgtgcgta
    10681 cgggcacata tgcaggcaca ctttttcgcg catgatgtgg gcgaagaaga aggtcataaa
    10741 gccgtaaaac gctgcggcaa acaccgcgcc gccgcctgct gctccggtga ataaatcggg
    10801 aacgaactgg cggataggga caaaccagcc tgcaaacgtg atgcccgtcc acgcgcagac
    10861 aaggaaaatc agcaggtatt tggtggcttt gatgcggatt ttagtgaaat tccacggcga
    10921 tttttccagt ttcagccgtt tgtttctatc gccttcgacc aggttgtcga tccacagcat
    10981 aatttcggtg taaaccgttt gcgggcagga atagccgcac cacagtcgcc cggcaatcgt
    11041 cgtccaccaa aacagcccga aggcgcaaat catcagcagc aaggcaaggt aaatcaaatc
    11101 gcccaccccc aacgacaatc cgaaaatgaa gaaatgccgt tcggggatat tgaaaacgac
    11161 agcctgcctg ccgctccagt tgaaccacgg aatcacataa aacacaaact gcgtcgccaa
    11221 tacggcggcg atacgcagtt tggcgaaccg tccttccgct tttttcggat ggatgcgttc
    11281 gccttcggga tggatttgaa tcacgctggc acgcggatca aacgtttttt tcgctttcag
    11341 cgcggctttt gtttgttcgg acgtgccgat tccggatgcc ggactgccgg cttggttttc
    11401 cgtggtcatt ctgcattcct tagatttttg attgatggtt tgcccgttac cgccgccgtt
    11461 tgcttttcag acgtcatttt tcttgttttt taaggcgttg tgtttcaagt tttgagaaaa
    11521 tccgtttttc ccaaaatata tttccgctat tgtacaactt tatgcgccgt ccggatgtat
    11581 ggggcggata catttcccat ccgcatcaaa acgcctggat tttaccttac cgcccgaaca
    11641 aaatccgaat acggttaaaa aaaaagacta aaaaaaccga cacccccata tcggcagaac
    11701 cgacggcgca agctcataaa caaacgctat cgacaatccg gcacacaatc tataactttt
    11761 tatttcaaaa ggaataatgg caggcttcgc ctgcaaatcg aaaatccttc cccaccggtc
    11821 tcctgccgcc gcattccccc gcgtccgccc ttttcttgaa agcataagcg aatcgggcga
    11881 taatcaacgc tttccgatta tccacttatc caaaacacca gcaaggaaaa tacaaaatgt
    11941 ctcaactggc aaacgcaatc cgcttcctct cggccgatgc cgttcaaaaa gccaattccg
    12001 gccaccccgg cgcgcctatg ggtatggcgg aaatggcgga aacattgtgg acgaaattcc
    12061 tcaatcacaa ccccgccaac cccaaattct acaaccgcga ccgcttcgtc ctctccaacg
    12121 gccacgcgtc tatgctgttg tacagcctgc tgcacctgac cggctacaat ctgagcattg
    12181 aagacttgaa aaacttccgc caactgcaca gcaaaacccc cggccatccc gaatacggct
    12241 ataccgacgg cgtggaaacc acgaccggcc cattggggca agggattgcc aacgcggtgg
    12301 gtatggcatt ggcagaaaaa atccttgccg ccgaatttaa taaagacggt ttgaacatcg
    12361 tcgatcatta cacctacgtc tttatgggcg acggctgtct gatggaaggc gtatcgcacg
    12421 aagcctgttc gctcgccggc accttgggct tgggcaaact gattgttttg tatgatgaca
    12481 acaatatttc cattgatggt aaagtggacg gctggtttac cgaaaacatc ccgcaacgct
    12541 ttgaaagcta cggctggcac gtcgttccca atgtaaacgg tcatgacacc gccgccattc
    12601 aagccgccat cgaagccgca cgtgccgaaa ccggcaaacc gtccatcatc tgctgcaaaa
    12661 ccttaatcgg caaaggcagt gccaacaaag aaggcagcca caaaacccac ggcgcacctt
    12721 tgggcgcgga cgaaatcgaa gccacgcgca aacatttggg ctggacttac cccgcctttg
    12781 aaatcccgca agaaatttac gatgcgtgga atgccaaaga acaaggcgcg aaactggaag
    12841 ccgactggaa cgaactgttc gcgcaatatc aagccaaata tcctgccgaa gccgcagaat
    12901 ttgtgcgccg tatggataaa aaactgccgg aaaactttga cgagtacgtt cagacggcat
    12961 tgaaagaagt gtgcgccaaa gccgaaacca tcgctacccg caaagccagc caaaacagca
    13021 tcgaaatctt ggcaaaagag ctgcccgaac tggtgggcgg ttcggccgac ctgaccccgt
    13081 ccaacctgac cgactggtca aacagcgtct ccgttacccg cgacaaaggc ggcaactaca
    13141 tccactacgg cgtgcgcgag ttcggtatgg gtgcgattat gaacggtctt gccctgcacg
    13201 gcggcgtaaa accctttggc gcgaccttcc tgatgtttag cgaatacgaa cgcaacgcct
    13261 tgcgcatggc ggcactgatg aaaatcaacc ctgtatttgt gttcacccac gattccatcg
    13321 gtttgggcga agacggcccg acccaccagc cgattgagca aaccgccacc ctgcgcctga
    13381 ttccgaacat ggacgtatgg cgtccgtgcg acaccgccga atctctggtg gcttgggcag
    13441 aagccgtcaa agccgccgat catccgtcct gcctgatttt cagccgtcaa aacctgaaat
    13501 tccaagcgcg cagcgaacaa caactgaacg acatcaaacg cggcggctac atcatcagcg
    13561 aagcccaagg caacgcgcaa gccgtcatca ttgccaccgg ttccgaagtc gagctggctt
    13621 tggaagcgca aaaagccctc gccgcgcaaa acatcgccgt acgcgtcgtt tccatgccgt
    13681 ccaccaacgt attcgaccgc caagacgccg cctatcaagc caccgtcctg cccgaaggtc
    13741 tgccgcgcat cgccgtagaa gccggacacg ccgacggctg gtacaaatac gtcggtttga
    13801 acggcgcagt cgtcggcatc aaccgcttcg gcgaatccgc ccctgccgac ttactcttca
    13861 aagaattcgg ctttaccgtg gacaatgtgg tcgatacagt gaaatccgtg ctgtaaaccc
    13921 acacctaaac aaatgccgtc tgaacgcttt tcagacggca ttttcacacc ctccctcctt
    13981 aatgcttcct cattccacca atctccatta taatatttgc gaatcactct tattcacatt
    14041 tcaaaaggag aaacgtatga acactcgcac cgaacacgac accatgggca atgtcgaagt
    14101 cccgtccgaa gcctattggg gcgcgcagac ccagcgcagc cgcaacaatt tcaaaatcgg
    14161 cggcgaaacc ctgccgcagc cgctgattta tgctttggcg ttggtgaaaa aagccgctgc
    14221 cgcgaccaat gtttccctcg gcaggattaa gccggaacag gcggatttga ttacgcaggc
    14281 ggcggatgat gtgttgaacg gcaggcttga cggacagttt cctttagtgg tttggcagac
    14341 cggctccggc acgcagtcca atatgaacat gaacgaagtg ctggcaaacc gcgccaacga
    14401 aatcgccggt acgggtttgg cggcttatca gcccgtccat cccaacgacc atgtgaacca
    14461 cgcgcaatcg accaacgacg cattcccgac cgctatccac gttgccgccg cgattgaaat
    14521 caaccgccac ctcatccccg ccgtaaaagc cctgcgcgat accttggaca aaaaagccca
    14581 agctttcgcc cccattgtta aaatcggccg cacccacttg caagacgcga cgccgctgac
    14641 tttgggacag gaattttccg gctacgtttc ccagcttgat cacggtttag gccgtctgaa
    14701 cgatgcgctt aaagacttgt atgaacttgc tttgggcggt acggcggtcg gcacgggttt
    14761 gaacagccat cccgaatacg ccgaaaaagc tgctgctaaa ctcgccgaac tgtctggctt
    14821 gccgtttgtc agcgcgccga acaaatttga agccttgggc ggacgcgatg ccgccgttgc
    14881 cgcttcgggc gcattgaaaa cgctggcggc aagcctgaat aaaatcgcca acgacatccg
    14941 ctggctggca agcggcccgc gttgcggttt gggcgaaatc aaaatccccg aaaacgagcc
    15001 gggttcgtcc atcatgccgg gcaaagtcaa cccgacccaa tgcgaagcaa tgacgatggt
    15061 gtgctgccaa gtgttcggca acgacgttac catcggtatg gcgggcgcgt cgggcaattt
    15121 cgagctgaac gtctatatgc ccgttatcgc ctacaacctc ttgcaatcca tccgcctctt
    15181 gggcgacgcg tgcaacagct tcaacgaaca ctgcgccgtc ggcatcgaac ccgtaccgga
    15241 aaaaatcgac tatttcctgc accattccct gatgctcgtt accgcgttaa accgcaaaat
    15301 cggttacgaa aacgccgcca aagtcgccaa aaccgcctac aaaaacaaca aatcgttgcg
    15361 cgaaaccgcc gttgagttgg gcttgctgac gggcgaagaa tttgacgaac tggtcgttcc
    15421 tgccgatatg gttcatccgc gctaatcttt ccctcaaata aaatgccgtc tgaaacctcg
    15481 ttcagacggc attttccgtt gcctgcgaac tagcggcgtt tgaacagcct gtcccccacc
    15541 gccgccgtaa ccgcaccccc gaccacgacc agtgcgccaa cataacccaa accgttcata
    15601 tccggcgcgg caaaagtatc aggcatcaca taatgcccga gcaaagaaaa tattacggta
    15661 aacacgggga gcaaggttgt taccgcgctg actttggaag cctcccaatg tttcaacgcc
    15721 tcgccgaacg agccgtaacc gattaacgta ttcaagcagc aatacgcaaa acaaacccac
    15781 gccaacgtac cgtccaaact tccgatgtgt gccggttcgg caaacggcag gaacacggcg
    15841 gcacttaccg cataaatcaa cagcagaatc tgttgcggtc cgaattgcgc cgacagcagc
    15901 ttttgcgcca cggcataaca cacccatgcc atactgcctg ccgcacacag caacacgccc
    15961 ttcgcatacg cgcccaaacc cgacaactcg ccgaatttat cgttaaaaaa cataagcaaa
    16021 ccggcaagca gcaaaaccaa gccgattttc tgagcggcag tcatccggtc tttaaacacc
    16081 aacacaccga caacaatcat cgtaaacggc gaaatctgcc acaaaacctg cgtcgtggtc
    16141 ggcgaaatat aatgcagccc ttgggcaatc agcacaaagt ttgccgaaat gcccgccacg
    16201 ccgagcagca gcagcctgaa tgagcaccaa gaaaaatccc gccacttcgg cagccgcccg
    16261 cccaatgcca gcaaaacaaa caataccgcc gccgccacgg taaaacgcac ccacaccagc
    16321 gtcggcgcat cgacaaactt caatacctgc cgcacggcaa tcggcagcgt tccccacgtc
    16381 atcgccgcca aaagtgccaa cgcgaagcct aggagcggcc tttggttttc catcctgatt
    16441 ttcctatttt taaacaaccg tattgccgga cgatgccggt ttgccgcatc gggcaatgat
    16501 ggttcaagcg tttgacgttt gattccaacc ctttgatttc aaacaaaccg gctgaagctc
    16561 ggctattgct tcgcgctatt tgaaaacacc gcctgaattt taaa
//
LOCUS       DAXHRP010000025        16493 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.025, whole genome shotgun sequence.
ACCESSION   DAXHRP010000025 DAXHRP010000000
VERSION     DAXHRP010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16493
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.025"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            210..1274
                     /locus_tag="ACFM72_000637"
     CDS             210..1274
                     /locus_tag="ACFM72_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HFC6257246.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGPGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1415..1738
                     /locus_tag="ACFM72_000638"
     CDS             1415..1738
                     /locus_tag="ACFM72_000638"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HFC6257247.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1810..2133
                     /locus_tag="ACFM72_000639"
     CDS             1810..2133
                     /locus_tag="ACFM72_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HFC6257248.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEVVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQLLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2180..2383
                     /gene="tatA"
                     /locus_tag="ACFM72_000640"
     CDS             2180..2383
                     /gene="tatA"
                     /locus_tag="ACFM72_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HFC6257249.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2387..3070
                     /gene="tatB"
                     /locus_tag="ACFM72_000641"
     CDS             2387..3070
                     /gene="tatB"
                     /locus_tag="ACFM72_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HFC6257250.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAETLGNDGQIGGTAEPSE
                     TDKDRAWREYLTAPSSPAVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSRA
                     KPKLRVRKS"
     gene            3085..3855
                     /gene="tatC"
                     /locus_tag="ACFM72_000642"
     CDS             3085..3855
                     /gene="tatC"
                     /locus_tag="ACFM72_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HFC6257251.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGMMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTGQLKHARPYVIVGAFVIAAVITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIRPPAKT"
     gene            3908..4513
                     /locus_tag="ACFM72_000643"
     CDS             3908..4513
                     /locus_tag="ACFM72_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HFC6257252.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYRVVKLPADIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPHSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGNAENRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIGGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4529..4882
                     /locus_tag="ACFM72_000644"
     CDS             4529..4882
                     /locus_tag="ACFM72_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HFC6257253.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4872..6686
                     /locus_tag="ACFM72_000645"
     CDS             4872..6686
                     /locus_tag="ACFM72_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HFC6257254.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACKSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIHDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6876..7553
                     /gene="misR"
                     /locus_tag="ACFM72_000646"
     CDS             6876..7553
                     /gene="misR"
                     /locus_tag="ACFM72_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HFC6257255.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7567..8973
                     /gene="misS"
                     /locus_tag="ACFM72_000647"
     CDS             7567..8973
                     /gene="misS"
                     /locus_tag="ACFM72_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HFC6257256.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMAEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9091..11517
                     /locus_tag="ACFM72_000648"
     CDS             9091..11517
                     /locus_tag="ACFM72_000648"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC6257257.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALLAEAL
                     HLPPYRHTTHNAVQFQFDSHPIYGNILTVRYAGQTTAALPPFTTQDSLHIAQFAELED
                     PQTLNQFLHILTTLSDHNLHIGKIILNLNGGQYNTDFDLKAPETQNAPGRKTTSKTVQ
                     TLEHAAAKMQSAAQYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLPPYPEA
                     HPKTLSLKNDTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11562..11807
                     /gene="rpsP"
                     /locus_tag="ACFM72_000649"
     CDS             11562..11807
                     /gene="rpsP"
                     /locus_tag="ACFM72_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HFC6257258.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11823..12332
                     /gene="rimM"
                     /locus_tag="ACFM72_000650"
     CDS             11823..12332
                     /gene="rimM"
                     /locus_tag="ACFM72_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HFC6257259.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNGELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12332..13081
                     /gene="trmD"
                     /locus_tag="ACFM72_000651"
     CDS             12332..13081
                     /gene="trmD"
                     /locus_tag="ACFM72_000651"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HFC6257260.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKTQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13097..13462
                     /gene="rplS"
                     /locus_tag="ACFM72_000652"
     CDS             13097..13462
                     /gene="rplS"
                     /locus_tag="ACFM72_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HFC6257261.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13784..14509
                     /locus_tag="ACFM72_000653"
     CDS             13784..14509
                     /locus_tag="ACFM72_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HFC6257262.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPSTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPDWCAS"
     gene            14544..15419
                     /locus_tag="ACFM72_000654"
     CDS             14544..15419
                     /locus_tag="ACFM72_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HFC6257263.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15496..16410
                     /locus_tag="ACFM72_000655"
     CDS             15496..16410
                     /locus_tag="ACFM72_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HFC6257264.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSSDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALINAMKQ"
BASE COUNT         4295 a         5279 c         3624 g         3295 t
ORIGIN      
        1 gccgtctgaa gccgattcgg ttttcagacg acatcattat ttgacctgac gcaaacagaa
       61 agccttccgc gtgcttaaac acatctcttg tagtaaaata tctaaacaga ttcaactgga
      121 aacggtcagg cttcttcacg ccattcccat ttcaaccgcc gcctgccaga ttcagacggt
      181 attcctactt gaaaacaagg agcgttacaa tgaaagcagc acgtttttac gacaaaggcg
      241 acatccgcat cgaagacatc cccgaaccga ccgtcgcccc cggcaccgtc ggcatcaatg
      301 ttgcctggtg cggcatctgc ggtaccgacc tgcacgaatt catggaaggc ccgattttca
      361 ttccgccttg cggtcatccg cacccgattt ccggcgagtc cgcacccgtc acgatgggac
      421 acgagttctc cggcgtggtc tatgccgtcg gcgaaggcgt ggacgacatc aaagtcggcc
      481 aacacgtcgt ggtcgagcct tacatcgtac acgacgacgt accgaccggc ccgggcagca
      541 actaccacct ctctaaagac atgaacttca tcggcttggg cggctgcgga ggtggcttgt
      601 ctgaaaaaat cgctgtcaaa cgccgttggg tgcatccgat ttccgacaaa atcccgttgg
      661 atcaagccgc tttgatcgaa ccgctgtctg tcggacacca cgcctatgta cgcagcggcg
      721 cgaaagcagg cgacgtcgca ttggtcggcg gcgcaggtcc gatcggtttg ctgttggctg
      781 ccgtgttgaa agccaaaggc atcaaagtca tcatcaccga gttgagtaaa gcacgcaaag
      841 acaaagcgcg cgaatccggc gttgccgact acatcctcga cccgtccgaa gtcgatgttg
      901 tcgaagaagt gaaaaaactg accaacggcg aaggcgtgga cgtggcattc gaatgtacca
      961 gcgtgaacaa agtgttggat actttggtcg aagcctgcaa acctgccgcc aatttggtta
     1021 tcgtatccat ctggagccac cctgcaaccg tcaacgtcca cagcgtcgtg atgaaagaac
     1081 tggatgtgcg cggcacgatt gcctactgta acgaccacgc cgaaaccatc aaactggtcg
     1141 aagaaggcaa aatcaacctc gagcctttca tcacccagcg catcaagctg gacgaactgg
     1201 tttccgaagg cttcgagcgt ctaatccaca acaacgaatc cgccgttaaa attattgtga
     1261 gtccaaacct gtaagcaaat tacatttgca acagcacaaa tgccgtctga aacgctcaga
     1321 cggcattttc caacgaagcg caacaggcgt attgcccgag agcagccgtt tagcctatca
     1381 ttccgaacaa acagaaacaa acagaaggaa aatcatggga gattccgtac tatccgccat
     1441 ccaacaaacc atcacccagc gaaaatctgc caatccgtcc gaatcttacg tcgcacagct
     1501 cttgcacaag ggcgaggaca aaatcctaaa aaaagtgatt gaagaggcgg gcgaagtgtt
     1561 gatggcatcc aaagacaaaa acccgtccca cctggtttac gaagttgccg acttatggtt
     1621 tcacaccatg attcttctga cacaccacga cctgaaggcg gaagacgtat tggacgaact
     1681 tgcgcgccgc caaggtttgt cgggcttggc cgaaaaagcc gctcgcacag aatcttgaat
     1741 ttatattaaa atccgcactt tcccacattc aatccgtctg accgctgttc agacggcatc
     1801 ggagccgtta tggacaactg tattttctgc aaaatcgccg ccaaagacat tccggcgcaa
     1861 accgtctatg aagacggcga agtggtttgt ttcaaagaca tcaaccccgc cgctccggtt
     1921 catctgctgc tgattcccaa agtccatttc gattcgttgg cacacgccgc gcccgaacat
     1981 cagctccttt tgggaaaaat gatgctgaaa gttcccgaaa tcgccaaagc ggcaggactg
     2041 gcagacggct tcaaaaccct gatcaacacc ggcaaaggcg gcggacaaga ggttttccac
     2101 ctgcatatac acatcatggg cacacccgta taaaccgtta tttcacaatc aacccctaat
     2161 acttacttaa ggatacatca tgggcagttt ttctctgacg cactggatta tcgtactgat
     2221 tatcgtcgtt ttgatattcg gcaccaaaaa actgcgcaac gtcggcaaag acctcggcgg
     2281 tgcggttcat gacttcaaac aggggctgaa cgaaggcaca gacggcaaag aagcccaaaa
     2341 agacgatgta atcgaacaca aaaaagacga agacaaagcg taatttatgt ttgatttcgg
     2401 tttgggcgag ctggtttttg tcggcattat cgccctgatt gtcctcggcc ccgaacgcct
     2461 gcccgaggcc gcccgcaccg ccggacggct catcggcagg ctgcaacgct ttgtcggcag
     2521 cgtcaaacag gaatttgaca ctcaaatcga actggaagaa ctaaggaagg ccaagcagga
     2581 atttgaagct gccgctgctc aggttcgaga cagcctcaaa gaaaccggta cggatatgca
     2641 gaacagtctg cacgacattt ccgacggtct gaagccttgg gaaaaactgc ccgaacagcg
     2701 cacgcctgct gatttcggtg tcgatgaaaa cggcaatccc tttcccgatg cggcaaacac
     2761 cctatcagac ggcatttccg acgttatgcc gtctgaacgt tccgatactt ccgccgaaac
     2821 ccttgggaac gacgggcaaa tcggcggcac agccgagcct tcggaaaccg ataaagaccg
     2881 cgcatggcgc gaatatctga ccgcaccttc ttcgcctgcc gtacagaccg tcgaagtcag
     2941 ctatatcgat accgctgttg aaacccctgt tccgcatacc acttcgctgc gtaaacaggc
     3001 aataagccgc aaacgcgatt tgcgtcccaa atcccgcgcc aaacctaaat tgcgcgtccg
     3061 taaatcataa agagggcaaa tccggtgtcc gaaacacaaa acgaacaacc cgtccaaccg
     3121 cttgtcgagc atctcatcga gctgcgccgc cgcctgatgt ggacggttgt cggcatctta
     3181 gtctgctttt tcggcatgat gccgtttgcc caacaactct atacttttat cgccgacccg
     3241 ctgatggcaa acctgcccaa agacaccagc atgattgcca ccgatgtcat cgcaccattt
     3301 ttcgtgccgg tcaaagttac cctgatggcg gcatttttaa tttcgctgcc gcatacgctc
     3361 taccaaatct gggcatttgt cgcgcccgca ctctaccaaa acgaaaaacg cctgattacg
     3421 ccgctcgtcc tctccagcgt cagcctgttt ttcatcggca tggcatttgc ctactttttg
     3481 gttttccccg tcattttcaa attccttgcc agcgttaccc ctgtcggtgt caatatggcg
     3541 acagacatcg acaaatacct ctccttcatc ttggggatgt ttgtcgcatt cggtacaacg
     3601 tttgaagtcc ccattgtcgt tatcctgtta accaaaattg gtgtggtaac aaccggacag
     3661 cttaaacatg cccgtcccta tgttattgtc ggtgcttttg tcattgccgc agtcatcaca
     3721 ccgcccgacg ttatttcaca aaccctgctt gccattccac tgattctctt atacgaagca
     3781 ggtatttggt tcggacgctt cttcactcca cgttcagaac aggatggcga catacggccg
     3841 cctgcaaaaa cctgacacta tgccgtctga agccccgcct cataccgcca cagattaagg
     3901 aatacctttg aataccctct atttaggttc aaacagccca cgcagaatgg aaatcctgac
     3961 gcagttgggc tatcgggtcg tcaagctgcc tgccgacatc gacgaaacgg tcagacagaa
     4021 cgaagaccct gcccgttacg ttcaaaggat ggcagaagaa aaaaaccgaa ccgccctgac
     4081 cctcttttgc gaaaccaacg gcacaatgcc cgatttcccc ctgattaccg ccgacacctg
     4141 cgtcgtttca gacggcatca tattgggcaa accccactcc caagccgaag caatcgaatt
     4201 tttaaaccga ttgtccggca aacaacatac cgtcctgact gccgtctgca ttcattatcg
     4261 cggcaatgcg gaaaaccgcg tccaaaccaa ccgcgtcgtt ttcaagcccc tgagttcgga
     4321 agaaatttcc gcctatgtgc aaagcggcga accgatggac aaagccggtg cctacgccgt
     4381 acaaggcata ggcggcatct ttatccaatc tatcggaggc agcttcagcg gcattatggg
     4441 gctgcccgtt tatgaaaccg tttcgatgtt gcaggatttg ggataccgta ccccaccttt
     4501 catccgagcc taacccgtaa agaccgccgt gaacagacaa accgcttacc tccttacctc
     4561 tttcagcctg atcgcactga taatcctgtc cctttcctgg gaactgtgga ttgcaccgtt
     4621 acgcccgggc ggctcgtggc tcgcgctcaa agccctcccc ctctgtctgc cgctttcagg
     4681 catcttgaaa aagaaaatct atacctacca atacagctcc atgctggttc tgatttattt
     4741 tgccgaagcc gtcatgcgcc tgttcgacgc ctatccggca gaacaaattt gcgccgcgct
     4801 ttccgcagta ttcagcatca tcttcttcat atcctgcctg tcgttcgtca aacaatacaa
     4861 ggaaacaaac aatgcccgct gaaacgaccg tatccggcgc gcaccccgcc gccaaactgc
     4921 cgatttacat cctgccctgc ttcctttgga taggcatcgt cccctttacc ttcgcgctca
     4981 aactgaaacc gtcgcccgac ttttaccacg atgccgccgc cgcagccgga ctgattgtcc
     5041 tgttgttcct cacggcagga aaaaaactgt ttgatgtcaa aatcccacct atcagcttcc
     5101 ttctgtttgc aatggcggcg ttttggtatc ttcaggcacg cctgatgaac ctgatttacc
     5161 ccggtatgaa cgacatcgtc tcttggattt tcatcttgct cgccgtcagc gcgtgggcct
     5221 gcaagagttt ggtcgcacac ttcggacaag aacgcatcgt gaccctgttt gcctggtcgc
     5281 tgcttatcgg ctccctgctt caatcctgca tcgtcgtcat ccagtttgcc ggctgggaag
     5341 acacccccct gcttcaaaac atcatcgttt acagcgggca aggcgtaatc ggacacatcg
     5401 ggcagcgcaa caacctcgga cactacctca tgtggggcat actcgccgcc gcctacctca
     5461 acggacaacg aaaaatcccc gccgccctcg gcgcaatctg cctgattatg cagaccgccg
     5521 ttttaggttt ggtcaattcg cgcaccatct tgacctacat agccgccatc gccctcatcc
     5581 ttcccttctg gtatttccgt tcggacaaat ccaacaggcg gacgatgctc ggcatagccg
     5641 cagccgtatt ccttaccgcg ctgttccaat tttccatgaa caccattctg gaaaccttta
     5701 ctggcatccg ctacgaaact gccgtcgaac gcgtcgccaa cggcggtttc acagacttgc
     5761 cgcgccaaat cgaatggaat aaagcccttg ccgccttcca gtccgccccg atattcgggc
     5821 acggctggaa cagttttgcc caacaaacct tcctcatcaa tgccgaacag cacaacatac
     5881 acgacaacct cctcagcaac ttgttcaccc attcccacaa catcgtcctc caactccttg
     5941 cagagatggg aatcagcggc acgcttctgg ttgccgcaac cctgctgacg ggcattgccg
     6001 ggctgctgaa acgccccctg acccctgcat cgcttttcct gatctgcacg cttgccgtca
     6061 gtatgtgcca cagtatgctc gaatatcctt tgtggtatgt ctatttcctc atccctttcg
     6121 gactgatgct cttcctgtcc cccgcagagg cttcagacgg catcgccttc aaaaaagccg
     6181 ccaatctcgg catactgacc gcctccgccg ccatattcgc aggattgttg cacttggact
     6241 ggacatacac ccggctggtt aacgcctttt cccccgccac tgacgacagt gccaaaaccc
     6301 tcaaccggaa aatcaacgag ttgcgctata tttccgcaaa cagtccgatg ctgtcctttt
     6361 atgccgactt ctccctcgta aacttcgccc tgccggaata ccccgaaacc cagacttggg
     6421 cggaagaagc aaccctcaaa tcactaaaat accgccccca ctccgccacc taccgcatcg
     6481 ccctctacct gatgcggcaa ggcaaagttg cagaagcaaa acaatggatg cgggcgacac
     6541 agtcctatta cccctacctg atgccccgat acgccgacga aatccgcaaa ctgcccgtat
     6601 gggcgccgct gctacccgaa ctgctcaaag actgcaaagc cttcgccgcc gcgcccggtc
     6661 atccggaagc aaaaccctgc aaatgacccg cgccggcgga tgcggatacc gcccgaaatg
     6721 taaagctcca tgcaagacat tgcaaaaaac agcaaaccgg tagggaaata cgctatcaaa
     6781 aaacattgca gccgtgttaa gataaaccgt caaacaatct tttcacgccc cgcccgaaac
     6841 agggtcgggg cataccctta cgaaaaggaa acaccatgag ccgcgtatta ctcgtagatg
     6901 acgatgccct gctaaccgaa ctgctgaccg aatacctgag cgccgaaggt ctgaacgtcc
     6961 gcagcgttcc cgacggggaa gcaggcgtac aggaaatcct gagcgggcag tacgatgtag
     7021 tcgtattgga ttccatgatg cccaaaatga acggcttgga tgtcttgaaa aacgtacgcg
     7081 cccgaagcac cgtccccatc atcatgctga ccgccaaagg cgacgacatc gaccgaatca
     7141 tcggcttgga aatgggcgcg gacgactatg tccccaaacc ctgcacacca cgcgaactct
     7201 tggcacgcat caatgccatc ctgcgccgcg cacaacacag cggcgaacag aacaacgcac
     7261 ccaacagcat ctccgtcagc gatgtcgtcc tgtatcccgc caaacgccag gcatccgtca
     7321 aagacatgcc gctcgaactg accagcaccg aattcaacct gctcgaagtc ctgatgcgcc
     7381 atgccggaca ggtagtcagc aaagaaaccc tgtccgtcga agcactcgac cgcaagctgg
     7441 caaaattcga ccgcagtatc gacgtacaca tctccagcat ccgccacaag ttgggcgatg
     7501 cctctctgat tcaaaccgta cgcggcttgg gctacctgtt tgtcaaaaac tgaaataaac
     7561 agataaatga aactgttcca acgcatcttc gccacatttt gcgcggttat cgtctgtgca
     7621 atctttgtgg cgagtttttc tttctggctg gtgcagaaca cccttgccga aaaccagttc
     7681 aaccaacgcc gcaccatcga aaccactttg atgggcagca tcatttccgc attccgggca
     7741 cgcggggacg cgggtgcgcg cgaaatcctg acggaatgga aagacagccc cgtctcatcg
     7801 ggcgtgtacg ttatacaggg cgacgagaaa aaagatatcc tgaaccggta tatcgacagc
     7861 tataccatcg aacgcgcccg gcttttcgcc gccggacacc cgcattccaa cctcgtccat
     7921 atcgaatacg accgcttcgg cgaagaatac ctgttcttca ccaaagactg ggacaaactc
     7981 caagcccgcc gcctgcccag ccccctgttg atccccggcc tgccgctcgc cccgatttgg
     8041 cacgaactca tcatattgtc cttcatcatc gtcgtcggac tgctgatggc gtacatcctc
     8101 gccggcaaca ttgccaaacc catcagaatc ttaggcaacg gcatggacag ggtggcaaac
     8161 ggagaacttg aaacccgcat ctcccaacag gtcgacgacc gcgacgacga attgtcccat
     8221 cttgccatcc aattcgacaa aatggcggaa aaactcgaaa aactcgttgc caaagaacgc
     8281 cacctgctcc accacgtttc ccacgaaatg cgctccccgc ttgcccgtat gcaggcaatt
     8341 gtcggactga ttcaggcgca gccccaaaaa caggagcaat atctcaaacg gctggaaggc
     8401 gaactgaccc gcatggatac gctggccggg gaactgttaa ccctgtcccg tctcgaaact
     8461 tccaatatgg ctttggaaaa agaaagcctg aaactcctgc ccttcctggg caacctggta
     8521 gaagacaatc aaagcattgc ccagaaaaac ggacaaacgg ttaccctgtc tgccgacgga
     8581 aaaatccccg aaaacacaac catccttgcc aacgaaagct acctgtaccg cgccttcgac
     8641 aacgtcatcc gcaacgccgt caactacagt cccgaaggca gcaccatcct gatcaacatc
     8701 ggacaagacc acaaacactg gataatcgac gttaccgaca acggccccgg cgtggacgaa
     8761 atgcagctcc cgcacatctt caccgctttc taccgtgcag actccagtgc caacaaaccc
     8821 ggaacaggac tggggcttgc attgacccaa catattattg aacagcactg cggcaaaatc
     8881 atcgccgaaa acatcaaacc gaacgggctg cggatgcgct tcatcctacc caagaaaaaa
     8941 accggttcca aaacagaaaa aagtgcgaac tgaccataat gccgtctgaa ccggcttcag
     9001 acggcattgc acaaacagtt accccaaaac aaacacacag cgggtgcatc tccaaaaatc
     9061 acgcacatac cgtccgcaaa ggaatatatc atgtcggcac aaaccgatcc cggctacttc
     9121 ttcatgccca accacattat cctgataggc gcgagcgaac gtccgtacag cctgggcgaa
     9181 cgcgtactca gcaacctgct gagtacgccc tttcaaggaa aaatcacccc cgtaaacccg
     9241 cgccaccaca ccatagccgg gcttcccgcc tacaccagcc tcaacaaaat ccccggcaat
     9301 gcagacctga ttattgccgt taccctaccc gacagttacg acaccctctt caaaacctgc
     9361 cgcaaaaagc agctccgaca catcatcctc atacaggact gggacagcct gtctgccgca
     9421 gaactgcaca ccgccgaaac tgccatccgc aaacaccacg gcaacggact caacatcacc
     9481 gcctgcacca ccgcaggcat ccaactgccc tcactcggac ttaacatcag tacccaagac
     9541 ggatacgccg caggccatac cgccatactg accggcaatg ccgccgtcag ccgccaaatc
     9601 gacaacatcc tgaacaaact ccgtcaaggc acatcccgcc acatcagcct gcatcccggc
     9661 atcagcccca tcacatccgc cgattggctc aaccgcttcg gacacagcct gcacaccaaa
     9721 accgccgtcc tacaccacaa ccctgaagag gatcagcgca aactgttcag cgcaatccgc
     9781 caatttaccc gccatacgcc gctgattctc cacatcacct gccgcacgac agaaaccgac
     9841 cgtgccgtac tgcactgcct cgcccgacac tgcaacttcc tcatcagttt caacgccgac
     9901 gacctcgaag ccgcactgcg cgcccaactg tccgaccttc cacccctgtc ccgactcgac
     9961 atcctgtccg acacgcctgc cgaatggctg aacgcgcacg cgccaaaaac cctcgccctc
    10021 cactttccca accttcccca ccacatccgc aacggacacc tgaccggcac acccacaccc
    10081 tcaatctgcc acgacatcgc ctcacgtcag cttgcccgcc ccgacaccca agccgtcctg
    10141 accatcctca gcccctccgg acacgaggat tacaaaaaaa cagcacgcgc ccttatccgc
    10201 ctgtccgaac agaccgccaa acccctgctc gtcagcagcc ccttttcaga cggcataaca
    10261 catttcgaca cccccactca ggcaatccgc accctttcct accgcaacac cgccgccgcc
    10321 ctgaaacagg cacagctcga cattgcaccg ccgcaaccgt gccgtctgaa aacaccgcaa
    10381 ccccaaaaca tcaaaaaagc cctcgaagcc gccgaccccg ccctgctcgc cgaagccctg
    10441 cacctccccc cctaccggca caccacccat aacgccgtac aattccaatt cgacagccat
    10501 cccatttacg gcaatattct gaccgtacgg tacgcagggc aaaccacggc cgcccttccc
    10561 ccgtttacca cacaggacag cctccatatc gcccagtttg ccgaattgga agacccgcaa
    10621 acccttaacc agttccttca catactgacc accctttccg accacaacct gcacatcggc
    10681 aaaatcatcc tcaacctaaa cggcggacaa tacaatactg actttgatct gaaagcaccc
    10741 gaaacacaga atgcacccgg acgcaaaaca acaagcaaga ccgtacaaac cctcgaacac
    10801 gccgccgcaa aaatgcaaag tgccgcccaa tacctgaaac acaaaaaccc gacagccgcc
    10861 gaatttctcc gccacacaag cgaagccgcc gcagaactgc tcggcagcaa aaccgaaacc
    10921 ggagcagccg tacccaacgt gctcccgccc taccctgagg cacacccaaa aacactgtcc
    10981 ctaaaaaacg acacgaccgt taccattacc ccccttttgc ccgaagacgc agaagccaaa
    11041 cagcagttcg tccgcagcct cagccccgaa gcacggtaca cacgcttcat gacccacacc
    11101 aacgaactgc ccgcagccac gttggcacgc ctgtgcaacc ccgattacca ctgtgaagcc
    11161 gcatggacgg caaaggatgc cgacagcaac atcgtcgccg tcgtccgcca cagccgcctg
    11221 aaccgcaacg aatgcgaatt cggcatcaca ctggcggaac atatgcgcgg cagcggactg
    11281 gcacagaaaa tgatggaact catcatccaa accgccgcac agcaaggcta ccggactatg
    11341 agtgccgaca ttctcaaaac caataccccc atgatcaaac ttgctgaaaa atcaggattt
    11401 accctcaagg aatcggacac cgaaaaaaac ctgtaccgcg catatctgaa ccttgcggca
    11461 gacaaaacaa cagaaaaaac aaataaaaac ttgcacaccg accacaaaat aacctaaaat
    11521 cggcagtttc catatatccg attttctcaa aaggactcaa aatggtagtt atccgtttgg
    11581 cacgcggcgg ctcgaaacac cgccccttct acaacgtcat cgttaccgat tcgcgcagcc
    11641 gccgcgacgg ccgcttcatc gaacgcgtag gcttctacaa ccccgtagcc aacgaaaaac
    11701 aagagcgcgt ccgcctcaat gcagaccgcc tgaaccactg gattgcacaa ggcgcgcaag
    11761 tcagcgactc cgttgcaaaa ctgattaaag aacaaaaagc cgcctaattc acatttgccg
    11821 ccatgacaga cactcaaaac cgggtagcca tgggctacat caaaggcgta ttcggcataa
    11881 aaggctggtt gaaaattgcc gccaacaccg aatattccga cagccttttg gactaccccg
    11941 agtggcattt ggtcaaggac ggcaaaacca tcagcgttac ccttgaagcc ggaaaagtcg
    12001 tcaacggcga actccaagtc aaattcgaag gcataaacga ccgcgacttg gcattctcat
    12061 tgcgcggtta caccatcgaa ataccccgtg aagcattcgc cccgacagaa gaagacgaat
    12121 actactggac agacttggtc ggcatgaccg tcgtcaacaa agaccatacc gttttaggca
    12181 aggtaagcaa cctgatggaa accggcgcaa acgacgtatt gatgattgac ggagaacacg
    12241 ggcagattct gattccgttc gtttcccaat atatcgaaac cgtcgatacc ggcagcaaga
    12301 ccattactgc cgactggggt ttggactact gatgcttatc caggcagtta ccattttccc
    12361 cgaaatgttc gacagcatta cccgctacgg cgtaacggga cgcgcgaaca gacagggaat
    12421 ctggcagttt gaagcagtca atccccgaaa gtttgccgac aacagattgg gctacatcga
    12481 cgaccgcccg ttcggcggcg gcccgggaat gattatgatg gctccgccgc ttcatgcggc
    12541 aatagaacac gccaaaacac aatcctccca agctgcaaaa gtcatctacc tcagccccca
    12601 agggaaaccg ctgacacacc aaaaagcggt agaactggca gaacttccgc atctgattct
    12661 gctgtgcgga cggtatgagg gcatagacga aaggcttctg caaagcagcg tcgatgaaga
    12721 aatcagcatc ggagacttcg ttgtttccgg cggagagctt cccgccatga tgctgatgga
    12781 tgcggtattg aggctcgtac ccggcgtatt gggcgatatg cagtctgccg aacaggattc
    12841 gttctcaagc ggcattttgg attgccccca ctacaccaaa cccttagaat ttcaaggcat
    12901 ggctgttccg gaagtattgc gttccggcaa tcatggcttg atagcggaat ggcggttgga
    12961 acaatcgctg cgccgcacct tggagcgcag acccgatctt ttggaaaagc gcgttttaat
    13021 cccaaaggaa tcccgcctct tggaaaccat ccggcaagag caacgggaaa tccaatcata
    13081 atttaggaaa aaaacaatga acctgattca acagctcgag caagaagaaa ttgcccgcct
    13141 gaacaaagaa atccccgaat tcgcaccggg cgacaccgta gtcgtatccg tacgcgtcgt
    13201 ggaaggtacc cgcagccgtc tgcaagccta cgaaggcgtg gttattgccc gtcgcaaccg
    13261 tggtctgaac agcaacttca tcgtccgcaa aatctccagc ggcgaaggtg ttgaacgtac
    13321 tttccaactg tactctccga ccgtcgaaaa aatcgaagtc aaacgccgtg gcgacgtacg
    13381 ccgtgccaaa ctgtactacc tgcgcggcct gaccggtaaa gctgcacgca tcaaagaaaa
    13441 actgcctgca cgcaaaggtt gattcaaacc cgttttcccc aatgccgtct gaaccttctg
    13501 acggcatttc ttattgccgc aacatccgca acggaacagc accaagaagc acaccccttc
    13561 cggcacatcc cgaatccccg tccgaaccga acaaaattta cagaccaaac gttatacagt
    13621 atcatatcag ccatataata ataaccgctt taccgctttc cctttcaaaa ccgcaaatca
    13681 tcatgacacc ttccctttta ctatcaggat tgaccttccg cctcgtcctt gccctgattg
    13741 ccgtatccct tttatggggc gtttactttt gggcagtatc cgcatgagca tcattgtcga
    13801 aaacctgacc gtcagctacc gccgccgtcc tgccgtacac cacgttgaca ttacttttga
    13861 agaacatagt atgtgggcgg ttttcggtcc caacggcgca gggaaatcca cctttctcaa
    13921 atccttaatg ggattgcagc ctatcgatac gggcagcatc cggctggacg gattgacccg
    13981 tcagaacatt gcctaccttc cccagcagtc cgacatcgac cgctcgcagc ctatgaccgt
    14041 tttcgacttg gcggcaatgg ggctatggta tgaaatcggt tttttcagag gaataaatgc
    14101 cgttcaaaaa caacgcgttc acgaatcttt ggaacgcgtc gggatgcggc agtttgccgg
    14161 ccgccaaatt gcccacctct caaacggaca attccaacgc gtcctgtttg cccgaatgct
    14221 ggttcaaaac gccaaattcc tgcttttgga cgaacctttc aatgccgttg atgcacggac
    14281 aacctatgag cttctcgacg tattgcagaa atgccattgc ggcggacacg ctatcattgc
    14341 cgtactgcac gattacgaac aagtccgtgc ctactttccc agtaccctgc tgctcgcccg
    14401 agaaaaaatt gcggcaggcg caaccgagac cattctgaca gaaccctacc tcgcccaagc
    14461 caacgccaaa atgcagcaac aggaaagccc cgactggtgc gcctcataaa tactgcccga
    14521 aaccacgccc cacaccagac accatgaatc tctacgacct gctccttgcc ccctttgcag
    14581 aattcgactt tatgcgctac gccctcgcat ccgtcttctg cctgtccctc agtgccgcac
    14641 ccgtcggcgt attcctcgtc atgcgccgta tgagcctgat aggcgacgca ttgagccacg
    14701 ccgtcctgcc cggtgccgcc gtcggctaca tgtttgccgg cttgagcctg cccgccatgg
    14761 gtttgggcgg cgtagccgca ggcatgctga tggcactgct tgccggactc gtcagccgct
    14821 tcaccaccct gaaagaagat gccaactttg ctgcctttta tctcagcagc ctcgccatcg
    14881 gcgtagtcct cgtcagcaaa aacgggagca gcgtcgattt gctccacctc cttttcggct
    14941 ctgtacttgc cgtcgatatt cctgccctgc agctcatcgc cgccgtctcc agcctcacgc
    15001 tcattaccct tgccgtcatc taccgcccgc tcgtactcga aagcatcgac cccctgtttc
    15061 tcaaatccgt cggcggcaaa ggcgggcttt ggcacgtcct ctttctcgtc ctggtcgtca
    15121 tgaacctcgt atccggcttt caagccctcg gcacactcat gtccgtcgga ctcatgatgc
    15181 tgccagccat taccgcccgc ctgtgggcga agcacatggg cgcactcatc ctcctatccg
    15241 ttctgacagc cctgctgtgc ggcttgagcg gactgctcat ttcctaccac atcgaaattc
    15301 cctccggtcc cgccatcatc ctctgttgca gcgtccttta tctcttttcc gtcatactcg
    15361 gcaaagaagg cggcattctg accaaatggc tcaaaaacca ccgccaccac accacctgac
    15421 cccgcaagcc gcttgaacaa acaggcagct tgttttacca taacagatgt tacgttatat
    15481 cacaggagaa cagttatgaa acacctcaaa ctcaccctta ttgccgcatt gctaaccacc
    15541 gccgcaactg ccgcccccct gcccgtcgta accagcttca gcattttagg cgacgttgcc
    15601 aagcaaatcg gcggagagcg cgtatccata caaagtttgg tcggagccaa ccaagatact
    15661 catgcctatc acatgaccag tagcgacatt aaaaaaatcc gcagtgcaaa actcgtcctg
    15721 ctcaacggct taggacttga agctgccgat gtacaacgtg ccgtcaaaca gagcaaagta
    15781 tcctatgccg aagcgaccaa aggcatccaa cccctcaaag ccgaagaaga aggcggacac
    15841 catcatgacc acgaccatga ccacgaagga caccaccatg accacggcga atttgacccg
    15901 cacgtctgga acgaccccgt ccttatgtcc gcctatgccc aaaacgtcgc cgaagccctg
    15961 ataaaggccg accccgaagg caaagtttat tatcaacaac gcttgggcaa ctaccaaatg
    16021 cagcttaaaa aactgcacag cgacgcacaa gccgcattta acgccgtccc tgccgccaaa
    16081 cgcaaagtcc tgaccgggca cgatgccttt tcctacatgg gcaaacgtta ccatattgaa
    16141 ttcatcgccc cgcaaggtgt gagcagcgaa gccgagcctt cagccaaaca agtcgccgcc
    16201 atcatccgac aaatcaaacg cgaaggcatc aaagccgtct ttaccgaaaa catcaaggac
    16261 acccgtatgg ttgaccgtat cgccaaagaa accggtgtca acgtcagcgg caaactgtat
    16321 tccgacgcac tcggcaacgc gcccgcagac acctacatcg gcatgtaccg ccacaacatc
    16381 aaagccttga tcaacgcgat gaagcaataa aaccgtttga ttggtttgaa tttgaaaagg
    16441 caaaaggccg tctgaaaatt atagtggatt aacaaaaatc aggacaaggc gac
//
LOCUS       DAXHRP010000026        16455 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.026, whole genome shotgun sequence.
ACCESSION   DAXHRP010000026 DAXHRP010000000
VERSION     DAXHRP010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.026"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(217..1035)
                     /gene="cysE"
                     /locus_tag="ACFM72_000656"
     CDS             complement(217..1035)
                     /gene="cysE"
                     /locus_tag="ACFM72_000656"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HFC6257265.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            1219..1797
                     /gene="grpE"
                     /locus_tag="ACFM72_000657"
     CDS             1219..1797
                     /gene="grpE"
                     /locus_tag="ACFM72_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HFC6257266.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            complement(1921..2136)
                     /gene="nqrM"
                     /locus_tag="ACFM72_000658"
     CDS             complement(1921..2136)
                     /gene="nqrM"
                     /locus_tag="ACFM72_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HFC6257267.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(2162..3217)
                     /locus_tag="ACFM72_000659"
     CDS             complement(2162..3217)
                     /locus_tag="ACFM72_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC6257268.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKTYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            complement(3370..4587)
                     /gene="nqrF"
                     /locus_tag="ACFM72_000660"
     CDS             complement(3370..4587)
                     /gene="nqrF"
                     /locus_tag="ACFM72_000660"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HFC6257269.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            complement(4601..5194)
                     /gene="nqrE"
                     /locus_tag="ACFM72_000661"
     CDS             complement(4601..5194)
                     /gene="nqrE"
                     /locus_tag="ACFM72_000661"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HFC6257270.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            complement(5198..5824)
                     /locus_tag="ACFM72_000662"
     CDS             complement(5198..5824)
                     /locus_tag="ACFM72_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HFC6257271.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            complement(5824..6600)
                     /locus_tag="ACFM72_000663"
     CDS             complement(5824..6600)
                     /locus_tag="ACFM72_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HFC6257272.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKTEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            complement(6593..7825)
                     /locus_tag="ACFM72_000664"
     CDS             complement(6593..7825)
                     /locus_tag="ACFM72_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HFC6257273.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            complement(7828..9171)
                     /locus_tag="ACFM72_000665"
     CDS             complement(7828..9171)
                     /locus_tag="ACFM72_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HFC6257274.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPTVIIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNEPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            complement(9521..10942)
                     /locus_tag="ACFM72_000666"
     CDS             complement(9521..10942)
                     /locus_tag="ACFM72_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HFC6257275.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(10957..11307)
                     /locus_tag="ACFM72_000667"
     CDS             complement(10957..11307)
                     /locus_tag="ACFM72_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HFC6257276.1"
                     /translation="MNAVLKGIRANKRGGGKPVSLQIYVKINSFFVFDRLFIKDIYLF
                     VLNKIIYQKEHIFPSTAIRLPAAFRFGKLVYPDYLLYNQSENFFQKQTGSTVRLCPGG
                     TVPVSLPRAAQGSA"
     gene            complement(11304..11663)
                     /locus_tag="ACFM72_000668"
     CDS             complement(11304..11663)
                     /locus_tag="ACFM72_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HFC6257277.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFYRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(11660..12265)
                     /locus_tag="ACFM72_000669"
     CDS             complement(11660..12265)
                     /locus_tag="ACFM72_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HFC6257278.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPDFQFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(12312..12794)
                     /locus_tag="ACFM72_000670"
     CDS             complement(12312..12794)
                     /locus_tag="ACFM72_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HFC6257279.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      12997..13094
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            13305..14405
                     /gene="gcvT"
                     /locus_tag="ACFM72_000671"
     CDS             13305..14405
                     /gene="gcvT"
                     /locus_tag="ACFM72_000671"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HFC6257280.1"
                     /translation="MTALKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVHNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQQA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGQGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            14567..14953
                     /gene="gcvH"
                     /locus_tag="ACFM72_000672"
     CDS             14567..14953
                     /gene="gcvH"
                     /locus_tag="ACFM72_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HFC6257281.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGW
                     FFKLKPANVADYDSLLTAEQYAGEVD"
     gene            15105..16352
                     /gene="hemA"
                     /locus_tag="ACFM72_000673"
     CDS             15105..16352
                     /gene="hemA"
                     /locus_tag="ACFM72_000673"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HFC6257282.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRKSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         3970 a         4043 c         4583 g         3859 t
ORIGIN      
        1 ttccgtacta tccgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
       61 tatatttccg gttgcgtggg aatcgggtgt attgaataaa aggcattttg tccgactggc
      121 aagtgccgac atcggcggca tatcaaggcg caggcttgaa gcgggcaatg tcgtctgaag
      181 cccgtttggc gtttcagacg gcattggtgc ggatattcaa atcataaagt cgatttcggt
      241 aaactggata ttttgatcca tatccgccga cggtgttttg agcgatcgcg ccacgggttt
      301 ggcgggtacg ccgacaaccg tgatggacgg cggcacgtct gaaaccacga cgctgcccgc
      361 cccgattttg gcattgctgc cgatgcggat attgcccaat atcgaggcgt ttgcgccgat
      421 catcacgccg tcgccgattt tagggtggcg gtcgccgcct tctttgcccg aaccgccgag
      481 cgttacgccg tgcaaaatcg aaatattgtt gcccaacacg gcggtttcgc cggcaacaaa
      541 gccggtggcg tggtcgagca tcagcccgta tccgaaacgg gcggcgggat ggatgtccac
      601 gccgaatact tcggacatac ggttttgcag gaaatacgcc agcgttttgc gcccgtcgag
      661 atacagccga tggttgatgc ggtgtgcctg aatcgcgtgg aagcctttga aatataaaag
      721 cggcagcgaa tattcgtcgc aggcgggatc gcgttcgtag atggctttta agtctgcttc
      781 gacgcatttg ccgatttggg tgtcgctgcc caacgcctgc tggtagattt caaacagcgc
      841 acgcacgtcc ataatcgggc tgccgagttt gctggaaagg tggtaggcaa ggacggagcc
      901 gagggactcg tggcgcaaca cggtttggtg caaaaaactt gccagcatcg gttcggcgga
      961 gaccgcggcc gcggtttctt cgcggatggt gtgccagagg tcgaaaccgg ttgtgtttaa
     1021 atggtctttt ttcatgagtg atgacgtttg aaaatcgata tggtcggcag tatcttaccg
     1081 tctatattat tttttcggta ggggatttga aaatgaattt gaaattctct gcttttgctt
     1141 gaagtttctt gaaaatgtcc ttatcttgcg cgggtaataa ctggattttg atttccaatt
     1201 tgttttaagg gatacgatat gagcgaacag acacagcagc aaaacagtga agaagcggtt
     1261 gaaaatgtgg aggcggtgga aaccgtcgag acagtaggaa atgcggacgg tgtgcaggaa
     1321 caggctgccg cagagccggc ttatgaggat ttgcaggcgc ggattgccga gctggaagcg
     1381 cagttgaaag acgagcagct gcgcgctttg gcaaacgagc aaaacctgcg ccgccgccac
     1441 cagcaggaaa ttgcggatac gcacaagttc gccggacaga agtttgccgt ggaaatgctg
     1501 ccggtcaagg attatctgga aatggcgctt ttggatcaga gcggcaattt cgatgcgctg
     1561 aaaatgggcg tgcagatgac tttgaacgag ttgcagaaag catttgatgc tacgcaaatc
     1621 aaggaaatca atcctaaagc gggcgataag ctcgatccga atatccatca ggcgatgcag
     1681 gcggtggcaa gcgaacagga acccaatacc gtggttggtg tgatgaagaa gggctatacc
     1741 ctgtccgacc gtgtgttgcg tcctgcaatg gttacggtgg cacagaagga agcctgaagg
     1801 cgtttgggga ataatctgat ttatttcctg aagcgcgttt tgcgtataaa ccgatcgaag
     1861 taaagcggca atgccgtctg aacccgcctg tcgggcttca gacggcattt tgtttcggtg
     1921 ttaacggtca acccgtatgc cgcctgcctg tttttcttca tccagtttct tttgcagggt
     1981 gtcgcaaggt gtgtcgcagt cgcacatttt tttcataccc aaggcagtaa tgccgccgca
     2041 actgcctttg atgctgcgtt tggagaaaat atagccgacc gccataccga tgatgacggt
     2101 caggaagatg ccgaaggtaa ggagcagggt tttcatggtg tttcctaatc ggtttgtatg
     2161 tttagcggag cagtttttca aattcggaag acatggcggt gcggtagccg cctttatccc
     2221 tgacaatcag gaaaacagcg agtttttcgc gctctgccag ctttaaggct tcggtttcgc
     2281 ccaatacgaa taatcctgtg gacaagccgt ccgccgtcat cgcactgtct gcgaccacgc
     2341 tgatggaggc gaggttgtgg ctgatgggtc gtttgttgtt cgggttgatg atatgggaga
     2401 ggcgtttgcc gtttttatcg acgtggaaaa tacggtaatc gccggaagtg gcaagcgaac
     2461 ggttgttcag cgggacgata atctgcgtat tgccgccttg gacgatattg ggctgctcga
     2521 taccgatgcg ccacggttcg ccgcgcgcgt ttttgccttt gccgtgcaac tcgccgccga
     2581 tttcgaccag ataattttga atgccgtatt tttccagttc gcccgcaact ttatcaacgc
     2641 cgaagccttt ggcaatcgaa gataaatcca aataggtctt ggggtgggtt ttgctcaagg
     2701 aagcgtaatc tttgccttgt ttcaaaatga ttttgtctat gcccgtataa gatgccgcct
     2761 gtttgatttg ttccggcgac ggttcacggg taacggattt gtcggggccg aatccccaaa
     2821 ggttgaccaa ggggccgacg gttacgtcca gcgcgccgtg tgtcaggcgg ttcaggcgga
     2881 cggcttcggc agtaacgtgt gcgaagtcgc ttgaaatgcg gaggggcttg ccggctgtgt
     2941 gttggttgaa ccggctgatt tcggagtcgg gctgataggt ggacatctgc cggttgactt
     3001 ctttaagcgc gtcatcgatg cgtttttgta tttcggcagg tgaggggagt ttgtcccgat
     3061 tatttgaaag gtatttgacg gtataggtcg tgcccatcgt ttcgccttgc agggtaacgg
     3121 tttgcgcggt ttgttccgaa caggcgttca ggaagatgaa acccagggca aatatcaaga
     3181 cgcggataaa gttcggcagg cgtgtttcag acggcatagt gtttgacggt tttggcaaat
     3241 ggtttgaatt atatcgcaaa acggccggta tgtttctatg ccgatgccgt ctgaagggtg
     3301 ttcggatggc atcggcatag aaaaaggaag aaaccgaggt ttcttccttt tgtgtttgaa
     3361 gccgaatatt taaccgccga aatcgtccaa gaggatgttt tcgtcttcca cgcctaagtc
     3421 tttaagcatt ttgatgacgg actggttcat gatcggagga ccacacatat aaaattcgca
     3481 gtcttccggc gcttcgtggt ttttcagatg gttttcgtaa accacgttgt gaatgaagcc
     3541 tgtgtagccg tcccagttgt cttccggcag cgggtcggac agggcgacgt gccacgtgaa
     3601 gttcgggaat tctgctgcga gttggtcgaa gtcttcgaca tagaacatct cgcgtttgga
     3661 acgtgcgccg taccaaaagg taatcttacg tttggagttc aaacgtttca actggtcgaa
     3721 aatgtgggaa cgcatcggag ccatacccgc accgccgccg ataaatacca tttcggcatc
     3781 ggtgtctttg gcgaaaaatt cgccgaacgg gccggaaatc gtaactttgt cgccgggttt
     3841 gagcgaccag atgtaggacg acatttgtcc cggaggcgca tcaggtacgc gcgggggcgg
     3901 cgtggcgata cgcacgttca gcataatgat gcctttttct tcaggatacg aagccataga
     3961 gtaggcgcgc aaaatcggct cgtccacttt ggaaacgtat tgccacaaat tgtatttgtc
     4021 ccagtcttcg tgatattcct taggaatgtc gaagtctttg taggcaacag tgtgaggagg
     4081 agcttcaatt tgaatgtagc cgccggcgcg gaaggggact tcttcgcctt cgggaatggc
     4141 aagcttgagt tctttaatga acgtggcttt gttatcgttg gagatgacgg tgcattccca
     4201 ttttttcacg ccgaacactt cttcggggac ttcgatgtcc atgtcggttt tgacgttgac
     4261 ttggcacgac agacggcagc cttcgcgtgc ttcgcgtttg ctgatgtggg acagctcggt
     4321 cggcaggatg tcgccgccgc cgctttttac gacgacgcgg cattgtccgc acgaaccgcc
     4381 cccgccgcag gcggagggga taaagatgcc ttcgttggca agcgcgccca agagtttgcc
     4441 gccggcgggc atcgtcagct ctttttcgcc gttgactttg atggtgatgt cgccttcgct
     4501 gaccagtttg gatttggcaa acagaatcat cagtgccaaa accaaaacga tgacggtaaa
     4561 catcacgata cctaaaataa tctccatacc gatccctttc ttataactgg atgccagaga
     4621 acgacataaa cgccatcgcc atcaggccgg cggcgataaa ggtaatgccc aagcctttga
     4681 ggcctttggg agcgtccgaa tatttcattt tttcggtaat gcccgccaaa gcgacaatcg
     4741 ccaacatcca gcccaagccc gcgccgaagc cgtatacaac ggactcgccg aagttgtatt
     4801 cgcgttgcgc cataaacgat acggcgccga aaatcgcgca gttcacggta atcagcggca
     4861 ggtagatgcc caatgcgtta tagagggcgg ggacgaattt atccaagaac atttccaaaa
     4921 tctgcaccaa agcggcaatc acgccgatga aggtgatgaa tttcaaaaag gtcaaatcca
     4981 cgccttcgac aatcgcgccg tctttgagca gcgagtaaac gagttggttg acagggacgg
     5041 acagcccgag tacgaaaatt accgccacac ccaaaccgaa tgcggtggat acttttttgg
     5101 ataccgccaa aaacgtgcac atacccaaaa agaaggatag tgccatattt tcaatgaaga
     5161 cggatttgat gaagaggctc aaatagtgtt ccatagctta ttcctccgcc tgttcgggtt
     5221 tccaggtacg cagtccccaa atcaaaaagc cgatgatgaa gaacgcgctg ggggcgagca
     5281 ggaacaagcc gttggtctga taccagccgc cgtcctgcac ggtttggaaa acggtgtagc
     5341 ccaagagttt gcccgagcca atcagttcgc ggacggtggc gacgacaagc agcattatcc
     5401 cgtagcccgc gccgttgccg atgccgtcga tcaggctttc cagcggcggc tctttcatcg
     5461 caaatgcttc ggcgcggccc atcacgatac agttggtaat aatcagaccg acgaatacgg
     5521 aaagctgttt ggacaattcg taggcaaatg cctgcaagag ttggtcgacc agcgtaacca
     5581 gcgacgcgat aatcgccatt tgcacgataa tacggatgct gttggggatg tagttgcgta
     5641 ccagcgaaat gaagaagctg gaaaaaccgg ttaccaaagc tacggaaata cccatcacga
     5701 tggccgtctg aagtttggtg gtaaccgcca aagccgaaca aatacccaaa acctgcaagg
     5761 caatcgggtt gttgtcgata aagggtgaaa acatcaaatg tttcaagcgt ttcatatcag
     5821 ccattattgc gctcctgctg atttcaattt gttcaggtag gggatatagc cgttttcgcc
     5881 gaaccagtag gcgaacgaac cttgcacgcc tttggatgtc agcgatgcgc cggagagggc
     5941 atctacgccg tgttctttgt ccgaacccgc gcctttgccg acgtgcaggg cgagtttgcc
     6001 ttgtccgtca aacagttttt tgccgacgaa tttttgctgc cacaacggat tgccgatttc
     6061 gccgcccaag cccggggttt cgccttgttc gtagtaggta atgccgttga tggtgttgcc
     6121 gtcgggctgg atggcgacaa agccgtacat gaccgaccac aaaccgttgc cgtgcatagg
     6181 caggatgatt tgcccgattt tgccgtcttc gccttttacc aaataaacct cggtgtattt
     6241 ggcacggctt ttgatgcctg ccaaatcgtc ttcggttttg atgcggatgc tttgggcagg
     6301 gtctttgcct gcgatgcgcg cgctgaagtc tttaggcgca tcggcgacgt attcgccggt
     6361 cgccaaatcg acaacacgtt gctcgatacg ctcggcaaag gttttaccga tgtcggtgtc
     6421 cttatccatc aaaccggcta cgctcaagat atagccttgt ttgtcttgga gtttttgttt
     6481 ctcttggatg ggtttcaagc cgacgaccgc accggcaacg atgaccgagc aaatcaggct
     6541 gaccgccaac acgacaatca gcgtgccgct gaagctgtct ttatcgaatt tcttagccat
     6601 tgctgcgcgc ctttctgcgt ttgatgttcg cttgtgcgac gaaatagtcg aaaatcgggg
     6661 caaacaggtt ggcaaacaga atcgccaaca tcatgccttc ggggtaagcc ggattgacca
     6721 cgcggattaa tacgcacatc acaccgatca gtgcgccgta ccaccatttg ccgacattgg
     6781 taaaggaagc ggaaacaggg tcggtcgcca taaacagcat accgatggcg aagccgccga
     6841 ccaccaagtg ccagtaccaa ggcatagcaa acatagcgtt ggtgtccgaa ccgatgaagt
     6901 tgaacagcga agacatcgca atcataccga tcatcacgcc ggcaataatg cgccaagaag
     6961 cgatgcgggc aaacacgata aacgcgccgc cgattaagag tgccaaagtg gagacttcgc
     7021 cgatggagcc gggcagtttg ccgataaacg cgtccatcca agtgatggtt tgaccggtta
     7081 cggcgttttt caggccgtct gcaccgtgtg ccgcccattg cgccagcgcg gttgcgccgg
     7141 aatagccgtc aaccgccgtc caaaccgcat cgccgctcaa gttggcgggg taggcgaaga
     7201 acaagaaggc acggcctgcc agcgcagggt tcatgaagtt tttacctgta ccgccgaata
     7261 cttctttcgc aaccacaacg ccgaaagaaa tacccaaagc tgcctgccac agcggcagcg
     7321 tgggcggaac gattaaggca aacagaatcg aggtaacaaa gaaaccttcg ttgatttcat
     7381 gtttgcgcac ggtggcgaac aaaacttccc agaaaccgcc gacaataaat acggtcgcgt
     7441 aaatcggcag gaagtaaatc gcgccgaaca gcattttgcc caacacgccc gcttcagacg
     7501 acatattgat gcccaaagcg ttggcaaggg cgtaatgcca gtcgttggcg atgctttgtt
     7561 gcagcaaatc gggcgttaag gcaccgaatg cctgtgcgcc gacgttgtac ataccgtaga
     7621 acatggcagg gaacaaagcc agccacacca aaatcatcat gcgtttggag tcgagcgcat
     7681 cgcggacgtg tgccgctttg cgcgttaccg caccggatgt atagaaaatc gtcgccgcag
     7741 cttcgtagag ggcataccat ttttcatgtt tgccgcccgg caggaagtgc ggttcgattt
     7801 tttccagaaa atgtttcaag cccataatca gccttccttc tcaatggttt ccagcacctt
     7861 acgcaacagc gggccgtatt cgtatttgcc cgggcagacg aagctgcaca aagcgaggtc
     7921 ttcttcgtcc aattccaagc aacccaatgc ctgcgcgctg tcggtatcgc cgacgattaa
     7981 atcgcgcaaa agcagggtag gcaggatgtc tagcggcatt acgcgctcgt aagtaccaat
     8041 cggcaccatg gcgcggtcgc caccgttgac ggctgtcgtg aacttgaaga gtttgttttt
     8101 caggaaatgg ccgagggtcg tacgcgtgat ggagtatttg tccggctgcg gcgcaaccca
     8161 gccgaacagc tctttgctgc ggccttcttc gataacggaa atctgattgt ggtagcgtcc
     8221 caaataatcg tgcgcgcctt gtgtaatcgc gccgttcaat accgaaccgg aaatcacgcg
     8281 gttgtctgcg tcaaccaatt cgcccgcagt aatttgcgat actttcgcac ccaaaacggt
     8341 acgcaagagg cgtggttcgt tgacttgaga accacccaaa gcaatcacgc gctcggtgtt
     8401 cagacggcct gttgcaaaca aacggccaat ggcaattaca tcttgataat tgatggtcca
     8461 aacggttttg ttcgcaccga caggctcaat gaaatgaatg tgcgtgccac tcaaaccggc
     8521 aggatgcggg ccgccaaatt catgagtttc gatgttggcg gcgttttcag acggcacgtc
     8581 tgcgccggct gccttacaaa catggatttt gcgttcggtc aaacggctca acaccaacag
     8641 gccgcgtctg aaatcctcgg cggcttcttt gataatgacc gtagggtcgg cagccagcgg
     8701 attggtgtcc atcgcattga cgaagatggc gaacggctcg gcatcgacgg cagggatttt
     8761 gctgaacgga cgggtacgca gcgcagtcca caaaccggat tggatcagat tgcggcgcac
     8821 ttcttcgccg cttaagtttg ccaacgcttc gggcgcgtag cgttcgaact cgatttcgtc
     8881 gttgccttca acggcaatca cgaccgactg aagtacgcgc ttttcgccgc gatggatggc
     8941 ggcgattttg cctgaaaccg gcgcggtaaa caccacgccc ggattctttt tgtcttcaaa
     9001 cagcacttgg ccttttttga cggcatcgcc ttccttgact ttcatcgagg ggcgcatacc
     9061 ggcatattct tcgccaagca acgcgacttc ggtaatgacg ggcccgtcat aaatgacttg
     9121 ctccggtctg cccgcgatgg gcaggtttag accttttttg attttaatca tatatttgca
     9181 ttacttgtga tggttaaggt aaaaacggcg tgttttgata ccgtgtcgcg tggcatcaaa
     9241 agcattgaat aaattaatgt agcaaagtgt tagattctat caggaattgt acctgtttgt
     9301 cagatttgct gcttttttcc ttgcggaagc cgtttttata gtggattaaa tttaaaccag
     9361 tacggcgttg cctcgccctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc
     9421 ctgatttttg ttaatccact ataaattgtc ggaagggggg atattgattt gattatgccg
     9481 gaatttaaaa tgccgtctga atgttcagac ggcatagcgt ttacagcagt ttgaaaacga
     9541 aaaagataag ggtatgtacg atgaagacgg gtgtcaggaa ggcgaccgac cacatcatat
     9601 agccgaagaa agtcggcatc ggtacgccgc gctgttcggc aatggccttg accatgaagt
     9661 tcggtgcgtt gccgatgtag gtcagtgcgc ccatgaatac cgaacccata gaaaccgcca
     9721 gcagcgaatg aaacagggta cccgtcatca aggcttgggc atcgccgccc gccatattga
     9781 aaaaaacgag ataagtgggc gcgttatcca agaatgccga caatatgccg ctcatccaaa
     9841 aatacatcac attaatcgga tgacctgccg tatcgtgaac cagcgatacc accccgccca
     9901 gcgcgcctgc ctcgcctgct ttcagaatgc tcaggacggg aaagatggtg atgaagatgc
     9961 cgaggaagag tttgcccact tcggcgatgg gttcaaagtt gaattcgttg cctgcgcgga
    10021 cttgtttggg cgtgattgcc atagatacgg cggtcaatgc aatcaggatg acatcgcgga
    10081 cgaggttttg cagggcgtaa cggctgccga ggatttcaaa tcccgggtgt tcgggtttcc
    10141 aaaggccgga cattagaacc gcgccgacca cgcccgaaag caggaggaag ttccatttgc
    10201 cgaagatggc gattttttcg ggtttttcct gttgtgccgg cgtatcttgt gcaatgcttt
    10261 cctgtttgaa gaaacggttg tcgatgaaat agaaggcggt caacaggaca gcggtgctga
    10321 tcaggacggg ggcgaacata tgtttgaccg tccacatgaa atctacgcct ttgaggaagc
    10381 cgaggaagag tggggggtcg cccaaagggg tcagaccgcc gccgatgttt gcaaccagga
    10441 aaatgaagaa gatgacgatg tgcacgcggc gggtacggtt ttggttggct ttcagcagcg
    10501 gacgaatcat cagcattgct gcgccggtcg ttcccatgat agaggcaagt gccgtaccga
    10561 cggcaagcag ggcggtgttg agcttgggtg tgccgttcaa gtcgccccaa accaaaatgc
    10621 cgcctgaaat ggtgtacagg gcaagcagca gcaggatgaa agggatgtat tcttcaacga
    10681 gtgcgtgtgc gacggtatgg ataccggcgg acgcgccaaa aaccaaactg aacgggatga
    10741 ggaagagcaa tgtccaaaag gcggtaattt tgccgtaatg gtgatgccag gtatgcgaaa
    10801 aaaacaaggg acccaatgcg atagacagca aaatcagggc aaagggcagg ccccacagca
    10861 ggtttaggtt tgcgccgtcc aaatctgcgg cgtaaaccga tgctgggaaa agcattagtg
    10921 aaaacagggg taggtggcgc atcgtgtttc ctcgattcaa gcactgcctt gcgcggcgcg
    10981 tgggagtgat acaggcaccg tgccgcccgg acataggcgg actgtgctgc ctgtttgttt
    11041 ttgaaaaaag ttttccgatt gattgtaaag taaataatca ggataaacca gtttcccaaa
    11101 ccggaaggcg gcgggaaggc ggattgctgt gcttgggaat atatgttctt tttgataaat
    11161 aattttattt aaaacaaata aatatatgtc tttaataaat aatctatcga aaacgaaaaa
    11221 tgaatttatt ttaacatata tttgcaatga aacaggtttg cccccccccc gtttgtttgc
    11281 ccttatccct ttcagtacgg cattcaagat tcgggcctgc gccacatcca tatggcgaca
    11341 agggaacaaa aaaccgatga aaccgccccg acccaccagc gttggggaaa ctgccaaaac
    11401 attatcaggc aggatgcggt catcatactg atggcgaata ttttggcttt gcgcggcact
    11461 gcgccgtttt gttcccagtt atgaaccatc gggccgaaat agcggtgccg gtgcagccag
    11521 cggtaaaagc gcggggatgc ctttgcccag caggcggcgg agagcagtac gaacggcgtg
    11581 gtcggcaaca gcggcaaaaa aatgccgatg atacccaaca gtagggaaat gcagccgcag
    11641 gcaattaaaa gataacgtat cattttgaaa tatttttctt attgtgcgga taagggcagg
    11701 atgtgatacc gagttttgcc cagccttcat gtcccatttt ttccagcagg gcgatattgc
    11761 gttcgaatat tgccgaagcg tcgggaaagg cttgtgcggc tttggcaatg ctgtcttcgc
    11821 ggatgaggtg cagcgtcgga tagggagaac ggttggtgta gttgccaatg tcgtctgaat
    11881 ccgtgccttc aaattggaaa tcgggatgaa acggggcgat ttggacgatg ccttctaagc
    11941 cgttttcgac aacggcggca tcggcaatgt cgagcatatc gttgaatacg tcgaaatcgg
    12001 ggaatagggt cgggtgaacc agcagggtgg tttccagttc ggtggcgggt gtattgccca
    12061 gtcgctgcag ttcttcgtcc aagtcttcca aaaaaccgtc aaggtgtttg gcttcgctga
    12121 tcgcgatgcg gacaaggttt ttaacgtggg gggctttggc aaagggacac aggttcagac
    12181 cgatgacggc tttttccaac cattgtccgg tgtgttcggc aacagcatct ttattttcgg
    12241 aagtattgat attcattatt gtcatgtaaa tgtgtttgca gattgcacgt gcgggaaaat
    12301 cgggaagggc actattcctt cagcaggtgg ttgagcggca gggaggtggt gtgtttgatt
    12361 tcttttaaaa caaagctcga ttgcgcatct tgtacgccgt ggtgggacag gagcgtatcc
    12421 aaaacaaaat gggaaaacgc gttcatatcg gtaaaaaacg cctgaagcag gtagtcggtt
    12481 tcccctgtca gggcgaagca gctcaagact tcaggccatt ttcgaaccga tgcggcaaag
    12541 tcttcccgcg cgtcttttgc tttgcggatg gaaacgcgga taaatgcctg aagtcccaag
    12601 ttgacagatt ccggagacag cagcgcggca tattggcgga cgataccggc atcttccaac
    12661 tgcttcagac ggcgcaggca cggagaaggc gaaagtgcga cacgttcgga cagttcgaca
    12721 ttggtcagcc tgccgttttc ctggagaacc tgtaagattt taatatcggt tttgtctaaa
    12781 gtgagttggg gcatatttgc gttccgtttt aaggaattcg gattgtctgt ccgtatgttt
    12841 gcggcaatcc gcacagatgg agaccatatt aacatataaa aagttatacc gtcatccggg
    12901 acaaattttg ttttcggaaa atcatgtgaa aacagaggcg gtcggtttgc atctctttaa
    12961 gacggcttgc ccaaaccgcc gattcaagac ataatcggga aatgtgcagg agagtgttac
    13021 acccaactac aatgtaacca ccgaaggcgc agacaccctt aaatcgctca ggtatcaggg
    13081 actgcacatt gaaacaaaca atctggagag cggcgttgga ataacgtcca ccgaagggga
    13141 gaaggccgtc tgaaccacca ttcagacaac cgcgcaaagc agtgagcaga ctggtttgcc
    13201 atcatgcgga tacagccgaa aatctcaggt tcaaggacag atagggtcat ccgcgcacag
    13261 gtgcgcgggc ggcatctgaa caaaaaatcc ggagaaactt gagaatgact gctctgaaaa
    13321 ccaccccatt tcatcaagcc catcaagatg caggcgcgaa gctggtcgat tttgccggct
    13381 gggagctgcc catccattat ggttcacaaa tcgccgaaca cgaagccgtg cgcaccgacg
    13441 ccggtatgtt tgacgtatcc catatgctcg ttaccgacgt agcaggcgca aatgccaaag
    13501 cctttttccg caaattgatt gccaacgatg tcgccaagct cgcttttgtc ggcaaagccc
    13561 tttattccgc tttgctcaac gacaacggcg gtgtgattga cgacttaatc gtttaccgca
    13621 ccaatgaagc cgaaacccaa taccgcatcg tgtccaacgg cgcgacccgc gaaaaagaca
    13681 cggcgcaatt ccacaaagtc ggacaagagt tcggcgtcgc cttcaatccg cgctacgacc
    13741 tcggcatgct cgccgtacaa ggccctaaag ccattgaaaa actcctgacc gtcaaacccg
    13801 aatgggcaga tgtcgtccat aacctcaaac cgttccaagg cgcggatttg ggcaacgact
    13861 ggtttgtcgc ccgcaccggc tacaccggcg aagacggcgt cgaagtcatc ctgcccggca
    13921 ccgaagccgt cgcattcttc aaagccctgc aacaagccgg cgtacagccc tgcggcctcg
    13981 gcgcgcgcga caccctgcgc atggaagccg gcatgaacct ctacggcaac gatatggacg
    14041 acgacaccag cccgctcgaa gcaggtatgg gttggaccgt tgacttgaaa gacgaaagcc
    14101 gcgacttcgt cggcaaagcc gccttgctgg cattgaaaga aaaaggcgtt gccgtcaaac
    14161 aggtcggcct gttgctcgaa aaaggcggca tcctgcgcgc gcatatggaa gtgttgaccg
    14221 acaaaggcca aggcgaaacc accagcggcg tattctcccc aagcctgaaa caatccatcg
    14281 ccatcgcgcg cgtaccgaaa gattttgacg gcgataccgc caaagtgctg atgcgtggca
    14341 aagaagtgga cgtgcgtgta ctgaagctgc cgtttgtccg caacggacag aaacagtttg
    14401 attgatgcgg tttcagacgg cattttcatt tcatatgccg tctgaaagca ggttttaatt
    14461 gttgtccgat acggacgttt gtagaaagca ttgaacaagg catctgtgga tattgattca
    14521 tgcagatgcc gtctgaaaat aacccctatc aatggagtat caaaccatga gcaacaacat
    14581 cccggccgaa ctgaaatacg ttgccagcca tgaatggctg cgccttgaag aagacggtac
    14641 gattaccgtc ggcattaccc accacgcgca agagctgttg ggcgacatcg tgttcgtcga
    14701 gctgcccgaa gtcggcgcga accttgccgc tgaagagcaa gccggtgtgg ttgagtctgt
    14761 aaaagccgcg tccgacgtgt acgcaccgat tgcaggcgaa gtcgttgccg tcaacgaaga
    14821 tttgccaagc gctccggaaa ctgccaacag cgatccttac ggtgcaggct ggttcttcaa
    14881 actcaaaccg gcaaacgttg ccgattacga cagtctgctg actgccgaac aatacgcggg
    14941 cgaagtggat taaaccgccc ggctgcccga cggcaaccgc cggacaaacg gaaactgcac
    15001 cttcagacgg catttttgcg gtcggaggtg cagttttttg tccgtgtttt aaggaagcag
    15061 ttaggctata ataacggtct atattcatct ttaccgattt tttcatgcaa cttaccgctg
    15121 tcggactcaa tcatcaaacc gcacctttaa gcatacggga aaagctggcg tttgccgccg
    15181 ccgccctgcc taaagccgtc cgcaatcttg cccgaagcaa tgcggcaacg gaggcggtaa
    15241 tcctttctac ctgcaaccgc accgagcttt actgcgtcgg tgattcggaa gaaatcatcc
    15301 gatggcttgc cgattaccac agtttgccga ttgaagaaat ccgtccgtat ctgtacgcgc
    15361 tggatatgca ggagactgtg cgccatgctt tccgcgtcgc ctgcgggctg gattcgatgg
    15421 tgttgggcga gccgcagatt ttaggacaga ttaaggatgc cgttagggtt gctcaagagc
    15481 aggaaagtat gggtaagaaa ctcaatgccc tgttccaaaa aaccttttcc gttgctaaag
    15541 aggtccgtac cgatactgcc gtcggcgaaa actcggtttc catggcttcc gcttccgtca
    15601 aattggcgga acagattttt cccgacatcg gcgatttgaa tgtcttgttt atcggcgcag
    15661 gcgaaatgat tgagctggtt gccacttatt ttgccgccaa aagtccccgg ctgatgacgg
    15721 ttgccaaccg gacgctggcg cgtgcacagg agttgtgcga caagctcggt gtcaacgccg
    15781 aaccgtgcct gctgtccgat ctgcctgcca ttctgcacga ttacgacgta gtggtttctt
    15841 caacggcaag ccagttgccc attgtcggca aaggcatggt ggagcgtgca ttgaaacaaa
    15901 ggcagagtat gccgttgttt atgcttgact tggccgtgcc gcgagacatt gaggcggaag
    15961 tcggagattt gaacgatgcc tatctttata cggtggacga tatggtcaat atcgtccaaa
    16021 gcggcaagga ggcaaggcag aaggccgccg ccgccgccga aacgctggtg tccgagaagg
    16081 ttgccgaatt tgtccggcag cagcagggca ggaagagcgt ccccttgatt aaagccttgc
    16141 gggacgaggg cgagaaagcg cgcaagcagg tgttggaaaa tgcgatgaaa cagcttgcta
    16201 aaggcgcaac ggcagaagag gttttggaac ggctgtccgt ccaactgacc aacaagctgc
    16261 tgcattcgcc gacccaaact ttgaataagg cgggggaaga agataaggat ttggttcatg
    16321 ccgtcgcgca gatttatcat ttggacaaat aacggtgcgc cgggaaaaat gccgtctgaa
    16381 gaggtttcag acggcatttt tttgtgccgc ctgacaacat cgtaaaatcc cacattatat
    16441 cgatgtaatc acaaa
//
LOCUS       DAXHRP010000027        16284 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.027, whole genome shotgun sequence.
ACCESSION   DAXHRP010000027 DAXHRP010000000
VERSION     DAXHRP010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.027"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            6..81
                     /locus_tag="ACFM72_000674"
     tRNA            6..81
                     /locus_tag="ACFM72_000674"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="ACFM72_000675"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="ACFM72_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HFC6257283.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="ACFM72_000676"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="ACFM72_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HFC6257284.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="ACFM72_000677"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="ACFM72_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HFC6257285.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKTAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="ACFM72_000678"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="ACFM72_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HFC6257286.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="ACFM72_000679"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="ACFM72_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HFC6257287.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="ACFM72_000680"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="ACFM72_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HFC6257288.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3592..7770
                     /gene="rpoB"
                     /locus_tag="ACFM72_000681"
     CDS             3592..7770
                     /gene="rpoB"
                     /locus_tag="ACFM72_000681"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HFC6257289.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAAEKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7927..12102
                     /gene="rpoC"
                     /locus_tag="ACFM72_000682"
     CDS             7927..12102
                     /gene="rpoC"
                     /locus_tag="ACFM72_000682"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HFC6257290.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12394..12651
                     /locus_tag="ACFM72_000683"
     CDS             12394..12651
                     /locus_tag="ACFM72_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257291.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRMGMPINIG"
     gene            12648..12797
                     /locus_tag="ACFM72_000684"
     CDS             12648..12797
                     /locus_tag="ACFM72_000684"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC6257292.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            12976..13347
                     /gene="rpsL"
                     /locus_tag="ACFM72_000685"
     CDS             12976..13347
                     /gene="rpsL"
                     /locus_tag="ACFM72_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HFC6257293.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13465..13935
                     /gene="rpsG"
                     /locus_tag="ACFM72_000686"
     CDS             13465..13935
                     /gene="rpsG"
                     /locus_tag="ACFM72_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HFC6257294.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13954..16059
                     /gene="fusA"
                     /locus_tag="ACFM72_000687"
     CDS             13954..16059
                     /gene="fusA"
                     /locus_tag="ACFM72_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HFC6257295.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEVDKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            16145..>16284
                     /locus_tag="ACFM72_000688"
     CDS             16145..>16284
                     /locus_tag="ACFM72_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC6257296.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILSKKFGGAA
                     KA"
BASE COUNT         4346 a         3611 c         4203 g         4124 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgt attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaagac tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggtt cggtcgttct
     1741 gcctaaaggc accggtaaga taacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt actattttgg gtcctcgagg cttgatgcca aaccctaaag taggtactgt
     1981 tactcctaac gttgctgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgc gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 tcggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgccgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggtgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagccggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aaacatcaag tattgtttac
     3481 atttatttgc atagttttta tcaaatcatt gcaaataaat gtaaacatca gattgatgcg
     3541 tgccgttgct ttcaaacggc ctattattga aaattacttt tcggagtgta tatgagctat
     3601 tcgtttaccg agaaaaaacg tatccgtaag agttttgcaa agcgggaaaa tgttttggaa
     3661 gttcctttct tgctggcaac ccaaattgat tcttatgcga agtttttgca gctggaaaat
     3721 gcttttgaca aacgtaccga tgacggtctg caggcagcat ttaattctat tttcccgatt
     3781 gtgagccata acggttatgc gcgattggag tttgtgcatt acacattggg cgagcctttg
     3841 ttcgatattc ccgaatgtca gttgcgcgga atcacttatg cagccccctt gcgcgcgcgt
     3901 atccgtttgg tgattttgga taaggaagca tctaaaccga cggtaaaaga agttcgtgaa
     3961 aacgaagtgt atatgggcga aattccgttg atgaccccga gcggttcttt tgtgattaac
     4021 ggcacagagc gtgtgattgt ctcccagttg caccgttcgc ccggcgtatt cttcgagcat
     4081 gacaaaggta agacgcactc ttccggcaaa ttgttattct ccgcccgcat cattccctac
     4141 cgtggttcat ggttggattt tgaatttgat ccgaaagatt tgctgtattt ccgtatcgac
     4201 cgccgccgta aaatgccggt aacgattttg ttgaaggctt tgggctacaa caatgagcaa
     4261 atcttggata ttttctacga caaagaaacg ttctatttgt cttcaaacgg tgttcaaacc
     4321 gatttggtcg caggccgtct gaaaggcgaa actgccaagg tcgatatctt ggataaagaa
     4381 ggcaatgtat tggttgccaa aggtaagcgt attactgcga aaaatatccg tgatattacc
     4441 aatgcaggcc tgacccgttt ggatgtagaa ccggaaagcc tgctgggcaa agcattggct
     4501 gccgatctga ttgattcgga aaccggcgag gtattggctt ctgccaatga tgaaattaca
     4561 gaagagttgt tggccaaatt tgatatcaac ggcgtaaaag aaattacgac cctttacatc
     4621 aatgagttgg atcagggtgc ttatatctcc aataccttgc gcacggatga gactgccggc
     4681 cggcaggcgg cgcgtgttgc gatttaccgt atgatgcgtc cgggcgaacc gcccaccgaa
     4741 gaggcagtcg agcaattgtt taaccgcttg ttcttcagtg aagacagcta cgatttgtcc
     4801 cgcgtaggtc gtatgaaatt taatacgcgc acatacgaac aaaaactgtc cgaagcccaa
     4861 caaaactctt ggtacggccg cctgctgaac gaaacgtttg ccggtgctgc cgaaaaaggc
     4921 ggttatgtcc tgagcgtcga agatattgtc gcctcgattg cgactttggt cgagttgcgt
     4981 aacggccatg gtgaagttga cgatatcgat cacttgggca accgccgagt acgttcggta
     5041 ggcgagctga ctgaaaacca attccgcagc ggtttggccc gtgtggaacg tgctgtaaaa
     5101 gaacgtttga atcaggcgga atcagaaaac ttgatgccgc acgatttgat taatgcaaaa
     5161 cctgtttctg ccgctattaa agaattcttc ggctccagcc aattgagtca gtttatggat
     5221 cagaccaacc ccttgtctga agtaacccat aaacgccgcg tatctgcatt gggtccgggc
     5281 ggtttgaccc gcgaacgtgc cggcttcgag gtacgggacg tgcatccgac ccactacggc
     5341 cgcgtatgtc cgattgaaac gcctgaaggt ccgaacatcg gtttgatcaa ctcattgtcc
     5401 gtttatgcgc gcaccaatga ttacggtttc ttggaaacgc cttaccgccg cgttatcgac
     5461 ggcaaagtaa ccgaggaaat cgattacttg tctgccatcg aagaaggccg ctatgtgatt
     5521 gcacaggcga atgccgattt ggattcagat ggcaatctga ttggcgattt ggttacctgt
     5581 cgtgaaaaag gcgaaaccat tatggcaacg cccgaccgcg tccaatatat ggacgtggca
     5641 accggccagg tggtatccgt tgcggcatcc ctgattccgt tcttggaaca tgatgacgcg
     5701 aaccgcgcat tgatgggtgc caacatgcaa cgtcaggcag tgccttgctt gcgtcctgaa
     5761 aaaccgatgg tcggtaccgg tatcgagcgt tccgttgccg ttgactctgc tactgcaatc
     5821 gttgcccgcc gaggcggcgt ggtcgagtat gtcgatgcca accgtgttgt gattcgtgtc
     5881 catgacgacg aagcgactgc cggcgaagtg ggtgtcgata tttacaactt ggttaaattt
     5941 acccgttcca accagtctac caatatcaat cagcgtcctg ccgtcaaagc cggcgatgtt
     6001 ttgcaacgcg gcgatttggt ggccgatggc gcgtccaccg atttgggcga attggctttg
     6061 ggtcaaaata tgaccatcgc cttcatgccg tggaacggtt acaactacga agactcgatt
     6121 ctgatttccg aaaaagtggc tgcggatgat cgttacactt cgattcacat tgaggaattg
     6181 aatgtcgttg cccgcgatac caagctgggt gcggaagaca ttacccgcga tattccgaac
     6241 ttgtccgagc gtatgcaaaa ccgcttggac gaatccggta tcgtttacat cggtgcagaa
     6301 gtagaagccg gcgatgtgtt ggtaggcaaa gtaacgccta aaggcgaaac ccaactgacg
     6361 ccggaagaaa aactgttgcg cgccatcttc ggcgaaaaag cgtctgacgt aaaagatact
     6421 tcactgcgta tgcctaccgg tatgagcggt acggttatcg acgttcaagt cttcactcgt
     6481 gaaggtattc aacgcgacaa acgcgcccaa tccattatcg attccgagtt gaaacgctac
     6541 cgtttggatt tgaacgacca attgcgtatt ttcgacaacg acgcattcga ccgtatcgaa
     6601 cgtatgattg tgggtcaaaa agccaatggt ggtccgatga agctggctaa aggcagcgaa
     6661 attactaccg aatatttggc gggtctgccg agcaggcacg attggttcga tatccgtctg
     6721 accgatgaag atttggccaa gcagttggaa ctgattaaag tgagcctgca acaaaaacgc
     6781 gaagaagcgg acgagttata cgaaatcaag aagaaaaaac tgacccaagg cgacgaattg
     6841 caacccggcg tacaaaaaat ggtgaaagtt tttatcgcca tcaaacgccg tctgcaagcc
     6901 ggcgacaaaa tggcgggccg ccacggtaac aaaggcgtgg tatcgcgcat tctgccagtg
     6961 gaagacatgc cttacatggc ggacggccgt ccggtagaca tcgtactgaa cccattgggc
     7021 gtaccttccc gtatgaacat cggtcagatt ttggaagttc acttgggttg ggcagcaaaa
     7081 ggtatcggcg agcgtatcga ccgtatgctg aaagagcaac gcaaagcagg cgagttgcgc
     7141 gagttcttga acagactcta caacggcagc ggtaagaaag aagatttgga cagcctgaca
     7201 gatgaagaaa tcatcgaatt ggcttccaac ctgcgtaaag gtgcatcttt cgcttctcct
     7261 gtattcgacg gtgcgaaaga gtctgaaatc cgcgaaatgt tgaacttggc ttacccaagc
     7321 gaagatcctg aggttgagaa actgggcttc aacgacagta aaactcaaat cacgctgtat
     7381 gacggccgtt caggcgaagc atttgatcgc aaggttacag tcggtgtgat gcactatctg
     7441 aaactgcacc acttggttga cgaaaaaatg cacgcccgtt ctaccggtcc atacagtctg
     7501 gttacccaac agcctttggg cggtaaagct cagttcggtg gccaacgttt cggtgagatg
     7561 gaggtttggg cattggaagc atacggtgcg gcatacacgc tgcaagagat gctgactgtg
     7621 aagtctgatg acgtgaacgg ccgtaccaaa atgtacgaga acatcgtcaa aggcgaacac
     7681 aaaatcgatg ccggtatgcc cgagtccttc aacgtattgg tcaaagagat tcgctcactg
     7741 ggcttggata tcgatttgga acgttactaa acaaaagttt tcagacggcc tttcagggtc
     7801 gtctgaaaaa gtggtttcag aataagaatg aagcaatcgg catttaggcc gtctgaaatc
     7861 aaaagtaccg tttcccaata tcgaaaatcc gccatgcggt aaaaatactt ccttcaagga
     7921 gcaaaaatga atttgttgaa cttatttaat ccgttgcaaa ctgccggcat ggaagaagag
     7981 tttgatgcca ttaaaatcgg tattgcctct cccgaaacca tccgctcatg gtcttatggc
     8041 gaagtcaaaa aacctgaaac catcaactac cgtacgttca aacctgagcg tgacggtttg
     8101 ttctgtgcca aaatctttgg cccggtcaaa gactacgaat gcttgtgcgg aaaatacaaa
     8161 cgcttgaaat ttaaaggcgt aacgtgtgaa aaatgcggcg tggaagtaac cctgtccaaa
     8221 gtgcgccgcg aacgcatggg tcatatcgaa ttggctgcgc ccgtcgcaca tatttggttc
     8281 ttaaaatccc tgccttcccg cttgggtatg gtgttagaca tgactttgcg cgacatcgag
     8341 cgcgtattgt actttgaagc atttgtggta accgatcccg gtatgactcc gctgcaacgc
     8401 cgccaattgc tgactgaaga cgattactac aacaagctgg acgaatacgg cgacgatttc
     8461 gatgccaaaa tgggtgcgga aggtatccgc gaattgctgc gtaccctgaa tgtagcgggc
     8521 gaaatcgaaa tcctgcgcca agagttggaa tcgaccggtt ccgacaccaa aatcaaaaaa
     8581 atcgccaaac gcttgaaagt attggaagcc ttccatcgtt ccggtatgaa actggaatgg
     8641 atgattatgg atgtgctgcc ggtattgccg cctgatttgc gtccgttggt tccattggat
     8701 ggtggtcgtt ttgccacttc cgatttgaac gatttgtacc gccgcgttat taaccgtaac
     8761 aaccgtctga aacgtctgtt ggaactgcat gcgcctgaca tcatcgtccg caacgaaaaa
     8821 cgtatgttgc aagaagcagt tgactcgctg ttggataacg gccgtcgcgg taaagccatg
     8881 accggcgcca acaaacgccc gctgaaatca ttggcagaca tgattaaagg taaaggcggt
     8941 cgcttccgtc aaaacctgtt gggcaaacgt gtggactact ccggccgttc cgtgattacc
     9001 gtaggcccgt acctgcgtct gcaccaatgc ggtttgccga aaaaaatggc tttggaactg
     9061 ttcaaaccgt tcattttcca caaattggaa aaacaaggtt tggcctctac cgttaaagca
     9121 gcgaaaaaat tggtagagca agaagtaccg gaagtatggg acatcttgga agaagtcatc
     9181 cgcgaacatc cgattatgct gaaccgtgcg ccgaccctgc accgtttggg tattcaagcg
     9241 ttcgaaccta tcttgattga aggtaaagcg attcagttgc acccattggt gtgtgctgcg
     9301 ttcaacgccg actttgacgg cgaccaaatg gcggtacacg ttccattgag cttggaagca
     9361 caaatggaag cacgcacgct gatgctggct tcaaacaacg tattgtctcc ggccaacggc
     9421 gaaccgatta tcgtaccttc ccaagacatc gtattgggcc tgtactatat gactcgcgat
     9481 cgtatcaatg ccaaaggcga aggcagcctg tttgccgatg tgaaagaagt gcatcgcgca
     9541 taccatacca aacaggtcga gctgggtacg aaaatcaccg tacgtctgcg cgaatgggtg
     9601 aaaaacgaag caggtgagtt tgagcctgtc gttaaccgtt acgaaacaac cgtcggccgt
     9661 gcattgttga gcgaaatcct gccgaaaggc ctgccgtttg aatatgtcaa caaagcgttg
     9721 aagaaaaaag aaatttctaa actgattaac gcatcgttcc gcctgtgcgg cttgcgcgat
     9781 acggttatct ttgctgacca cctgatgtac accggtttcg gatttgcggc aaaaggcggt
     9841 atttccattg ccgttgacga tatggaaatt ccaaaagaaa aagcggcctt gctggctgaa
     9901 gccaatgccg aggttaaaga aatcgaagac caataccgtc aaggtttggt taccaacggc
     9961 gaacgctaca acaaggtggt cgatatttgg ggtcgtgccg gcgataagat tgctaaagcg
    10021 atgatggaca acttgtccaa acaaaaagtt atcgaccgtg ccggcaacga agtcgatcaa
    10081 gagtcattca actccattta tatgatggcg gactccggtg cccgtggttc tgcagctcag
    10141 attaaacagt tgtccggtat gcgtggcttg atggcaaaac ctgacggctc gattattgaa
    10201 acgccgatta cctcaaactt ccgtgaaggt ctgaccgtat tgcaatactt tattgcgacc
    10261 cacggtgcgc gtaagggttt ggcggatacc gcattgaaaa ccgcgaactc cggttacctg
    10321 actcgtcgtc tggtagacgt aactcaagat ttggtcgttg ttgaagacga ttgcggtact
    10381 tcagacggct ttgtcatgaa ggcagtggta caaggcggtg atgtgattga agcattgcgc
    10441 gatcgtattt tgggtcgtgt taccgcgtct gacgttgtcg atccgtcaag tggcgaaacc
    10501 ttggttgaag ccggtacgtt gctgactgaa aaactggtgg atatgatcga ccaatccggt
    10561 gtcgatgaag tcaaagtccg tacgccgatt acttgtaaaa cccgtcacgg cctgtgtgca
    10621 cactgttacg gtcgtgactt ggcacgcggc aaactggtta acgccggtga ggcagtcggt
    10681 gtgattgctg cacaatccat tggcgaaccg ggtacccagt tgaccatgcg tacgttccac
    10741 atcggtggtg cggcatcccg tgcggcagca gccagccaag tggaagccaa atccaacggt
    10801 acggcacgat tcagcagcca gatgcgctac gttgccaaca acaaaggcga gttggttgtc
    10861 atcggccgtt cttgtgaagt cgtgattcac gacgatatcg gccgtgaacg cgaacgccac
    10921 aaagtacctt acggtgccat cctgctggta caagacggta tggccattaa agccggtcaa
    10981 accttggcaa cctgggatcc gcatacccgt ccgatgatta ccgaacacgc aggtatggtg
    11041 aaattcgaaa acgtggaaga gggcgttacc gttgccaaac aaaccgatga tgtaaccggt
    11101 ttgtccactt tggtggtgat tgacggtaaa cgtcgttcct ctagtgcttc caaactgctg
    11161 cgtccgactg tgaaactctt ggacgaaaac ggcgtggaaa tctgtattcc cggtacttct
    11221 actccggtat ccatggcatt ccccgttggt gcggtgatta ccgtacgcga aggtcaggaa
    11281 atcggtaaag gcgacgtatt ggcgcgtatt ccgcaagcct cttccaaaac ccgcgacatt
    11341 accggcggcc tgccgcgcgt tgccgagctg tttgaagcac gcgtgccgaa agatgccggt
    11401 atgttggcgg aaattaccgg taccgtttcc ttcggcaaag agaccaaagg gaagcaacgt
    11461 ctgattatca ctgacgtgga cggtgtagca tacgaaaccc tgatttctaa agagaaacag
    11521 attctggtac acgacggtca agtggtaaac cgcggcgaaa ccattgtgga cggcgcggtc
    11581 gatccgcacg atattctgcg tctgcaaggt atcgaagcac tggcacgcta cattgtccaa
    11641 gaggtgcaag aggtttaccg tctgcaaggt gtgaagattt ctgataaaca catcgaagtc
    11701 atcatccgtc aaatgttgcg ccgtgtgaac attgcggatg ccggcgaaac cgggttcatt
    11761 accggagagc aggtcgaacg cggcgatgtg atggcggcca atgaaaaagc tttggaagaa
    11821 ggcaaagaac cggcgcgtta cgaaaacgta ttgctgggta ttaccaaagc ttccctgtcc
    11881 accgacagtt tcatttctgc cgcatcgttc caagaaacga cccgtgttct gaccgaagcc
    11941 gcgattatgg gcaaacaaga cgaactgcgc ggtttaaaag agaacgtcat cgtcggccgc
    12001 ctgattcctg ccggtaccgg tttgacttat caccgcagcc gtcatcagca atggcaaggg
    12061 gtagagcagg agactgctga aacccaagta acggatgaat aatcttcggc gcgtccattc
    12121 aataaaaaac cgcaagcctt gggcttgcgg tttttctttg tccgattaag gcaaaaacaa
    12181 gcgttttcgt cattttgagg cgtgtggatt attccttagg tattttcggg ccggagacca
    12241 acgaggtggc gggtgtcgtc ggtacgtccg gagaccaaaa taactttgcc agggatgttg
    12301 gtttcggcgg tcaaaaaaag tagcgtctta atgttttcca tttaaacaaa tgtcgtctga
    12361 aacttcagac ggcatttcct ttaaaaaata aatatgaaac ccagaaatct cttttttgca
    12421 ggctgcctgc tgacttcggc gacgtttgcc gaggatatcg gcgtacctgt cgaactgatt
    12481 aacgtcggta atcggattgc gatgccgtct gaaggggaaa gcctcgccct cctgccgttt
    12541 gccgaggatg taccgccggt tcgcgatgca atgccgtctg aagttcctaa aagcgcggca
    12601 ggcggcgatg ttcggggtga ccggatggga atgccgatta acatcggatg agcgcggctt
    12661 tatggcataa aaaactgtcg tggaaaggat ttacacccca aataaatttc cgttacaaca
    12721 agatcaacag caatatgccc gccttttatt cgcgcagcgg caaggaacgg tttgtcagta
    12781 tagaaaaaac gtattgacag tattttcttc agtcgtccga ctgattgtga gggatgtcgg
    12841 taaatattta tcggcaaaca agaaaatcat ctttcttctt gtcgttatgc ttgactgtat
    12901 acttgcaata aaaatataat tccactcttg ccgacatggt gtcggcaagt atttaactca
    12961 acaggacgag aaaatatgcc aactatcaac caattggtac gcaaaggccg tcaaaagccc
    13021 gtgtacgtaa acaaagtgcc cgcactggaa gcctgcccgc aaaaacgcgg cgtgtgcacc
    13081 cgtgtataca cgactacccc taaaaaacct aactctgcat tgcgtaaagt atgtaaagtc
    13141 cgcctgacca acggttttga agtcatttca tacatcggcg gcgaaggcca caacctgcaa
    13201 gagcacagtg tcgtattgat tcgcggcggt cgtgtaaaag acttgccagg tgtgcgttac
    13261 cacactgtac gcggttcttt ggatactgca ggcgttaaag accgtaaaca agcccgttcc
    13321 aaatacggtg ctaagcgtcc taaataatta ctgggactta aataggcacg tcggccgcct
    13381 aagctgaaca acggccgagt aagtgaatac tcaattgggt attcatggga atagacccga
    13441 ctgaatagat taaaggaaat taaaatgcca agacgtagag aagtccccaa gcgcgacgta
    13501 ctgccagatc ctaaattcgg cagcgtcgag ttgaccaaat tcatgaacgt attgatgatt
    13561 gacggtaaaa aatccgttgc cgagcgtatc gtttacggtg cgttggaaca gattgagaaa
    13621 aaaaccggca aagtagcaat cgaagtattt aacgaagcca ttgcaaacgc caaacctatc
    13681 gtggaagtga aaagccgccg tgtaggtggt gcaaactacc aagttcctgt tgaagttcgt
    13741 ccttcacgcc gtttggcttt ggcaatgcgc tgggttcgcg atgcggcccg caaacgtggt
    13801 gagaaatcca tggacctgcg tttggcaggc gaattgattg atgcgtccga aggccgtggc
    13861 ggtgcgttga aaaaacgtga agaagtacac cgtatggctg aagccaacaa agcattctct
    13921 cacttccgtt tctaattttg aaaggctaat aaaatggctc gtaagacccc gatcagcctg
    13981 taccgtaaca tcggtatttc cgcccatatc gatgcgggta aaaccacgac gacagaacgt
    14041 attttgttct ataccggttt gacccacaag ctgggcgaag tgcatgacgg tgcggctact
    14101 accgactaca tggaacaaga gcaagagcgc ggtattacca ttacctccgc tgccgttact
    14161 tcctactggt ccggtatggc gaaacaattc cccgagcacc gcttcaacat catcgacacc
    14221 ccgggacacg ttgactttac cgtagaggta gagcgttcta tgcgtgtatt ggacggcgcg
    14281 gtaatggttt actgcgcggt gggcggtgtt caaccccaat ctgaaaccgt atggcggcaa
    14341 gccaacaaat accaagtgcc gcgcttggcg tttgtcaata aaatggaccg tcagggtgcc
    14401 aacttcttcc gtgttgtcga gcaaatgaaa acccgtttgc gcgccaatcc tgtacctatc
    14461 gtcattccgg ttggtgcgga agacaacttc agcggtgtgg ttgatttgtt gaaaatgaaa
    14521 tccatcattt ggaatgaagt cgataaaggt acaaccttta cctatggcga tattcctgcc
    14581 gaattggtcg aaactgccga agaatggcgt caaaatatga ttgaagccgc agccgaagcc
    14641 agcgaagaac tgatggacaa atacttaggc ggcgacgagc tgaccgaaga agaaatcgta
    14701 ggcgcgttgc gtcaacgtac tttggcaggc gaaattcagc ctatgctgtg tggttctgca
    14761 tttaaaaaca aaggtgttca acgtatgttg gacgcagttg tagaattgct gccagctcct
    14821 accgatattc ctccggttca aggtgtcaac ccgaataccg aggaagccga cagccgtcaa
    14881 gccagcgatg aagagaaatt ctctgcattg gcgttcaaaa tgttgaacga caaatacgtc
    14941 ggtcagctga cctttatccg cgtttactca ggcgtagtaa aatccggcga taccgtattg
    15001 aactccgtaa aaggcactcg cgaacgtatc ggtcgtttgg tacaaatgac tgccgcagac
    15061 cgtactgaaa tcgaagaagt acgcgccggc gacatcgcag ccgctattgg tctgaaagac
    15121 gttactaccg gtgaaacctt gtgtgcggaa agcgcgccga ttatcttgga acgtatggaa
    15181 ttccccgagc cggtaatcca tattgccgtt gagccgaaaa ccaaagccga ccaagagaaa
    15241 atgggtatcg ccctgaaccg cttggctaaa gaagaccctt ctttccgtgt ccgtacagac
    15301 gaagaatccg gtcaaaccat tatttccggt atgggtgagc tgcacttgga aattattgtt
    15361 gaccgtatga aacgcgaatt cggtgtggaa gcaaatatcg gtgcgcctca agtggcttac
    15421 cgtgaaacta tccgcaaagc cgttaaagcc gaatacaaac atgcaaaaca atccggtggt
    15481 aaaggtcaat acggtcacgt tgtgattgaa atggaaccta tggaaccggg tggtgaaggt
    15541 tacgagttta tcgatgaaat taaaggtggt gtgattcctc gcgaatttat tccgtctgtc
    15601 gataaaggta tccgcgatac gttgcctaac ggtatcgttg ccggctatcc tgtagttgac
    15661 gtacgtatcc gtctggtatt cggttcttac catgatgtcg actcttccca attggcattt
    15721 gaattggctg cttctcaagc gtttaaagaa ggtatgcgtc aagcatctcc tgccctgctt
    15781 gagccaatca tggcagttga agtggaaacc ccggaagaat acatgggcga cgtaatgggc
    15841 gacttgaacc gccgtcgcgg tgttgtattg ggtatggatg atgacggtat cggcggtaaa
    15901 aaagtccgtg ccgaagtacc tttggcagaa atgttcggtt actcgaccga cctgcgttct
    15961 gcaacccaag gccgcgctac ttactctatg gagttcaaga aatattctga agctcctgcc
    16021 cacatagctg ctgctgtaac tgaagcccgt aaaggctaat cagaaaaggc cgtctgaaac
    16081 tgaaaataaa ttttcagacg gccattgttc tttaatcgat ctttatatgt aaaggaatta
    16141 gctcatggct aaggaaaaat ttgaacgtag caaaccgcac gtaaacgttg gcaccatcgg
    16201 tcacgttgac catggtaaaa ccactctgac tgctgctttg actactattt tgtctaaaaa
    16261 attcggtggc gctgcaaaag ctta
//
LOCUS       DAXHRP010000028        16272 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.028, whole genome shotgun sequence.
ACCESSION   DAXHRP010000028 DAXHRP010000000
VERSION     DAXHRP010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16272
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.028"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(38..763)
                     /gene="aat"
                     /locus_tag="ACFM72_000689"
     CDS             complement(38..763)
                     /gene="aat"
                     /locus_tag="ACFM72_000689"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HFC6257297.1"
                     /translation="MRIPLLAPDNYAFPDPAYALAWCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(833..1267)
                     /gene="fur"
                     /locus_tag="ACFM72_000690"
     CDS             complement(833..1267)
                     /gene="fur"
                     /locus_tag="ACFM72_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HFC6257298.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            1486..1863
                     /locus_tag="ACFM72_000691"
     CDS             1486..1863
                     /locus_tag="ACFM72_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC6257299.1"
                     /translation="MNKTLILALSALLGLAACSVERVSLFPSYKLKIIQGNELEPRAV
                     ASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            1873..2682
                     /gene="dapB"
                     /locus_tag="ACFM72_000692"
     CDS             1873..2682
                     /gene="dapB"
                     /locus_tag="ACFM72_000692"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HFC6257300.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKASSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2946..3356)
                     /locus_tag="ACFM72_000693"
     CDS             complement(2946..3356)
                     /locus_tag="ACFM72_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257301.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFIYGYATKSQDINIDNTLELGELKQDDEILDYGGA
                     LELIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            complement(3358..3603)
                     /locus_tag="ACFM72_000694"
     CDS             complement(3358..3603)
                     /locus_tag="ACFM72_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257302.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNETELARMGLRL
                     KYNGPLKEEFKRLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(3611..4783)
                     /gene="lpxB"
                     /locus_tag="ACFM72_000695"
     CDS             complement(3611..4783)
                     /gene="lpxB"
                     /locus_tag="ACFM72_000695"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HFC6257303.1"
                     /translation="MWGQTNMADKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     VGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAERLKRSGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARKTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAARFLLPAATEATKRRLAEILQRSEFAGLPLTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQHDAVPEKLAAALADWYEHPDKVAALQQDFRVLHLLLKKDTADLAARAVLEEAGC"
     gene            complement(4831..5823)
                     /locus_tag="ACFM72_000696"
     CDS             complement(4831..5823)
                     /locus_tag="ACFM72_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC6257304.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            6317..9076
                     /locus_tag="ACFM72_000697"
     CDS             6317..9076
                     /locus_tag="ACFM72_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HFC6257305.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRSE
                     RGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
     gene            complement(10095..11084)
                     /gene="pdxA"
                     /locus_tag="ACFM72_000698"
     CDS             complement(10095..11084)
                     /gene="pdxA"
                     /locus_tag="ACFM72_000698"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HFC6257306.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAAEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFCIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRRERINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            11244..12671
                     /locus_tag="ACFM72_000699"
     CDS             11244..12671
                     /locus_tag="ACFM72_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC6257307.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            12996..14891
                     /gene="mnmG"
                     /locus_tag="ACFM72_000700"
     CDS             12996..14891
                     /gene="mnmG"
                     /locus_tag="ACFM72_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HFC6257308.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLSHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            14959..15543
                     /gene="rnhB"
                     /locus_tag="ACFM72_000701"
     CDS             14959..15543
                     /gene="rnhB"
                     /locus_tag="ACFM72_000701"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HFC6257309.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            15556..15801
                     /locus_tag="ACFM72_000702"
     CDS             15556..15801
                     /locus_tag="ACFM72_000702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257310.1"
                     /translation="MPSELQTAFPASQLQRERTHTAIPAKNRKSKKKPKIRHSRAGGN
                     PIRPVSVFFEFQVTSKPPFPQKRESRNSKLQEFIKND"
BASE COUNT         4025 a         4978 c         3991 g         3278 t
ORIGIN      
        1 ccaccatatt tgaacctgac cggagcataa gccgccatca aagccccttg cacgccactt
       61 cgcgccgccc gatttcctct ttcaacggca cggcgttcaa catccgcaga cgttcggcaa
      121 aatccgcaaa cggcagcagc tccgaaccga aacggcgcat atgttccgtg tcctgctggc
      181 agtctatcag ttccacaccc aaatccgcca aaaacggcac ggcgcaggca aacgcgattt
      241 tcgacgcatc cggttgtaat gcgaacatcg attcgccgta aaacaccctg ccgatttgca
      301 cgccgtaaaa gccgcccgcc aacctcgttt caccgctttc atcgggataa tggcactcga
      361 aagaatgcgc gtgtcccatt tcgtgcagct tcaaatatgc cgtctgaaac tcgggcgcaa
      421 tccaagttcc gtcctgattc gggcgcgccg ctgccgcaca atgcgcgacc acttccgcaa
      481 aacagccgtt gaccgcaacc cgatagctgc cgttgcgcag cgttttcgcc agcgagcgcg
      541 gaacgtgcag acgttcggga acaatcaccg cacgcgggcc gaccgcatac caaaaaaacc
      601 aaccgtcccg agaaaaccac ggaaacacgc cgttccgata cgcctcgagc agccgccccg
      661 catccaaatc gccgctcacg ccgaccagcc cgtcgcacca ggccaaagca taggcaggat
      721 cgggaaaggc ataattgtca ggggcaagca gcggaatacg catggcagtt ctccaaaaac
      781 acagacggca tccaaaatca tgaatgccgt ctgaacaaca aaccgtccgg atttaacgtt
      841 tgcccttggc ctgacagtcg ctgcacacgc cgtacatata aagcgcgtga tcgacgatgc
      901 ggtagccgtt ttcctcggcg attttgtctt gcagggcttc gatttcagga ttgtggaact
      961 ccgtaacctc gccgcacttc acgcagacga tatggtcgtg gtggtcgccc ttgtccaact
     1021 cataaaccgc cttgcccgtt tcaaaatggt ggcgttgcag aatgcccgcc tgctcaaatt
     1081 gcgtcagcac gcggtaaatc gtcgccacac cgatttccac accctcttcc aacaaaatgc
     1141 ggtacacatc ttccgcactc aaatgctctt ccgcatgcgt ctcgaacaaa tccaaaatct
     1201 tcaaacgcgg gccggtaacc ttcagaccgc tgtctttcag ttgtgcaata ttgttgaatt
     1261 tttccataat attcaatacc cctgtaaaac aatagacgtt ataatacgca atttcggcct
     1321 gtttgcccac tatcgcacca tagcagtttg caatagtaaa accgcaccgg cggccgatgc
     1381 gcggacaggg cggataccgc ttaatcgtat gattatcgtt cgcttttata aaatattcaa
     1441 gcagtgttac actacccatc ccgatttgca cagaaaggca tttccgtgaa caaaaccctc
     1501 atcctcgccc tttccgccct cctcggcctt gccgcgtgca gcgtcgaacg cgtttcactg
     1561 ttcccctcgt acaaactcaa aatcatacag ggcaacgaac tcgaacctcg cgccgtcgcc
     1621 tccctccgcc ccggtatgac caaagaccaa gtcctgctcc tgctcggcag ccccatactg
     1681 cgcgacgcat tccataccga ccgctgggac tataccttca acacctcccg caacggcatc
     1741 atcaaagaac gcagcaatct gaccgtctat tttgaaaacg gcgtactcgt ccgcaccgaa
     1801 ggcgacgtcc tgcaaaacgc tgccgaagcc ctcaaagacc gccaaaacac agacaaacca
     1861 taaggaacac acatgacacc gctcaaaatc gccatcgccg gcgcaaacgg ccgtatggga
     1921 cgcgtattgg ttgaagccgt caacaaccat cccgacaccg tcctttccgg cgcgctcgaa
     1981 cactcgggct cagaagccct cgggctggac gcaggctacg ccgtcggact caaaaccggc
     2041 atcgccattt cagacgacgt tgacgccgtt ctcgcacaaa gcgacgtact catcgacttc
     2101 acccgccccg agcccaccct caaacacctg caaaaatgcg ttgaaaaaca agtcaacatc
     2161 atcatcggca caacaggctt cgacgatgcg ggcaaagccg ctatccacac tgccgccgaa
     2221 caaacaggca tcgttttcgc cgccaacttc agcgtcggcg tcaacctcac cttccacatc
     2281 ctcgacaccg tcgcacgcgt attaaacgaa ggctacgaca tcgaaatcat tgaaggccac
     2341 caccgccaca aagtcgatgc ccccagcggc accgcgttac gcatgggcga agtcatcgcc
     2401 ggcgcgctcg gccgcgacct caaacaatgc gccgtttacg gccgcgaagg ccacaccggt
     2461 ccgcgcgatc cgtcgaccat cggctttgcc accgtccgcg caggcgacat cgtcggcgac
     2521 cacaccgccc tcttcgccac cgacggcgag cgcgtggaaa tcacccacaa ggccagcagc
     2581 cgcatgacct ttgccgccgg tgccgtccgc gccgcagttt gggtcaacgg caaaacgggt
     2641 ttgtacgata tgcaggacgt actcgggctg aacaaccgtt aacccccata caaaatgccg
     2701 tctgaaaaga tattgttcag acggcatttt gccgacaggc tccgtatcgg catatcaatg
     2761 tttcaacaca caggacgaca cataaagcgt cgccctatgt gttgccctga ttcggaaggg
     2821 gttacgcccc tcccaaataa aatctgattc taccgccccg aaggacagat gtccgagtgg
     2881 cggggtttca accgaaaagg aaatacgata aagttgcctg cgcagcataa caagctacgg
     2941 ctcgtttaat tgaaaccctc ctgatctaaa aattctaact ctatttcccg gcaaactata
     3001 tctatcctaa aagcagtcgg aaaatcatac ctaccgccta tcaattccag cgcacctcca
     3061 taatccaaga tttcatcatc ctgctttaat tcgccaagtt ccaatgtatt atcgatattt
     3121 atatcttggc tctttgtagc gtatccatag ataaatttca gatagctgaa ctgcttgaat
     3181 ttaattttta cccagtctgt ataatttggt gtaggaatct cttgaggaaa gtccggataa
     3241 tccacattct ggacgatgat atggaattca tcgtttttca aagtatagtt taatagagtg
     3301 ccctcatata tatacagaaa ttgataatct ttttttggaa tggtataagt tgtcatatta
     3361 ttttaccttt tcaaaaacaa tgagtttaag attttttgag tccaagttgg ttctactact
     3421 cttatgaaat ttcagtcgtt taaactcttc ctttaacggc ccattatatt ttaaccttaa
     3481 tcccattcgg gccagttctg tttcatttgg aattcctctt aaatacttat tgtttgatgt
     3541 gccattaatc acaatttctc cccctttttt tgtaatacgt gctgcttcgg gaaaataatc
     3601 cattaaccgc tcaacatccc gcctcttcca aaaccgcgcg cgcggccaaa tccgccgtat
     3661 cttttttcaa cagcaggtgc aacaccctga aatcctgttg cagcgcggca accttatcgg
     3721 ggtgttcgta ccagtccgcc aacgccgccg ccagtttttc cggtacggca tcatgttgaa
     3781 gcagctccgg cacagcctcc ttacccaaca ggatattcgg caggccaaca tgcggcactt
     3841 tgattttgcg tttcacataa gcataagtca gcggcgaaat cttgtagctg atgaccatcg
     3901 gacgcttaca caacgccacc tccaaagttg ccgtaccgct cgttaccagc accgcatccg
     3961 ccgccctaca caccgtttca gactgtctgt cggttaccgt cagcggtaat ccggcaaact
     4021 ccgaacgctg caaaatttcc gccaaacgcc gcttcgtcgc ctccgttgcg gcaggcagca
     4081 ggaagcgtgc ggcaggatag cgttccaaca acaataatgc cgtctgaaaa aacaccggcg
     4141 ccatatagtc aatttcgctg acgcggctgc cgggcagcag ggcgaatacg gggatgccgg
     4201 catccacgcc caaagttttc cgcgccgttt cacggtcgtc ttccaagggc ataagctgcg
     4261 ccatcggatg accgacaaac tccgcacgtc cgcccgcatc aagataaagc tgcggctcca
     4321 tcgggaacag gcacagcacg cggttgacct gatgcacgat tttgcccacg cgttcccgcc
     4381 gccacgccca aaccgacgga ctgacataat gcacggtcgg aatccccgac cgtttgagcc
     4441 gctccgccac acccagatta aaatcgggcg catcgatacc gacaaagaca tcaggtttca
     4501 acgacagcaa atcccgtacc agccccctgc gtatccgtaa aatttccggc agccgcctga
     4561 ccacttcgac aaagccgcgc accgccagcc gctcctgatc ataaaggctc tcgaaacctt
     4621 ccgccttcat cagttcgccg ccgataccga caaaacgcgc ctgcggacaa cgcttgcgga
     4681 tggcgcgtat caggtgcgcc cccaataggt cgcccgacgc ttcgccgaca ctgacggcaa
     4741 tcaaagggct ttttttatca gccatattcg tctgtcccca catactttca cgtcccgatg
     4801 ccgtctgaag gcttcagacg gcatcggggt tcacattttc gtcccgtttt ccaacatcac
     4861 cgcaaactgc gccaagtccg gcggcagctc cgccttcaac accagcggct cgcccgtgag
     4921 cggatggttc aagtgcagct cggacgcgtg caaaaacatc cgcttcaaac ccaacttctg
     4981 caaacgacgg ttcgcctgat aatcgccgta gcgttcgtcg cccgcaatcg gacagccttg
     5041 agattgcagg tggacgcgga tttggtgcgt acgacccgtt ttcagcgttg cccgcaccaa
     5101 agtcaggtgc gacagcccga caccgtgcaa aatgccgtct gaaaaacggc ttaacacacg
     5161 gaacaccgtg tgcgccgact gcccgtcctc gctgacgcgt accatctttt cgccttgtgc
     5221 gccggtatat ttgaacaggg gcagtttgac atggaaattg tcgtccggca gtttgcccac
     5281 ccccagcgca aggtagattt ttttggggtg gtcgttacgg atggcttcgt gaagtttgac
     5341 gagcgcgctg cgtttcttcg ccaccatcaa caagccgctc gtatccttgt ccaaacgatg
     5401 aaccaactcc aaatacttcg cctccggacg ggcgcggcgc aactgttcga taacgccgaa
     5461 actcacgccg ctgccgccgt ggacggcaac gccggacggt ttgtcgatga ccaaaagcgc
     5521 atcgtcttcg taaacaacgt caaacgcacg cgccggtacg gcggcacgcc tttcagacgg
     5581 catttccttc tccgccacgc gcacaggcgg aatccgcacc gtatccccct ccgcaatacg
     5641 gctgtcgggt ttgcagcgtt tcttgttcaa ccgcacctcg ccggcgcgga taatgcggtg
     5701 gatatggctc ttgggaaccc ccttgaggat ttttatcaga tagttatcaa ggcgttgccc
     5761 cgcctcgtgt tcggcaaccc ctatcaggct gaccgaatct ttgcttattt cgtgcgtttt
     5821 catctataat ccgaacatcc gtttcagcaa aaagcgcgcc cgccgcgccc ccctgaaacg
     5881 gtttacttta aaacggaatt ttatattaaa aacgcactcc gcaaagcatt ttccctgcgc
     5941 ctgttcccag ccggcaggcg cagaacgtag tcaagtttga attgattttg ccgtttcggc
     6001 gcggaagtaa gacggcagcc gggcccaagc cccaaacgca aaccgcccga aaacacaggc
     6061 atcacgataa caagaagaag ccggcaccca tttttccgac cataccgctc ggaacgcggc
     6121 agacagaccg ccgcatcgat ctttatagcc ttctgtatcc gacccttccg cacacggttc
     6181 tccggaacgt gcatccctgc ggattttcaa ctcaaaaact gattaccggt tttatccgaa
     6241 aacatcggaa aacccagcct tacggaatgc cgaaccggac cggcgcgccc gaatgccgcc
     6301 cgtccacgag gtgatcatga aaagaatgtt attcaacgca acgcaggccg aagagctgcg
     6361 cgttgccatc gtcgacggac aaaacctgct ggatttggac atcgaaacgc tgggcaaaga
     6421 acagcgcaaa ggcaatatct acaaaggcat cattacccgc atcgagccgt cgctggaagc
     6481 gtgtttcgtg gattacggaa ccgaccgcca cggcttcttg ccgtttaaag aagtatcgcg
     6541 ttcgtatttc cgcgactacg aaggcggcag ggcgcgtatt caggacgtgc tcaaagaagg
     6601 catggaagtc atcgtccaag tcgaaaaaga cgagcgcggc aacaaaggcg cggcgctgac
     6661 caccttcatc agcctcgccg gacgctatct ggtattgatg ccgaacaacc cgcgcggcgg
     6721 cggcgtatcc cgccgtatcg aaggcgaaga acgtcaagaa ctcaaagccg ctatggcgca
     6781 actcgacatt ccgaacggca tgagcatcat cgcccgtacc gccggcatcg gccgcagcgc
     6841 ggaagagttg gaatgggatt tgaactatct caaacaactc tggcaggcga ttgaagaagc
     6901 aggaaaagcg catcacgacc cttacctgct ctttatggaa agctcgctgc tcatccgcgc
     6961 catccgcgac tatttccgcc ccgacatcgg cgaaattctg gtggacaatc aagaagttta
     7021 cgaccaagtt gccgagttca tgagctacgt catgccgggc aatataggcc gtctgaaact
     7081 ctacgaagac cacacgccgc tgttttcccg cttccaaatc gaacaccaaa tcgaaagcgc
     7141 gttttcgcgc agcgtcagcc tgccctccgg cggcgcgatc gtcatcgacc ataccgaagc
     7201 cctcgtctcc atcgacgtga actccgcacg cgccactcgc ggcgcagaca ttgaagacac
     7261 cgcgttcaaa accaatatgg aagccgccga agaagtcgcc cgacaaatgc gcctgcgcga
     7321 cttgggcggc ttggtcgtca tcgacttcat cgacatggaa aaccccaaac accagcgcga
     7381 tgtggaaaac gtcctgcgcg acgcgctcaa aaaagaccgc gcccgcgtac agatgggcaa
     7441 actctcccgt ttcggacttt tagaattgag ccgccaacgt ttgaaaccgg ctttgggcga
     7501 aagcagccac gtcgcctgtc cgcgctgcgc tggcactggt gtcatccgcg gcatcgaatc
     7561 caccgccctg cacgttttgc gcatcattca agaagaagcg atgaaggaca acaccggaga
     7621 agtgcgcgcc caagtgcccg tcgatgtcgc caccttcctg ctgaacgaaa aacgcgccga
     7681 gctgtttgcg atggaagagc gtttggatgt caacgtcgtc ctgattccga acatccacct
     7741 cgaaaatccg cactacgaaa tcaaccgcat ccgcaccgac gacgtagaag aagacggcga
     7801 accgagctac aaacgcgtcg ccgagcctga agaagacgaa tccgccaaac cgttcggcgg
     7861 cgaaaaagcc aaagccgccc gtcccgaacc cgccgtcaaa ggcgtgcgcc acaccagccc
     7921 cgccccgact gccgcccccg agaaaaaaac ctcctggtgg gacagcttca aagcttggct
     7981 caaacgcatt ttcggcggca gcgaaaccca agccgcgccc gctgccgaaa cctccgaaaa
     8041 acgcagcacg gcaaaccgca gcggcagccg cgccaacaac cgccgccaaa acccgcgccg
     8101 cagcaaacgc gaaggcagca aagtagaagt ccgcgaagtg gcaggcaaaa ctgccggaca
     8161 ggaagcgcgc gccgacaaag ccgaaacgcg caacaacggc aaccgccgcc gcaacgaacg
     8221 cggcgaccgt gccgccggac gcgccgacga agcggaaatc caagaccgca acatacagcc
     8281 tgccgcaacc gttgcagatg ccgcaccgtc cgaaaccgaa gtgcaaaccg gaaaacgccg
     8341 ccgcaacggc agccgcagcg aacgcggcca aaccgcgccg gaaaccgcca ccgttgccga
     8401 aacaaccgtt cagacagcgg aaaacacgcc gtccgaaccg cataccgcag aagacaaagg
     8461 cagcaagccc aaatccgaac gcaaccgccg cgaacgcgac agccgagatg ccaaagaacg
     8521 ccgcgagcgc aacaatcagc gcgaccgccg tcaaaacggc aaaaaacgca atattccgtc
     8581 tgccgccaaa atcgagcagt acctgaatat tcacgacacc gccgacaaag tccgttccgc
     8641 cgccgcgcac gttttcggcg aaaccgacgc aaacgcgccg attactgtca gcattgccga
     8701 tccggttgca gaaagggatc ttccgacagc atctcccgcc gtttcaaacg gcgacgcacc
     8761 ggtttatgat gcggcggaaa aaatccgccg tgccaccgcc gccatcctgc ccgaaggcgc
     8821 gacaccgaaa gccgaagcac aggaaatgcc gtctgaaacc gcaaccttta cggctgcggc
     8881 ggaacaggca cgggaaaccg cacaaaccgg cggactcgtc ctgatcgaaa ccgaccctgc
     8941 cgcattgaag gcatgggcgg cacaacccga agtccaagcc ggacgcggtt tgcgccgttc
     9001 cgaacagccc aagccgtctg aagtcgcaac cgtccctgcc gaagaaatga tccaagtcga
     9061 aacccggcaa ggctgaaccg acggcggcaa aaagaggttc tgttccgcag aacctctttt
     9121 ttacatgggt tcggatacct gcaatgccgt ctgaaacttc gccattcccg tgattaccga
     9181 aacattccgt cattcccgtg aaaacgggaa tctagaacct caaactttcg gataatcttt
     9241 gaatattgcc gtcgcccaaa ggcctggatt cccgcctgcg cgggaatgac ggcggagggt
     9301 ggacgatgcc gtctgaaact tcgccattcc catgattacc gcaacctttc gtcattcccg
     9361 ccacctttcg tcattcccgt gaaaacggga atctagaacc tcaaactttc ggataatctt
     9421 tgaatattgc cgctgcccga aggtctggat tcccacaacc tttcgtcatt cccgtgaaaa
     9481 cgggaatcta gaacctcaaa ctttcagata acctttgaat attgccgctg cccgaaggtc
     9541 tggattccca caacatttcg tcatttccgt gaaaacggga atctagaacc tctaaacttt
     9601 cagataatct ttgaatattg ccgtcgccca aaggcctgga ttcccgcctg cgcgggaatg
     9661 acggtttaga agttgcccga aacctcaaaa aaaaaaccga aaccgaacaa gccggattcc
     9721 cgcaacattc cgtcattccc gtgaaaacgg gaatctagaa cctcaaactt tcagataatc
     9781 tttgaatatt gccgctgtcc aatggtctgg attcccgcct gcgcgggaat gacggtttag
     9841 aagttgcccg aaacctcaaa aaaaaaaacc gaaaccgaac agaccggatt cccgccacct
     9901 ttcgtcattc ccgtgaaaac gggaatctag aacctcaaac tttcggataa tctttgaata
     9961 ttgccgtcgc ccgaaggtct ggattcccgc ctgcgcggga atgacgattt ggaaattacc
    10021 cgaaacccaa aaacaactga aaccgaacag accggattcc cgcctgcgcg gaaatgacgg
    10081 gtcttttatc atctttaaag gctgccgcgc gccatctcga cggcggtctc cacggcagtt
    10141 atcaggctgc cggaatccgc cctgccggtt gccgccaaat cgagcgcggt gccgtgatcg
    10201 acggaggtgc ggataaaggg cagccccagt gtgatgttca cgccctgccc gaaactgtgg
    10261 tatttcaaca cgggcagccc ttggtcgtgg tacatcgcca atacggcatc cgcaccttcg
    10321 agcataaacg gttggaacaa tgtgtccgcc ggatacgggc cggcgaggtt tatcctttcg
    10381 cggcgcaggt tttcgagcgc ggggataatg gtgtcggttt cttcgtgtcc gaggtgtccg
    10441 ccctcaccgg cgtgggggtt gagtccggcg accaggattt tgggattttt gatgcagaat
    10501 ttgtgtttta agtcgtgatg caaaatgcgt gcgacgcttt caatcagcgg ttgcgtgatg
    10561 gcggcggcaa cgtctttcag cggcaggtgg gtcgttacga gggcgacgcg caggcctttg
    10621 ccggcaagca tcatcacgac ctgccccgtg ccgctttttt ccgccagata ttcggtgtgt
    10681 ccgctgaaaa aacctgtgct tgcgcgcgcg tcgttgatga tgcctttgtg cagcggcgcg
    10741 gtaacgatgc cgtcgaaaat gccgtctgaa atgcctgcga gcgcggtgtc caaaagttgc
    10801 agcacatagg cggcgttggc gggattgagc cgccctgcct caaccgcttc ggcggcaggg
    10861 atgtgcagca cttccagctc gccgtatgcc gcgccgcctg attccggatc gaagtcgcgc
    10921 aagacgacgc ttttgcccaa ggcttcggcg cgcgcgcgca ataggttttt gtcgcccaat
    10981 accgcgcagc ggcagggcag gcgtgcaaac gccaagtcca aacaaatatc ggggccgatg
    11041 ccggcaggct cgccggaagt aacggcaaaa acaggctgtt tcatcgtgtt tgctccaaac
    11101 aaaatgcgat tctaacgccg cagccgcgcg gcgatgtaaa tttttctgat tttgttgaca
    11161 atctgctaga atgggcgttt acaaaattta aaccctgctt gcataccgcc aatatgtgcg
    11221 agtttcaact ttaaggaagc gatatgaacg agaactttac cgaatggctg cacggctggg
    11281 tcggcgccat caacgatccg atgtggtcat acttggttta tatgcttttg ggtacggggc
    11341 ttttcttcac cgtaaccacg ggctttgtcc aattccgcct gttcgggcgc agcatcaaag
    11401 aaatgctcgg cggccgcaaa cagggggacg accctcacgg catcacgccg tttcaggcat
    11461 ttgtaaccgg ccttgccagc cgcgtgggcg tgggcaatat cgcgggcgtg gccatcgcca
    11521 tcaaagtcgg cggaccgggc gcggtgtttt ggatgtgggt aaccgcctta atcggtatga
    11581 gttcggcgtt tgtcgaatct tcgctggcgc agctctttaa agtccgcgac tacgacaacc
    11641 accatttccg gggcggccct gcctactaca tcacgcaagg gctggggcag aaatggctgg
    11701 gcgtgttgtt cgccctgagc ctgattttct gtttcggctt tgtgtttgaa gcggttcaga
    11761 ccaataccat tgccgatacc gtcaaagcgg catggggttg ggagcctcat tatgtcggcg
    11821 tcgccctggt gattttaacc gcgccgatta tcttcggcgg catcaggcgc atatctaaag
    11881 cggcggaaat cgtcgtcccc ctgatggcgg ttttgtacct ctttatcgcg cttttcatca
    11941 ttttgaccaa tattccgatg attccggacg tgttcggtca gattttttcg ggcgcgttca
    12001 aattcgacgc ggcagcaggc ggcttactcg gcggtctgat ttcgcaaacg atgatgatgg
    12061 gcatcaaacg cggcctgtat tccaacgagg cgggtatggg ttccgcgccg aacgccgccg
    12121 ccgccgccga agtgaaacac cctgtttcgc aaggtatgat tcaaatgctg ggcgtgtttg
    12181 tcgataccat catcgtttgt tcttgcaccg ccttcatcat cttgatttac caacagcctt
    12241 acggcgattt gagcggtgcg gcgctgacgc aggcggcgat tgtcagccaa gtggggcaat
    12301 ggggcgcggg cttcctcgcc gtcatcctgt ttatgtttgc cttttccacc gttatcggca
    12361 actatgccta tgccgagtcc aacgtccaat tcatcaaaag ccattggctg attaccgccg
    12421 ttttccgtat gctggttttg gcgtgggtct atttcggcgc ggttgccaat gtgcctttgg
    12481 tctgggatat ggcggatatg gcgatgggta ttatggcgtg gatcaacctt gtcgccatcc
    12541 tgctgctctc gcccttggcg tttatgctgc tgcgcgatta caccgccaag ctgaaaatgg
    12601 gcaaagaccc cgagttcaaa ctttccgaac atccgggcct gaaacgccgt atcaaatccg
    12661 acgtttggta aatcccgccc ttaccggagc cgcttccccg cgaagcggct tttccctttc
    12721 cgcacactgt aaaaacaggg cgaacaagcg tacaatccca accctttact tttgaatcca
    12781 tttcgttttt cagacggcat attgaatata gtggtttaac aaaaatcagg acaaggcgac
    12841 gaagccgcag acagtacaag cagtacgaaa ccgattcact tggtacttca gcaccttaga
    12901 gaatcgttct ctttgagcta aggcgaggca acgctgtact ggtttttgtt aatccactat
    12961 aaatgccgtc tgaaacaccg tcaggcaata cacacatgac ccacatgatt taccccaaaa
    13021 cctacgacgt tatcgtcgtc ggcggcggac acgccggcac ggaagccgcg cttgccgccg
    13081 cacgcatggg cgcgcagacg cttttgctct cacacaatat cgaaacgctc ggacaaatgt
    13141 cgtgcaaccc ttccatcggc ggcatcggca aagggcattt ggtgcgcgaa ctcgacgcgc
    13201 tcggcggcgc gatggcgttg gcaaccgaca aatccggcat ccagttccgc cgtctgaacg
    13261 ccagcaaagg cgcggcagta cgggccacgc gcgcgcaggc ggatcgtatc ctatataaag
    13321 ccgccatccg cgaaatgttg gaaaaccaag aaaacctcga ccttttccaa caagccgtcg
    13381 aagacgtaac gctcgatggc gaccgcattt caggcgtaat caccgcgatg ggcgtggagt
    13441 ttaaagcacg cgccgtggtg ttgaccgcag gcacgttttt gtccggcaaa atccacatcg
    13501 gtttggaaaa ctacgagggc ggacgcgccg gcgaccccgc cgccaaatcg ctgggcggac
    13561 gtttgcgcga attgaacctg ccgcaaggcc gtctgaaaac cggcacgccg ccgcgcatcg
    13621 acggacgcac gattgacttc tcccaactga ccgaacagcc cggcgacacg cccgttcccg
    13681 tcatgtccgt acgcggcaac gccgaaatgc acccgcgcca agtgtcctgc tggattacgc
    13741 ataccaacac gcaaacccac gacatcatcc gctcaggctt cgaccgcagc ccgatgttta
    13801 ccggcaaaat cgaaggcgtg ggcccgcgtt attgtccgtc tatcgaagac aaaatcaacc
    13861 gcttcgccga caaagacagc caccagattt tcctagaacc cgaaggcctg actacgcacg
    13921 aatactaccc caacggtatc tccaccagcc tgccgttcga catccaaatc gcgctcgtcc
    13981 gcagtatgaa aggtttggaa aacgcccata tcctgcgccc cggctacgcc atcgaatacg
    14041 actacttcga tccgcgcaac ctcaaagcaa gcctcgaaac caaaaccatt gccggattgt
    14101 ttttcgccgg gcaaatcaac ggtacgacag gttatgaaga agccgccgcg caaggactgc
    14161 tggcaggcgc gaacgccgtg caatacgtcc gcgaacaaga cccgctcctg ctgcgccgcg
    14221 aacaagccta tctcggcgta ttggtggacg acctcatcac caaaggcgtg aacgaaccct
    14281 accgaatgtt caccagccgt gccgaatacc gcctgcaact cagggaagac aacgccgata
    14341 tgcgcctgac cgaagacggc tacaaaatcg gcttggtggg tgaagcgcaa tggcgcatgt
    14401 tcaacgaaaa acgcgaagcc atcgaacgcg aaatccaacg tttgaaaaca acgtggtaca
    14461 cgccgcaaaa actcgccgaa gacgaacaaa tccgcgtatt cgggcaaaag ctcagccgcg
    14521 aagccaacct gcacgacctc ctgcgccgcc cgaacctcga ctacgccgcg ctgatgacgc
    14581 tcgaaggcgc gatgccgtct gaacgcctct ccgccgaagt ggtcgaacaa gtcgaaatcc
    14641 aagtcaaata ccaaggctat atcgaccgcc aaaacgaaga aatcgacagc cgccgcgaca
    14701 tcgaaacctt aaagctgccc gaggatatcg attacagcaa agttaaaggt ttgtcggcag
    14761 aagtgcagca aaagctcaac cagcacaaac ccgaaaccgt cgggcaggca agccgcattt
    14821 ccggcgtaac ccctgcggca gtggcattgc tgatggtgca tttgaagcgc gggtttaaag
    14881 acgcgaaata aacacatcgg cgcgatgccg tctgaaacac cgttcagacg gcatcgcgcc
    14941 atcccgacag gaaacatcat gcacatactg accgccggcg tggacgaggc agggcgcggg
    15001 cctttagtcg gcagcgtgtt tgccgccgcc gtcatccttc cggaaatatt cgacctgccc
    15061 ggactgaccg actccaaaaa actcagcgag aaaaaacgcg acgcgcttgc cgaaatgata
    15121 aaaaatcagg cggttgcgtg gcacgttgcc gccgcctcgc ccgaagaaat cgccagcctc
    15181 aacatcctgc acgccaccat gctcgcgatg aaacgcgccg ttgacggttt ggctgtgcgt
    15241 cccgaaagaa tattcatcga cggcaaccgc attcctgaac atttgaacat ccctgccgaa
    15301 gccgtcgtca aaggcgacag caaaatcatc gaaatctccg ccgcatccgt tttggcaaag
    15361 accgcacgcg atgcggaaat gtacgcactg gcgcaacgcc atccccaata cggtttcgac
    15421 aaacacaaag gttacggcac gaagcagcat ctggaagccc tcaaacaata cggcgtgctg
    15481 cccgaacatc gccgcgactt cgcccccgtc agaaacctgc tcgcgcagca gacgctgttt
    15541 taaaccggca caaaaatgcc gtctgaactt cagacggcat ttccagcatc gcaacttcaa
    15601 agagaaagaa cccataccgc cattcccgcg aaaaacagaa aatcaaaaaa gaaacctaaa
    15661 atccgtcatt cccgcgcagg cgggaatcca atccgtccgg tttccgtttt ttttgaattt
    15721 caggtaactt ccaaaccgcc attcccgcaa aagcgggaat ctagaaactc aaagctgcaa
    15781 gaatttatca aaaatgactg aagctcaaaa aaccggattc ctacgaaaac aggaatccgg
    15841 agtctcaggg ctggcaaaac cgttttaccc gataagtttc cgtaccgaca gacctagatt
    15901 cccgccttcg cgggaatgac gaaattttag attgcaggca tttatcggat aaaacagaaa
    15961 ttaagcgtga cgaaaattta tccgaaatca cagcaacttt tccgcgtcat tcccgcaaaa
    16021 gcgggaatct agaaactcaa agctgcaaga atttatcaaa aatgactgaa actcaaaaaa
    16081 ccggattccc gcgaaaacag gaatccggag tctcagggtt ggaaaaaccg tttttcccga
    16141 taagtttccg taccgacaga cctagattcc cgcctgcgcg ggaatgacga tatttcagtt
    16201 ttgtgttttt gatttttttg tttttgcggg aatgacgata aatgacgata taagtatttt
    16261 tattttaatc cg
//
LOCUS       DAXHRP010000029        16073 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.029, whole genome shotgun sequence.
ACCESSION   DAXHRP010000029 DAXHRP010000000
VERSION     DAXHRP010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16073
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.029"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(180..1259)
                     /gene="apbC"
                     /locus_tag="ACFM72_000703"
     CDS             complement(180..1259)
                     /gene="apbC"
                     /locus_tag="ACFM72_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HFC6257311.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIAAAIADSVQETLMPETGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTGQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIAKIYTDA
                     AFQIALSIADKGKDFSSRFPKIVVE"
     gene            1470..1545
                     /locus_tag="ACFM72_000704"
     tRNA            1470..1545
                     /locus_tag="ACFM72_000704"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1503..1505,aa:Lys,seq:ttt)
     gene            1624..2133
                     /locus_tag="ACFM72_000705"
     CDS             1624..2133
                     /locus_tag="ACFM72_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HFC6257312.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDRTVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSA
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            2476..2916
                     /gene="nadR"
                     /locus_tag="ACFM72_000706"
     CDS             2476..2916
                     /gene="nadR"
                     /locus_tag="ACFM72_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HFC6257313.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            3031..3531
                     /gene="hpaC"
                     /locus_tag="ACFM72_000707"
     CDS             3031..3531
                     /gene="hpaC"
                     /locus_tag="ACFM72_000707"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HFC6257314.1"
                     /translation="MADLQKNFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALVHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            3547..4242
                     /gene="murU"
                     /locus_tag="ACFM72_000708"
     CDS             3547..4242
                     /gene="murU"
                     /locus_tag="ACFM72_000708"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HFC6257315.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGDTPF
                     LVVNGDVLTDIDFTAAFQTASSLPEHISAHLWLVENPPHHPDGDFSLLPDGSVQSEVS
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(4487..4918)
                     /locus_tag="ACFM72_000709"
     CDS             complement(4487..4918)
                     /locus_tag="ACFM72_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC6257316.1"
                     /translation="MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPID
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            5093..6769
                     /locus_tag="ACFM72_000710"
     CDS             5093..6769
                     /locus_tag="ACFM72_000710"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HFC6257317.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            6883..7974
                     /gene="ychF"
                     /locus_tag="ACFM72_000711"
     CDS             6883..7974
                     /gene="ychF"
                     /locus_tag="ACFM72_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HFC6257318.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEEDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYEDFIALGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            8246..10123
                     /locus_tag="ACFM72_000712"
     CDS             8246..10123
                     /locus_tag="ACFM72_000712"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC6257319.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKDWLPGGFLGVDIFFV
                     ISGFLMTTILHREMSGGGRFSLKAFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFF
                     LLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVA
                     RKSLRVQFGFLAALCALSLAASFMPSAFDKYYLPHLRACEMLVGSLTAVWMRYRQQRN
                     LAVGRCCAAAGALFSSCILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPL
                     KKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAVVLILLLSLFSY
                     HCIEKPFKKWQGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCH
                     NNTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGY
                     ASRVFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRM
                     LHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQALRPDDESTLKANARIREL
                     AAKYPNVYIIDAAAYIPADFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHN
                     H"
     gene            10186..11481
                     /gene="tyrS"
                     /locus_tag="ACFM72_000713"
     CDS             10186..11481
                     /gene="tyrS"
                     /locus_tag="ACFM72_000713"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HFC6257320.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGTKPEAQRILAEEMTRLIHGEAALQAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPVFEISDGINAVEALVKTGLASSNKEARGFVNAKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            12008..12928
                     /gene="ribF"
                     /locus_tag="ACFM72_000714"
     CDS             12008..12928
                     /gene="ribF"
                     /locus_tag="ACFM72_000714"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HFC6257321.1"
                     /translation="MRIRLGRHNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFASRTGKTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPDHR
                     YALGGVFVVDADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKCW"
     gene            13070..15859
                     /gene="ileS"
                     /locus_tag="ACFM72_000715"
     CDS             13070..15859
                     /gene="ileS"
                     /locus_tag="ACFM72_000715"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HFC6257322.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDRPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DTLKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGRYIGETPRVAGMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCENYDKLSDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFAMLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
BASE COUNT         3716 a         4351 c         4371 g         3635 t
ORIGIN      
        1 tttccgataa atgccgcaat ctcaaatccc gtcattccca cgaacctaca ttccgtcatt
       61 cccacgaaag tgggaatccg gaacgtaaaa tctcaaaaaa accgttttat ccggcaagtt
      121 tgcccgccgg caggcgcggg gcttgggacg gcattgctgt tgcggtttcg gacacggctt
      181 tattcgacga caattttagg gaagcggctg ctgaagtctt tgcctttgtc ggcaatgctc
      241 agggcgattt ggaatgcggc atcggtgtag attttggcga tggcggggtg ttcgtcgaac
      301 agttgcgccg gtgtgccgcc gtccatggct tcgcgcacgg gcaggcttag gggaagctgt
      361 ccgagcaggg ggacgttgag gcgtgccgcc aaatctttgc cgccgtccgt gccgaacagt
      421 gcttcgctgt gtccgcagtt ggagcagatg tggacggaca tattttccaa tacgcccaaa
      481 atgggaatgt tgactttgcg gaacatatcc acggctttgc gcgcgtctat cagggcgatg
      541 tcctgcggcg tggttacgat gacggaaccg gttacgggga tgcgctggga cagcgtgagc
      601 tggatgtcgc cggtaccggg gggcaggtcg atgaaaagat agtccacttc gtcccactcg
      661 ctttggaaca tcagctgctg caatgcctga ctgaccatcg ggccgcgcca gacgacggct
      721 tggccggtat cgacgagaaa gccgatagac atgacctgta tgccgtctga agattcgacg
      781 ggaatgagtt tttggttttt ctgatcgggt ttgcggtcgt ccacacccaa catggtcggt
      841 tggctcgggc cgtaaaggtc ggcatcgagt acgccgacgc gcgcgcccat gcgcgccatt
      901 gcggcggcaa ggttggcggt ggttgttgat ttgcccacgc cgcctttgcc ggaggcgacg
      961 gcaatgatgt ttttcacacc tttgatggtg gtaacgccag gttggacttt atgtgtgccg
     1021 atttccgtgt ccatggacag atggatgtgt gtgtcgcctg tttcgggcat cagggtttct
     1081 tgtacggaat cggcgatggc ggcggcgatg tgcgcgacag ggaagccgaa atgcagggcg
     1141 atatggatgc cgtctgaacg ctgttcgacc gaacggacgg ccttttcgcc gccgagcgtg
     1201 cgtgccgtat tcggaacggc gacggtgtcg aggagggtgc ggatgttttg tatgttcata
     1261 atgtgtgttt ctgtgtgcag tttgggaaac gggcggaaag tgtacattga tttcgggcgg
     1321 tttgcttttc cttgtgcgaa cttttacacg gtatgcggcg gattgtgaaa atccgttgtc
     1381 aaaatatccc gtgcaaacag tggtctgcaa ttaagcctgt aaaatttgct tgacgaggta
     1441 ggatggtgct gtataatgca cggcttatcg ggtcgttagc tcagccggta gagcagcgga
     1501 cttttaatcc gttggtcgag cgttcgaatc gctcacgacc caccagataa ccggaagcca
     1561 agttttgaga cttggctttt tgtttgcctg ccggttgcgt gggcgtaccg tttgagagag
     1621 cgtatgaaaa agaaactgct ttcgggcatc aaatttgccg ttcagacggc attggtgttt
     1681 ttattggtgt cgctgttttt ggattggata cgcaagcccg acgaacctgc cggtgcggca
     1741 gggcggcctt tgaccctgct gtcggggcag cggctgactt tgggacagtt tagccgggat
     1801 aggacggtgc tggtgtattt ttgggggagc tggtgcggcg tgtgccgtta tcagtcgccg
     1861 ataatcgatg atttggcggc ggacggcgtg ccggtcgtcg gcgtggcggt acgttccggc
     1921 agttcggcgg aagtggcggc gtatatggca aaacgcggct tgggctttcc gactgtcaac
     1981 gatgaggacg ggggtttggc aaggtcttgg cggattgtcg caacgcctgc cgtcgttttg
     2041 gtcaaaaatg ggaaaatggt tcactatacg acgggaatca gcagttattg gggcttgcgc
     2101 gcacgaattt ttcaggcgga tgttttcggt taacttttgt ttttgttaaa ctttacgcta
     2161 tgtagagaat caaacggcat ataccttgct cgtctgatgc ggcggctttt gttttttctg
     2221 gaagaaagtt ctttcgacag taaatgtaat actttgttga gattgtaggg aaaatagact
     2281 aagatataac tattaaaata tttttagata ggattatcgg aattaaagtc ttttataccc
     2341 agtcgtccga tgcggtttat agcgtattgt tgctatatgt tcgttttgtt atataacggt
     2401 tgcatcaaaa tttacgccca caggctttcc cgacggtttg aaagtttgat tttcgataac
     2461 ttggagactt gaacaatgcc tacccaatca aaacatgcgt ctatcaatat cagtctgata
     2521 caggcaaggg aagccctgat gacccaattc aggcctattc tgaatcaggc gaatattacc
     2581 gatcagcaat ggcggattat ccgtcttttg gcggaaaacg gcacgctgga ctttcaagat
     2641 ttggcgaatc aggcgtgtat tctgcgcccc agcctgaccg gtatcctgac ccgccttgaa
     2701 aaagcgggtt tggttgtccg cctgaaacct tccaacgacc aacgacgtgt ttttctgaag
     2761 ctgactgccg agggcgagaa gctgtatgag gaaatcggcg aagaagtgga cgagcgttac
     2821 gacgctatcg aggaagtgct gggccgcgag aaaatgctgc tgcttaaaga cctgttggca
     2881 gaacttgcca aaatcgagga tgcgttgaac tcgtaatacg ccgtaacgcg cggaaatgtc
     2941 cgaccgacgg ctttttgaat cagaactgct gcacatgggg ggtgccttgt gtgcagcatt
     3001 cttatatagg ggacagttta aaggggaaaa atggcggatt tgcagaaaaa ttttcaaact
     3061 tcgttccgtg atgcgatggc atcctgtgcg gcaggcgttc atgtcatcac gacagacggt
     3121 gcggcagggc gttacggcat tacaatgacg gcggtcgcgc cggttaccga cgagccgccg
     3181 accgtgatgc tgtgcatcaa ccggagtgcg cgaatcattc cgatcctgtc ggaaaacggc
     3241 agcctgtgca tcaatacgct ggcggacgaa catcaggatg ttgccgaaca ttttgccggg
     3301 ctgaccggcc tgtcgcccga agagcgattt gcctaccaca tctggcatcg cggcaaaacg
     3361 ggacaacttg aaatagaggg cgcgttggtg cacctgcacg ggcatattgt cggcaaacat
     3421 gaaatcggca cgcattttgt gttttacgtc aggctcgacg aaatcaaaaa ctgcgggtgc
     3481 aaacgccccg cgctgctgta tttcagacgg cagtttagat ttttagactg atattcggac
     3541 agatatatga aagcgatgat actggcggca ggacgcggcg agcgtatgcg ccctttgacc
     3601 gataccactc cgaagccgct gcttgatgtg gcgggtaagc ctctaatcgg ttggcaccta
     3661 tgccgtctga agcaggcggg gtttaccgaa atcgtcatca accacgcttg gctgggtcgg
     3721 cagatagaag atgctttggg cgacggctcg gcttatggcg tgaacatcgc ctattcgccc
     3781 gaacccgcag gcggtttgga aacggcaggc ggcatcgcgc aggcattgcc gctgttgggc
     3841 gataccccgt ttttggtcgt caatggcgac gtgctgaccg acatcgattt taccgccgcg
     3901 tttcagacgg catcgtccct gccggaacat atttccgccc atctgtggct ggtggaaaat
     3961 ccgccgcacc atcctgacgg cgatttttcc ctgctgccgg acggcagcgt acagtcggaa
     4021 gtatccggcg gcaacggatt gacatttagc ggcgtgggta tttaccgtcc tgaaatgttt
     4081 gacggaatcg aagcgggcag tgtggcgaaa ctcgcgcccg tattgcgggg cgaaatgcgg
     4141 caaaaccgcg tgagcggtca gaagcatacg ggcttgtggc tggatgtcgg cacggtatgc
     4201 cgtctgaaag aggctcaagc ccttgcaggg gcttggaagt gaaataaaac ggtggcttgc
     4261 cgagccggct gccgaacggt tccgaccgga tgtccagcat attttcgtgg aggcgtgaaa
     4321 atagggcgtt cggggctttc cgtccaacaa atgccatctg aagccgaccc tgtcggatgc
     4381 ggcggtttgc cgtcggcgcg gtgtcggatt ttattgggta actttgttca gaccgccgcc
     4441 cgtcagattg tcaaaacccg gtttcaggcg gtatggcgga ttcggtttaa cgtttcaacg
     4501 ccagcaccaa cacgcccgcc gttaccagcc ccaagcctat ccattcctgc gtgttcgggc
     4561 gttcgtccaa gaaaaccacc gccatcagcg cgaccaagac caggctgaat ttgtcgatgg
     4621 gggcgacttg cgaggcgttg cccagttgca gggctttgaa gtaggcgagc caggatgcgc
     4681 cggtagcaag gccggatagg ataaggaatg tccagttgcg ccccgtaaag ccgttcacac
     4741 cctgccattt gccggtgtag gtcaaaaaca ataccaaagc ggcgaggatc accaaggtgc
     4801 ggataaaggt ggcgaaatcg gaatcgatgc cctgtaaacc cattttggcg aaaacggcgg
     4861 tcaatgaggc gaagcctgcc gatgccaatg cccaaaacag ccatgcgttg ctgctcatgt
     4921 tttctccttg gattgtgaac aatatgaacg gtatttttgt tgcagcgtca aaaatttcac
     4981 tgcgggtttg gtgcggataa cgttataata tgcctgatat tattttcaat ccacctgttt
     5041 gtcgcctgat gctttcagac ggcatgtccc tcctcatttc taaaggaaaa tcatgagctt
     5101 caaaaccgat gccgaaatcg cccaatcctc caccatgcgc ccgattggcg aaattgccgc
     5161 caagctgggt ctgaatgccg acaacattga gccttacggt cattacaagg cgaaaatcaa
     5221 tcctgccgaa gcgttcaaac tgccgcaaaa acagggcagg ctgattttgg ttaccgccat
     5281 taatccgact ccggcgggcg aaggcaaaac caccgtaacc atcggtttgg cggacgcgtt
     5341 gcgccacatc ggcaaagatg ccgtgattgc cctgcgcgaa ccttctctgg ggccggtgtt
     5401 cggcgtgaaa ggcggcgcgg caggcggcgg ctatgcccaa gttttgccga tggaagacat
     5461 caacctgcac ttcaccggag attttcacgc catcggtgcg gcaaataatc tgcttgccgc
     5521 gatgctcgac aaccatatct atcagggcaa cgagttggac atcgacccca aacgcgtgct
     5581 gtggcggcgc gtggtcgata tgaacgaccg ccagttgcgc aacatcatcg acggcatggg
     5641 taaacccgtt gacggtgtga tgcgccccga cggttttgat atcaccgttg cctccgaagt
     5701 gatggcggta ttctgccttg ccaaagacat cagcgatttg aaagagcgtt tgggcaacat
     5761 cctcgtcgcc tacgccaaag acggcagccc cgtttacgcc aaagatttga aggcacacgg
     5821 cgcgatggcg gtcctgctca aagatgcgat taagcccaat ttggtgcaaa ccatcgaagg
     5881 cacgcccgcc ttcgtacacg gcggcccgtt cgccaacatc gcccacggct gcaactccgt
     5941 aaccgcaacc cgtctggcga aacaccttgc cgattacgcc gtaaccgaag caggcttcgg
     6001 cgcggatttg ggcgcggaaa aattctgcga catcaaatgc cgccttgccg gtttgaaacc
     6061 tgatgcggcg gtcgtcgtgg cgactgtccg cgctttgaaa tacaacggcg gcgtggaacg
     6121 tgccaacctc ggtgaagaaa acctcgaagc cttggcaaaa ggtttgccca acctgctgaa
     6181 acacatttcc aacctgaaaa acgtattcgg actgcccgtc gtcgttgcgc tcaaccgctt
     6241 cgtgtccgac tccgatgccg agttggcgat gattgaaaaa gcctgtgccg aacacggcgt
     6301 tgaagtttcc ttgaccgaag tgtggggcaa aggcggcgtg ggcggtgcag acttggcgcg
     6361 caaagtcgtc aacgccatcg aaaaccaacc gaacaacttc aatttttcct acgatgttga
     6421 gctgagtatt aaagacaaaa tccgtgcgat tgcccaaaaa gtgtacggcg cggaagatgt
     6481 tgatttcagc gcggaagcgt ctgccgaaat cgcttcactg gaaaaactgg gcttggacaa
     6541 aatgccgatc tgcatggcga aaacccaata ctctttgagt gacaacgcca aactgttggg
     6601 ctgccccgaa ggcttccgca ttaccgtgcg cggtatcact gtttccgcag gcgcaggttt
     6661 catcgtcgcc ctgtgcggca acatgatgaa aatgcccggc ctgcccaaag ttccggctgc
     6721 cgagaaaatc gatgtggacg aacacggcgt gattcacggc ttgttctgag cggtttttga
     6781 aaccggatgc cgtctgaagc cgtttcagac ggcatttttt cggaacgcga gcggcggtat
     6841 gctataatcc gccgttaaat ttctctattt tcaggaaaaa acatgagttt gaaatgcggc
     6901 atcgtcggtt tgcccaacgt cggcaaatcc accctcttta acgcgctgac ccaatcgggt
     6961 atcgaagcgg caaactatcc tttctgcacc atcgaaccca acgtcggcat cgttgaagtc
     7021 cccgatccgc gtatggctga attggcaaaa atcgtcaatc cacaaaaaat gcagcctgcc
     7081 atcgtcgaat ttgtcgacat cgccggtttg gttgcaggtg caagcaaagg cgaaggcttg
     7141 ggcaaccagt tcctcgccaa catccgcgaa accgatgcga ttgtgaatgt cgtgcgctgc
     7201 tttgacgacg acaacatcgt tcacgttgca ggcaaagtcg atccgattgc cgacatcgaa
     7261 accatcggta cggagttggc gcttgccgac ttggccagcg tcgaaaaagc catcgtccgc
     7321 gaagaaaaac gcgcacgctc aggcgacaaa gacgcacaaa aactggtcga tctgtgcaaa
     7381 aaactgctgc ctcatctgga cgaaggcaag cctgtacgct ccttcggttt ggacgcagaa
     7441 gaactcgcca tgctcaagcc gctgttcctg ctgactgcca aaccggccat gtatgtcggc
     7501 aacgtttccg aagacggttt tgaaaacaac ccgcacctcg accgcctgaa agaattggct
     7561 gcaaaagaaa acgcgccggt tgtggctgta tgcgccgcaa tggaaagcga aatcgccgaa
     7621 ttggaagagg acgaaaaagc cgaattcctc gccgaaatgg gcttggaaga accgggcctg
     7681 aaccgcctga tccgcgccgg ctacgacctc ttgggcttgc aaacctactt taccgccggc
     7741 gtaaaagaag tccgcgcctg gaccatccac aaaggcgaca ccgcaccaca agccgccggc
     7801 gtgattcaca ccgactttga acgcggcttc atccgcgccc aagttatctc ctacgaagat
     7861 ttcatcgctt taggcggcga agccaaagcc aaagaagccg gcaaaatgcg cgtagaaggc
     7921 aaggaatatg tcgtgcaaga cggcgatgtg atgcactttt tgtttaacgt gtaacccaaa
     7981 tgcggcaggt tttcagacgg ctttgccaga aatgccgtct gaagccggtt ttggtggttt
     8041 tcggcgtttc catacaccgc cggaatgcgg ctgcatcaaa ataaaatccc gtccgcattt
     8101 ccgatttgcc ctccccgatt cctgcaaaac aaaccgcctg ccccgctgtt gcaaaaatcc
     8161 gtccggcatt ccgaatatcc cgagccccga tacaaaatga cctttcagat ggcatttgcg
     8221 ccgccgcgat gaaagcaaaa atattatgag ccaagcctta ccctaccgcc cggacatcga
     8281 cacattgcgc gccgccgccg tcttgtccgt catcgtgttc catatcgaaa aggattggct
     8341 gccgggcggg tttctcggtg tcgatatatt ctttgtgatt tcaggctttt tgatgacgac
     8401 gattcttcac cgcgaaatgt cggggggggg gaggttttcc ctgaaggcat tttatatccg
     8461 ccgcatcaag cggattctgc ccgcattttt cgccgtattg gcggcaacgc tggcaggcgg
     8521 cttcttttta ttcaccaaag atgatttctt tcttttgtgg aaatccgcgc tgaccgcctt
     8581 gggtttcgcc tctaacctgt attttgcaag ggggaaggat tatttcgatc ccgcgcagga
     8641 agaaaagccc ctgctgcaca tctggtcttt gtcggtcgaa gaacaatttt actttgtctt
     8701 tccgatactg ctgctgcttg tcgcccgcaa aagcctgcgc gtacagttcg gcttccttgc
     8761 cgcactgtgc gccttaagcc ttgccgcttc ctttatgcct tccgcgttcg ataaatatta
     8821 cctgccccac ctgcgcgcct gcgaaatgct ggtcggatcg ctgaccgccg tgtggatgcg
     8881 gtaccggcaa cagcggaatc tcgccgtcgg cagatgctgt gccgccgccg gcgcattgtt
     8941 ttcctcgtgc atactgtccg cctgcctgtt tgcctattcg gaacaaaccg cctatttccc
     9001 ggggcccgcc gctttgattc cctgtctggc tgttgccgcg ctgatttatt tcaaccatta
     9061 cgaacaccca cttaaaaaat ttttccaatg gaaaatcacc gttgccgccg gtttgatttc
     9121 ctattcgctt tatctgtggc attggccgat attggccttt atgcgctata tcggtccgga
     9181 taacctgccg ccttattcgc cggcggcggc ggtcgtcctg atattgctgc tttccctgtt
     9241 ttcttaccac tgcatcgaaa aaccgtttaa aaaatggcaa ggttcgttcg cacaatccgt
     9301 tttatggatt tatgccttgc ctatgctcat tttgggggcg ggctcgtttt tcgcgatgag
     9361 gctgccgttt atggcgcaat acgaccgttt ggggctgacg cgttccaaca cctcctgcca
     9421 caacaatacc ggcaaacaat gcctgtgggg ggatacggaa aaacagccgg agctgctggt
     9481 tttgggcgac tcccacgccg accattacaa aacattcttc gatgccgtgg gcaaaaaaga
     9541 aaaatggtcc gccactatgg tttccgccga cgcttgcgcc tatgtggaag gctacgcgtc
     9601 ccgtgtgttc caaaactggg cagcctgccg cgccgtttat cgctatgccg aagaacacct
     9661 gccccggtat tcaaaagtgg ttttggcgat gcgctggggc agccaaatgc ccgaaaacag
     9721 ccgctccctt gcctatgatg ccggtttttt ccaaaaattc gaccgtatgc tgcataaact
     9781 ctcgtccgaa aaacaagccg tttacctgat ggcggacaac cttgcctcgt cttacaacgt
     9841 ccagcgcgcc tatatcttgt cttcacgcat accgggttac cgccaagccc tgcgcccgga
     9901 cgacgaaagc accctgaaag ccaatgcccg catcagggaa ttggcagcca aataccccaa
     9961 cgtctatatt attgatgccg ccgcctatat ccccgcagat tttcaaatcg gcggattgcc
    10021 ggtttactcg gacaaagacc acatcaaccc ttacggcggc acggaattgg caaagcgttt
    10081 ttccgaaaaa caacggtttc tcgatacgcg ccataaccat tgattcgctt aaatttgtta
    10141 caatcggcgg tttgcaaaaa cgctaatttt ttttgaaaga gaccgatgag cgtcatccaa
    10201 gacctgcaat cgcgcggcct tatcgcgcaa accaccgaca tcgaagcctt agacgctttg
    10261 ttgaacgaac aaaaaattgc cctttattgc ggcttcgacc cgaccgccga cagcctgcac
    10321 atcggacacc tgctgcccgt attggcattg cgccgcttcc aacaggcggg gcatacgccg
    10381 attgctttgg tgggcggcgc gaccggtatg atcggcgacc ccagcttcaa agccgccgaa
    10441 cgcagcttga attccgccga aactgttgcc ggctgggtgg aaagtatccg caaccaatta
    10501 acccctttct tgagctttga aggcggaaat gccgccatta tggcgaacaa tgccgactgg
    10561 ttcggcagca tgaactgcct tgacttcctg cgcgacatcg gcaagcattt ctccgtcaac
    10621 gccatgctga acaaagaatc cgtcaaacag cgcatcgacc gcgacggcgc aggcatttcc
    10681 ttcaccgagt tcgcctactc cctgctgcaa ggctacgact ttgccgagtt gaacaaacgc
    10741 cacggcgcgg ttttggaaat cggcggctcc gaccaatggg gcaacatcac cgccggtatc
    10801 gacctgaccc gccgcctgaa tcaaaaacaa gtgttcggcc tgaccctgcc tttggttacc
    10861 aaatcagacg gcaccaaatt cggcaaaacc gaaggcggcg cggtgtggct gaacgcaaaa
    10921 aaaacctcgc cgtaccagtt ctaccaattc tggctgaaag tcgccgatgc cgatgtgtat
    10981 aaattcctga aatactttac cttcctgtcc atcgaagaaa tcgatgccat cgaagccaaa
    11041 gacaaggcaa gcggcaccaa gcccgaagcg caacgcatcc tcgccgaaga aatgacccgc
    11101 ctgattcacg gcgaagccgc cctgcaagcc gcgcagcgca tttccgaaag cctgtttgcc
    11161 gaagaccaaa gcagcctgac cgaaagcgac ttcgagcagc tcgccctcga cggcctgccc
    11221 gtatttgaaa tttcagacgg catcaacgcc gtcgaagcct tggtcaaaac cggtttggca
    11281 tcctccaaca aagaagcacg cggctttgtc aacgccaaag cggttttgct caacggcaaa
    11341 cctgccgaag ccaacaaccc caaccacgcc gccgaacgcc ccgacgatgc ctgcctgctg
    11401 accgacgaac acaaacgttt cggcaaatac accatccttc ggcgcggcaa acgcaaccac
    11461 gcgcttttgg tttggaaata atccgattgc cgcagaaatg ccgtcattcc cgcgcaggcg
    11521 ggaatccgga cctgtccgca cggaaactta tcgggcaaaa cggtttctta gattccacgt
    11581 tctagattcc cgcctgagcg ggaatgacga gtttcaagat tacggtgttg tcggaacgca
    11641 actgaaccgt cattcccacg aaagtgggaa tctagaatct cggggtttga gcaactgttt
    11701 ttatccgata agtttctgtg cggacaggtc cggattcccg cctgcgcggg aatgacggcg
    11761 gagggttgtt tgtctcggtt tacctggtta aaaaagaacg attttcactg atgttgcatc
    11821 aggtttgggg cgatgtttca acacatagca ccgcgcctgc tgcgcgcttt atgcgtttgg
    11881 cgcgttcggc tgcgggaaat ttgcctactt ttcccgcgtc gggcgggcgt aacgggcggc
    11941 acactgtcta taaaccgcaa taccgtttac aatgaccgcc tgtttgacca cactcccgaa
    12001 cataacaatg agaatcaggc tggggcggca caacgcgccc gactttccac agggtgccgc
    12061 cgtaaccata ggcaatttcg acggcgtaca cctcggacac aaacacatcc tccaaaaact
    12121 ccgcctcgaa gccgatgcgc gcggcctgcc cgtcgttgcc gtcatctttg agccgcaacc
    12181 caaagaattt tttgcaagcc gcaccggcaa aaccccgccg tgccgcatca gccccctgcg
    12241 caccaagctt gaattattgg aaggcacagg ctgcgtcgat gccgtctggg ttttacgttt
    12301 cgatcaaaat ttttccgaaa tatccgcgca agggtttatc gaccgcctgc tgcgtcaaac
    12361 cttgaatacg cgttatttgc tcgtcggcga cgatttccgt ttcggcgcgg ggcgcgaagg
    12421 ctgttttgaa cttttggcac aacagcccga tatgcagacc gaacgcacgc cttccgtcat
    12481 cgtcgaagac atccgcacca gcagtaccgc cgtccgccaa gccctttcag acggcaacct
    12541 cgcttatgcg aaaaaacttt tgggacacga ctacgttttg gggggcaggg tggtgcacgg
    12601 cagaaaactc ggacgcaccc taaacgcccc gactgccaac atccgcctgc ccgaccaccg
    12661 ttatgccctc ggcggcgtgt tcgtcgtcga tgcggacggc gcattcggca cgcggcgcgg
    12721 cgtggcgagc ttcggcttca atcccaccgt tgatagcggc tgttctcaaa agcttgaagt
    12781 ccacctgttc gactttcaag gcgacctgta cggacaacgg ctgaacgtcc gcttcctgca
    12841 caaactgcgc gatgaggaaa agtttgacgg tatggaagaa ctgaaaaggc agattgaagc
    12901 cgatatggaa gccgcaaagt gttggtagaa aaaccttata caaaccatcc gattgggcta
    12961 caatcaatct tttaactttt cagacggtat aggggtttcc cgttgtgaaa tactgtttga
    13021 ggcgcaatgc cgtctgaaac cgaaataccg caacaataga gatcaaaaaa tgaccgatta
    13081 cagtaaaacc gtaaacctgc tcgagagccc gtttccgatg cgcggcaatc ttgccaagcg
    13141 cgagcctgca tggctgaaaa gctggtacga gcaaaaacgc taccaaaaac tgcgcgaaat
    13201 cgccaaaggc cgtccgaaat tcatcctaca cgacggccct ccgtatgcca acggcgacat
    13261 ccacatcggt catgccgtca ataaaatcct caaagacatc attatccgca gcaaaactca
    13321 agccggtttt gacgcgcctt atgtgccggg ttgggactgt cacggtttgc ctatcgaagt
    13381 aatggtggaa aaactgcacg gcaaagatat gcccaaagcg cgtttccgcg aattatgccg
    13441 cgaatacgcc gccgaacaag ttgcccgcca gaaaaaagac tttatccgct tgggcgtgtt
    13501 gggcgattgg gaccgtcctt acctgactat ggattttaaa accgaagccg ataccgtgcg
    13561 tatgcttggt gaaatctaca aatccggcta tctctaccgc ggcgcaaaac cggttcagtt
    13621 ctgcttggac tgcggttctt cgctggcgga agcggaagtg gaatacaaag acaaagtatc
    13681 gcctgcgatt gacgtgggct atccgtttaa agacactgcc gcgcttgccg ccgcattcgg
    13741 tttggcaggc atcgagggca aagcgtttgc cgtcatttgg acgactacgc cttggacgct
    13801 gccggcgagc caagccgtat cggcgggcgc ggacgtggtt taccaactga ttgatacgcc
    13861 caaaggcaaa ttggtgctgg cgaaagattt ggcggaagac actttgaaac gctacggctt
    13921 ttcagacggc attgctattc tcgccgaaac caccggcgac aagctggaaa atctgcacat
    13981 gaaccatccg ttcctcgaac gcgatattcc catgctcaac ggcgaacacg ttaccaccga
    14041 tgccggtacc ggcttggtac acaccgcccc cgcgcacggt ttggaagact acgccgtctg
    14101 caataaatac ggcatcgagc tttacaaccc cgtcaacgcc gaaggccgat acatcggcga
    14161 aacgccgcgt gtcgccggta tgcgcgtttg ggaggcgaac cccgtcatcc tgcaatggtt
    14221 ggaagaaacc ggcaaccttt tggcaagcag taaaatcgaa cacagctacg cccactgctg
    14281 gcggcacaaa acgccgctga tttaccgcgc gacaggtcaa tggtttgtcg gtatggacaa
    14341 agccggtgcc gacggcaaaa ccctgcgcga caaagccatc aaggccgtgg acgacaccga
    14401 attcttcccg tcttggggtc gtgcgcgttt ggaagccatg attgaaggtc gtcctgactg
    14461 ggtggtttca cgccaacgct attggggcac gccgatgact ttctttgttc acaaagaaac
    14521 gggcgagctg catccgaact ctgccgaact tttggaaaaa gttgccctga aaatcgaaga
    14581 aaaaggcatc gaagcgtggt tctccctcga taagagcgaa ctcttgagcg cggaagattg
    14641 cgaaaattac gataaacttt ctgacacaat ggacgtatgg ttcgactccg gctcgaccca
    14701 ttattccgtt gtgaaacaac gcgaagaatt ggaatggccg gctgatttgt atctcgaagg
    14761 cagcgaccaa caccgcggct ggtttcaatc gtccatgctg accggctgcg cctcatcaat
    14821 gggtcgcgcg ccgtataaac agctgctgac ccatggtttc gttgtcgacg gcgaaggcaa
    14881 aaaaatgtcg aaatccatcg gcaacgtcgt tgcaccgcaa gaggtttata acgaattcgg
    14941 cgcagacatc ctgcgcctgt gggcggcatc taccgattac agcggcgaat tggcgatttc
    15001 caaagaaatc ctcaaacgcg taaccgaaag ctaccgccgt atccgcaata ccttgagctt
    15061 tttgtttgcc aacttgagcg actttaatcc gattgaagat gccgtgcaac aggcggatat
    15121 ggtggaaatc gaccgctacg ccgtggtatt ggcacgtcag ctgcaagagc gtctggcagg
    15181 cgattactat ccgcgttatg ccttccactt tgccgtaaaa gacattgttt ctttctgctc
    15241 ggaagacttg ggtgcgttct acctcgacat cctgaaagac cgcctctaca ccaccaaagc
    15301 agacagccat gcacgccgca gcgcacaaac tgccctgtat cacatcacac gcagtttggt
    15361 tctcttgatt gcaccgattt tgtgcttcac cggcgaagaa gcgtgggaca tcatcggcgg
    15421 cggcgaagaa gacagcgtcc tcttccatac ttggcacgag ttcccgacca tcaacgaaaa
    15481 aaccgaagcc gaactggtga aaaaatggac ggcaatccgc gaagcccgcg aagcggtaac
    15541 cgccgccatc gagcctttgc gcgccgacaa aaccgtcggt tcgtccttgc aagccgaagc
    15601 cgaaatcacc gcgccggaag aaatggccgg ctacctgaac gccttgggcg aagaattgcg
    15661 ctttgccatg ctggtgtcta aagcagaagt gaaagtaggc agcgaacttg ccgttgccgc
    15721 taaagccagt gatggtgaaa aatgcgaacg ctgctggcac tacacccgcg atgtgggcgc
    15781 ggttgcaggc tatgaaaccg tctgcaaacg ctgtgcagag aatgtcggcg gagaaggcga
    15841 aacgcgccat tacgcctgat aaagtttgag caaatgccgt ctgaaaccgc cgaacagcat
    15901 ttcagacggc attttttgtg ccgcgatttg tctttataac ggcggagggg tttcaagatt
    15961 gcggtgttgt cggaatgcaa ctgaaccgtc attcccacga aagtgggaat ctagaatctc
    16021 gaagtttcag tcatttccga tagattcccg cctgtgcggg aatgacggat ttc
//
LOCUS       DAXHRP010000030        15903 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.030, whole genome shotgun sequence.
ACCESSION   DAXHRP010000030 DAXHRP010000000
VERSION     DAXHRP010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15903
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.030"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            35..1108
                     /locus_tag="ACFM72_000716"
     CDS             35..1108
                     /locus_tag="ACFM72_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HFC6257323.1"
                     /translation="MSITIQNLNKHFGAFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGNILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQICTKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTAIGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(1165..2691)
                     /gene="ilvA"
                     /locus_tag="ACFM72_000717"
     CDS             complement(1165..2691)
                     /gene="ilvA"
                     /locus_tag="ACFM72_000717"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HFC6257324.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSHGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            2839..4008
                     /locus_tag="ACFM72_000718"
     CDS             2839..4008
                     /locus_tag="ACFM72_000718"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HFC6257325.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNRPTVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWACLTGQ"
     gene            complement(4133..4705)
                     /locus_tag="ACFM72_000719"
     CDS             complement(4133..4705)
                     /locus_tag="ACFM72_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HFC6257326.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(4772..5755)
                     /locus_tag="ACFM72_000720"
     CDS             complement(4772..5755)
                     /locus_tag="ACFM72_000720"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HFC6257327.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            complement(5922..5997)
                     /locus_tag="ACFM72_000721"
     tRNA            complement(5922..5997)
                     /locus_tag="ACFM72_000721"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5962..5964),aa:Gln,seq:ttg)
     gene            complement(6006..6081)
                     /locus_tag="ACFM72_000722"
     tRNA            complement(6006..6081)
                     /locus_tag="ACFM72_000722"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6046..6048),aa:Gln,seq:ttg)
     gene            complement(6094..6169)
                     /locus_tag="ACFM72_000723"
     tRNA            complement(6094..6169)
                     /locus_tag="ACFM72_000723"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6134..6136),aa:Gln,seq:ttg)
     gene            complement(6177..7022)
                     /gene="ispE"
                     /locus_tag="ACFM72_000724"
     CDS             complement(6177..7022)
                     /gene="ispE"
                     /locus_tag="ACFM72_000724"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HFC6257328.1"
                     /translation="MNIADGRQAFSAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PLLSV"
     gene            complement(7032..7613)
                     /locus_tag="ACFM72_000725"
     CDS             complement(7032..7613)
                     /locus_tag="ACFM72_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HFC6257329.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTVDSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            complement(7753..9597)
                     /locus_tag="ACFM72_000726"
     CDS             complement(7753..9597)
                     /locus_tag="ACFM72_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC6257330.1"
                     /translation="MLPNRFKMLTVLTATLIAGQVSAAGGGAGDMKQPKEVGKVFRKQ
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSV
                     QGREKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTEEQRSRAALTAAMMYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLTDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            complement(9762..10598)
                     /gene="panC"
                     /locus_tag="ACFM72_000727"
     CDS             complement(9762..10598)
                     /gene="panC"
                     /locus_tag="ACFM72_000727"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HFC6257331.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLAAEGIAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFHIVSPDIACFGKKDYQQLAVIKGFVED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLVQGSLDYA
                     GLEKRAVQSLTEYGWVVDYVEIRRADTLEVARAGDKKLVVLAAACLGTTRLIDNLEIK
                     LP"
     gene            complement(10721..11512)
                     /gene="panB"
                     /locus_tag="ACFM72_000728"
     CDS             complement(10721..11512)
                     /gene="panB"
                     /locus_tag="ACFM72_000728"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HFC6257332.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            complement(11654..11729)
                     /locus_tag="ACFM72_000729"
     tRNA            complement(11654..11729)
                     /locus_tag="ACFM72_000729"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11694..11696),aa:Thr,seq:tgt)
     gene            complement(11764..11839)
                     /locus_tag="ACFM72_000730"
     tRNA            complement(11764..11839)
                     /locus_tag="ACFM72_000730"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11804..11806),aa:Thr,seq:tgt)
     gene            12005..12796
                     /locus_tag="ACFM72_000731"
     CDS             12005..12796
                     /locus_tag="ACFM72_000731"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HFC6257333.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLNVFEGRVLELPAKSHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFYL"
     gene            12851..13492
                     /locus_tag="ACFM72_000732"
     CDS             12851..13492
                     /locus_tag="ACFM72_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC6257334.1"
                     /translation="MQKPETIHISGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSGGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(13570..14493)
                     /locus_tag="ACFM72_000733"
     CDS             complement(13570..14493)
                     /locus_tag="ACFM72_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC6257335.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHSLFEPGKVMFYYRKTSRESEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPIDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            14657..15526
                     /locus_tag="ACFM72_000734"
     CDS             14657..15526
                     /locus_tag="ACFM72_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HFC6257336.1"
                     /translation="MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDDKNPALIGFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPVVLSLTAAYRINGSKTLSSNTKYKAGNYWMLNPNISFAAN
                     DRISLTGGIQWLGKQPDRLDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            15569..>15903
                     /locus_tag="ACFM72_000735"
     CDS             15569..>15903
                     /locus_tag="ACFM72_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257337.1"
                     /translation="MKKQITSAVMMLSMIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGEWIPNAVGGIMGGVGGHFSYMASAIASGSYNREAHWATIGGGALIG
                     AMNPINGGRA"
BASE COUNT         4035 a         4587 c         3647 g         3634 t
ORIGIN      
        1 acaaaaaact cgccgccgcc gaaaggaacg cagcatgagc attactattc aaaatctaaa
       61 taaacacttc ggagcgttcc acgcgctgaa aaacatcaac ctcaacgtcc ccaccggcaa
      121 actcgtttcc ctactcggcc cttcaggctg cggcaaaact acacttttac gcattatcgc
      181 cggactggaa aacgccgacg gcggcaatat tctctttgac ggacaagacg taaccgccaa
      241 acatgtgcgc gagcgcaaag tcggcttcgt gttccaacac tacgctcttt tccgccatat
      301 gaacgtgttt gacaacgtcg ctttcggttt gaccgtattg cccaagtccg aacgcccgtc
      361 caaaggacaa atctgcacta aagtcgaaga attgctgaaa ctcgtacaac tctcgcattt
      421 ggcaaaatcc tatccgcacc aactctccgg cgggcaacgc cagcgcatcg ccctcgcccg
      481 tgcgcttgcg gtcgaaccga aactcctgct tttggacgaa cccttcggcg cgttggatgc
      541 caaagtacgc aaagaattac gcacctggct gcgcgacatc catcacaacc tgggtgtaac
      601 cagcattttg gttacacacg accaagaaga agccctcgaa gtttccgacg aaatcgtcgt
      661 gatgaaccac ggcaaaatcg aacaaaccgg cagcgccgaa gccatttacc gcaaacccga
      721 aaatgccttc gttaccgagt tcctcggcga aaccgacgca tttgaaggac gcatcgaaaa
      781 aggcttctgg cattataacg gcttcgcgtg gaaattggac gcacaataca aatggcagga
      841 gcaaaccgcc atcggctaca tccgtccgca cgaatggcag atcgccgccg aacacgaaac
      901 accgatgatt tgtgccgaaa tcgaaaaagt ccacgccgtc ggggcattga cgcatatttt
      961 ggtgaaacac ggcaaacaag acgtgcacat cacgctggct ggcagcgatg ccgcgcgtta
     1021 cccaatcgcc gaaggcaaag aattgaagct gattccaaaa caggtttatg tcttctctca
     1081 aaacgaactg attgaatatt cgatttaacc atgaaagcgc aatgccgtct gaaaggcttt
     1141 cagacggcat tgtgctttca agcgtcaggc aagaaacagc ttgtacgcgg cattttgcgt
     1201 ttcctcatga tagctgtatc ccagactttc caagaaaccg tcaaatgcgg cggcatcgtg
     1261 cggcggcaca tcgataccga ccaaaatccg cccgtaatcc gcaccgtggt tgcggtaatg
     1321 gaaaagcgta atattccacc ctccctgcat atggttcaaa aagcgtgcca atgcccccgg
     1381 acgctccgga aactcaaaac tgaccaaacg ctcgttttct actttgtccg tccgccctcc
     1441 aaccatataa cggatatgga ttttggcaat ctcatcatcg gtcaggtcga cattgggcaa
     1501 tcccgcctca tccaaccggc tgccgataac cgccaaatcc tgcgggcctg ccgcttgaag
     1561 tccgacaaag atatgcgctt tttcatcgtc tccgtagcgg tagttgaact cggtaatatt
     1621 cctatttccc aatatattga caaacttaag gaagctgccg cgttcttcag ggatggtaac
     1681 ggcaaaaata ccttcgttgc cctcgcccaa ttcgctccgt tccgaaacgt ggcgcaaacg
     1741 gtgaaaattc atattcgcac cgctggtaac ggcaatcagg gtttggtttt ccgcgccttc
     1801 tcgggcgata taggctttca gacccgccaa cgccaacgcg cccgccggct cggtaatgct
     1861 gcgcgtgtca tcgaaaatat ccttgaccgc gccgcaaacc gcatcggtat cgactgtaat
     1921 gatttcatcc aaaagttctt tgcagaggcg gaaggtttcg tttccgacga ctttgaccgc
     1981 agtgccgtct gaaaacagcc cgacatcttt caaatggacg atttcacccg cttcgaccga
     2041 ctgcttcata cagcaggaat cgttggtctg aacgccgata actttgattt cgggacggac
     2101 ctgcttgata aatgccgcca cgcccgccgc caaaccgcca ccgcctatcg gtacgaatac
     2161 ggcgcggatt ggatcgggat gctggctgac aatttccatc cccaccgtcc cctgtcccgc
     2221 aatcacatca ggatcatcaa acggcgcgat ataggttaac ccttcttttt ccgccaactc
     2281 catcgcataa tcgtaggcat cgttgtatga aacgccccgc aaaaccacct cgccgccatg
     2341 gcttttaacc gcatccactt tgattttcgg cgtagtttcc ggcataacga taacggcacg
     2401 gcagcccaaa cgctgtgcgg acaatgccac gccttgagca tgattgcccg cgcttgccgc
     2461 aatcacgccg caagcgagcg catctttcgg caacttggac attttgttgt acgcgccgcg
     2521 tattttgaac gaaaaaaccg gctgcaaatc ttcgcgtttc aaaaggatgt tgtttttcaa
     2581 acgtacagaa aggctgcgtg ccggttccaa aggcgtttcg accgccacat catagacaga
     2641 tgccgtcagg atgcggatga ggtaatcgga ataaggaagg ggcgtgttca taattcaata
     2701 tgggataatc ggtttattaa aatcgcaaaa cccaaaacca tacgcccaag acggcgcgaa
     2761 atcaagaaaa atccgcccga tcagacaccc taagcgtata atcggcagac tgaaacacgc
     2821 acacaattag aatatttcat gacagcacat aaaatcctgc ccgtcctgct ttccatcatc
     2881 ttaggcgttt ctcacgcaac ggctgcatcg cccgcgccca acagaccgac ggtacacgcc
     2941 gcccccacgt tccaaacacc cgaaaccctc acagcggcac acatcgttat cgaccttcaa
     3001 agcaaacaga ttttatccgc caaaaacatc aatacccctg ttgaaccggc ggcactaacc
     3061 caactgatga ccgcatatct ggttttcaaa aacatgaaat cgggcaatat ccaatctgaa
     3121 gaaaacttaa aaatacccga atccgcatgg gcttcagaag gaagcagaat gtttgtacgt
     3181 cccggcgata cggtcagcac cgacaaactc ttaaaaggca tgattgcact atccgcaaac
     3241 gatgccgccc taacccttgc cggccggctg ggcaacggct cgattgaaaa ttttgtgcaa
     3301 caaatgaaca aagaagcccg acgcttgggc atgaagaaca ctgtattcaa aaacccgaca
     3361 ggcttgagta gagaaggaca ggtttccacc gccaaagacc tcgccctgct gtctgaagca
     3421 ttgatgcgcg actttccgga atattacccg ctgttttcca tcaaatcttt caaattcaaa
     3481 aatatagaac aaaacaaccg caatatcctt ttatataggg acaacaatgt aaacggtctg
     3541 aaagccggac acacagaaag cggcggctac aaccttgccg tgtcatactc cggcaacggc
     3601 aggcacatcc ttgtcatcac attgggttcg gaatcggcgg aaacacgcgc atcagacaac
     3661 agcaagctgc tgaactgggc attgcaggcc ttcgatacgc ccaaaatata tccgaaaggc
     3721 aaaaccgttg cccaaatcca aatttccgga ggcagcaaaa aaaccgtccg cgcaggcttc
     3781 ctcaaagaag cctacatcac tctgccacat aaggaagcga aaatggcaga acaaattcta
     3841 gaaaccatac agccgattcc cgccccagta aaaaaagggc aaattttagg aaaaatcaaa
     3901 atcagacaaa acggatacac cattgccgaa aaagaaatcg tcgcactgga aaatgtaaaa
     3961 aaaagaagcc ggtggcaaag gctttgggcg tgtctgacag ggcagtaatc tgccgtttca
     4021 aatatcccgt ttttccaaca aataaagaaa tgccgtctga aacacggttc agacggcata
     4081 aaacaacagg gcggtacgta ttgcatacgc gccgccctgc tgctgaaatc aattagcgtt
     4141 tcttaccggt aacggtagca acagccagat tttcgttacg tttcagggaa acgctttcta
     4201 caccttcagg caatttgatg tctgacaagt gcagaatgtc gccggcaacc acttcagcac
     4261 aatccaaatc caagaaagca gggatgttgg caggcaaagc aactacttca acagaagtgt
     4321 ttaacagaga tacgcggccg ccttgcagtt tgaccgcttg ggaattttca gcgttaacga
     4381 tgtgcagggg aacgcggatg cgtacgggtt ggtctgcttt cacagcttgg aagtcgatgt
     4441 gttgaacttc gcggcggaac gggtgcattt ggaaatcgcg gacgataacg tctttggttt
     4501 cgccgttcag agacaattta atcaacgcag tatggaaaga ttctttttcc aatgcgtaga
     4561 atacagtttt gtgatccaca gcgattgcaa cgggctcttg gccttcaccg tacaaaatgc
     4621 cggggatttg gccttcgcga cgcaggcggc ggctcgcacc agtgccttgt gcttcacgaa
     4681 cagaggcttg aatttcataa gtcatgttaa atactccaat ttaaataaaa ctaccgtcat
     4741 cggccgcgac cagcttaaga cggcttcggg cttatggcag caacatgctg cctgtcatca
     4801 cttcttcatt gaaaagatat gagacggatt cttcattgct aatgcggcgg acggtttcgg
     4861 ccaacagacc ggcaatcgtt acctgacgga tacggtcgca gtttttagcc gcttcagaca
     4921 aaggaatggt atcggttacg accacctggt cgatttcgga tgaggcgata cggctgaccg
     4981 cctctccgga gaatacggcg tggctggcat aggctagaac acgttcagcc ccccgctctt
     5041 tcagggcgac ggcggctttg cacagcgtat ttgcagtgtc aatcatatcg tccacaatca
     5101 gacaggttct accttgaata tcgccgatga tgttcatgac ttccgccaca ttggctttcg
     5161 ggcggcgttt gtcgatgatt gccaagtcgg cattcaggga ttttgccacg gcgcgggcgc
     5221 ggacgacacc gccgatgtcc gggctgacga cggtcagatt ttcaatccgc tgttgtttga
     5281 tgtcgttcaa cagaatcggg gtggcataaa tattgtccac cggaatatcg aagaaacctt
     5341 gaatctggtc ggcatgcaaa tcgacagtca aaacacggtc gatccctgcc gaatacagca
     5401 tatttgccac cagtttggca gaaatcggaa cgcggacgga acgcggacgg cggtcttggc
     5461 gcgcatagcc gaaatacgga atggctgtgg taatacgacc tgccgaagca cgcttcagtg
     5521 catccgccat cgtcaggatt tccatcaggt tgtcattggt cggcgcacag gtcggctgaa
     5581 ggatgaaaac atcgcgcccg cgtacgtttt ccaacagttc gacggcaact tcgccgtctg
     5641 aaaacttgga tacggaagca ttgcccaaag aaatgtccaa atgcctgaca acacgttgtg
     5701 ccaattcggg attggcattg cctgtaaata ccatcaaact gtcgtacgca gccatattct
     5761 cacctgattt tatgtttaac ttccgctcag aaaacacaat gcttccctct gcttgtacca
     5821 agcccgacat tatacctgca acatccgaca caaacaaagg catttcaata tttttatttc
     5881 tatgaaataa aagcgtgtaa gcaggcttac acgcttttat ttggctgggg aggaaggatt
     5941 cgaaccttcg catgctggaa tcaaaatcca gtgtcttaac cgcttgacga ctccccaaaa
     6001 agggctggct ggggaggaag gattcgaacc ttcgcatgct ggaatcaaaa tccagtgtct
     6061 taaccgcttg acgactcccc aactcgtttg acttggctgg ggaggaagga ttcgaacctt
     6121 cgcatgctgg aatcaaaatc cagtgtctta accgcttgac gactccccaa caatgtttat
     6181 acggacaaca aaggatgttt tgaaagaccc tctgccaaat atgcctcgta caaatctgaa
     6241 acttgtcggt atatattgta tgcgctattc ctatcttgac acgccgtgaa tacacacgca
     6301 ccggaacctg tcattaaggc aaatccatat cgggacaact cggaataggc tttccaaact
     6361 tcagggtatt ctttaaatac aactgcctgc atatcatttc taaacggttg cagattttgg
     6421 aaagtcggca ttatgcttga ggcggaattt cgtgtcaagc tttcgtgtgt gaaaattttt
     6481 gcagtggaaa cgtggacggg cggtttgacg atgacatacc actgtttcgg aatatccatt
     6541 tcgtccagcc tgtcgcctat accccgcgca aacgcatttt tgccgaaaat aaaaaacggt
     6601 acgtccgccc ccagagccgc gcccgaatca atgagctgcc gctgcgtcag accgcactgc
     6661 caccaacggt tcaacaccag caaaacggtt gccgcatccg agcttccgcc gcccaaaccc
     6721 gcccctgtcg ggattttttt gtccagccat atttccacgc cggcggggtt gcgcgcatat
     6781 ttttgcagca acgatgcggc acggtagctc aaatctactt cctgcggcat tccatcaacc
     6841 ggattgtgca ggatgatttt gccgtcgtcc ctcggtttca aatatacggt atcctgcaaa
     6901 tctatcaggc agaatatgct ttcgatattg tgataaccgt cttcccgcct gccggtaatc
     6961 ctcaaatcga gattcagttt tgcaggtgcg gaaaacgcct gccgtccgtc cgcaatattc
     7021 atctgtccgc cttatctcgt gcgcgccgca cagcgttccg gggtttcggt ttcagacggc
     7081 ataccgattt cggtgaaaac cagcctgatg ttcaaatttc cgttattcag ttgcaacgtt
     7141 cggacttgcc ccccactgtc gacggttctg ccgacagtcc aaccgtattg ttccaatatg
     7201 ccgtccggca ggatgcggta aggcgcgccc gccacacgcc tgccatctgc ccagatatgc
     7261 agatattgga ttggcagttt gaaaccgacc agctgcctgc tcaattcttc cgcactttcc
     7321 gcctgataga catttccttt gccgtccact gccaatgcgc cgtccctgtc ttgacacaac
     7381 tgcccgagcg tactgcccaa aggggtattg atattgatgg tttccacggg cggttggtat
     7441 gtccaatcga aatttgcata cgaacctttc ccttccgctt tcactgccaa ccgcccttct
     7501 gctgcaaaac tgctgatgtg ttcggacggc tgccacaggt tttcgttatt ttgaggtaat
     7561 tgcgcgcaag cggtcaaaag caggatgacc gatgcggata cggtgtgttt catcagaatt
     7621 tccttaacgg atgccatcct gccggccgat gggttcggcg tgccgtgcaa aacgcgtgcg
     7681 aactgcgtgc cgtttgcccg aatgccccgg cttcccggca aaccttatgc cgtctgaaag
     7741 gatggacctg cattatttcc gaggttttcg ggaaggttgg ggcaatgcga tgccgtgacg
     7801 tttgagcgtt tcccgccata ttttcttgtc tcccgtaagg tgtgccgcct gcgtccatac
     7861 gtcaaccgcc tgatcgcgtt cgcccaatgc ccacaacact tcgcccaaat gggcggcaac
     7921 ttcgggctcg gggtcgtttt caaacgaata ccgcagatac ggcagcgcgc tttccgcgtc
     7981 gcctttcagg taatacgccc agcctatgct gtcgttgaca gcggtatcgt ccgggttgat
     8041 ttggtatgcc gtctgaagca gggcgaaacc ttcgtccaaa cgtttggaat cggtcagcag
     8101 gctgtagccc agattattca taatctgagc gttatcgggt gcaagcctga acgccctttc
     8161 aagatctgaa atcatttttt tccgcttgcc aagccgatcg taaacaactg accgctgtac
     8221 caatgcctct gcctgtaact ctgtattact gccggcaggc ggtttttcga taatcttgtc
     8281 caaccccctc aaagcctccc gtttatcggg cagcttcgac agggcgagca tctgtatttt
     8341 ggacaaattg tctgccgtaa aataccgccc ctgctgttcg ggaagtttcc gcaccctgcc
     8401 gatctgccgc aaagccgccc tgccgccgtc caactcgaca gccgccgcag ccgccagcac
     8461 acctttgtcg aacaggtatt ccggcgcgga tacttttttc agccactgcc tgactttggc
     8521 gtaatccctg cggtcggcat acatcatcgc cgccgttagc gccgccctgc tccgctgttc
     8581 ctccgtcccc ctgccgtatg ccttttcggc gtagccgtcg ataacggaag caccttcttt
     8641 tcggtttgcc gccaatatcg ctgcctgaat atacaggtct gcattcggat tgcgttccaa
     8701 cagcacgttc aaacgcgcat aggcatcatc cagcctgtgc agggaaacca gattcataat
     8761 ttccatttcc tgccagacgg ccgaaaggtt ttgggtgtct gtctgctcga aaaagccgtc
     8821 gagtatttcg ggatatttgc gtgcagtcag acgcaacgtc attaaagtgg ggggcaatat
     8881 ttccgtatcg agcttcgcca aacgctgcaa agctccgatt gccttttcct tttcgcgtcc
     8941 ctgtacgctg aacaccacat cggcaaccgc cgcttcgggc agatgttcat atttcaacgc
     9001 cgcgcggcga accgctttcg atgctttttg cgccaacccg tcctgttgca cggcggcttg
     9061 tgccaacaat aaaaacaccc tgcggttctg tccttcgtcc gcctgagcca gcacttcttc
     9121 cagtccgtcc agatgctgat ttcctctttc cctcagcacg ttccgcagcc accccgcccg
     9181 tttttgcgcc ttacccggta taggctcaat ctgccgccat ttctgataaa tcatttccgc
     9241 ctgttcaaac gcgttcagcg acacggccat ttccaaggcg cgttcggcga cttcggggga
     9301 ttttgtgcgt tccaacatca gcatataggt tgccagagcc gttcccgcct gccccttttg
     9361 caaggcggtt tcccctccca gcaacgtaaa tatctgatta acccgctcgc ccactgccgc
     9421 aagccgtgcg cgttcgtttt tgatttcttc ctcgctgtaa cgctgctgct ttctgaaaac
     9481 ctttccgact tccttcggct gtttcatatc ccccgcaccg cctccggcgg cagatacctg
     9541 tccggcaatc aaggttgccg tcaacacagt taacattttg aaacggttag gtaacataat
     9601 catcctttat ccgacagccg tccgaacctt cagacggcat ataatcaggc gtaactttat
     9661 cacaagcaga atcgtttgta gatttgcgaa accccgttca aaaaaataaa tgccgtctga
     9721 aacgcaaatc cgcttcagac ggcattcccg acgcttgcgg tttaagggag ttttatttcc
     9781 aaattgtcaa tcaggcgcgt cgtccccaga caggcggcgg ccaagaccac cagtttctta
     9841 tctcccgccc gcgccacttc gagcgtatcg gcgcggcgga tttcgacata atcgaccacc
     9901 cagccgtatt ctgtcaggga ttggacggca cgtttttcca aacctgcata atccaaactg
     9961 ccctgcacca aggattcggc aacagccttt aattcgcggt acaggcgcgg tgcttcgtcg
    10021 cgttccgccg cactcaaata ctggttgcgg ctcgacagtg ccaacccgtc ttccgcgcgc
    10081 cctgtatcaa caggcactat ttcaacatca aaattcaaat cttcgacaaa acctttaatc
    10141 acggcaagct gctggtaatc cttcttacca aaacaggcaa tgtccgggga aacgatgtgg
    10201 aacaatttag aaacaaccgt tgccacaccg cgaaaatgcc ccgggcggaa tttgccgcac
    10261 aactcatttt gcagattggg cggttcgacg ttgtaacgct gttccacgtt cggatagagt
    10321 tctttctcat cgggcgcgaa aacaacggca atgccttcgg cggcaagttt gtccgcatcc
    10381 tgttgcaaag tgcgcggata tttgtcgaaa tcctcgccct gaccgaattg caggcgattg
    10441 acgaaaatgc tgaccacgac actgtccgcg cgttttttcg cctcacgcac aagcgcaaga
    10501 tgtccttcat gcagattgcc catggtcggc acaaatgcca cctttcccgc atttttacgc
    10561 cacgcgcgca gttctcgaat ggtatgtatg atttgcataa cggtaatcct tatccttcgg
    10621 gcttcctgcc cgacaaaacg cgccgattat acgcgccgcg cacggcaaaa caaaatgccg
    10681 tctgaaacgg ctttcagacg gcatgctgca tgtaaaccgc tcaatctgca aaaatatgtt
    10741 ccgcagcagg gaaggttttg gctttgactt cggcaacata cgcccgaacc gccgcttgaa
    10801 cactatcatg cccctgcata aagtttttga cgaatttcgc cgtcttaccc gggaaaatgc
    10861 cgagcatatc gtgcatcacc aaaacctgcc cgtcgcaatc cgcacccgcg ccgatgccga
    10921 tggtcggaca ggaaacagtt tcagttacct tttttgccag ttccgccagt acgcactcca
    10981 tcagcacgac cgccgccccc gcatcgtcat gcgccttggc atcgttaagc aacgcctgcg
    11041 ccttgccgcc gcgcccctga actttatatc cgccgaaggc aaacacggat tgcggggtca
    11101 gaccgatgtg cgcacaaacc ggaataccgc gcatttgcaa aaattcagtc gtttccgcca
    11161 tccacacgcc gccttcgagt ttaaccatat gcgcgccggc agccatcagt tcggcggcgg
    11221 cggcaaacgc ctgctcctta ctctgctgat atgcaccaaa cggcaaatcg ctgacaatca
    11281 tcgcattttt tgcaccgcgt gctacacatt cggtgtgata acacatatcg cgcaggctga
    11341 cgggcagcgt cgatttccgc ccctgaaccg ccatccccaa agaatcgccg accagcagca
    11401 tttccacgcc ggcatcgtcc atcagcgcgg caaaactgga ttcgtaagcg gtcagcatag
    11461 cgattttttc gcccgccgcc ttcatttttt gcagtgtgtt cacagtaatc atcagatatt
    11521 gttaccccgc ccttttcaga cggccttttc agtttgaaac gggctattat agtgaaatgc
    11581 ccgcagccct gccaccgacc gtgccgcaaa tgcaaaacag cccgactgtt ttacacaatc
    11641 ggactgtcaa atctggtgcc ggcaccaaga gtcgaactcg ggaccccctg attacaagtc
    11701 aggtgctcta ccaactgagc tataccggct tactgaaatg ttttgcaaca ccatcagcag
    11761 aaatggtgcc ggcaccaaga gtcgaactcg ggaccccctg attacaagtc aggtgctcta
    11821 ccaactgagc tataccggca aagaaagcga attatgcagg caatgccgca ccttggcaag
    11881 gaatttatcc gaaagccccg gcaaatccga ataagtaatt tatttgaaaa gaaattaatt
    11941 tgaaacagaa caagcatcgg cattctgata aaatatccgc ctttcaaacc gaccgttcac
    12001 accgatggca agacatccct accgccgcct gcgtcctgca aaatccggct ttcccgaagt
    12061 cggcatttcc gaagaaggca atatccgttc gcttcacttg ggcagcgaca ccgttcaaag
    12121 ctcgatgaac ctcgaccacc cgtccgagct ggtgctctct tacagccgcg cgatgatggg
    12181 ctggctgctg tttaccgacg ctcttccgca acatatcacc caaatcggct tgggcggcgg
    12241 ctcgtttgca cgctggatag acacctacct gcccgacacg cgccaaaccg ccgtggacat
    12301 caatcctcag gtcatcgcca ttgcccgcaa cctgtttgag ttgcctttcg agggcgagaa
    12361 atttgaaatt attgaagcgg atggtgcaga gtacatcaaa gtcttccgcc acaacaccga
    12421 tgtgattttg gtggacgggt tcgacggcga acaaatcatc gatgcgctgg ttgaagaacc
    12481 gtttttccga gactgccgaa acgcactctc ttcagacggc atattcgtaa ccaactggtg
    12541 gagcggcgac aaacgctacc aacgcttcat cgaacgcctg ttaaacgtct ttgaagggcg
    12601 cgtattggaa cttcctgcca aaagtcacgg caatgtcgcg gtaatggctt tccaaagcag
    12661 ccccaaagag caaaacatag acaaactcaa aaaacgtgcc gacaaactga gcaacgctta
    12721 cggattggac ttccaccgca tgctcgccga cctgaaagca tccaacccca acaacggcaa
    12781 acatttctac ctttaagcaa ctatcttcgc ggctgcatcg gaacatgcgg aaaatcaaga
    12841 ggaaaccatt atgcaaaaac ccgaaaccat acacatatcc ggtcctgccg gcattttaga
    12901 aaccatccat atcccgtccg aacaagtacc ggcacgcggt gttgccgtca tcaatcatcc
    12961 caaccccctc cagggcggaa caaacaccaa caaagttatc caaactgccg ccaaagcctt
    13021 aagcaaactc ggcttccact gctacctgcc caaccttcgc ggcgtaggcg gcagcggagg
    13081 cacacatgat tacggacgcg gcgaaacgca agactgcctc gccgtcatcg attatgcccg
    13141 cgcccaacac cccgaagccc ccgaatttgc cttatccggc ttctccttcg gcggttatgt
    13201 cgccacattt gccgcacaag cgcgcatacc cgatttattg ctgctcatcg gcgcggcagt
    13261 ctgccactat accggccgcc ccgagccgtc cgccgttccc aatgttgcca aaacgctgat
    13321 gatacacggc gcggaagacg aagtcgtcga aatcgaaaaa gccctgaaat gggcggaacc
    13381 gcaagatttg cccgtcatta ccatcgccgg ttccacgcat ttctttcacg gcaaactcat
    13441 cgtcctgcgc gacaccatcc tccgcttcgc gcccgtatgc ctgaacggat aaaacccctt
    13501 tccgacggca tcgataatgt aaaacccgta tcggcggcat ctgccgatac gggtttgcgt
    13561 tccctctcat tataggcaaa atccgctgca aaacaccctt tcccgacccg acaaaggatc
    13621 tgcaaacgca atcttttttg ccaatagctt caaaggtttc cgataatcct cgctgcccgc
    13681 ttcagacggc acgggataga gcgcgtcatt caacagcggc atacccaaac ccatcatatg
    13741 cacgcgcaac tggtgtttct tgccggtatg cggcgtaagg cggtaaaggc tgaattcccc
    13801 cctgttttca atcagttcga ccgtcgtatg tgcgtttggt tcgccttccg cctcttgcgt
    13861 cgtaaaaaat ttctcacccc ttaccaaacg cgaaaccaca tcaatcggat acggcaaatc
    13921 cgtccttgtc ggcgcaagcg cctcatacgt tttccatacc gttttgtttt gaaacatcgt
    13981 ctgataagcc ccacgcgtgg caggattgtg cgacaacaac atcacgcctg ccgtatcctt
    14041 gtccaagcgg tgcagcggcg taatgtcctc aacattcaaa tgctgcaatt caggccgcaa
    14101 acgcaggcgc gtgagcaggg tttcccgcaa aaacctgccg ctggggatga cgggcagaaa
    14161 atgcggtttg tccaccacaa tcaaatgctc atcaatatgc aaaatctttt cttcaaacgg
    14221 aatacgcggc tcgctctcac ggctggtttt acggtaataa aacatcacct tacccggctc
    14281 gaacaaagaa tgttcgtcca acgccgcacc atccgaaccg accacaaaac cgctgttcaa
    14341 ccgcctgcgc caatcgtccg cgcccacaaa aggaaagcgg atgcacagaa aatgcagcag
    14401 cggcagcccg taaaactgct tttcatgcgg cagcaccaaa taactgggtt tgacaccgtt
    14461 caacagcgga agaggattat tgcgtttttt catgcggcgg attgtaaccg tttttcacaa
    14521 acttttcaga cggcatatcg aaacataatt gacaaaaaca aacatattgt tttttatgat
    14581 ttaaaaattt atttagacaa gattatcgga tattcattat tatcagtaaa taagaattaa
    14641 tatcaatagg agaaatatga agcgcatctt tttgcccgcc ttgcccgcca tcctgccttt
    14701 atccacttat gccgacctgc ccttgacgat tgaagacata atgaccgaca agggaaaatg
    14761 gaaactggaa acttccctta cctacctgaa cagcgaaaac aaccgcgccg aacttgccgc
    14821 accggtttac attcaaaccg gcgcaacctc gtttatcccc attccgaccg aaattcaaga
    14881 aaacggcagc aataccgata tgctcgccgg cacgctcggt ttgcgctacg gactgaccgg
    14941 caataccgac atttacggca gcggcagcta tctgtggcac gaagaacgca aactcgacgg
    15001 caacggcaaa acccgcaaca aacggatgtc cgacatatcc gccggcatca gccacacctt
    15061 cctcaaagac gacaaaaacc ccgccctaat cggctttctt gaaagcacgg tttacgaaaa
    15121 atcgcgcaac aaagcctcgt cgggaaaatc gtggctcatc ggtgccacca cctacaaagc
    15181 catcgacccc gtcgtcctct cattgactgc tgcctaccgt atcaacggca gcaaaaccct
    15241 ttcaagcaac accaaataca aagcaggcaa ttactggatg ctgaatccca atatatcctt
    15301 cgccgccaac gacagaatca gcctcacggg cggcatccaa tggctgggca agcagcccga
    15361 ccgtctggac ggcaaaaaag aatccgcaag aaacacatcc acctatgccc atttcggcgc
    15421 aggtttcggt ttcaccaaaa ccacggcttt aaacgcatcc gcacgtttca acgtttcagg
    15481 gcaaagcagt tccgaactga aatttggcgt acagcataca ttttaagcag gttttgattt
    15541 tccaaccttg taatccaaag gagttattat gaaaaaacaa atcacctcag ccgtaatgat
    15601 gctgtctatg attgcccccg caatggcaaa cggattggac aatcaggcat ttgaaaaata
    15661 cgtattccac acgcaggcag atgcgccgat gcagttggct gagctttctc aaaaggagat
    15721 gaaggagact gagggggagt ggattcctaa tgctgttgga ggcattatgg gaggagttgg
    15781 agggcatttc agctatatgg ctagtgctat tgctagtggc tcgtataatc gagaggcaca
    15841 ttgggcaaca attggaggtg gtgcgttaat tggtgcgatg aaccctatta acggaggaag
    15901 agc
//
LOCUS       DAXHRP010000031        15824 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.031, whole genome shotgun sequence.
ACCESSION   DAXHRP010000031 DAXHRP010000000
VERSION     DAXHRP010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.031"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(60..135)
                     /locus_tag="ACFM72_000736"
     tRNA            complement(60..135)
                     /locus_tag="ACFM72_000736"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(99..101),aa:Glu,seq:ttc)
     gene            complement(855..2267)
                     /gene="trkA"
                     /locus_tag="ACFM72_000737"
     CDS             complement(855..2267)
                     /gene="trkA"
                     /locus_tag="ACFM72_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HFC6257338.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(2365..3888)
                     /locus_tag="ACFM72_000738"
     CDS             complement(2365..3888)
                     /locus_tag="ACFM72_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HFC6257339.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAIGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            complement(4195..5001)
                     /locus_tag="ACFM72_000739"
     CDS             complement(4195..5001)
                     /locus_tag="ACFM72_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC6257340.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            complement(5053..5304)
                     /locus_tag="ACFM72_000740"
     CDS             complement(5053..5304)
                     /locus_tag="ACFM72_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257341.1"
                     /translation="MSSIEQRLEYLEEANDVLRMQNHVLSTAFKALIHALPADTAEVA
                     VESIQLAFEDALAELNYEDSPHTDLFHDVTYAFFREKER"
     gene            5404..6165
                     /locus_tag="ACFM72_000741"
     CDS             5404..6165
                     /locus_tag="ACFM72_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257342.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLQKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            6310..7479
                     /gene="metZ"
                     /locus_tag="ACFM72_000742"
     CDS             6310..7479
                     /gene="metZ"
                     /locus_tag="ACFM72_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HFC6257343.1"
                     /translation="MSKKLHPQTLAIRGGKEQTRYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGTERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGAILVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAMYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            7565..7771
                     /locus_tag="ACFM72_000743"
     CDS             7565..7771
                     /locus_tag="ACFM72_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HFC6257344.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(8715..9467)
                     /locus_tag="ACFM72_000744"
     CDS             complement(8715..9467)
                     /locus_tag="ACFM72_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC6257345.1"
                     /translation="MTDILIDNTATEAVRALIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAAHINLHFGNAAEQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
     gene            complement(9571..10038)
                     /locus_tag="ACFM72_000745"
     CDS             complement(9571..10038)
                     /locus_tag="ACFM72_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004518841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC6257346.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            complement(10031..11607)
                     /locus_tag="ACFM72_000746"
                     /pseudo
     CDS             complement(10031..11607)
                     /locus_tag="ACFM72_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237220.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
     gene            complement(11628..13931)
                     /gene="parC"
                     /locus_tag="ACFM72_000747"
     CDS             complement(11628..13931)
                     /gene="parC"
                     /locus_tag="ACFM72_000747"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HFC6257347.1"
                     /translation="MNTQAHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPPHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            14079..14762
                     /locus_tag="ACFM72_000748"
     CDS             14079..14762
                     /locus_tag="ACFM72_000748"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HFC6257348.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            complement(14835..15779)
                     /gene="tehA"
                     /locus_tag="ACFM72_000749"
     CDS             complement(14835..15779)
                     /gene="tehA"
                     /locus_tag="ACFM72_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HFC6257349.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAAASVVWLLLVAAYLIKIFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GVLSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRS"
BASE COUNT         3440 a         3985 c         4627 g         3772 t
ORIGIN      
        1 aattgcggga atgacgactc ataataaaaa acctgcttga aacaagcagg tttttgaatt
       61 ggcacgccca cggggattcg aaccccggtt gccgccgtga aagggcagtg tcctaggcct
      121 ctagacgatg ggcgcgtgga aacggacatt atacatactt atagaaattt agcaatacga
      181 tgccgtctaa acaaatgtca ggggggcgtt tgtctgatcg catcacaata taaaaacata
      241 taaaaaacat tggaatatca agcaattcat ttttttgcgt ggtaatgccg acaacggaag
      301 gcagctttat tttgaggcgc aaaggtcttc gatgcacacg atgcgctaga cttggcaggt
      361 caatatgggc gtgcgcagta tgttctgatg cggcggattc gcctgaaaac aagccggaac
      421 ggtcagatgc gttccggatt gtttttttgt cgggggggtg ccgccatatc aaaacaggcg
      481 ggcgatgccg tctgaaactt cgtcattccc gcgaaagcgg gaatctagaa cttttaaatt
      541 ttcagacggc ttttgaatat tgccgttgcc cgacgttctg gattcccgca acttttcgtc
      601 attcccgcga aagcgggaat ctagaacctc taaattttca gataaccttt gaatattgcc
      661 gctatcccaa ggtctggatt cccgcctgcg cgggaatgac gggtctttta taacctttga
      721 atattgccgc tatcccaagg tctggatgcc cgcttacgcg ggaaggacgg ggagggcgga
      781 tgccgtctga agcccaccta ccattatttc cgcttccata ccgcttggcg gcaatatgtc
      841 cggaatgggg cggtttatcc gaaaaagccc attttgactt ggatgagttt ttccagttcg
      901 ttcaggatgc gccggcgcga gacgaaaaag atgatgtggt cgccgtcttg gatgacggtt
      961 tcggtatggt gtcccataat ggtttcgccg gttccggcgc ggacgacggc ggcaatgtgg
     1021 cagccttcgg gccatttgat gccgctgatg cgcctgccga tgatggcgga agtttttttg
     1081 tcgccgtgtg cgacgacttc gatggcttcc gccgtgccgc gccggatggg gtggacggca
     1141 acgatgtcgc cgcgccggat gtgggcgagt atcgagccga tggtgatgag gtggggggag
     1201 acgacgatgt cgattttgtt gccttcgagc aaatcgacgt agcttgagcg gttgacgatg
     1261 ccgatgacgc gcttcgcgcc gaggtttttc gccaaaaggg cggacataat gttgctttcg
     1321 tcgtcgttgg tcagggcgca gaatacgtcg atttcgtcga tgtattcgtt gtcgagcagg
     1381 gtttcgtcgg ttgccgaacc ttgcaggacg agggtgttgt cgaggttttc ggctatccat
     1441 tcggcacggc gcggccggca ttcgatgatt ttgacgttgt atgcgtgttc gagctgcttg
     1501 gcgaggcggt agccgatgtt gccgccgccg gcaatcataa tgcggcgggt gctggtttct
     1561 ttggggcgca attcgggtat gaccgcgccg atgttttcgg cggcggcggc aaacaggatt
     1621 tcgtcgcctt cgatgatgac ggtttgcggc gcggggacga tgaggcggtt gttgcggtaa
     1681 acggcgcaga tttggcagtc ggccccgtcg ggcaaatctt gggcgatgtc ggcaatgctg
     1741 cgtccgacaa gcagtccgcc gcgccgcgcc tgtatgatga ccatccgcac gcggtcgtct
     1801 gcaaaacgta aaacctgcaa tgcgcccggg cagtctatca ggccggcaag ctgttcggta
     1861 acgagctgtt cggggctgat ggtttcggtt atgccgaata tggaaaggct gccgttttcg
     1921 ttgttttcga gcttggggct gaggtattcg aggtattcgc tggaacggac gcgcgcgatg
     1981 cggccgggga tgttgaacag gtcggcggca actttgcagg cgacgatgtt ggtttcgtcg
     2041 ctgcgggaga gcgcgagcag caagtcggca tcttccgcgc cggcgcgttc taatgtgaag
     2101 ggggatgcgc cgttgccgaa aacggtttgg acatcgaggc ggctgcctgt ttcctgcaat
     2161 gctttttcgt cgatgtcgat aacggttacg tcgttgttgg gtatggcggc aaggttttgt
     2221 gcgacggtag aacctacctg tccgttgcct aaaatgagga ttttcacggt gtgggtcgcc
     2281 gagtgatgaa atggtggatt gtaccgcaac caggggcgga aatgccgtct gaaagcagat
     2341 tttgtgttca gacggcatga cgcctcaaga tttgacgggg atgatgccga ttttcgcctg
     2401 ccattggggc ggggcggtgg cgtggatgga ttcgcctttg ctgtctacgg cgacggttac
     2461 gggcatgtct ttgacttcaa attcgtaaat ggcttccatg cccaattcgg ggaacgccaa
     2521 gactttggaa gatttgatgg cttttgccac gagatacgcc gcgccgccga ttgccatgag
     2581 gtacacggct ttgttgtcgg cgatggcttc gcaggtggcc acgccgcgct cggatttgcc
     2641 gatcatgccc aagaggtcgg tttgttcgag catttggcgg gtgaatttgt ccatgcgggt
     2701 ggctgtggtc ggacctgccg gaccgacgac ttcatcgccg accggatcga cggggccgac
     2761 gtagtaaatc aggcggttgg tgaaatcgac gggcaattct tcgcctttgt tgagcatatc
     2821 gacgaggcgt ttgtgtgcgg catcgcggcc ggtgaggatt ttgccgttca acagcaatac
     2881 gtcgccggtt ttccagcttg ccacttcttc tttggtcagc ttgtcgacat cgacgcgttt
     2941 gccgttgtcg gggctgtaag tcaaatcggg ccagtcttcg acgcgcggcg gcgtgagttc
     3001 gacagggcct gagccgtcca attcaaattc gacgtggcgg gtggcggcgc agttcggaat
     3061 catggcaatc ggtttggagg cggcgtgggt cgggtaatcg aggattttca cgtccaacac
     3121 ggtggtcaga ccgcccaagc cttgcgcgcc gatgcccagc gcgttgactt tttcaaagag
     3181 ttcgaggcgc agggcttcgg tggtggacaa ttctgcacct gacgctgctt tttcctgcaa
     3241 ctcttgaatg tcgatgtggc tcatcaagga ttcttttgcc atcaacacgg ctttttcggg
     3301 cgtgccgccg atgccgatgc ccaagatgcc gggaggacac cagcccgcgc ccatggtcgg
     3361 gatggttttc aatacccaat cgacgatgtt gtcggaagga ttgagcatgg cgagtttgga
     3421 tttgttttca gagccgccgc cttttgccgc gcaggttact tcgactttgt cgcccggcac
     3481 gatgctcata tggatgacgg cgggcgtgtt gtctttggta ttttggcgtt tgccggcggg
     3541 gtcggcgaga acggaagcgc gcagcgtatt gccttcccaa gtgtaggcgc ggcgcacgcc
     3601 ttcgttaacc atttcttcca cgctcatatc cgcatcccac tgcacatcca taccgacttt
     3661 caaaaacacg gttgcgatac cggtatcttg gcagatgggg cggttgtttt ccgcacacat
     3721 acggctgttg accaaaatct gcgtcatcgc gtctttggcg gcggggtttt cttccttctg
     3781 ccacgcttta tagagcgcgt cgatgtagtc tttgggatgg tagtagctga tgaattggaa
     3841 ggcatcgcaa atgctttgga taaagtcttc ctgtttgatg acggtcatga ttgtgttcct
     3901 tttcaaggtt gtggcggtaa gtgtctgctg ctgttttaaa caaccttttt gaaggctgtt
     3961 ttttatcagg ttgaaatagt gccagcgttt gtacggtaaa gacaatacat aattctaatc
     4021 tcttgattat caatttgttt taataaaata ctgttttact cggattttga tatttgtaat
     4081 ctttgcctgt tgctttgcgg tagggagaaa tcagcaggca gttcattgta ggccgattga
     4141 tgaacaatgc cgtctgaaag ggcttcagac ggcattgtgt tcggacgggc gggcttattt
     4201 tgcggcctgt ccgtcttctt ttgcaaaata tttggcgtaa atcttgtcgt attcgccgct
     4261 ttcgcgtact ttttccaacg catcgttcag cattttgacg gttgcttcgt cgcctttgcg
     4321 taccgcgatg ccgtagtgtt cggtggtgaa gtcgggcagg gtaacgaagt ccatcccttt
     4381 ggccggattg tttttcacat aattggcgat gaccgcgctg tcgctgacca cggaatccaa
     4441 gccgccgttt tccagttctt tgataatcag gggaacgttt tcaaagcgcg cgattttcgg
     4501 gttgtcgttg cccaagagtt tggatacgga gaaatcgccc gtgtagccgg ttaccacgcc
     4561 gactttgttc atgtttttca aatcttcgga agaagatatt tttttgcctt tcggaacgag
     4621 gacgacttgg gtgatttcaa aatacgggtc gctgaagtcc atagactgtt tgcggtcgtc
     4681 ggtaatggtt acgcccgaca tcacaacgtc cgcatcgccg ttgttcaagg cggggaaaag
     4741 gctgtcccac ggctggtgtt tgaattcgat tttaaaattg cccgccttcg ccatcgcgtt
     4801 catcaaatcc acatcgaagc cttcgacatt gcctttcgag tctaaagatt caaagggggc
     4861 aaactcggcg ttggaagcca cgcggtacac tttgtcgggg ttggcggcgg gcgcggcggc
     4921 atctttaccc tgaccgccgc aggcagacag cgcgagtgcg gaacaggcaa gggcggcggc
     4981 aatccatttt ttcatattca tcaaaattcc tttcggtaat caaaaagcct aaaaaatcag
     5041 tttaacacaa aattaacgtt ctttttcacg gaaaaacgca taagtaacgt cgtggaacaa
     5101 atccgtatgc gggctgtctt cgtagttgag ttccgccaaa gcgtcttcaa atgcaagctg
     5161 gatggactcg accgcgactt cggcggtgtc ggcgggaagg gcgtggatca gggctttgaa
     5221 ggcggtggac aggacgtggt tctgcatacg cagcacgtcg tttgcctctt ccagatattc
     5281 caaacgctgt tcgatgctgc tcatgatgta tcctcgcgaa tctgttaaaa tgcatcatta
     5341 tatcaaaccg cgctttgggc gcgggtttgt ctgcttgcaa agattaagaa ccggaagccg
     5401 aaaatggatg cgaataaaga gccgaattgg gaaaaacgtt tggaaaacct gcgtcagacg
     5461 cgccgtatga aggcagtgcc gacttacgcg ccgctgtccc gcccctctga aaccggaacg
     5521 gacgcgcctg tgccgaaact ggacgatgag agccgagccc gtgtgttaaa ggcgtatctg
     5581 caaaaatggc aggaagaaca caatgccgcc gttgccgatt gcggcgagga agtcgaaacc
     5641 gacccgatga ttgtccttca ggaaaactgg ctcaacgcgc aggcttccct gcaaatgtcg
     5701 gtttcggaaa aacacattga atcgcggcgg agaatccggt ttgatgccaa aaaagacagt
     5761 gccgaatttg aaaccggaca gattgaaggc ggggaaaacg ccgatgcggc agaatcgggt
     5821 acggcggcag acggggttgc ggaaaacggc gaaggcggtg cggaagaggc gttgatgccc
     5881 gtccaaatca atatcctgaa tccgaaagcc gtcaaccggc gcgaagtgtt ctgcctgtcc
     5941 gaacaggagc tgaccgaacg gctgatcaaa cgcctgcgcc cccatctgac cgataccgtc
     6001 aacggcatca tccgaacggc ggtgcaaaag cagatggcgg ttttcaccta tcagctccag
     6061 cagatgctgc acgagcaggc gggggcggta gtcgaagacg tgttggaaca cgatgtccgc
     6121 aaaatcctca acgacatcaa gtacgagtta aaatacaaac gctgattgcc atgccgtctg
     6181 aaagccgttt cagacggcat ttgcattctc atccgacttg aaagcctcat ggaacaggcg
     6241 caaaatatta acaaattaaa caacgggcgc acgctccgtt gccgaacgga taaaaccgag
     6301 gaatcaccga tgagcaaaaa actccatccg caaacgctcg ccatacgcgg cggcaaagaa
     6361 caaaccagat accgcgaaca caatcaggca ttgttcctga ccagcagttt catgtgggac
     6421 aacgcccaac acgctgccga tttgttttca aaaaaaatca aaggcttcac ttatacccgt
     6481 accgccaacc cgaccacagc cgcctttgaa aaacgcattg ccgctttgga aggcacggaa
     6541 cgcgcggttg ccacttcgac cggcatgtcc gcgattcagg cggcgttttt cacctttttg
     6601 caggcgggcg accatgtgat ttccagccgc agcctgttcg gcacgaccgt cggctttatc
     6661 aataacatcg ttaccaaatt cggcatcgaa gtgagccacg tgtcgccgac tgatataaac
     6721 gaatggaaag ccgccgtcaa agccaacacc aaactgctgt ttttggaaac gccgtccaat
     6781 cccttgggag aagtggccga cttggaagcc ttggcggaat tggcgcacgg catcggcgcg
     6841 attttggtgg tggacaacag cctgctgtcg cccgtcggct cgcagccttt gaaacacggc
     6901 gcggatattt ccgtttcctc cgcgaccaaa gccatagacg gacacgggcg cgtgatgggc
     6961 ggcgtgttgg cgggttcgga agagctgatg gcgcaggtcg ctatgtattg caactcttgc
     7021 gggctggcaa tgtcgccgtt taatgcgtgg cagttgttga gcggcgtgga aaccctgtcg
     7081 ctgcgtatgg aaaaacagtt cgacaacgcc ctgaaaatcg cgcaatggct gcaagcgcag
     7141 ccgcaggttc aagccgttta ctacaccgga ttgcccgacc atccgcaggc ggagcttatc
     7201 cgcaaacagc aaaacggcgg cggcatcgtc attggctttg aagtcgccga ccaagcagcc
     7261 gcgtggaaag tcgtggacgg agtggaactc ttttcccgta ccgccaacct cggcgacgtg
     7321 cgctcgacca tcacccatcc gtggacaacc acgcacggca ggatgcagcc cgaagaaaaa
     7381 ctcgccgcca acatccgccc cggattggtg cgcctgtcgg tcggtttgga atatgttggc
     7441 gatttgattg acgatttgaa acaggcactc gcgcgctgat tgcgtgtttc agacggcatt
     7501 ggacagcaga tgccgtctga aacccttatc gcgtatggca tacacatcaa caataggaaa
     7561 aaatatggat gaagcagttt ttgccgattg ggcgttgaaa atctgcctga ccggcttgat
     7621 tatttttttg ggttttatcg tttggaattt gggcaaggag tccaaagcag gcaaattcgg
     7681 catcgccatt ttgtttttgg ttttgggctt gggcgtgttc ggttttgtgt tcaaagagtt
     7741 attgattaag tttttggtat tgccgaaata ggtttgcggt ctgtcaaaat gctgtctgaa
     7801 atcataaaaa gtaatctgca ccctaaaagt ttgatttaac cgccaactga ttaaggtgcg
     7861 gatttttatg acaaaataaa aatcatcttt ccgcagtcat tcccacggac gcgaaagtct
     7921 gtctttttga atcccggata attttacatc gtcattcccg cgcaggcggg aatccagatc
     7981 attgggtagc ggcaatgttc aaaagtcgtc tgaaaaatca gaagttctag attcccgttt
     8041 ttacgggaat gacggaattt cagacggcat cctcccaccc cgtcattccc gcgcaggcgg
     8101 gaatctagtc cgttcggttt cggtcattta cgataaattc ctgttgcttt tcatttctgg
     8161 attcccactt ccgtgggaat gatggaggag cggataaatt ctcgcaatct aaaaccttgt
     8221 catttccata aaaaacagca acccgaaaca gcaacttaaa aacagcaacc tgaaacctcg
     8281 tcattcccgc gcaggtggga atccagatca ttgggtggcg gcaatgttca aaagtcgtct
     8341 gaaaaatcag aagttctaga ttcccgtttt cacgggaatg acggaatttc agacggcatc
     8401 tgcccgcccc gtcattcccg cgtaggcggg aatctagtcc gttcggtttc agtcatttac
     8461 gataaattcc tgttgccttt catttctaga ttcccacttc cgtgggaatg acggtttgga
     8521 agttgcctga aactcgaaaa caactatagt ggtttaaatt taaaccacta taaaactgaa
     8581 tgaatcggat tcccacttct gtgggaatga caaactttaa ggtgtgatga cttatccaaa
     8641 acagtcgaaa cgcaaaaacc ggtttctcgt ttgcataaga acggcaaatt tttcggtgtc
     8701 ttgttttatg ggcgttatcc cttgtccgtc ccgtagggca ggtaaacgtc gaagcgggtg
     8761 cttttgccgg tgtattggta ggcaggggct tgtccggcaa ggtgttcgcc gaggcggggg
     8821 cgtttgacga cgacgcgttt ttttgctgtt tggcgtgcgg tatgcaggag tgccgcttca
     8881 tcttgcgctt cgccgacgag ccgatggaag taggtcattt cttttttaac ggcggcactt
     8941 ttgcggcgtt cgggatacat ggggtcgaga tagacgatgt cgggtttgcc ttgtgtttga
     9001 acaagggcgg gcatttgttc ggcggcgttg ccgaaatgga ggttgatgtg cgcggcggtg
     9061 tcttgcgttt cgggattgag gagggcgcgg cggatgccgt ctgaaagcag gcaggcgacg
     9121 gcgggatgtt gctcgaaggc ggtaacggcc agcccgagcg aggcgaggac gaagctgtcg
     9181 cgccccaatc ctgcggttgc gtcccaaacg gtggggtgcg cggtgtggtt gacggctttg
     9241 gcgatgagtt cgcccccgcc ttttgtgcgc cggtattgtg ccgcgccgga ggcaaaatcg
     9301 acgatgacgc tgcttttttc cccgacaagc ctgaggctga cggtatcgtg ttcggcaagg
     9361 aggtaactgc cttgttcggg cggttgggaa acgggcacaa gggggaatgc ccgtatcagg
     9421 gcgcggacgg cttcggtggc ggtgttgtca ataaggatgt cggtcatggt gttttgtgtc
     9481 cgttcgggcg tggggcgaac ccgctttccc gtgccgtttc agacggcatt ttttcgggtg
     9541 ggcggagatg gtgcggatgc cgttttgtcg tcagccgatg ttgaggcgtt ccatacggta
     9601 gcgcatggaa cggaagctga tgcccaagcg tttggcggcc tgcgtgcggt tgccttcggt
     9661 ttgtttgagg gtttgttcga tgatgtcgcg ttcgatttgg tcgagatagt cctgtatctg
     9721 catggtatcg gggtcgaacg cgccgcaacg cagggcttcc tgtgcctgat cggcattgcc
     9781 gaaggcggtg atgacggcaa ccggcgtatc gagcaggcgg ctgttgatgt gttggacgac
     9841 ttcgagcccc gagccgtccg gcatacgcat atcggtcagg acgagcgaat agcgttggct
     9901 gtcgagcttg tttttggctt cggcaacgcc tgacgcggta tggacgcgca agcccatttt
     9961 catcagggtc atttccatca ggtcgagaat gtcggtttcg tcatcgacga cgaggacggg
    10021 gtgttgcagt tcagtcattg gttttttccg gtaatgtgag ttcgaaacat ttggcttccg
    10081 gtaggtaggt caaatcgccg aaattggcgt gcgccagttc gcgggcgaca tacagcccga
    10141 ggccggtgcc gttttccgcc gtggtgtaaa agggttcgaa caggtgttcc tgcacttcgg
    10201 gcggtcggca aagaggatac agacggtgtt tttttgcgcg gggcggatgg tgacggaaat
    10261 cgagccgggc tgtttgcggc tgtgccgcca cgcgttgttg gcgaggttcc acataatttg
    10321 ccgcaggtgg gcaggatcga aataggcagt caggtgattg ccctgcatat ctaggcggat
    10381 gcagccggcg gcatcgggat ggccgagcag gaactcttgt ttgaattctt cccaaaacgg
    10441 tatcaggccg atggtttcgc gttcggtttt gttgcgcttg ttgagcgagg aaatatcttc
    10501 gagcattttg tcgatacggc agacgttgcc gtcgatgatt ttgcacaatt tggcgttgaa
    10561 cggatctgcc gcccccgctt ccatattttc gcgcaacagg tcgtttgcat ggcggatggc
    10621 ggacatgggg ttgcggattt cgtgggcgat gttggcggtc agttgtccga gcgcggcaag
    10681 tttgacggac agggcttctg cctgaatttc gctttgcggg cggatgtaga ggatgagcag
    10741 cttgttctgc tctttgttca tcggcacggc gcggatgcgg gcggtcaggg cgggcgtgtc
    10801 gatattgcgt tcgaaagtac gcgaaggggc cttgtcccat aaaacggtaa tagggtcgaa
    10861 cagggcggta tgctgtccga tttcaagcgt ggggagcaga tcttttgcct ttttattgaa
    10921 cagtacggtc tgatactcga cgttgatgat gacgaccgct tcctgaacgc ggttgagcac
    10981 gatttggttc aagcccctga tgcggcggta ggcggcgtgg ttttcatggg caagtttgcc
    11041 ggcacggtcg atgtatctga ccgacagcga ggcaatcatg gcgacgaaat aggagccggt
    11101 cacgaggacg aaggtgttgg tgacggtttt tgcatccaaa atcagcggat acatattgat
    11161 attgctgtct gcaagggcat tcaatatcag caggatggcg gcgtagctgg catagagcag
    11221 ggggtaacgc ccgtaactga gcaggcagga gctgcccacg aagggcagga tcaggatgcc
    11281 gaaccccgag ttgatgccgc cgaacaggta ggtcagtatg ccaatcatgg taatgtcgga
    11341 cacggcgctg aaactcggta tcttcaaagc ctgccattgc caatgcggat ggatgatgga
    11401 aaagaaaatc agccagcagg caatggcgag ccaaacataa aacgcccacg ccgtccacga
    11461 agcgtgcagg ttcgcacggc tgccggtttc cagcccgagg atgtgcataa tcatcagcgg
    11521 aaaaacgatg gcgacgcgga tgatgttgat cagattggga atccggtctt tgagtttttc
    11581 aagttcgcgg gggttggaaa tcaccataat tatgtgtgga atcgggttta tttgggggaa
    11641 gaaagctgtt tcaggctgcc cgatatgggt aatagtttgc cttttttgcc gcgttttgcc
    11701 tcaagcaggg agacggggat gcggtctttg tgcgccgcgc cgcgcctgcc ttcgctttca
    11761 atcaggattt ccggctcgga agaaacggcg gtatgcgtca gcgattcgcc ggcgtttaat
    11821 ccgatgattt gcagcccttt gcctttcgcc ataattttca attcgccgat ggggaaggcg
    11881 agggcgcggt tttgactggt ggcggcaatg attttgcagt cggggttgat gaacgaggag
    11941 gcatagacgg caatcggcgg caggacggtt tcgccactgt ctgtggtcat caccactttg
    12001 cccgctttta cgcgtccgac catatcagcc aacttggcga tgaagccgta gccgccgctg
    12061 cttgataata aataatgttg ttccggcaat cctgtcaaca tcgcaacggg tttcgcgccg
    12121 ttttgcaact cgatcaagga tgaaaccggc acgccgtcgc cgcgtccgcc gggaatttcg
    12181 gcggcatcga gtgtataggt tctgcccaat gaatcgagga tgacgacggg taaaaccgtt
    12241 ctgccttcaa gggtttgttt gaggcggtcg ccttctttga acgcggtttg gctcaaatcg
    12301 agattgtgtc cggcacggct gcgtatccag cctttttccg acagaatcag tgtgatgggt
    12361 tcgtcggcgg tggtttgtgt cagcacggcg cgtccggcct cttccaccag cgtgcggcgt
    12421 gcatcgccgt attgtttcat atccgcctgc atctctttga taatcagctt gcgcttttcg
    12481 ttttcatcgc ccaaaaggat gttcagacgg ccttgttctt cgcgcaattc gttcaattct
    12541 ttttcgagtt tgaaaccttc caaacgtgcc aactggcgca ggcggatttc caaaatgtct
    12601 tcggcttgga tttcggtcag cccgaacgcc gccatcaaat cggctttcgg gtcatctgat
    12661 tcgcggatga ctttaatcac ttcgtcgatg tgcagaaaga ctttcagacg gccttcgagg
    12721 atgtgcagcc gtttttccac ttggttcaaa cggaatttca gacggcgtgt tacggttacg
    12781 gtgcggaaat ccagccattc ctgcaaaatc gttttcaggt ttttctgcgc ggggcggttg
    12841 tccagcccca tcatcaccaa gttcatggac acattgcctt ccagcgaagt ttgcgccatc
    12901 agcgtgttga tgaaggtatc ggtatcgatg cggctggatt tcggttcgaa caccagtcgc
    12961 acgggatgtt cgccgtcgga ctcgtcgcgc acgcggtcga ttaaatccag catcagcttt
    13021 ttggtattga gctggtcttg gttgagctgt ttcttacccg ctttcggttt cgggttggtt
    13081 tgctcttcga tttcggcaag gattttggcg gaattggcgt tcggcggcag ctcggttacg
    13141 atgacgcgcc actgtccgcg cgccaatttt tcgatttcat aacgcgcacg cacgcgcacg
    13201 ctgcccttgc cggtttcata aatccggcgc aattcgtccg ccggcgtgat gatttgaccg
    13261 ccgccggcaa aatcgggggc aggaatatat tgcatcaggt cggcggtttc cagcgtcggc
    13321 tttttcaaca acgcaatcgc cgcctgcgtc acttcgttca aattgtgcgg cggaatctcg
    13381 gtcgccatgc ccaccgcaat gcctgacgcg ccgttgagca acaccatagg caggcgggcg
    13441 ggcaggtgca gcggttcgtc aaacgcgccg tcgtagttcg gcacaaaatc caccgtcccc
    13501 tgattgattt cggacaacag caattccgca atcggcgtca gccgcgcttc ggtgtaacgc
    13561 atcgccgccg ccccgtcgcc gtcgcgcgag ccgaagttgc cgatgccgtc gattaaggga
    13621 tagcgcaagg taaaatcctg cgccatccgc accatcgcct cataggcgga actgtcgccg
    13681 tgcgggtggt atttacccaa aatctcgccg accacgcgcg ccgatttcac cggcttcgcc
    13741 cccgccgtca aacccatatc gcgcatggca aacaaaatgc gccgctgcac gggcttctgg
    13801 ccgtctgaaa cttcaggcag cgcgcggcct ttgaccacgc tcatggcgta ttcgagatag
    13861 gcgcgttcgg cgtatcggcc gagcatcagc gtattggaat cggtatgtgg ggcgtgcgct
    13921 tgcgtattca ttgtgtatgc ggaatgtaaa gcaaaggaca ttattgtaaa tcaaaacggc
    13981 aaaccatagt gggcgcgtgt ctgaatctga atcaaatacg ggaaatgtga aaatatgtta
    14041 taaataaggc tttcccactt tcacacattg gagacgatat ggaactggta tttatccgcc
    14101 acggacaaag cgaatggaac gcgaaaaacc tgtttacagg ctggcgcgac gtgaagctga
    14161 gcgagcaggg gcttgccgag gctgccgccg ccggtaaaaa actgaaagaa aacggctatg
    14221 agttcgacat cgccttcaca tccgtcctga cccgcgcgat taagacctgc aacatcgttt
    14281 tggaagaatc cgaccaactg ttcgtaccgc aaatcaaaac atggcggctg aacgaacgcc
    14341 actacggcca actgcaaggt ctggacaaaa aacaaaccgc cgaacaatac ggcgacgagc
    14401 aagtccgcat ctggcggcgc agctacgaca ccctgccgcc gcttttggac aaagacgatg
    14461 agttttccgc acacaaagac cgccgctatg cccatctgcc tgccgatgtc gtacccgacg
    14521 gcgaaaacct gaaagtaacg ctggagcgcg tattaccgtt ttgggaagac caaatcgccc
    14581 ccgcgatttt gagcggcaaa cgcgtcttgg tggcggcgca cggcaactcc ctgcgcgcgc
    14641 tggcaaaaca catcgagggc atttccgaca aagacatcat gggcttggaa atcccgaccg
    14701 gtcagccgtt ggtgtacaaa ttggacgaca atttgaaagt catcgaaaaa ttctacctgt
    14761 aagggtgtga aataaaaaat gccgtctgaa tcccagcgtt tcagacggca tttttgacaa
    14821 ggcggcaaaa cgcatcagct gcgtaccaag aaacgccccg tcgctatccg gtgcagcgta
    14881 ccgacaagca gcagcgccac gcctgccgat ccggcggtgg caagcgtcag ccccaagccc
    14941 gacaatacgc cggaagccgc cagatgcaga ccgcatcctg ccattgccgc gaaaccgaat
    15001 gaaaatcccc aaaagctcat cgtaaaacca ccttcccaaa accagcgggt caggcgcagc
    15061 aagaacaaaa gctgcaggca gccgtagccg attaatgcca acgcaaaacc gtcgacttta
    15121 ccgccgacgg caaaatacgc gccgcagccg acaaaggcgg gcgcaagctg gatgccgacc
    15181 acgccacgcg ccgccgtgcc gaccggtgcc gccgtgcgca gcctgcccaa gatggaggct
    15241 tccaagctca gccaggaaaa catacccgcg ccgaaaaaca aagctgcata atcatgatgc
    15301 cccaacgccg ccagagatga cgcgctgaca aagtttgtcg caaccgtagg cagataaata
    15361 atcggcgtcg tcgcctccaa ggaatgcagg ccgcgccaca gaccggccgc ccgatacatc
    15421 gaaaacgcca actgtccggc aacgccgaca taaatcagga ctgccgccgc gcctgcctga
    15481 tagggcttca gcgcgagtcc ctccagcata gcggtaatcg gaatcgcgct gatgaagcag
    15541 cattgcacca agtcgcgcaa atcagacaaa aaatcgtttc ggtacgcaaa tattttgatc
    15601 aggtatgccg ccaccagcaa gagccagaca accgaagccg ccgcaagcag tgattcggcg
    15661 gccaaggcgg gcagcagccc gacagacgcg ccgtaacgcc acgacagccc caaggcaaac
    15721 aagcccagcg cgatgctgaa atagctcaaa ggaatcggaa atttcttaga tgcagacata
    15781 aacacccttc agacggcatg ccgtcgtaac gcacagatat agtg
//
LOCUS       DAXHRP010000032        15782 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.032, whole genome shotgun sequence.
ACCESSION   DAXHRP010000032 DAXHRP010000000
VERSION     DAXHRP010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15782
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.032"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(24..644)
                     /gene="galE"
                     /locus_tag="ACFM72_000750"
                     /pseudo
     CDS             complement(24..644)
                     /gene="galE"
                     /locus_tag="ACFM72_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(723..1067)
                     /locus_tag="ACFM72_000751"
     CDS             complement(723..1067)
                     /locus_tag="ACFM72_000751"
                     /inference="COORDINATES: protein motif:HMM:NF014177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFC6257350.1"
                     /translation="MNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGGPHAGFMSQRYAEK
                     FYFHDEYQQLDL"
     gene            complement(1060..1254)
                     /locus_tag="ACFM72_000752"
     CDS             complement(1060..1254)
                     /locus_tag="ACFM72_000752"
                     /inference="COORDINATES: protein motif:HMM:NF012372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC6257351.1"
                     /translation="MRKVFHYEQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNA
                     VPPLLAKAIAESILKMSENE"
     gene            complement(1232..2062)
                     /locus_tag="ACFM72_000753"
     CDS             complement(1232..2062)
                     /locus_tag="ACFM72_000753"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC6257352.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKTSRLYYRRYAQSFSL
                     "
     gene            complement(2093..4366)
                     /locus_tag="ACFM72_000754"
     CDS             complement(2093..4366)
                     /locus_tag="ACFM72_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HFC6257353.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(4431..5081)
                     /locus_tag="ACFM72_000755"
     CDS             complement(4431..5081)
                     /locus_tag="ACFM72_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC6257354.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(5078..5875)
                     /locus_tag="ACFM72_000756"
     CDS             complement(5078..5875)
                     /locus_tag="ACFM72_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC6257355.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(5875..7038)
                     /gene="ctrB"
                     /locus_tag="ACFM72_000757"
     CDS             complement(5875..7038)
                     /gene="ctrB"
                     /locus_tag="ACFM72_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HFC6257356.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(7053..8228)
                     /gene="ctrA"
                     /locus_tag="ACFM72_000758"
     CDS             complement(7053..8228)
                     /gene="ctrA"
                     /locus_tag="ACFM72_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HFC6257357.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            8363..9496
                     /gene="neuC"
                     /locus_tag="ACFM72_000759"
     CDS             8363..9496
                     /gene="neuC"
                     /locus_tag="ACFM72_000759"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0006047 - UDP-N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HFC6257358.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTYKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGAAVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            9500..10186
                     /gene="neuA"
                     /locus_tag="ACFM72_000760"
     CDS             9500..10186
                     /gene="neuA"
                     /locus_tag="ACFM72_000760"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HFC6257359.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNRKES"
     gene            10187..11236
                     /gene="siaC"
                     /locus_tag="ACFM72_000761"
     CDS             10187..11236
                     /gene="siaC"
                     /locus_tag="ACFM72_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HFC6257360.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIE"
     gene            11320..12807
                     /locus_tag="ACFM72_000762"
     CDS             11320..12807
                     /locus_tag="ACFM72_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,8-polysialyltransferase family protein"
                     /protein_id="HFC6257361.1"
                     /translation="MLKKIKKALFQPKKFFQDSMWLTTSPFYLTPPRNNLFVISNLGQ
                     LNQVQSLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNIT
                     PKKLLYIYRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAP
                     LLESFSYHPTKLERYLIGNNLNIKGYIDHFDILHVPFPEYAKKIFNAKKYNRFFAHAG
                     GISINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIK
                     LHPKEMGNNYVMSLFLNMVEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYT
                     PLLSPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNP
                     LFKTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLLGHKALWYYNALYNVKQ
                     IYKMEYSDIFYIDNISVDFHSKDKLTWEKIKHYYYSADNRIGRDR"
     gene            complement(13303..14463)
                     /locus_tag="ACFM72_000763"
     CDS             complement(13303..14463)
                     /locus_tag="ACFM72_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HFC6257362.1"
                     /translation="MKKVLLIASYDSFLNSGYAVAKEIKDAQIDIYIHKSRENILSNR
                     QLLESGIDKDQAIFFFHIDDYFIKNMHQYYDAVILSVGNGLLKRFFKQNAQLNIASRP
                     LIITLFPGVVFGDQASILSRMGADIVLYNNKHDFRIAETYKKQYKLSCQNILYGYPNF
                     RHASKGCHGERIYFIDQVKIPFKKEERIYTLKKLITLAEKYPEKEFTILLRVADKDIT
                     VHQDKHSYIELAKQFQLPSNLTIERKSTAQAFQEMGYCLSYSSTMLFEAECKGIPVGV
                     VADLGFSKSYANQHFLGSGVLVYFDQIDFTSPKIADPDWLDCYATKKVITTDEFNKLL
                     KQVVPLQHDYQEYLSAVNSIESTKTIFLRKFKKLIRDPKKFFYDSKWLRKVI"
     gene            14640..15659
                     /gene="galE"
                     /locus_tag="ACFM72_000764"
     CDS             14640..15659
                     /gene="galE"
                     /locus_tag="ACFM72_000764"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HFC6257363.1"
                     /translation="MKKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPR
                     LKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNV
                     SGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI
                     LTDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAV
                     FGDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRA
                     FEAASGLTIPYEVKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRWVSNNP
                     NGYDD"
BASE COUNT         4582 a         3610 c         3170 g         4420 t
ORIGIN      
        1 gtttttttgt ttgcggtttg catttaatcc ccatatccgt tggggttgcg gctgacccaa
       61 cgccacgaat cttccatcat ttgctgcaag ccgcgtttgg tttcccagcc ggtttgttgt
      121 ttggtatggg acgggtcggc aaaggaacac gccaagtctc cggcgcgtcg gggttggatt
      181 tgatagggaa tatttaagcc ggatgcggct tcaaaggcac ggatgatttc caaaacggaa
      241 taggcgcgcc ccgaacccaa gttgaacaaa tgtacgccgg caacgccgcc ttttgccttc
      301 attgccgcga tatgcccttc tgccaaatcc atcacatgaa tgtagtcgcg cattcccgta
      361 ccgtcggggg tcggataatc gccgccgaat accgacagtt gcggcagcct gcccgaagcc
      421 acttggcaga tatagggcaa aaggttgttg ggaataccgt tgggctgttc gccgatcaag
      481 ccgctttcgt gcgccccaat cgggttgaaa tagcgcaaca aaatcacgct ccaacgcgga
      541 tcggcctttt ggatgtcggt taacatccgt tccaccatcg ctttggatgc gccataagga
      601 ttagcggtat cgcccgggcg catatcttcc gtatagggca ttttacgtat catggcgcga
      661 cgcattaaag taaacgccaa agcgcgttta tactggttat ccagtttccc tatattttta
      721 cgttacaaat caagttgttg gtattcatcg tgaaaataga atttttcggc ataacgctga
      781 ctcataaaac cggcatgcgg gccgcctgaa aaaatcattg cgacatcatc gtcatttaat
      841 gtttcatggt tgttttctat taatgctaaa gcaatttggt aattaattgc caaaatatcg
      901 ttagtaatca cacgatagcc gcgttttttg gcttcgtagg caaaggaaca gcctccacta
      961 aatacatctg caactgtatc tacatcagac ggaagctggt cacaaatcca ggaagctatt
     1021 ttctctttat taccgatata gttaattttc ggatattgct tattcatttt cactcatttt
     1081 taaaatactt tcagcaatag cttttgccaa taaaggcggt acggcgttac caacctgctg
     1141 ctgctgggca attttgctgc cgcaaaaaat aaaattatca gggaaagatt gtaaggcagc
     1201 taattcacga acggttaacg cccgattctg ttcatagtga aaaactttgc gcatatctcc
     1261 tgtaatacaa acggctggtt ttgttgctgt tgtaacggat gtatttacgg atatcacctg
     1321 ttttcggacg taatggttca ggaatatcgt tacggttacc tccattttta acaaatgcca
     1381 ttttttctaa catttgtgcc gaatgattca tagcttcatg atttgcaacg tgtggattgc
     1441 tttcgccagc agccagtttt ggaaaatgtc ctattgctga tccaacagtc tgatgggaaa
     1501 tctgcaaagg ttcgggaaag gaaattttgc ctttatccct cctcccgata aatatcactc
     1561 ggctacgtat ctgaggaaca ccgaaatcgg ctgcactcag tatcttacat tccaccgaat
     1621 aaccgatatt ctgaaatgct tgaataatct caatacgtgt tttacctgaa ttgtgtgtat
     1681 agagtcgcgc tacattttcc ataacaaaaa aatatggttg gacaatttta actattcgga
     1741 caaactcttt aaataaatgg ttgcgtgggt catctgtaaa tgtccgtcca atctttcctg
     1801 ccatactaaa accttgacaa ggtggtcctc caataatcaa atcaactgct tgtccgttaa
     1861 gacaattgat taaatcttgt tcggttagtg tggttaaatc tttttgcagt aattgatgat
     1921 gggggaagtt ggtacggtaa gtctgacaat aatcagactc catttcaaca gaaagcaatt
     1981 gttggaatcc ggcttgttca aaacccaagg ataggcctcc tgctcctgag aaaaggtcaa
     2041 tataggtaag tggtgtgtgc ataagtcaaa atccataaac tcttcgatta ttttaccgct
     2101 tcagcttcgc aaacgcatcc gccatcgccg aattggctgg ggcgcggtcg ttgcgttggg
     2161 gtttgcggcc ggctgtccgt tcgcggctgc ggttttcaga cggcatttta tgttttgcgc
     2221 cgcccggttc gtcatccaag cgcatggtca gcgcgatgcg tttgcgtgca gcatcgactt
     2281 ccagcacttt cactttcacc acgtcgccag ctttcaccac ttcgcgcggg tcttggacga
     2341 acttgttgga cagggcggag atgtgcacca agccgtcctg atggacgccg atgtccacga
     2401 acgcgccgaa gttggcgacg ttggaaacca cgccttcgag tatcataccg acttgcaagt
     2461 cgctgatttc gtggatacct tcggcaaacg atgccgtctg aaactcgccg cgcggatcac
     2521 ggccgggttt ttccagttcg gacaggatgt ccaaaatggt cggcaggccg aagcgttcgt
     2581 cggtgaagtc ggacgctttg atttgcttca cgcgctcgcg gttgccgatg agttcggcgg
     2641 cgctaatgcc ttgttgcgcc agcattttgg cgacgacggg ataggcttcg gggtggacgg
     2701 cgctcgcgtc caacggctct ttgccgccgt taatccgcaa aaagcccgcc gcctgctcga
     2761 aggttttttc gcccaaacgc ggtactttca gcaatttttt gcggctgtcg aacgcgccgt
     2821 tttcatcgcg gtaggcgaca atgttttggg caagggtttg attcaaaccg gaaattcgcg
     2881 ccaagagcgg ggcggaggcg gtgttcacgt ccacgccgac ggcgttcacg cagtcttcga
     2941 ccaccgcgtc cagcgatttg gcgagctggc tttggttcac gtcgtgctga tactgcccca
     3001 cgccgatgga tttggggtcg attttgacca actcggcaag cgggtcttgt agcctgcggg
     3061 cgatggacac cgcgccgcgc agggaaacgt ccaagtcggg gaactcgcgc gccgccagtt
     3121 cggacgcgga ataaatcgac gcgccggctt cggacacgac gattttatgc agccccattt
     3181 tcgacatttc acgcaccagt tcgcccgcga ttttgtcggt ttcacggctg gcggtgccgt
     3241 taccgatggc gatgagcttc acgccgtgct gtttaatcag gcgcgacagc gttgccaaca
     3301 tattgttttc ttgatgcaaa tagacgatga cggtatccag cagcttgccg gtgtcgtcca
     3361 ccacggcgca tttcacgccg ttgcggtagc cggggtcgag acccagcgtg gtcagccgtc
     3421 cggcgggcgc agcaagcagc aagtctttga gattgcgggc gaacacggta atcgcgtcgg
     3481 tgtcggcggc ttctttcaaa cgattgagag cttcaagttc caacgacaaa aagattttcg
     3541 cgcgccaagt caggcgcacg gtgtcgcgca gccatttgtg gccgtctgaa actttgaagc
     3601 ggcgggcgat gatttgctcg tattcgcttt gctgcgtaat cggcgtgtcg tcgggctgat
     3661 atttgagcgc gatgttcaac acgccttcgt tgcgtccgcg caaaaccgct agcgcacgat
     3721 ggctgggcat cgcacgaata ggttcgcggt ggtcgaaata atcgctgaat ttttcgcctt
     3781 cggtttcttt gcctccaaca acttgcgcgt ggatttcggc ttcgttccac agcttgtcgc
     3841 gcagcgtgcc gatgagttcc gcgtcttcgg caaactgctc catcagaatc gcacgcgcgc
     3901 cgtccaacgc ggctttggca tcggggacgt tttcgttcag gtagccttgt gcggcggctt
     3961 ccacgtcctg cgactgctcg gcaagcaaca cgtccgccag cggctgcaaa ccgtgttcgc
     4021 gcgcgatttg cgctttggtg cggcgtttgg gtttgtaggg cagatacagg tcttccagcg
     4081 cggttttgtt atcggcggct tcgatttgcg ccctgaggtc gtctgaaagc ttgccttgct
     4141 cttcaatgct ttttaaaaca acggctttgc gctcttccaa ctcgcgcagg tattgcagcc
     4201 gctcggcaag ccggcgcagc tgcgtatcgt ccaacccgcc cgtggcttcc ttgcggtagc
     4261 gggcgataaa gggcacggtt gcgccgtcgt ccaaaagctc gatagcggca ttgatttgcg
     4321 cggtagtcgc ggaaagttct tgggaaagaa tttgagtaat gttcatcaat aaaattccaa
     4381 cggacaggcc gtctgaaatt tcagacggcc tgatttaaaa aacaatcgct ttaaggtagc
     4441 gaattataat attcgtaggc tttgtccata tcttcaaact ggtgcatatg ccctttttcc
     4501 agcaccatcg cattatcgca atattgcttc atggcgctgt ggctgtgcga caccaagatg
     4561 atggaacggt ctttgcgctt ttcaaacaac tcgtacttac atttatcggc aaagcgcgag
     4621 tcgccaactg caatcacttc gtcaatcaga tagcaatcaa actctaccgc caacgacaaa
     4681 gcaaatgcca aacgcgcctt catacctgaa gaataacgct tgaccggctc gtaaagatat
     4741 tgccccaact cggaaaactc ttcggtaaag ttcttcacat aatcgatatc gacattgtaa
     4801 atccggcaga tgaaacgcaa attgtccata ccggtcagac tgccttgaaa cgcaccggag
     4861 aatgccaaag gccaagaaat actcattgtc cgcttgattt cacccgtggt cggcggctca
     4921 acgccactga tcaaacggat gagcgtcgat ttacctgcac cgttgcggcc gagaataccg
     4981 attttctcgc ccttctccat tttgaagcta atatcgtgca agactgtccg ccaaccttgg
     5041 cgggtcagat agcgtttgga aacgtgttca actgaaatca ttgcggctcg actcctttac
     5101 tgaatttact gaccatcgcc aagccaaaca acaacaacac cagattgcac aatacgatat
     5161 accaaggatt ttcataggta attacatcgc tgccaaaata tccggcacgg aacatttctg
     5221 tgccatgcac catcggaatc attaatgcat attcttgtac cttgggcggc aaattatgca
     5281 caaaaaagaa cgcaccggat aacggcatca tcacaaaagt caatgtgccc caaatcttgc
     5341 caaacggctc gaaattaaag gcaatcgaac aaatcaccaa acccaaacca atcgcaaaaa
     5401 aagccatcaa aagccaagcc atcagcatat aaaacatatc tgccggcatt tcaatccagc
     5461 caatcgcaat caataccgcc ataatcacaa tctgcgcaat ggttgcacca gcaatttcca
     5521 aaatcatgcg cgccaagatg gtatccaaaa ctcttacatt gcggtgataa agcaagctgg
     5581 catttgaaga aatcgaccca actgcccgtt ttgaggcatt acgccacatc atcaacatcg
     5641 gatagccagt aatcgcaaat gcgacaatat tcaaagttga atatcggtct gcccttaaaa
     5701 atttccacat caagacgata acgaatgtca tcagcaacgg ctcaacaaac agccataaaa
     5761 agccaatatt attgcgaccg taacgggtga taatttcccg catcaacagc gcaccgatta
     5821 cgcgcctttg aatggctaaa gattcccaaa atgatgtttt atgcaaggct ttcatcagtt
     5881 tttatgctca cgaatgctgg cagtcaacag gctcaaaata ccataaacca tcaagccgat
     5941 aatcagagtg gcaacaatgt tgtataaccg tttaggctca tgtgccaaat ccggcaggct
     6001 cggttgcgag atcacttcca aataaagctg ctgacggtct gcttcaacct tggcactttc
     6061 caaagaagtc atggcggctg ccaactgctg ctctgccaac tggttttcca aatacacacg
     6121 ctgatattcg gcagcctgat tagacaacga agaatgccca ccgcccgaaa tggcacgtaa
     6181 ctgttggtca atttctttac gcaagctctg ctcacgcgcc tgcaaacccg gaatctgcgg
     6241 attctccgga gtgactgctt tcacctgatc cagctgggtt tgaatcacaa tcaattcatc
     6301 ttgcagcttg gaaaccaacc ccatttgcac ttccgattgc gctttcaaat caaaaacgcc
     6361 attggcaatc cggtaatccg tcagattctg agaggcttcc tttacccgct ctgccgccgt
     6421 tttcactact tcttccgcat agcgcaccgt atcagcacgt gcacgatcgt tcaactggtt
     6481 aatcaatgct tcaccttgtt ttaacaaagc ctcattgatt ttcttagatt ccagcgcatc
     6541 aaaggaagtt acattcaacg tggaaatacc cgaaaccgta tcaaaattga tcatcacctg
     6601 atttttatag tattgataaa aagcctcttc ctcgccacgg aacccaaacc cattaaagcg
     6661 gctgaacgca tcacctttgg tttcataaaa ctcacgcacc ggcaagattt tacgcagttc
     6721 atccaaagac gagcgcgaac gcatatactc cccaaccgtg taaatatcat cttgcgcacg
     6781 ggcaaaacct gtgccctgca aaatggcacc caggccattg agagaagatt ggcttttagg
     6841 cgagcgcacc acaaagctcg attgcgacgt aaaacgatcg gaagcgaaga agccgaaata
     6901 caccaacgaa attaccgtag ggataatcac cgttacccaa aataaagggc ttagcttttt
     6961 aatccaactt ttctttttcg gctttttacg ctcggctttg gtttcagtgg caactgccac
     7021 aggaagttgc tcagacatct taattactca cattaattag ttaaattatt aatactgttc
     7081 gcgccactgg taaccggcga gaacacaaac gacaaaaatt tctgcacttc agccaacggc
     7141 gcattcgaca catacaatac atctttattc ttcacaggaa agcgctgcat agaaaatagc
     7201 gaatgcgcat cagccatatt cacacgatat accgttggaa tctctgcctc actgccataa
     7261 ccttgagcaa tccatttatc ctgacgttct gccggcaatt ccaccaatgg cgtatagcgg
     7321 aacacaaaca caccacgcgc atcagaacgg cgatcttgca aaccgcccat acggccaatg
     7381 gcttcagaaa gcgataagcc tctggctgaa aaaccgattt cttgtgttct ccccaccgca
     7441 cccatagacg taaaggtata gggattggta atcatggtaa ccacatcacc gcgacgcagc
     7501 aaaatatttt gtcgcggatt tgcaactaaa tcttccaagg caacagttcg tactacattg
     7561 ccacgtgtca gctgcacatt cgtatcctgc acatttgccg ttgaaccacc taccgcagcc
     7621 accgcatcca acacacgctc accggctgcc gtcagcggca tacgcacact attcccagca
     7681 cgaatcaccg acacattcgc cgcattattc tgcaccaaac gcaccatcac ttgtggctga
     7741 ttggccattt ttttcaggcg gcctttaata atttcctgaa cctgaccagg cgttttaccg
     7801 accaccgaaa tatcgccaac aaacggcaca gaaaccgtac cacgtgccgt gaccaactgc
     7861 tctggcaact tagtttgatg cgcactaccc gagcccatcg aagaaaggcc accaccaaac
     7921 aatactgccg gcggcgcttc ccaaatcata atatccaata catcaccaat atttagcgta
     7981 ccagccgaag cataaccatc gccaaactga gtgaatgact gatttatctg agccttatat
     8041 aataactgag caaccgtatg attcacatca atcagctcca cttcaggaat ttgaacttca
     8101 gattgttgcc ctaaagagac aatttttttt gcgctggggc ctgatgaagg aatcgcagag
     8161 catcctacaa ttaaacttcc acacaataat aatactgcgt gacgaatata aaatttcact
     8221 ttaaacacaa gccaaatcct aatataatta taaatggcct aattatagca cttaatcgaa
     8281 ataaatttat gagtacgtag agtataatta gtattcttct ttccaacttc cttatactta
     8341 tatacttata gattctaaaa tcatgaaaag aattctttgc attacaggta ccagagccga
     8401 cttcggcaag ctaaaacctt tattagccta tattgaaaat cacccagacc ttgaattgca
     8461 tttgattgta actggtatgc atatgatgaa aacatatggc agaacctaca aggaagtaac
     8521 tcgagaaaac tatcaacata catatctgtt ttcaaatcaa atccaaggtg aaccaatggg
     8581 tgccgtttta ggcaatacca ttacgtttat ctctcgtcta tctgatgaaa ttgaacctga
     8641 tatggtcatg attcacggcg accgtttaga agcactagca ggcgcagctg taggtgcatt
     8701 aagcagccgt ttagtttgcc atatcgaagg tggtgaacta tctggtacag tagatgactc
     8761 cattcgtcat tctattagta aactttctca tatccacttg gtagcaaatg aacaagctgt
     8821 cactcgccta gtgcaaatgg gagaaaaaag aaagcatatt cacatcatcg gctcccccga
     8881 tttagatgtt atggcctctt ccaccctccc atccttagaa gaagtcaaag aatattacgg
     8941 tttaccatac gaaaattatg gtatttctat gtttcacccc gtgactacag aagcacattt
     9001 aatgccacaa tatgcggccc aatatttcaa agcattagaa ttaagtggcc aaaatatcat
     9061 tagcatctac cctaataatg acactggcac tgaaagtatt ctgcaagaat tattaaaata
     9121 tcaatctgat aaatttattg catttccttc cattcgattt gaatattttt tagtcttatt
     9181 gaaacatgct aaatttatgg tcggcaactc aagtgcaggt attagagaag ctcctctcta
     9241 cggtgtccct tcaattgatg ttggtacacg ccaaagtaac cgccatatgg gaaaatctat
     9301 tattcataca gattatgaaa ctaaaaatat ctttgatgcg attcaacaag catgcagttt
     9361 aggcaaattt gaagcagatg atacctttaa tggcggagat actcgcacca gcacagaaag
     9421 atttgctgaa gtaatcaaca atcctgaaac gtggaatgtt tctgctcaaa aacgttttat
     9481 cgatttgaat ctttaaatta tggaaaaaca aaatattgcg gttatacttg cgcgccaaaa
     9541 ctccaaagga ttgccattaa aaaatctccg gaaaatgaat ggcatatcat tacttggtca
     9601 tacaattaat gctgctatat catcaaagtg ttttgaccgc ataattgttt cgactgatgg
     9661 cgggttaatt gcagaagaag ctaaaaattt cggtgtcgaa gtcgtcctac gccctgcaga
     9721 gctggcctcc gatacagcca gctctatttc aggtgtaata catgctttag aaacaattgg
     9781 cagtaattcc ggcacagtaa ccctattaca accaaccagt ccattacgca caggggctca
     9841 tattcgtgaa gctttttctc tatttgatga gaaaataaaa ggatccgttg tctctgcatg
     9901 cccaatggag catcatccac taaaaaccct gcttcaaatc aataatggcg aatatgcccc
     9961 catgcgccat ctaagcgatt tggagcagcc tcgccaacaa ttacctcaag catttaggcc
    10021 taatggtgca atttacatta atgatactgc ttcactaatt gcaaataatt gtttttttat
    10081 cgccccaacc aaactttata ttatgtctca tcaagactct atcgatattg atactgagct
    10141 tgatttacaa caggcagaaa acattcttaa tcgcaaggaa agctaaatgc aaaacaacaa
    10201 cgaatttaaa attggtaatc gttcagtagg ttacaaccac gaaccattga ttatctgtga
    10261 aatcggcatc aatcatgaag gctctttaaa aacagctttt gaaatggttg atgctgccta
    10321 taatgcaggc gctgaagttg ttaaacatca aacacacatc gttgaagacg aaatgtctga
    10381 tgaggccaaa caagtcattc caggcaatgc agatgtctct atttatgaaa ttatggaacg
    10441 ttgcgccctg aatgaagaag atgagattaa attaaaagaa tacgtagaga gtaagggtat
    10501 gatttttatc agtactcctt tctctcgtgc agctgcttta cgattacaac gtatggatat
    10561 tccagcatat aaaatcggct ctggcgaatg taataactac ccattaatta aactggtggc
    10621 ctcttttggt aagcctatta ttctctctac cggcatgaat tctattgaaa gcatcaaaaa
    10681 gtcggtagaa attattcgag aagcaggggt accttatgct ttgcttcact gtaccaacat
    10741 ctacccaacc ccttacgaag atgttcgatt gggtggtatg aacgatttat ctgaagcctt
    10801 tccagacgca atcattggcc tgtctgacca taccttagat aactatgctt gcttaggagc
    10861 agtagcttta ggcggttcga ttttagagcg tcactttact gaccgcatgg atcgcccagg
    10921 tccggatatt gtatgctcta tgaatccgga tacttttaaa gagctcaagc aaggcgctca
    10981 tgctttaaaa ttggcacgcg gcggcaaaaa agacacgatt atcgcgggag aaaagccaac
    11041 taaagatttc gcctttgcat ctgtcgtagc agataaagac attaaaaaag gagaactgtt
    11101 gtccggagat aacctatggg ttaaacgccc aggcaatgga gacttcagcg tcaacgaata
    11161 tgaaacatta tttggtaagg tcgctgcttg caatattcgc aaaggtgctc aaatcaaaaa
    11221 aactgatatt gaataatgct tattaactta gttactttat taacagagga ttggctatta
    11281 catatagcta attctcatta atttttaaga gatacaataa tgctaaagaa aataaaaaaa
    11341 gctctttttc agcctaaaaa gttttttcaa gattcaatgt ggttgacaac atctccattt
    11401 tatcttaccc ccccacgtaa caatttattt gtcatatcta atttaggtca gcttaaccaa
    11461 gtccaaagcc taattaaaat acaaaaatta accaataatt tactagtaat tttatatact
    11521 tctaaaaact taaaaatgcc taagttagtt catcaatcag ctaacaagaa tctatttgaa
    11581 tctatttatc tatttgagct tcctagaagc cctaataata taactcctaa aaaattactt
    11641 tatatttata gaagttacaa aaaaatcctt aatattatac agcctgctca tctctatatg
    11701 ctgtctttta caggccacta ctcctatctg attagtattg caaaaaaaaa gaatattacg
    11761 actcatttaa ttgatgaagg gactggaaca tatgctcctt tattagaatc attttcatat
    11821 catccaacaa aattagaacg ttatttgatt ggaaataatc ttaatattaa aggatatata
    11881 gatcattttg acatattgca tgtccccttt cctgaatatg ctaaaaaaat atttaatgca
    11941 aaaaaatata accggttttt tgcgcatgct ggaggaataa gcattaataa taacattgca
    12001 aacttacaga aaaaatatca aatatctaaa aatgactata tttttgttag tcaacgctac
    12061 cccatttcag atgatttgta ttataagagt atagtagaaa tcttaaacag cataagttta
    12121 caaattaaag gaaagatatt tattaaacta cacccaaaag agatgggcaa caactatgta
    12181 atgtctttat ttctaaatat ggtagaaata aaccctcggc tggtagttat taatgaacct
    12241 ccttttctaa ttgagcccct aatatactta acaaatccta aaggaattat aggcctggcc
    12301 tctagttctt taatttatac accattactc tcaccctcaa cccaatgtct ttctattgga
    12361 gagttaatta ttaacttaat tcaaaaatat tcaatggtgg aaaacactga aatgatccaa
    12421 gaacacttag agattattaa gaaatttaat tttattaata tactaaatga tttaaatggg
    12481 gtaataagta accctctctt taaaacagaa gaaacatttg aaacacttct taaatctgca
    12541 gaattcgcat ataaatctaa aaactacttt caggctattt tttactggca acttgccagc
    12601 aaaaacaata ttaccttatt agggcataaa gcattatggt actacaatgc actttataat
    12661 gtaaaacaaa tttataagat ggaatattca gatatttttt atatcgataa tatctccgta
    12721 gactttcata gtaaagataa attgacatgg gaaaaaatta aacattatta ctattccgcc
    12781 gacaatagaa ttggtagaga tagataaaaa tactatgact tctgatctcc atacgtatgc
    12841 ttgttttcaa aaagcagcat taagatagat aagtgaagct tgatgagagc catttttgtg
    12901 gtcatcgcca aggtacacgc ggagagtaat cgacaacaga gctgctgtat tctggctttt
    12961 aaagcccagt agtaaagttt ataaggctgc atttctcaat gtaaaacgcg atattttcac
    13021 ccattattag ggataagtag ccagtggttt acactggcta ctttcatagt tatgaagtac
    13081 tgggtctgag tgaattcaat tatttccgta taaaacacag tagacatttt actaatcggc
    13141 aaaattatat tagaagaatt gagaactact gaagtcaggt aagataccat tttgcacaaa
    13201 tttaacggca tccctaaaaa gcattttggg tggtatttaa aggagtacaa aatggtttta
    13261 actacagtat gcttagaaat ctatagcctt acgcgcttta tattaaatca cctttctcaa
    13321 ccatttagaa tcataaaaaa actttttagg atccctaatt aactttttaa attttcttaa
    13381 aaaaatagtt ttagttgatt ctatactatt caccgcagat aaatattctt ggtaatcatg
    13441 ttgcaatggc acaacctgct ttaatagctt attaaactca tcagttgtaa tcaccttttt
    13501 agtagcatag caatcaagcc aatccggatc tgctattttt ggggaagtga aatctatttg
    13561 atcaaaataa actaaaaccc cactacctaa aaaatgctga tttgcatagg atttagaaaa
    13621 gcctaagtct gcaacaacac caacagggat acccttacat tcagcttcaa aaagcatagt
    13681 agatgaataa gataaacaat accccatttc ttggaaggct tgcgcggtac tttttcgctc
    13741 tattgtcaaa ttactcggca actgaaactg ctttgccagc tctatatacg aatgtttatc
    13801 ctgatgcaca gtaatatctt tatctgcaac ccttagcaaa atagtaaatt ctttctcagg
    13861 gtatttttca gccaaggtaa tcaatttttt taatgtgtaa attctttctt cttttttaaa
    13921 tggaattttg acttggtcaa taaaataaat tctctctcca tgacaacctt tcgaagcatg
    13981 gcgaaaattt ggataaccat aaagtatatt ttgacaactt aatttatatt gttttttata
    14041 tgtctctgca attctaaaat catgcttatt attatataaa acaatatcag cccccatacg
    14101 agatagaata cttgcctgat caccgaatac tacacctgga aacaaggtaa taatcaatgg
    14161 ccttgaagca atatttaatt gcgcattctg cttaaagaac ctttttaaca acccatttcc
    14221 aaccgataaa attactgcgt cataatattg atgcatattc ttaataaagt aatcatcaat
    14281 atgaaaaaaa aaaattgctt ggtctttatc tatccctgat tctaataact gtcgatttga
    14341 aagaatgttt tctcgacttt tgtggatata aatatcaatt tgagcatctt ttatctcttt
    14401 tgcaacagca tagcccgagt taaggaacga gtcataactg gcaattagta atactttttt
    14461 cactattttc ccttaattct acaccatatg aataaaatta tagtatttta ccttagatat
    14521 caaatatact taaccaaaaa aatctgaaga aatctactgc tacttcaggg ataattattt
    14581 cattaagatt ttacaaccat tattatcaat ctatcaaagt atttttagta ttttattcta
    14641 tgaaaaaaat tctcgttacc ggcggcaccg gttttatcgg ctcgcatacc gttgtttctt
    14701 tgctgaaaag cggccatcaa gtcgtgattt tggataacct atgcaattcc agcatcaata
    14761 tcctgccacg cttgaaaacg attaccggcc aagagattcc gttttatcaa ggcgatatcc
    14821 gcgatcgtga gattttgcgc cgtatttttg cggaaaaccg cattgattcg gtgattcatt
    14881 ttgccggctt gaaagcggtg ggtgaaagtg tggccgagcc gatgaaatat tatgataata
    14941 atgtttccgg cagcttggtg ttggcggaag aaatggcgcg tgcgggcgtg tttagcattg
    15001 tgttcagttc ttcggcgacg gtttatggcg atccgggcaa agtgccttat accgaggata
    15061 tgccactggg cgataccacc agcccttacg gcacatcgaa atcaatggtt gagcgcattc
    15121 tcactgacat tcaaaaagcc gatccgcgct ggagcatgat tttgttgcgt tatttcaatc
    15181 caattggcgc gcatgaaagc ggcttgattg gcgagcagcc aaacggtatc ccaaataatt
    15241 tgttgcctta tatctgccaa gtggcggcag gcaaactgcc gcaattagcg gtattcggcg
    15301 atgactaccc tacccctgat ggcacgggta tgcgcgacta tattcatgtg atggacttgg
    15361 ctgaaggcca tgtcgccgcc atgcaggcga aaagcaatgt agcaggcacg catttgttga
    15421 acttaggctc cggccgcgct tcttcggtgt tggaaatcat ccgcgcattt gaagcagctt
    15481 cgggtttgac gattccgtat gaagtcaaac cgcgccgtgc cggtgatttg gcgtgcttct
    15541 atgccgaccc ttcctataca aaggcgcaaa tcggctggca aacccagcgt gatttaaccc
    15601 aaatgatgga agactcatgg cgctgggtga gtaataatcc gaatggctac gacgattaag
    15661 ttgacctgat acaggccgtc tgaaagagat gttttcagac ggcctcttta tctgaaaaac
    15721 acacattctg tctgctataa tctgtttata ttttttggct atcctctgaa atttatgaga
    15781 aa
//
LOCUS       DAXHRP010000033        15224 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.033, whole genome shotgun sequence.
ACCESSION   DAXHRP010000033 DAXHRP010000000
VERSION     DAXHRP010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.033"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..104)
                     /locus_tag="ACFM72_000765"
     CDS             complement(<1..104)
                     /locus_tag="ACFM72_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFC6257364.1"
                     /translation="MNTNQPAVYDPLTRALHWLTVAGFIGILTTIVLWT"
     gene            381..1535
                     /gene="obgE"
                     /locus_tag="ACFM72_000766"
     CDS             381..1535
                     /gene="obgE"
                     /locus_tag="ACFM72_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HFC6257365.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     ETVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETANPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQARTAAFLEAVGWDYPKPDDRFQFDTETPRLFQISALTHQ
                     GTQELVHQINQYLIEKKRIEAEKAEAERAATNVEIAEQQPKTDTGVFKPE"
     gene            1618..2667
                     /locus_tag="ACFM72_000767"
     CDS             1618..2667
                     /locus_tag="ACFM72_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HFC6257366.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3355..4776
                     /gene="cysS"
                     /locus_tag="ACFM72_000768"
     CDS             3355..4776
                     /gene="cysS"
                     /locus_tag="ACFM72_000768"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HFC6257367.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAAFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4859..5638
                     /locus_tag="ACFM72_000769"
     CDS             4859..5638
                     /locus_tag="ACFM72_000769"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC6257368.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            5625..5969
                     /locus_tag="ACFM72_000770"
     CDS             5625..5969
                     /locus_tag="ACFM72_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257369.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            5980..6510
                     /locus_tag="ACFM72_000771"
     CDS             5980..6510
                     /locus_tag="ACFM72_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC6257370.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6603..7718)
                     /gene="asd"
                     /locus_tag="ACFM72_000772"
     CDS             complement(6603..7718)
                     /gene="asd"
                     /locus_tag="ACFM72_000772"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HFC6257371.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHS
                     QALTLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLEMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            7894..8475
                     /locus_tag="ACFM72_000773"
     CDS             7894..8475
                     /locus_tag="ACFM72_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC6257372.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(8537..9391)
                     /gene="folD"
                     /locus_tag="ACFM72_000774"
     CDS             complement(8537..9391)
                     /gene="folD"
                     /locus_tag="ACFM72_000774"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HFC6257373.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            9614..9691
                     /locus_tag="ACFM72_000775"
     tRNA            9614..9691
                     /locus_tag="ACFM72_000775"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9649..9651,aa:Pro,seq:tgg)
     gene            9716..9792
                     /locus_tag="ACFM72_000776"
     tRNA            9716..9792
                     /locus_tag="ACFM72_000776"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9750..9752,aa:Arg,seq:tct)
     gene            9820..9895
                     /locus_tag="ACFM72_000777"
     tRNA            9820..9895
                     /locus_tag="ACFM72_000777"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9853..9855,aa:His,seq:gtg)
     gene            10031..10537
                     /locus_tag="ACFM72_000778"
     CDS             10031..10537
                     /locus_tag="ACFM72_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HFC6257374.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            10534..12312
                     /locus_tag="ACFM72_000779"
     CDS             10534..12312
                     /locus_tag="ACFM72_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HFC6257375.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLKTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            12425..13249
                     /locus_tag="ACFM72_000780"
     CDS             12425..13249
                     /locus_tag="ACFM72_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HFC6257376.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(14011..14799)
                     /locus_tag="ACFM72_000781"
     CDS             complement(14011..14799)
                     /locus_tag="ACFM72_000781"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HFC6257377.1"
                     /translation="MLTLYGETFLSRLLLGTAAYPTPEILKQSVRIAQPAMITVSLRR
                     TGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDVGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(15013..15207)
                     /gene="thiS"
                     /locus_tag="ACFM72_000782"
     CDS             complement(15013..15207)
                     /gene="thiS"
                     /locus_tag="ACFM72_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HFC6257378.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFVPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         3649 a         3869 c         4214 g         3492 t
ORIGIN      
        1 gtccacagga caatggtggt cagaatgccg atgaaaccgg caacggtcag ccagtgcagc
       61 gcgcgtgtca acgggtcgta aacggcaggt tggtttgtgt tcataaaaaa cttattatat
      121 gtaacggttt gaacggacat tccgtcgggt cggaatgtca aaaaggcgcg attgtaccaa
      181 agaagttgga cataattttg tttgcaggct gaagatttgc ttaaaaattc attaagatgg
      241 gcggaacaaa tagtttgggt acggcgtgtt gaaataccgc ttatccctta taatagcgtc
      301 cgaaattctg ttcggacggc atcaaaacac acggtaatcc gtctgaaccc ccatttgaaa
      361 ccaacaaaca agagcattga atgaaattca tcgacgaagc aaaaatcgaa gtcgccgcag
      421 gcaaaggcgg taatggcgca accagtttcc gccgcgaaaa attcgtaccc cgcggcggcc
      481 ctgacggcgg cgacggcggc aaaggcggca gcgtttgggc agaagccgac gaaaacacca
      541 acaccctcgt cgaataccgc ttcgtcaaac gctaccaagc caaaaacggc gaaaaaggtc
      601 atggttccga ccgttacggc gcaggtgcgg acgacatcgt cctcaaaatg cccgtcggca
      661 cccttatccg cgacctcgac accgatgaaa ccgttgccga cctcacctac cacggacagc
      721 gcgtctgcct cgccaaaggc ggcaaaggcg gcttgggcaa catccacttc aaatcctccg
      781 tcaaccgcgc acccaaacaa tccacacccg gcgaagaagg cgaaacccgc tccctgcaac
      841 tcgagcttaa agtccttgcc gatgtcggct tattgggtat gcccaacgcc ggcaaatcca
      901 ccctgattac cgccgtctcc gccgcccgcc ccaaaattgc caactatccc tttaccaccc
      961 tgcatccgaa cttgggcgtg gtacgcatcg acgaaaacca cagcttcgtg atggcggata
     1021 ttcccggcct gattgaaggc gcggcagaag gcgcgggttt ggggcatcgt ttcctcaaac
     1081 acttatcgcg caccggatta ttgctgcatg tcgtcgattt ggcacccttc gacgaaaccg
     1141 ccaaccccgc cgaagaagcc ctcgccatca tcaacgaatt acgcaaatac gacgaagaac
     1201 tctacggcaa accgcgctgg ctggtgctga acaaactcga tatgctcgac gaagaagaag
     1261 cccaagcacg caccgccgcc ttcctcgaag ccgtcggctg ggattacccc aaacccgacg
     1321 accgcttcca attcgacacg gaaaccccgc gcctcttcca aatcagcgca ctgacccacc
     1381 aaggcacgca ggaattggta caccaaatca accaatacct gatcgagaaa aaacgtatcg
     1441 aagctgaaaa agcggaggcg gagcgggcag cgacaaatgt tgagattgcc gagcaacagc
     1501 ctaaaacgga tacgggcgtg tttaagccgg agtgaaaaaa gaaagggttt cagacgatat
     1561 ttgttctaca aaaggttgtt tgaaacaatt ttaaagcaag attgaaatgg attaaaaatg
     1621 tcatctaacc aatatatcca gtcgcttgag ttgacaaact ttaccgttct tccaaacgat
     1681 acttttgaat tttctgaaaa tctcaatgtt attgttgccg aaaacggttg tggcaaaaca
     1741 catttgttaa aaattttata cagcctgcta gaagtaacat ctaacaccaa aaacagatta
     1801 ctgaaaacag aattgcaaaa aagttttgcc gataaattac tgaatgtttt ccgtcccgat
     1861 tccttgggca ggttgagcaa acgtttgcag gggcgcgggc gtacggaaat cgttttaaaa
     1921 ctgcaaaacg gcactacgca tagtagtctg aatttttcca gtaactcatc atcgcaagtc
     1981 aatgttcaaa gcatcggatt gaaagaaaat gaatatactc cgacacctat cttcttaccc
     2041 agccgcgaat taattacact ttgcccttgg ttcacttctt tgtatcaaaa ccaaagcatc
     2101 cctttcgaag aaacttggtt tgatacctgt atgcaattaa atcacccgct tgccaaaggc
     2161 cccagagaaa caaaaattcg agaattgctc gaacctattg agaacgcgat gggaggaaaa
     2221 gtatctgaag aacaaggaag gttttatcta tcgctgacaa atacgggcgg taagattgaa
     2281 gcacctttgg tagcagaggg tttgcggaaa tttgtcatga ttgcccggtt aatcgcaaca
     2341 ggggcattgc tggataaagg ctatctattt tgggatgaac cggaagctaa tctgaatcct
     2401 aaattgatca aagtggctgc ccgtattatt tggtctttat ctcaacaggg tattcaggtt
     2461 tttattgcaa cacactctct attcttattg agagaattgg aacttttgaa gcttgaaaat
     2521 aacacggatt tacctgtacg ttttttctcg ttgattgctt ccgatgatgg aacaaaagtg
     2581 gagcaaggga acagtattaa tgatttgaac acattgatat tgttagatga aaacattatg
     2641 caggcagaca ggtatctgaa tatttgaggt taagctatga ctacaatcac agaaaagaga
     2701 ttaacctttg cttttcctga agattattac gttaccaagt atgacgaatg ggaacattat
     2761 aaaatttttc agaacagttg taatttacgt aataaaattg atacaaatga aaagggaaag
     2821 aacgggataa atcaaagtgt agatgacgat aatggcagct caggtgtaga tataatagcc
     2881 cttcatgagt cgacactttg gctaatcgaa attaaagatt attaccgact tgggcttgag
     2941 ccaaatgccc aatcaataga tgaaaaactt tctgacctac catatttaat cgcaagaaaa
     3001 attcgagatt cattggcagg attggtttct gctaaattta aagcagaaaa acaggaagaa
     3061 aaagattttt ctcgcttggc tttagattgt aacgaaataa aaatagtcct tcatattgaa
     3121 atgcctagta taagaagtaa actttatccc tcgtcatcag atttagcaaa cttattaaaa
     3181 gataagttta aattatcaga atttacaaaa aattttgcaa actgttatgc agaaccaatt
     3241 ttcacaaata tcagccatat taataatccg caactacgta atgttccttg gtccgtatct
     3301 acaggaacag aacagaaatt atcatccgag caacaaagat taatccataa tcccatgacc
     3361 accatctaca acacccttac ccgccaaaaa gaaccctttg cccccatcga ccctaaaaac
     3421 gtgcgtatgt acgtttgcgg catgactgtt tacgactatt gccacttagg ccatgcccgt
     3481 gtgatggtgg tgtttgacat gattgcccgc tggttgcgcg agtgcggtta tccgctcact
     3541 tatgtgcgca acatcaccga catcgacgac aaaatcattg cccgcgcggc tgaaaacggc
     3601 gagactatcg gcgaactgac cgcgcgtttc attcaggcta tgcacgaaga tgccgatgct
     3661 ttgggtgtgt tgcgtcccga tatcgagccg aaggcgacgg aaaacatccc gcaaatgatt
     3721 gccatgattg aaaccctgat tcaaaacggc aaggcatatc ctgccgcaaa tggcgacgtt
     3781 tactacgccg tgcgcgagtt tgccgcttac ggacaactgt cgggcaaatc gttggacgac
     3841 ctgcgcgcgg gcgaacgcgt ggaagtggac ggtttcaaac gcgatccgct tgattttgta
     3901 ttgtggaaag cggcgaaagc aggcgaaccg gcgtgggaaa gcccgtgggg caacggccgt
     3961 ccgggttggc acattgaatg ctctgccatg agtgaaaacc tgttcggcga tacgttcgac
     4021 attcacggcg gcggcgcgga tttgcagttc cctcatcatg aaaatgaaat cgcccaaagc
     4081 gtcggcgcga cggggcatac ctgcggtcat catcacgcgc aaacccacca cgggcaaagc
     4141 atcgccagcc acgtcaaata ttggctgcac aacggcttta tccgcgtgga cggcgaaaaa
     4201 atgtccaaat cactgggcaa cttcttcacc atccgcgaag tgttgaaaca atacgacccc
     4261 gaagtcgtgc gcttcttcat cctgcgcgcc cactaccgca gcccgttgaa ctattccgac
     4321 gcgcatttgg acgacgcgaa aggcgcgttg acccgtctat acaccacctt gaaaaacacg
     4381 cctgccgccg cgtttgattt gtctgaaaac gccaacgact acacccgccg cttctacgcc
     4441 gccatgaatg acgatttcgg cacggtcgaa gcggttgccg tgctgttcga actggcagga
     4501 gaagtgaaca aaaccaatga cgcacagctc gccggctgcc tgaaagcctt gggcggcatc
     4561 atcggcctgc tgcaacgcga cccgaccgag ttcctgcaag gcagcgcagc ttcagacggc
     4621 ctctccaacg aagaaatcga agacttgatc gcccggcgga aacaggcgcg cgccgataaa
     4681 aactgggcgg aatccgaccg catccgcgac cttctgaacg aacacaaaat cattttggaa
     4741 gacaacgccg gcggcacgac ttggcggcgc ggttaaaatc catcgaaaag ggtaaatgtg
     4801 ccgcattttg cccttttttg ttcagacggc atttttattg tgagaactta tttttattat
     4861 gcttaaaatc atttccgcca acgtcaacgg catccgctcc gcctacaaaa aaggttttta
     4921 cgaatacatc gccgcatcgg gcgcggacat tgtctgcgtg caggaactca aagcgcagga
     4981 ggctgatttg tctgccgata tgaaaaatcc gcacgggatg cacggtcatt ggcattgcgc
     5041 cgagaagcgc ggttacagcg gcgtggcggt gtacagcaaa cgcaaacccg acaatgtgca
     5101 aatcggtatg ggcattgaag aattcgacag ggaagggcgg tttgtgcgtt gcgatttcga
     5161 caggttgagc gttatttcgc tttacttgcc cagcggcagc agcgcggaag aacgccagca
     5221 ggtgaaatac cgtttccttg atgcgtttta ccctatgctc gaagcgatga aaaacgaagg
     5281 acgcgacatt gtcgtttgcg gcgactggaa catcgcccac caaaacatcg acctgaaaaa
     5341 ctggaaaggc aatcagaaaa attcgggctt cctaccggaa gaacgcgagt ggataggcaa
     5401 ggttatccac aagctcggtt ggacggatat gtggcgcacg ctttatcccg atgtgccggg
     5461 ctacacgtgg tggagcaacc gcgggcaggc gtatgcgaaa gatgtcgggt ggcgcatcga
     5521 ttatcagatg gttacgcccg aacttgccgc caaagccgtg tccgcacacg tttataaaga
     5581 tgaaaaattt tccgaccatg cgccgctggt catggagtat gactatgctg ccgaataaag
     5641 ttttgggtaa atatgattgg aatgtggacg gaaaaacagg aataggcgca gcatgggttg
     5701 tcgctgcgtt tatcctgccc atattggtgt gggcgatatt tatgttgtcg cggatgcaag
     5761 gctggcttgc gccgaccaag gcaaacccga catgggcgtt ggtgtggctg ctgatctgca
     5821 tgccctgcct gctgattgcg tccaaatgtt tgggttggaa aggctggcgg cgggtggtga
     5881 atatttttgc ctgcctgacc gtctgcgcca tattgagcgt acccgcttcg ctgctcatcg
     5941 cctttaccct ccgggacctg ctgaaatagg cggggcggta tgcagggttt tgaactcgaa
     6001 gatttgacgc tttggctgat acgcgatgcc ggagaggatc agatgtggat agaccgttgg
     6061 gcgatcagtt atcccgtcgt gcagatgtcc gaagcgtcgg ccggtcaaag cataggggaa
     6121 tggcaggcag ggcttcggac ggcatttgaa cgcatacgtg gcaaatacgt cgccgttgtc
     6181 gcacacggtg cgggcgcggc cgcatttttg gcgtggctgt atcaggcaga catcctgaca
     6241 cggaagaaaa ttgccaacat catccttgta ccgcagcgtc ccgatatttt tcccgacgat
     6301 gcggaacaca ctttccaacg cgtccgctgt ccctgccgtg ccgcattggt tgtacccgaa
     6361 cacggcggcg tgccgcacgg ttgggcgcaa aaacaggcgg atttgtggaa cgcccgcctg
     6421 ttggtttccc cgcattcggg cagtttgaac ggcatgctcg gcggctggca gtggggtatg
     6481 aagctgatgc aggaaatgtt gctggcgtga acgcttgcct tatcggaatt tcggttaact
     6541 ggggttgcaa ggaaaatgcc gtctgaaaca ggcttcagac ggcatttcca ttcaaacagg
     6601 gcttacaggc tgcccaacac gatacgcagc acgcggcgca acggctcggc agccccccac
     6661 aagagttggt cgccgacagt gaacgcgctg atgtattcgc cgcccatctc cagtttgcgg
     6721 atacggccga caggaacaga cagtgtgccg gtaactttgg caggagtcag ctcgtgtatg
     6781 ctggcttctt tttcgttagg gatgactttc acccagtcgt ttgcacctgc caaaatcgct
     6841 tcgatttcgg aaacaggcag gtcttttttc agcttcaggg tgagggcttg gctgtggcag
     6901 cgcatagagc cgatgcgtac gcataagccg tcgattacgg tcggattgtc gctgcggccg
     6961 aggattttgt tggtttccac accgcctttc cattcttctt tagattgacc gttgcccaaa
     7021 tccacgtcaa tccacggaat caggctgccg gcgagcggta cgccgaagtt ggctttcgga
     7081 tagtcttcgc tgcgcaggaa atcggatact ttgcggtcga tgtcgagaat cgagccggca
     7141 ggatcggcaa gttcgtctgc cacttgggcg tgaaccgcgc ccataccgct gatgagttcg
     7201 cgcatgtttt tcgcacctgc gccggaagcg gcttggtagg tcatgctggt tgcccattcg
     7261 accaaatcgt tttggaacag gccgcccaaa gccatcagca tcagggagac ggtgcagttg
     7321 ccgccgatgt agtttttcac gccgtttttg aggccgttgt cgatgacgtt gcggttgacc
     7381 gggtcgagga cgataatcgc atcgtctttc atgcgcaggg atgacgccgc gtcaacccag
     7441 tagccgttcc agccgctgtc gcgcaggggt tggaagacgg atttggtgta atcgccgccc
     7501 tgacaggtaa cgatgatgtc catttttgcc aattcggcaa catcgttggc atccaacaat
     7561 gttttggctg cctgaccgaa atcaggggct gcgccgccga cgttggaagt ggtaaagaaa
     7621 aacgcttcag gaatgtgggc gaagtcgttt tcttctttca tacgctgcat caaaaccgaa
     7681 ccgaccatac cgcgccagcc gacgaaacct actttcattg tgttgctcct tgaggaaaaa
     7741 tcgttaataa aattatgtat ggcgtaaagg aagcgtttta acgccgtatt gggaaaatgt
     7801 aaagttcttt atcgggattt ctttaagtat tggcgttttc ggtgtcgtgg cggtagaatc
     7861 ggggtcagtt aagaacaatt atcaggaacg gatatggaag aaaaaaacga ctacaccgac
     7921 gcggcatccg acaaccgcaa cgggcaggaa attgaagtcg gaattgccgg cgcaggcgac
     7981 cggatacttg ccgcgctgct gaaccaattg tttacctttt tggttttgtt ggtgccgttt
     8041 gccggactga ttgctttcgc catcaagaat gaaggcagga ttggcggcag tgaggaaata
     8101 ttcgggctgc ttttgggcat gacttccttt tgggtaggac tggcgggcat tttggtttat
     8161 accgtcgttc aaatctacta tatgagtcgg gacgggcagt cattgggtaa gaaaatcatg
     8221 agaatcaggg tgttgaaaac cgacggccgc aatcccggtt ttgtcggcac ggttttggta
     8281 cgcgaaatcg catggtcggt tttggttgcc attattgccg ccgttatcgg tcttgcagta
     8341 ggtgacaacg gagaaaacgc catcaacctg ctggcattcc ttgccaactt tgtcctgctc
     8401 tttatggtca aacgcgaccg ccgcacgctt tacgacatac tggcggatac ggttgtcgtc
     8461 aagctgccca aataaacgga cacggcaaaa tgccgtctga aagcctttca gacggcattt
     8521 ttatcttcag aaccgctcaa gcatcgtgca gtgaagccgc gtgcagggtg ttttccatca
     8581 atgtggcaat cgtcatcgga cccacgccgc cgggaacggg cgtaatcatc gccgcccgtt
     8641 cttttgccgt ttcaaattcc acgtcgccgc acaggctgcc gtcgtccaaa cggttgatgc
     8701 ccacatcaat aacgaccgcg ccaggtttga tccattcgcc tttgacaaag ttcggaatgc
     8761 ctacgccgac caccaaaata tcggctccgg caacctcgtc tgtcagattt tcggttgcgc
     8821 tgtggcagac cgttaccgtt gcgcgcgcca gcagcagttc caaagcctgc gggcggccga
     8881 cgatattcga cgcgccgacc acgaccgctt ttttcccctt cggatcaatg ccgtaagctt
     8941 ccaaaagcgt catcacgccc ttgggcgtac acgggcgcat cagcggcatt ttgaccgcca
     9001 gcctgccgac attgtaagga tggaagccgt ccacgtcctt atccggcgaa atacgttcca
     9061 aaaccgcctg gctgtcgagg tgcttcggca gcggcagctg aaccagaata ccgtccactt
     9121 cggaatcggc attcaggcgg tcgaccagtg ccagcagttc ttcctgcgat gttgattcgg
     9181 gcagttcgta agacagtgat ttgatgccgc atttttggca ggcagttttc ttgttgcgga
     9241 cataaaccgc gctggcaggg tcgcctccga ccaaaaccac ggccaggcaa ggcatgtgca
     9301 gattgtcctg ttggcgttgc gccaccgctt cggcaaccgc ctgcaggcgt ttttgcgaaa
     9361 cttctttacc attgatcagt tgtgccgaca tatccgtcct tttgttaaac aggtagaaaa
     9421 tgctgaaaat tatcgcattt tccgtttgtt tttacagcag gatgccgaaa ataaatttgc
     9481 cctgaaataa aatacggctg tttggacgga ttaaatattt tttcaaatca aaaaactata
     9541 tttttcatct tggtgtcttg aaaataaata ttgacgcatc tttccctgag ttgtatagtt
     9601 cgcttcttca agtcggggcg tagcgcagcc cggttagcgc atctgctttg ggagcagagg
     9661 gtcgtgagtt cgaatcccac cgccccgacc aatcaatcag cacgaatcgg catgagcgcc
     9721 cgtagctcaa ccggatagag caccgacctt ctaagtcggg ggttacaggt tcgattcctg
     9781 tcgggcgtgc caagaatttg attgaaaacc gtttttatgg tggctgtagc tcagttggta
     9841 gagccccgga ttgtgattcc ggttgtcgtg ggttcgagcc ccatcagcca ccccagataa
     9901 aggcccgtac ttttcggtac gggtcttttc ccgtttgcgc gtactgtccg cgccgccggc
     9961 tttgcctttc gcatatgctt ctgtatcatg tgggtttttc tgtcttttat ggtttttgtc
    10021 ggaggctttg atggttgacg cttggtctgt ccctgatttt gaatcgaaaa tctgtccgcc
    10081 cgaggcgttg gcggcgcgtt tggcgttgtt gccgcgcccg ctggtgttta ccaacggctg
    10141 tttcgacatc ctccacaggg ggcatgttac ttatctggcg caggcgcgtt cgatgggggg
    10201 cgcgttggtg ctggcgttga ataccgatgc ttcggtgcgg cgtttgggca agggcggcga
    10261 ccgcccgatt aatcctttgg agaaccgtgc cgccgttgcc gccgcgttgg aaagtgtgga
    10321 tttggtaacg tggtttgacg gggatacgcc ggcggcgttg attgaggcgg tcaaacctga
    10381 aattttggtc aagggcggcg attgggctgc ggataagatt gtcggtgcgg cagaaacgtt
    10441 ggcgcgcggc ggtcaggtgt tttcaattcc gtttctgcac cagacttcga caacgaagac
    10501 tttggcaaaa atccgtgcgg cagagggcgg aaaatgacgg ttttgaagcc ttcgcactgg
    10561 cgggtgttgg cggagcttgc cgacggtttg ccgcaacacg tctcgcaact ggcgcgtatg
    10621 gcggatatga agccgcagca gctcaacggt ttttggcagc agatgccggc gcacatacgc
    10681 gggctgttgc gccaacacga cggctattgg cggctggtgc gcccattggc ggttttcgat
    10741 gccgaaggtt tgcgcgagct gggggaaagg tcgggttttc agacggcatt gaagcacgag
    10801 tgcgcgtcca gcaacgacga gatactggaa ttggcgcgga ttgcgccgga caaggcgcac
    10861 aaaaccatat gtgtgaccca cctgcaaagt aagggcaggg ggcggcaggg gcggaagtgg
    10921 tcgcaccgtt tgggcgagtg tctgatgttc agttttggct gggtgtttga ccggccgcag
    10981 tatgagttgg gttcgctgtc gcctgttgcg gcagtggcgt gccggcgcgc cttgtcgcgt
    11041 ttgggtttga aaacgcaaat caagtggcca aacgatttgg tcgtcggacg cgacaaattg
    11101 ggcggcattc tgattgaaac ggtcaggacg ggcggcaaaa cggttgccgt ggtcggtatc
    11161 ggcatcaatt tcgtgctgcc caaggaagtg gaaaacgccg cttccgtgca atcgctgttt
    11221 cagacggcat cgcggcgggg aaatgccgat gccgccgtgt tgctggaaac gctgttggtg
    11281 gaactggacg cggtgttgtt gcaatatgcg cgggacggat ttgcgccttt tgtggcggaa
    11341 tatcaggctg ccaaccgcga ccacggcaag gcggtattgc tgttgcgcga cggcgaaacc
    11401 gtgttcgaag gcacggttaa aggcgtggac ggacaaggcg ttctgcactt ggaaacggca
    11461 gagggcaaac agacggtcgt cagcggcgaa atcagcctgc ggcccgacga cagaccggtt
    11521 tccgtgccga agcggcggga ttcggaacgt tttctgctgt tggacggcgg caacagccgg
    11581 ctcaagtggg cgtgggtgga aaacggcacg ttcgcaaccg tcggtagcgc gccgtaccgc
    11641 gatttgtcgc ctttgggcgc ggagtgggcg gaaaaggcgg atggaaatgt ccgcatcgtc
    11701 ggttgcgctg tgtgcggaga attcaaaaag gcacaagtgc aggaacagct cgcccgaaaa
    11761 atcgagtggc tgccgtcttc ggcacaggct ttgggcatac gcaaccacta ccgccacccc
    11821 gaagaacacg gttccgaccg ctggttcaac gccttgggca gccgccgctt cagccgcaac
    11881 gcctgcgtcg tcgtcagttg cggcacggcg gtaacggttg acgcgctcac cgatgacgga
    11941 cattatctcg ggggaaccat catgcctggt ttccacctga tgaaagaatc gctcgccgtc
    12001 cgaaccgcca acctcaaccg gcacgccggt aagcgttatc ctttcccgac cacaacgggc
    12061 aatgccgtcg ccagcggcat gatggatgcg gtttgcggct cggttatgat gatgcacggg
    12121 cgtttgaaag aaaaaaccgg ggcgggcaag cctgtcgatg tcatcattac cggcggcggc
    12181 gcggcaaaag ttgccgaagc cctgccgcct gcatttttgg cggaaaatac cgtgcgcgtg
    12241 gcggacaacc tcgtcattca cgggctgctg aacctgattg ccgccgaagg cggggaatcg
    12301 gaacatactt aaaaaataca ccctttttca acacggggcg gcatccgtcc gaatccgtcc
    12361 ggattctgcc gcccgacaga ctgccgccca ggcgggcggg gtttcaaaca ttgaggaaat
    12421 tctaatgaaa tggctcttca cccttttggc ggtactcaat attgccgtat tcggcggcac
    12481 ggtgggctat aaattggccg ttaaagcgac gggcggcgtg ccggaaaacc gggccgtcga
    12541 aaacacgccc cccgcaacgc ccgccgccga caatgcggcg gcatccgtgg aggatacggc
    12601 ggcactgctc aaaccgggcg acatcctgac cgaagagcag gccgagcagt tgcgcttgaa
    12661 aaaggaagcg gaacagaaaa aactgaggga gaaaaaacag cgtgaagaaa aagcccgccg
    12721 cgaaaaactc gccgccgaaa aggcgcaggc ggaacgcgaa aacggcgcgg cggatgcctt
    12781 atgcgccgcg caggcaagcc tcacgatgga cgaagacgac taccaccgca tcaaagggct
    12841 tttgggcaaa tggtcgcacg ttgccagcag gagcgttgaa aaacgcaccg ccaaagccaa
    12901 acctgccgac aaaacctacc gcgtcgtcct gcccgtttcc gccgatgccg aaaatcaggc
    12961 ggcggagctg tctgccaaag gtttcaaccc cataccgttt gacggcgcat tgagtttggg
    13021 tgtcggcaac agtcgggaaa acgcccaagc cctgcaaaac cggcttgccg gcgccggatt
    13081 cggcggggcg catattgtcg aacactttgc cgaagccgac aggcaggacg attctttgag
    13141 cgtgtcgcgt atgacggttt tgtttaccgg cgtgaatgcc gccgatgcgg acgaaatccg
    13201 taaaatcacg tccctatacg gcaaactgaa cctcaagtct tgcaaatagg cgcgaaagcc
    13261 ggacgataaa cgccaaaccc accgcgaagg tgggtttggc gtttcggttt tgagtatctg
    13321 atatataaaa agggaatgta tgtctcgtat atgccgactc caagtgtgaa agtgatgatg
    13381 gggaaatatg gtgtttaatg gttcggaacg gacggcttcc gagtggtttt gattatacgc
    13441 taataataat aattatcaat aaaaatttaa aaataaatgc agattttttg taatacgatg
    13501 aaaaataaac aaattaacct gtccgccgat gtttgtgatt cgggtcggca aactttcatt
    13561 gtgtcggaca aatcggggtc ggcaggcata gctgagggct tcgtgcctga cggaaataag
    13621 cctgccgtgt ttgaacatcc gtccgatttg gcgcggacag ggttgtcatt cgggggtgtt
    13681 tgagcgtgga ttcggggatg caaaagcggt aaaaccgttg cggatgaagg cttacggacg
    13741 gctttaggta tttttaagtg tattcaaaca acaacaaaac gcttcttcta ttgccgtatt
    13801 tagggcttgc gcggcagcct gcacaccgtg gaggccgagt gtttcgttgg ttgcggcatc
    13861 gggacgggcg gcaaggtttt ccggccggtt tttccatttt ttccgacaga gccgtgatgc
    13921 ttgggaatgg cggtttgccc gtttcagacc gccgccgttt tgggctgcga tgccgtctga
    13981 accgttcaga cggcattttt gccgcctttt tcaatattcc gccgaatgcc aaaacggctg
    14041 tccgactgtc ggcgtgctgg cttgcgcttt gtcgcgtgct tcgaccggtc cggcttcaaa
    14101 tgccagccgt ccggattcga cggcgagtgc gaaggcgcgt gccatattga ccggatcgcc
    14161 gctgcgggaa acggcagtat tcaaaagcac gccgtcaaaa ccccattcca tcacttgtgc
    14221 cgcctgtgag ggcaaaccca agcccgcgtc gataatcagc ggcgtgtcgg gcaggcgttc
    14281 gcgcaggacg ttcaacgcgt aggcgtgaac cgcgcccaaa cccgtgccga tcggagccgc
    14341 ccacggcatt aacgcctgac agcccacatc gagcaggcgg cggcaggcaa tcaggtcttc
    14401 ggtgcaataa ggcagcactt tgaagccgtc tttaatcagg atttccgccg cttcgacaag
    14461 ttggaacaca tccggctgca aggtgtcgtc gtcgccgatg agttcgagtt taatccaatc
    14521 ggtttcaaac acttcgcgcg ccatttgcgc cgtcgttacc gcttcctgca cgctttggca
    14581 gcctgccgtg ttcggcagga cgggaacgcc ggtttcttga agcagcgacc aaaacccctg
    14641 accgtgcgcc tcgccgccgc ttcccgtgcg gcgcagcgag acggtaatca tcgcgggttg
    14701 ggcgatacgg acggattgtt tgaggatttc aggggtcggg taggcagccg tgccgagcag
    14761 cagccgtgaa aggaaagttt ctccgtatag ggtgagcata atgggttcct ttgtatagtg
    14821 gattaacaaa aaccagtacg gcgttgcctc gccttagctc aaagagaacg attctctaag
    14881 gtgctgaagc actaagtgaa tcggttccgt actatccgta ctgtctgcgg cttcgtcgcc
    14941 ttgtcctgat ttaaagttaa tccaccataa cgttgttttg gggacagggg tcgtctgaaa
    15001 aggcaaaacc gcctagccgc cgaccaccgg ccgcacgata tcgattttgt cgttttcgtt
    15061 taaaaccgtt tccgcatacg cgcctttggg gacgaaaacg gtgttgaccg ccacggcaaa
    15121 gggcttttgc ggcgcggttt gggcgatgag gtcggcaacg cttgtgccgt gaagttcggc
    15181 gggtccgccg tttaagatga tgttcatggt ttctcgatgt ttct
//
LOCUS       DAXHRP010000034        14943 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.034, whole genome shotgun sequence.
ACCESSION   DAXHRP010000034 DAXHRP010000000
VERSION     DAXHRP010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14943
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.034"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(136..1920)
                     /gene="lpdA"
                     /locus_tag="ACFM72_000783"
     CDS             complement(136..1920)
                     /gene="lpdA"
                     /locus_tag="ACFM72_000783"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC6257379.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1997..3604)
                     /gene="aceF"
                     /locus_tag="ACFM72_000784"
     CDS             complement(1997..3604)
                     /gene="aceF"
                     /locus_tag="ACFM72_000784"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HFC6257380.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAEAQPAPAAAPVA
                     AGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVV
                     KAVFLKVGDKVSEGTAIIEVETAGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPS
                     APAAAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQ
                     GGAAKPAAAGASLGSSLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPH
                     VTVHEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDN
                     LVLKNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQG
                     ACFTISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPIWNGKEFAPRLMCPLSLSFDH
                     RVIDGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3754..6417)
                     /gene="aceE"
                     /locus_tag="ACFM72_000785"
     CDS             complement(3754..6417)
                     /gene="aceE"
                     /locus_tag="ACFM72_000785"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HFC6257381.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7112..8824
                     /locus_tag="ACFM72_000786"
     CDS             7112..8824
                     /locus_tag="ACFM72_000786"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HFC6257382.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANVELAPTLPLKGERTAAQAELVKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASSAAIVEQFGANGG
                     SLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            8887..9543
                     /locus_tag="ACFM72_000787"
     CDS             8887..9543
                     /locus_tag="ACFM72_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HFC6257383.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGMGEGEDILGCVAGYGVGLDLTA
                     RDIQCHLKAQGLPWLKAKGFRHSACVSDFAAADRIGNPEKVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9553..10008)
                     /gene="ruvX"
                     /locus_tag="ACFM72_000788"
     CDS             complement(9553..10008)
                     /gene="ruvX"
                     /locus_tag="ACFM72_000788"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HFC6257384.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSHKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(10001..10549)
                     /locus_tag="ACFM72_000789"
     CDS             complement(10001..10549)
                     /locus_tag="ACFM72_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HFC6257385.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10551..11111)
                     /locus_tag="ACFM72_000790"
     CDS             complement(10551..11111)
                     /locus_tag="ACFM72_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HFC6257386.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11439..13244
                     /locus_tag="ACFM72_000791"
     CDS             11439..13244
                     /locus_tag="ACFM72_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC6257387.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13364..14848
                     /locus_tag="ACFM72_000792"
     CDS             13364..14848
                     /locus_tag="ACFM72_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HFC6257388.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFECAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAVPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3533 a         3700 c         4218 g         3492 t
ORIGIN      
        1 ccttgtcctg atttttgtta atccactata ggtcggagaa gatattttaa tccgctgtaa
       61 aatagaaaat gccgtctgaa catttcagac ggcatttgct caaataaacc ttatcggctg
      121 tttattcagt cggatttatt ttttcttttg cggaggcagg tcggtacaag tacccaatgc
      181 cacttccgcc gccataccga tggattcgcc caaggtcggg tgcgggtgga tggttttgcc
      241 gatgtctgcc gcgtcgcagc ccatttcgat ggcaaggcag acttcgccga tcatatcgcc
      301 accgttcgga ccgacaatgc cgccgccgat gatgcggccg gtttcggcat caaaaatcag
      361 cttggtaaag ccgttgtcgc aaccgttggc aatcgcacgg ccggaagccg cccacgggaa
      421 gttggctttg gtgattttgc ggccggaggc tttggcggac agttcggttt cgcccaccca
      481 cgccacttcg ggggaagtgt aggcaacgcc cggaatcacg cgcgcgtcga agtaggcttt
      541 gtggccggcg cagttttcgg cggcaacgtg gccttcgtga acggctttgt gcgccaacat
      601 cggctgaccg acgatgtcgc cgatggcgta gatgtgcggc acattggtac gcatttgttt
      661 gtccacttcg atgaagccgc gatcggttac ggcaacgcct gctttttccg cgctgatgag
      721 tttgccgttg ggcgcgcggc cggcggcaac caatacggca tcgtagcgtt gcggctcttt
      781 aggcgcgttc gcgccttcaa aggtaacgta aacgccgtct tctttcggct caactgcaac
      841 ggttttggtg ttgaccataa tgttgtcaaa acggtattcg ttttgttttt gccatacttt
      901 taccaaatcg cggtctgcgc cttgcatcag gccgtccatc atttcaacca catccaaacg
      961 cgaacccagc gtgctgtaaa ccgtacccat ctcgaggccg ataatgccgc cgccgataat
     1021 cagcagtttg cccggtactt ctttcagagc caatgcgccg ctggaatcga tgatgcgcgg
     1081 atcttcagga atgaaaggca gtttggttac gcggctgcct gctgcaatga tacagttttt
     1141 gaaggcaacg atttttttct cgccggtagg ggctgcctgt tcgtacgcgt cgccggcagt
     1201 cagcgacact tccaagtggt gcggatctaa gaattgcccg tcgccttgga taacgtccac
     1261 tttacggctt ttcgccatac ctgccaaacc gcccgtgagg cgggaaacta cgccgtcttt
     1321 gtaggcgcga agcatatcga tgtcgagttc cggctcgggg tatttgatac cgttggcagc
     1381 caagtggcgc acttcgtcga taacggcggc attgtgcaac aaggctttgg aagggataca
     1441 gccgacgttc aggcaaacgc cgcccaaagt tttgtaacgt tcgacgatgg cgactttcaa
     1501 gccttcatcg gcagcggcaa atgcagcgga gtaaccgccg ggaccgccac ccaatacgac
     1561 cacgtcgtac tcggcatcgg cagaaccgcc gaattgcgcg gcttgcggag caggagcagc
     1621 agctttaggg gcttcttgcg ccggggcggc agccgcttcg gctttaggag cggcagccgt
     1681 gccttcagct tcaacgacaa caatcaaacc gccttcggag attttgtcgc cgactttgac
     1741 tttcacttct ttgaccacgc ccgcaacttc ggcaggcacg tccatcgtcg ctttgtcggt
     1801 ttccaaggta atcagggtgt cgtcaacggc gatggtgtcg cccacgttta cttcaaccgc
     1861 gataatatct acattttcgt gtccgccaat gtcgggcact ttcaattcaa ctaagctcat
     1921 gtctcatctt tctgaatgat gttcaaactt ccttttcaga cggcacagac cgctatgccg
     1981 tctgaagccg atcgggttac agggtaatgc ggcggaagtc tttcaacagc ttcgccaaga
     2041 atacggtaaa gcgcataccg gccgcaccgt cgatgacgcg gtggtcgaag gacaggctca
     2101 acgggcacat caggcgcggg gcaaactctt tgccgttcca aatcggtttg atttgggatt
     2161 tgcacacgcc caagatggcg acttcgggag cgtttacaat cggcgtgaag cctgtgccgc
     2221 cgataccgcc caagctggaa atggtaaagc acgcgccttg catttcttgc ggtttgagct
     2281 tgccttcgcg ggcttttttg gacaattcgg tcagctcttg gctgatttgt ttcaagcctt
     2341 tttgatccac gtctttgatg acgggaacaa ccaagccgtt cggcgtatcg gctgcgaaac
     2401 cgatgttgaa gtagtttttc agcaccaggt tgtcgccgtc cagagaagcg ttgaattcgg
     2461 ggaaggcttt cagcgcggaa acggaggctt tgatgatgaa cgccaacggt gacagtttca
     2521 cgccttcgcg ttcccattct ttgttcagtt gtttgcggaa ttcttccagc tcggtcatat
     2581 ctgcttcttc gtgtacggta acgtggggaa tcaccaccca gttgcgagac aggttttgac
     2641 cggagatttt cttaatgcgg gacaattctt taacttcgac attgccgaat ttggagaagt
     2701 ccactttagg ccacggcagc aagtccagac tgctgcccaa agatgcgccg gctgcggcag
     2761 gttttgccgc gccaccctgc attacggatt tcacaaaggc tttgatgtcg tcgcccacga
     2821 tacggccttt caagccggta cctttgactt ggcccaaatc cacgcccaat tcgcgcgcca
     2881 gtttgcgtgc ggaagggccg gcgtgtgctt tggcgaaagc ggcctcgtcg attttggcag
     2941 cggcaggtgc agaaggtgca ggcgcggcgg cgggtgcggc ggcagcagtc ggaggcggag
     3001 cggcagccgg tgcggcagct tgagcggctt gagcaggggc tgctgcggca gagccggcgg
     3061 tttctacttc gataatggca gtaccttcgg acactttgtc gccgactttt aagaatacgg
     3121 ctttaacgac accggcagcg gtacaaggta cgtccatcgt tgctttgtcg gtttccaaag
     3181 taatcagcgt gtcgtcttcg gcaacggtat cgccgacttt gatctcgacg gcgattacat
     3241 ccacatcggt atggccgccg atgtcgggaa cggctacttg aacggttgca ccgcctgcgg
     3301 caacgggtgc ggcagcaggt gcaggttgtg cttcggcagc agcaggagcg gcttcggcag
     3361 cggcggcacc ggtttcaacg gtcaaaatta cgccgccttc ggagattttg tcgccgactt
     3421 tgacttttac ttctttcacg acaccggccg catcggcagg cacatccatc gtggctttgt
     3481 cggtttccag tgtaatcagg gtgtcgtcaa cggcgatggt gtcgcccgct ttaacttcta
     3541 cggcgatgat gtcgacgttt tcgtgaccgc cgatatcggg gactttgatt tctacgatac
     3601 tcatttgagt tcctttaatc tttttcaatt ggatgccgtc tgaaagctgc ttcaggcggc
     3661 atcggtacgg tttgtctgct caaaccattc gggcattcgg ttttcagacg gcctgatgtc
     3721 ggaatggggc aaacaggccg tctgaaacat caatcagcgt ttccagctag gagctgaatc
     3781 ggctttgatg ccgtatttct caatggcttg ttgaacggtt tctttgctga ctttgccttg
     3841 ttccgccaat gcggccaatg cggccacggc aacgttgtag cgatccactt caaagaagcg
     3901 gcgcaggttg gcgcggctgt cggagcggcc gaagccgtca gtacccaaga cgtggtagtc
     3961 gttcgggatg taggcgcgga tacggtcagc atagctgcgg atatagtcgg tagcggcaat
     4021 aaccggaccg tcatgacctt gcagttggga agtaacgaaa ggtacttttt cggcttccag
     4081 cggatgcagg cggttgaagc gttctacctc gacagcgtcg cggtgcagca ggttgaagga
     4141 tgggcaagac caaatgtctg cttccacgcc gaagtcggct ttcagcagct cggcaccggc
     4201 aatcacttct tgcaaaatcg taccggaacc catcagttgg actttcttgt cgcctttgcc
     4261 gccggctttc agcaggtaca tacctttcaa gatgtcttgt tccgcacctt cgggcatatc
     4321 cggatgggtg tagttctcgt tcatcagggt gatgtagtag aacacgtctt cattattggc
     4381 atacatacgg cgcagaccgt cttgtacgat gacggcgact tcgtattgga aagtcgggtc
     4441 ataagatacg cagttcggaa tcaggtcggc ctggatgtgg ctgtggccgt cttcgtgttg
     4501 caggccttcg ccgttcagcg tcgtacggcc ggcagtaccg cccagcagga agccgcgcgc
     4561 gtgcatatcg cccgccgccc aagccaagtc gccgatacgt tggaaaccga acatagagta
     4621 gtagatgtag aacggaatca tggcgaagtt gctgttggcg tagctggttg cagccgcaat
     4681 ccagtcggcc atcgcgcccg gttcgttaat accttcttgc aagatttgac cgtcaacgga
     4741 ttctttatag aacatcagtt ggtctttgtc ttgaggggta tattgctgac ctttcggatt
     4801 ccaaataccg tattggcgga acataccttc catgccgaaa gtacggcttt cgtcgggaac
     4861 gataggtacg acgcgtttgc cgattttttt gtctttcagc aaagtggaca ggatgcggac
     4921 gaatgccatc gtggtcgaga actcgcgttc accgctggat ttgagttgtg cgtcgaatgc
     4981 tgacagctcg ggcacttcca atacttcctg cgtcggtttg cgttgcggca ggtagccgcc
     5041 caaagcatcg cggcgtgcgt gcaggtattt gtattcttcc gtatcggggg caaaagtcag
     5101 gtaaggcaga tcgccgcttt cgatttgttc gtcggtaacc ggaatgtcaa agcggtcgcg
     5161 gaattgtttc agggacgctt tgtccatttt tttggcttgg tgggcaacgt tctgaccttc
     5221 gccggatgcg cccataccgt aacctttaat ggttttcgcc aagatgacgg taggtttgcc
     5281 gtcggcatgg ttcgctgcgc ggtcgtaggc gttgtacact ttttgcgggt cgtggccgcc
     5341 gcggttcaat gcccagagtt gctcatcggt catatcggca accaatgctt tcagttcggg
     5401 cgtattgaag aagtgttcgc gcacatacgc gccgtctttg gatttgtaag tttggtagtc
     5461 gccgtccaaa cattcttcca tacgttggcg caggataccg tctttgtctt tcgccaagag
     5521 gcggtcccag cggcggcccc aaatgacttt gacgacattc cagccggcgc cggcaaagtt
     5581 gccttccaat tcttggatga ttttgccgtt gccgcgtacc ggaccgtcca agcgttgcag
     5641 attgcagttg atgacgaaaa tcaggttgtc caagccttcg cgtgcagcca gtgcgattgc
     5701 accttgagat tcgggttcgt ccatttcgcc gtctccgcag aaacaccata ctttacggcc
     5761 tttggttttt gccaaaccac gcgattccaa gtatttcagg aaacgcgcct gataaatcgc
     5821 catgatgggc cccaagccca tggatacggt cgggaactgc caaaagtcgg gcaagaggtg
     5881 ggggtgcgga taggaaggca gaccgtgtcc gtccacttct tggcggaagt tgttcagctg
     5941 gtcttcggtc agacggccct cgacgaatgc gcgtgcatag atgcccgggg cgacgtgacc
     6001 ttggaagaag accaaatcgc cttcttcgcc ttcgcctttg gctttccaaa agtggttgaa
     6061 accgacttcg tacatggtgg cggcagattg gaaagatgcg atgtgcccac ccagttccaa
     6121 atctttcttg ccggcgcgca atacgatggc ggcggcgttc cagcgcacga atgcgcggat
     6181 gcggtgttcg atgttttggt cgcccggaat gcctttttcg ttttcaaccg aaacggtatt
     6241 caaatacggg gtggtcgtgc cgtgtggcat acgtacgccc ttgtcgcggc agtatttgac
     6301 caggttttcc aagaggtatt gtgcgcgttc gccgccttca tattcgagga cggagcttaa
     6361 cgcgtccagc cactcttggg tttcgatagg gtcaacatcg tgtaattggg tggacatagt
     6421 atctatcctt tatgttgagt gtttaatcgg cagggagggt gtagccaacc cctttatttt
     6481 cgtttgtgaa aaataataag caaaaacgaa aatttctaaa tcaaaccgaa aaaaaataat
     6541 ttaagtttaa tgttttcaaa aaattataaa agttttggaa acaagggaaa acttgaaaaa
     6601 aatgttcgat ctgctccaca cgaaatccta tcagcaatcg ggtctgctgg caaataacca
     6661 tgcctgtaaa agcaggtttt atactgaagt tggcgtttgg taaggtcaag tctttttgat
     6721 ttcgaaatat tctgtttgat tttggcgata ttttttcgga attgtggtat atcgaatcat
     6781 tatgtctctg tcggcaattt tcctattgta gaaaatctat acacaagctt tgtggataac
     6841 cgtgttgata agccacggct tgtgttaaaa aagtcttacg caacaaatgt acgcttattt
     6901 tgattaaaaa ataggcacat ttaaatctat aaaaatcatg tgcttatgtt caatatgatg
     6961 tttctggtca tgtttttgcc gtctgttatg ggatttgtcc cgcgcttggg gcagggggtg
     7021 aattttggag gttggtgcaa aacctgcttt tttcgcgtta caatctgcac ccgatttact
     7081 tttgaatttg cctgtttgga aaaatacttt tatgaaagcc agccaattct ttatctctac
     7141 tttaaaagaa gcccctgccg aagccgcgct tgccagccac aagctgatga ttcgcgccgg
     7201 tctgattaaa gccaacgcgt ccggccttta tacttggatg ccgatggggc tgcgcgtgtt
     7261 acgcaaagtc gaaaacgtcg tgcgcgagga aatggcgcgc gcgggcagcg tggagctgct
     7321 gatgccggtg gtgcagcctg ccgagctgtg gcaggaatcc ggccgctggg aattttacgg
     7381 taaagaactg ctgcgcctga aagaccgcca cgaccgcgat ttctgcatgg gaccgacctg
     7441 cgaggaagtc atcgccgaca tcgtgcgtaa agagatcaac agctacaaac aactgccgaa
     7501 aaacttttac cacatccaaa ccaaattccg tgacgaagtg cgcccgcgct tcggtgtgat
     7561 gcgtgcgcgc gagtttgtca tgaaagatgc ttattccttc catgccgact acgcctcgct
     7621 tcagacgacc tatgatgcca tgtatgacgc ttactgccgc atcttcaccc gtctgggctt
     7681 ggcattccgc cccgtcgccg cagataccgg cagcatcggc ggtaccggct ctcacgagtt
     7741 tcaagtgttg gcggaaagcg gcgaagatgt gattgcatac agcgacactt ccgattacgc
     7801 cgccaatgtc gagctggcac cgaccttgcc gcttaaaggc gaacgcaccg ctgctcaggc
     7861 agaactcgtc aaagtacata caccaaacgt caaaaccatt gagtctttgg ttgaattcct
     7921 gaatattccg gttgaacaaa ccctcaaatc catcgtggtt gaaggcgaaa atgaaggcga
     7981 aatcgtttta ttgctgttgc gcggcgacca tgagttcaac gacatcaagg cagaaaaact
     8041 ggcgggcgtg aaatcgccat tgacgatggc aagttctgcc gcgattgtcg aacagttcgg
     8101 cgcaaacggc ggctcgctgg gtccggtcgg ctttgcaggt aaagtttatg ccgatttcgc
     8161 cactgaaaaa ggcgcggact gggtcatcgg tgcgaacgaa gacggctacc actataccgg
     8221 cttcaacttc gggcgcgatg ccgccgagcc tgaattcgtc gatttgcgta atgtggtcga
     8281 aggcgacgaa agccccgacg ggcaaggccg tctgaaactg gcgcgcggca tcgaagtcgg
     8341 acacgttttc caattgcgcg acaaatacac ccaagccatg aacgtaagct tccttgacaa
     8401 caacggcaaa tcgcaagtta tggaaatggg ctgctacggc atcggcatca cccgcgtcgt
     8461 tgccgccgcc atcgagcaga ataacgacga aaaaggcatc atctggacca aagcaatggc
     8521 gccgtttgaa gtcgttatcg tgccgatgaa ctacaaaaaa tcagacaccg tacgcgaagc
     8581 cgccgacaaa atctatgccg aattgctggc ggcaggcgca gacgtcctcc tcgacgaccg
     8641 cgacgaacgc gcaggcgtgt tgctgaacga ttccgagctg ttgggtattc cgcaccgcat
     8701 cgtcatcggc gaccgcgctt tgaaagaagg caatgtcgaa tacgccgaac gccgcaacaa
     8761 cgaagcgcag gcagttgcaa tcggagaaat tgttgcgcgt gtaacagctt cattaaatgg
     8821 gtaagcttgg tcaaatgccg tctgaaaata atttcagacg gcatttttat ttggggagaa
     8881 aatgaagtgg cttcagtatt tttagaagga gaagcagtcg aggtcggcaa tattttctgt
     8941 atcggcagga actatgccgc acatattgaa gagttaaaaa acgaaatacc ttccgaacct
     9001 gtggtgttta tgaagccgtc aggcagcatt ttgaatagcg gcggtacaat cttgctgccc
     9061 gagtttagta gggatgtgca gtttgagtgc gaactcgtgc tgctggtcgg taaggattca
     9121 gacggcatgg gagagggtga agatattttg ggatgtgtgg cggggtacgg cgtgggtttg
     9181 gatttgaccg cgcgagacat ccaatgccat ctgaaggcgc aggggctgcc ctggctgaag
     9241 gcaaaagggt tcaggcattc cgcgtgcgtg tcggattttg cggcggcaga cagaatcggc
     9301 aatcccgaga aggtgttgtt ttcattaaaa caaaacggcg tattgaaaca gcgcggggat
     9361 accggtttga tgatttaccc gattcgggaa attttacaca aactggcggc agattacggt
     9421 ttggggaaag gggatttggt gtttaccgga acgccttccg gcgtgggcgc aatcggtgcg
     9481 ggggacaatt tggcattgga gctggacggc ttggtgcgcg cctctttcac ggtagggtgt
     9541 taaccgcgcc gcttaaccct cacgcccgtt gaaacattcc gccggaccgc cctcgaaaaa
     9601 accgtgcaag atggcttgcg ccgccacttg gtcgagcacc gatttgcgtt ttttgccgaa
     9661 gacctgtgct tccgaaagca ggctttcggc atagacggac gacagccgtt cgtcaaccca
     9721 atagacgggg agattgaacc tgccgttcag cctgcgtccg aacttgtgcg acaggtgcgt
     9781 catttcatgt ttcgtgccgt cggtatgcac gggcagtccg acgacaaaat aacgcggctg
     9841 ccattcttga accagcttgg cgattgccgc gaacttttca tcgttgctgc cgccggtaac
     9901 ggtgctcaaa ggatgggata gccctaattc cgcgtctcct tgtgccacgc cgatacgcgc
     9961 ttcgccgaag tcgaatgcca gtgccgttcc ttttggaatt ttatgcatgg ccggctcccg
    10021 aaaacagggc gagcgggtcg atgccgagtt tggcgaatgc ggcggcgtaa cggtgttcgt
    10081 aggggatgtc gaacaggatg tgttcgtcgg cgggaacagt cagccacgca ttgtcggcaa
    10141 gttcgcgttc gagctggcct tttccccagc ttgaatagcc tatgctgatc aaggctttgt
    10201 caaccgcacc ttcgcgtgaa atattttcaa tcacgtctcg ggaagaagtt agcgcgatat
    10261 tgtctgaaac gccgatactg ctttgccagt tgccgatcgg ggtatgcacg acataacctc
    10321 gctcgacttg caccggcccg cccatcatca cgctgtcgtg ctgcatccgc atggggatgt
    10381 ttttgccggt ggcggaaaaa atcatgtcca tcgtaatcgg agagggtttg ttgatggcga
    10441 tgccgagtgc gccgtcttca tcgtgtttgc agatatagac gaccgattgt gaaaaaaacg
    10501 cgtcttccat atcgggcatg gcgacgagaa agtggttgga gaggttcata tcagcgtttg
    10561 tcgggatttt ctatcgggtt ggaaatcatg caggcgccgg caagcaggtt gccggaagta
    10621 tcggcttgca ccccatcggt ttgcggtatg ccgccgccga aacaggaaac cgcgcttaag
    10681 gaatttttcg gcgagccttg gatgatttta tcgctgtaca ccaaataggc gaaggttttg
    10741 cgtttggggt cgtaataacg gacaatctgc cggctcttga acgcgaagct cgcaccgtgt
    10801 ttgaaaactt ctttcggttt gcgcacggcg gtttcgtcaa aagaaatcga agatgccgtc
    10861 tgaacgcacg aaaccgatgc gtcggacgcg tcctcttcca aattgaccat ttccttcaag
    10921 ccgccttttt ttgcatacga aatataacag gcaacccctt gaacgtcggg atcgtcgaat
    10981 ccttccactt cgatacggtc gtttttgccc agtatgttga aaacggtact tgcccgtccg
    11041 attttatcgg tttcgccgct gccgcaggca gtcagcagga cggcggcaga cagcagtagc
    11101 agtctgttca tcaaaatttc cttatcggtt gaatccccgt tttccgtgaa ggcggcaggg
    11161 cttgctttgt ttggaggggc gcacgttccc aaaatcgggc aacatacggt atgcggctta
    11221 atgtgctacc ctgtgtgtcg gaacacaata tccgttgcgg cattgaaaat atgacgcaca
    11281 atataaggct gtttgagccg attgcaagta tccgcgcaaa gaaggcgcaa gattgggcaa
    11341 acggcatttt cagatggcat aactgacagt ataatccaaa cgtccggctg ctttcgtgca
    11401 gccttcagta ttatccaact ttttccgaag gtcgaaccat gcgctacaaa ccccttctgc
    11461 ttgccctgat gctcgttttt tccacgcccg ccgttgccgc ccacgacgcg gcacacaacc
    11521 gttccgccga agtgaaaaaa cagacgaaga acaaaaaaga acagcccgaa gcggcggaag
    11581 gcaaaaaaga aaaaggcaaa aatggcgcag tgaaagataa aaaaacaggc ggcaaagagg
    11641 cggcaaaaga gggcaaagag tccaaaaaaa ccgccaaaaa ccgcaaagaa gcagagaagg
    11701 aggcgacatc caggcagtct gcgcgcaaag gacgcgaagg ggataagaaa tcgaaggcgg
    11761 aacacaaaaa ggcacatggc aagcccgtgt ccggatccaa agaaaaaaac gcaaaaacac
    11821 agcctgaaaa caagcaaggc aaaaaagagg caaaaggaca gggcaatccg cgcaagggcg
    11881 gcaaggcgga aaaagacact gtttctgcaa ataaaaaagt ccgttccgac aagaacggca
    11941 aagcagtgaa acaggataaa aaatacaggg aagagaaaaa tgccaaaacc gattccgacg
    12001 aattgaaagc cgccgttgcc gctgccacca atgatgtcga aaacaaaaaa gccttgctca
    12061 aacaaagcga aggaatgctg cttcatgtca gcaattccct caagcagctt caggaagagc
    12121 gtatccgcca agaacgtatc cgccaagagc gtatccgtca ggcgcgcggc aaccttgctt
    12181 ccgtcaaccg caaacagcgc gaggcttggg acaagttcca aaaactcaat accgagctga
    12241 accgtttgaa aacggaagtc gccgctacga aagcgcagat ttcccgtttc gtatcgggga
    12301 actataaaaa cagccagccg aatgcggttg ccctgttcct gaaaaacgcc gaaccgggtc
    12361 agaaaaaccg ctttttgcgt tatacgcgtt atgtaaacgc ctccaatcgg gaagttgtca
    12421 aggatttgga aaaacagcag aaggctttgg cggtacaaga gcagaaaatc aacaatgagc
    12481 ttgcccgttt gaagaaaatt caggcaaacg tgcaatccct gctgaaaaaa cagggtgtaa
    12541 ccgatgcggc ggaacagacg gaaagccgca gacagaatgc caaaatcgcc aaagatgccc
    12601 gaaaactgct ggaacagaaa gggaacgagc agcagctgaa caagctcttg agcaatttgg
    12661 agaagaaaaa ggccgaacac cgcattcagg atgcggaagc aaaaagaaaa ttggctgaag
    12721 ccagactggc ggcagccgaa aaagccagaa aagaagcggc gcagcagaag gctgaagcac
    12781 gacgtgcgga aatgtccaac ctgaccgccg aagacaggaa catccaagcg ccttcggtta
    12841 tgggtatcgg cagtgccgac ggtttcagcc gcatgcaagg acgtttgaaa aaaccggttg
    12901 acggtgtgcc gaccggactt ttcgggcaga accggagcgg cggcgatgtt tggaaaggcg
    12961 tgttctattc cactgcaccg gcaacggttg aaagcattgc gccgggaacg gtaagctatg
    13021 cggacgagtt ggacggctac ggcaaagtgg tcgtggtcga tcacggcgag aactacatca
    13081 gcatctatgc cggtttgagc gaaatttccg tcggcaaggg ttatatggtc gcggcaggaa
    13141 gcaaaatcgg ctcgagcggg tcgctgccgg acggggaaga ggggctttac ctgcaaatac
    13201 gttatcaagg tcaggtattg aacccttcga gctggatacg ttgatcggat tgccgaaacg
    13261 gtaggcttta tgcaaatcgt gccgatatgg tgcgctgttc cgtgaagttt gccgtacctg
    13321 tattttccgg tttttggaaa tcaagagaga aagttaaaga agaatgtcga aacctgtttt
    13381 taagaaaatc gcactttata ctttgggtgc aatcagcggc gtggccgtca gtctggcggt
    13441 gcagggtttt gccgccgaga aggacaggcg ggataacgaa gtcctgccgg tgcaatccat
    13501 ccgcacaatg gcggaggttt acggtcaaat caaggcaaac tactatcagg acaaacccga
    13561 tgccgatttg tttgaatgtg cgatgaaggg tatggtggcc ggtttggatc cgcattccga
    13621 atatatggat aaaaaaggtt atgccgagat aaaggagtcc accagcggcg aatttggcgg
    13681 cttggggatg gaaatcgggc aggaagacgg atttgtcaaa gtggtttcgc cgattgagga
    13741 cacgcctgcg gaacgggcgg gggtgaaaag cggcgatttc attgtgaaaa tcgataatgt
    13801 ttcgacacgc ggcatgacgg tcagcgaagc ggtgaagaaa atgcggggca agccgggtac
    13861 gaagattact ttgacgctgt cgcgcaaaaa tgccgacaag ccgatagtcg tcaacctgac
    13921 ccgtgccatt attaaagtga aaagcgtccg ccatcacctg atcgaacccg attacggcta
    13981 tatccgcgtg tcgcagttcc aagagcggac ggtcgaaagc gtcaataccg ccgcaaaaga
    14041 gctggtaaag gaaaataaag gaaaaccgct caaggggctg gtgttggatt tgcgcgacga
    14101 ccccggcggg cttttgactg gcgcggtcgg cgtgtcggcg gcatttctgc cgtctgaagc
    14161 agtcgtcgtc agcaccaagg gacgcgacgg caaagaccgc atggtactga aagccgttcc
    14221 tgaagattat gtgtacggga tgggcggcga ttcgttggcg ggcattcctg ccgagttgaa
    14281 aaccataccg atgacggtat tggtcaattc cggttcggct tccgcgtcgg agattgtcgc
    14341 aggtgcattg caggatcata aacgcgcggt catcgtcggt acgcagagct tcggcaaagg
    14401 ttcggttcag actttgattc ctttgtccaa cggcagcgcg gtcaagctga caacggcact
    14461 gtattatacg ccgaacgacc gttctattca ggcgcagggg attgttcccg atgtcgaagt
    14521 aaaagataag gaacgcattt ttgaaagccg cgaggcggat ttggtcggac acatcggcaa
    14581 tcctttgggc ggcgaggatg tgaacagtga aacccttgcc gtgccgcttg aaaaagatgc
    14641 ggataagccc gctgtaaaag aaaaaggtaa aaagaaaaag gacgaggatt tgtcttcaag
    14701 gcggattccc aaccctgcca aagacgacca gttgcggaaa gctttggatt tagtcaagtc
    14761 gcccgagcag tggcagaagt ctttggggct ggcggcgaaa aagccggttt caaataaaga
    14821 taagaaagat aaaaaagata agaagtaggt tttgacgatg ccgtctgaaa ggatttcaga
    14881 cggcatatta tgtttgaaag gacaggttat gagcgatttt ttaccggaat ttgaaccgtg
    14941 cgg
//
LOCUS       DAXHRP010000035        14870 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.035, whole genome shotgun sequence.
ACCESSION   DAXHRP010000035 DAXHRP010000000
VERSION     DAXHRP010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14870
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.035"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(87..3572)
                     /gene="smc"
                     /locus_tag="ACFM72_000793"
     CDS             complement(87..3572)
                     /gene="smc"
                     /locus_tag="ACFM72_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HFC6257389.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KFLTAQLNRQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVKLEENESQVEEKQTELAEWAMQVAEHEERLPELEEAQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQNR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQASDHAAAPQLWQHITAPAEWQHALSVILAERLQARSVPHGFVPPAPLPQGQAAWL
                     SDGLSGGIKKSLPAQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIVTLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIAQLEQQTLDWQERQQELALAYETEFQNDEQHIKLEELS
                     EAVQTLDEEYIVVQEKLAQIQEQGREQYAKVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITLLEEAIAQIDDKTKARFKETFDAVNSKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCRLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            complement(3651..3797)
                     /locus_tag="ACFM72_000794"
     CDS             complement(3651..3797)
                     /locus_tag="ACFM72_000794"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257390.1"
                     /translation="MSWRIITRPAAGQYGKCRAKHRALAEPGFGALKMPSEGFRRHRG
                     CGMR"
     gene            3821..4543
                     /gene="lpxH"
                     /locus_tag="ACFM72_000795"
     CDS             3821..4543
                     /gene="lpxH"
                     /locus_tag="ACFM72_000795"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HFC6257391.1"
                     /translation="MKPAYFISDLHLSEKQPELTALLLRFLRSSAARQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLATKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFGAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKY"
     gene            4812..6398
                     /locus_tag="ACFM72_000796"
     CDS             4812..6398
                     /locus_tag="ACFM72_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HFC6257392.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     DDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6567..6770)
                     /locus_tag="ACFM72_000797"
     CDS             complement(6567..6770)
                     /locus_tag="ACFM72_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HFC6257393.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6886..7383
                     /locus_tag="ACFM72_000798"
     CDS             6886..7383
                     /locus_tag="ACFM72_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HFC6257394.1"
                     /translation="MTALTLPEDIRQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            7465..8658
                     /locus_tag="ACFM72_000799"
     CDS             7465..8658
                     /locus_tag="ACFM72_000799"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HFC6257395.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQNFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDNNIDYLCES
                     IVKVL"
     gene            complement(9062..9997)
                     /gene="hemC"
                     /locus_tag="ACFM72_000800"
     CDS             complement(9062..9997)
                     /gene="hemC"
                     /locus_tag="ACFM72_000800"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HFC6257396.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYTRLEEMPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHGVTNACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10116..10631
                     /gene="ybeY"
                     /locus_tag="ACFM72_000801"
     CDS             10116..10631
                     /gene="ybeY"
                     /locus_tag="ACFM72_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HFC6257397.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            10633..11457
                     /locus_tag="ACFM72_000802"
     CDS             10633..11457
                     /locus_tag="ACFM72_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HFC6257398.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(11586..12965)
                     /gene="nhaC"
                     /locus_tag="ACFM72_000803"
     CDS             complement(11586..12965)
                     /gene="nhaC"
                     /locus_tag="ACFM72_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HFC6257399.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLVRGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVILALMRINAVVAMLFTVMVAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVVKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAIRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13256..14479)
                     /locus_tag="ACFM72_000804"
     CDS             complement(13256..14479)
                     /locus_tag="ACFM72_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HFC6257400.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3514 a         4199 c         3806 g         3351 t
ORIGIN      
        1 tttaaattta attcactata ccgtctgaaa acctgtatcg caacacgtca ttaagaacgg
       61 caagattcaa ccgttctgca acccgttcaa acggcttccg ccatttccaa cgcttgtttg
      121 atgtccacgg cgacgacgcg cgatacgcct ttttcctgca tggttacgcc gaccagctgc
      181 tctgccattt ccatggtcag gcggttgtgg gagatgtaga ggaactgggt ttgcgccgac
      241 atttctttga ccagcctgca gaaacgcgag gtgttggcgt cgtccagcgg ggcatcaact
      301 tcgtccagaa ggcagaaggg tgcggggttg aggctgaaca gggcgaacac gaggctcatg
      361 gcggtgaggg ctttttctcc gccggaaagg aggtggatgg tgctgttttt cttgccgggc
      421 gggcgcgcca tgatggacac gccggcggtc aggaggtcgt cgcctatcat tttgagggtg
      481 gcttcgccgc cgccgaacag ggtcgggaag aaggtttgga ctttgctgtt gacggcatcg
      541 aaggtttctt tgaaacgcgc tttggtttta tcgtcgattt gggcgatggc ttcttccaaa
      601 agggtgatgg cggcctgcac gtcttcgctt tggctgcggt agtagccgtc gcgttcgcgc
      661 gcttcttcga gttcttgcag ggcggcgagg ttgaccgcgc cgagggcttc gatttgttgc
      721 gagaggctgc cgatgctgct gttcaatact ttcggcgatt ctttcgccaa cgcttcgagc
      781 gcgtccaaat cggcggcgcg ttcggtcagg ttttgatggt agcgtttggc gttgatcagg
      841 gcttcctgct gctgcaacaa ggcggtttgg gtggcggcct gaagctgcgg cagcttggtt
      901 tgcagggttt gcactttagc gtattgctcc ctgccctgtt cctgaatctg cgcgagtttc
      961 tcttgcacaa caatatattc ttcgtccaag gtctgtacgg cttcgcttaa ttcttcaagc
     1021 ttgatgtgct gctcgtcgtt ttggaactcg gtttcatagg cgagggcaag ctcttgctgg
     1081 cgttcctgcc agtctagggt ttgctgttcg agctgggcaa tttgctgccg gtagttttgt
     1141 ttttgctggt tgagcttgtg aacggcgact tcggccagcc cgtattggcg gttggcttcc
     1201 aacagggcaa gctgcgcctg tttcagacgg ccttgctgct cttggcggct gtgcgcggtg
     1261 gtttgctgct ggtgttcgag ttcggcggcg gcttcctgca aggtaacgat gtcgtctgaa
     1321 agcccgtcgg acgtgtgttg caacacggtc tgctcttccg ccaactgcgc cagttcgcgc
     1381 tcgatgtgtt cgcggcggat ttgcccttgg ttggtgcgcg ccagaagttc ggcggcgcgt
     1441 tgctgcgcct gactgtattg gcgtgtgtgc tgctgttgct gctgcatcag gtttttgtgc
     1501 tgcacttcgg acgagcgcac ggcggcttcc gcctgtttga acgcggcttc ggcggcggag
     1561 agttcggggg cgaggttttc cagttcggac gcgatgccgt cgaggcgcgc tttttgggca
     1621 atcaggcttt cctgcgccgg tttggcatag agcaggacgc tgaccttatc gacctgatga
     1681 ccttcgggcg tgagccagat ttggtgtgcg cccaaatcgt tttgatgcgc gagggcatag
     1741 ctcaaatcgg gcgcgcacaa tacgccgtcg agccagtggt gcaatgccgt ctgaaacggc
     1801 ggctgcgctt ggatttggtt cagcaatgcc tgtgcgggca gggatttttt gatgccgccg
     1861 gagagaccgt ctgaaagcca cgccgcctgc ccctgcggca aaggcgcggg gggaacgaaa
     1921 ccatgcggta cgctacgggc ttgcaggcgt tcggcaagga tgacggacaa ggcgtgctgc
     1981 cactcggcgg gcgcggtgat gtgttgccac agttgcggcg cggcggcgtg gtcgcttgcc
     2041 tgccagaagt cggcggcttc ctgctgttgc gacaggattt gcgacaacgc ctgctgctgc
     2101 gcctgcaagg tgatgtgttg ctgcttcagg ctttggaagc ggtttgaggc cgtctgaaac
     2161 gcctcgcggg cggcgtgtaa ggcttcttcg gcggcgatga tttgttcttc gtaatgctct
     2221 tgccggtttt gcaacagggc ggcggcttcc tgcgcggcgg cggtttcggc ttcgtcgggc
     2281 aggttcaggg cttggttttc ctgtttcaga cggcctttgc gctcttcgtg cttggcaacg
     2341 gtttgttcgg catgggcaag ctgctgctgc ttcaacgcca gttctcggcg gatgcggttt
     2401 gcctcgtcct gctgggtttg gaaggcggca ttgagcgtgg cttgggcctc ttccaattcg
     2461 ggcagacgct cttcgtgttc ggcaacctgc atcgcccatt ccgccaattc ggtttgcttt
     2521 tcttcgacct gcgactcgtt ttcttccagc ttgacgcgga tttgctgctg ctcttgatgg
     2581 atgcgctgca tctgcgcctg cgccgcctgc ttatcgcgct cgatgcgttg atgtaggttt
     2641 tgctgatggc ggatttgttc ttccaaacgg gcaatctgtt cgcgcaacac gccgcgtttg
     2701 ttgcccaatt cgtgcaccgc ctgctgctgc gactgttcgg cggtctgcaa ggcgtgtact
     2761 tcatcgttta acgcctgaac ctgcgcggcg gtttcgtcct gctgcgcctg caaagactga
     2821 tgctgcgcgg ttgccttatc tgcggcagca agcgattgct gccattgggc gtaatcgagc
     2881 aaatcctgct ggcggttcaa ctgcgcggtc aggaatttgt agcgttcggc ggtttccgct
     2941 tgtttttcca gcttttccac ctgacgcgcc aactcgttct gcaaatcgcc caaacgctgc
     3001 aaatgctcgc gcgtgtcttt cagacggcct tccgtctcct tgcggcgttc cttatatttg
     3061 gacacacctg ccgcctcctc gatataggca cgcaactcct ccggccgcgc ttcgatgatg
     3121 cgcgaaatca tcccctgctc gataacggca taaccgcgcg cacccacgcc cgtacccaaa
     3181 aataaatcgg taatgtcgcg gcggcgcacg gtctgattgt tgatgaaata agtcgattcg
     3241 ccctgacgcg tcagctgccg cttgatgctc acctcggcat actgtcccca cgcaccctgc
     3301 aaactgtggt cgctgttgtc aaacaccagc tccaccgaag ccctcggcgc aggacggcgc
     3361 gtcgccgcac cgttaaaaat cacgtcctgc atactctcgc cacgaagctg cttcgccgaa
     3421 gcctcaccca acacccagcg caccgcgtca atcacattcg acttgccgca accgttcggc
     3481 ccgataaccg cgacaagctg ccccggaaca tgaatcgtgg tcgggtcggt aaaagatttg
     3541 aagccggaga gtttgatgtg ggtcaggcgc ataatggtcg gaaaaaataa aaaagaagcg
     3601 tattttaacg gaaatcccgc cgcaccaccc catatcttgc cggcaaaacc ttaccgcatc
     3661 ccgcacccgc gatgccgtct gaagccttca gacggcattt ttaacgcgcc gaaccccggt
     3721 tccgccaatg cccgatgctt ggcgcggcat ttgccgtatt gccccgccgc cgggcgcgtt
     3781 ataatccgcc acgacatccg cccgatttgg aaacctgcct atgaaacccg cctatttcat
     3841 ttccgacctg catttgagcg aaaagcagcc cgaactgacc gcgctgttgc tgcgtttttt
     3901 acgttcttcc gccgccaggc aggcgcgggc ggtttacatt ttgggcgatt tgtttgattt
     3961 ttgggtgggc gatgacgaag tttccgagtt gaatacttcg gttgcgcgtg aaatcaggaa
     4021 attgtccgac aaaggcgttg ccgtgttctt cgtcaggggc aaccgcgact tcctgattgg
     4081 tcaggatttt tgccggcagg caggcatgac gctgctgccg gattactcgg ttttggactt
     4141 gttcggctgc aaaaccctca tctgccacgg cgacactctg tgtacggatg acagggcata
     4201 ccaacgtttc cgcaaaatcg tgcatcggaa gcggctgcaa aaactgttcc taatgctgcc
     4261 cctgaagtgg cgcacgcgcc ttgccaccaa aatcaggcgt gtcagcaaaa tggaaaaaca
     4321 ggtcaagccc gccgatatta tggatgtcaa tgccgccttt accgcgcggc aggtacgcgc
     4381 cttcggtgcg gaaaggctga tacacggaca cacccaccgc gagcatatcc atcacgaaaa
     4441 cggctttacc cgcatcgttt tgggcgactg gcataacgac tatgcttcaa tcctccgcgt
     4501 ggacggggac ggcgcggtat tcgtgccgct ggaaaaatac tgaaaatgcc gtctgaagcc
     4561 tttcgggcgg ctttttttac acgccccttt cccacactcc ctccgccgca tcatcaccat
     4621 ccttaacccg cattaatagc cattatcgat aaaatgcttg accgattaca taagattacg
     4681 taaagtgtgc aaacgcataa caattggtct taccaattta tcttttaacc aaaatatcgg
     4741 gtgtacggga tttgaacgtc tttccaaacc tcgacgcgcc ttatgatgca aatgcctaaa
     4801 aaggattcgt tatggcactt ttcctcagca tattccccat cgtcctgctg atttggctga
     4861 tggtgaaaaa aaacagtatg ccctcctacg tcgcgctgcc gattaccgca gtgctgattt
     4921 acgccatcaa acttttctac ttcgacgatg cgggcatgct gctcaacgcc accgccgctt
     4981 ccggcctcgt caaaacgctc acgccgatta ccgtgatttt cggcgcgatt atgttcaacc
     5041 gtatgatgga aaccacgggc tgcatcgatg tcatccgcaa atggctggcg accatcagcc
     5101 cgaaccccgt agcgcaactg atgattatcg gctgggcttt tgcctttatg attgaaggcg
     5161 catccggctt cggcacgcct gccgcgattg ccgcgccgat tctgatgagc ttgggcttca
     5221 acccgttgaa agtggcgatt ttcactttgg tgatgaactc cgtccccgtc tctttcggcg
     5281 cggtcggtac gccgacctgg ttcggtttcg caccgctgaa cctgagtgcc gaagacatcc
     5341 tcgccatcgg caggcagacc ggcgtaatgc acttcttcgc aggtttcgtc atccccgtca
     5401 tcggcttggg cttcatcgta ccttggtctg aaatccgcaa aaacttgggc ttcgtcgcca
     5461 ttgccgtctt ctcctgcacc attccttatg tcgcattggc gatggtcaac gaagaattcc
     5521 cgtcgctcgt cgccggcgcg atcggcctga tggtgtccgt attcgccgcc aaccaaggct
     5581 ggggcttgag caaagaccac gccaaagacc cgaatgccga aaaagtgccg ttcgcccaag
     5641 tcgccaaagc actcgcccct ttgggtatgc tgatcggcat gctggtggtt acgcgcatca
     5701 aacagctcgg tatcaaaggc attttgacca gcaaagaaga atggttcagc ttccaactgc
     5761 cgtttgattt gtccaaaatc accgtcagcg actccctgac gattaccttc ggcaatattt
     5821 tcggacaaga tgtcagcgcg tcttaccaaa cgctgtacgt cccggcttgg attccgtttg
     5881 tgctgaccgt ttggatttgc atcctgctgt ataaaaccaa attcaaagat gcctggacga
     5941 tttatgccgt aaccttcaat caaaccaaaa aaccgctgct tgccctgatg ggcgcgctga
     6001 ttatggttca gctgatgctg gtcggcggcg acaattcgat ggtgaaaatc atcggtaagg
     6061 aatttgccgc aatggcgggc gaacactggg tttatttctc gccgtatctg ggcgcgatcg
     6121 gcgcgttctt ctccggttcc aacaccgtgt ccaacctgac cttcggcccg attcagcagc
     6181 aaatcgcctt ggataccggc ctatccgtta ccctgattct ggcgttgcag tccgtcggcg
     6241 gcgcgatggg caatatggtg tgcctcaaca acatcatcgc cgtatgtacc gtattggatg
     6301 tgaaaaattc cgaaggtgcg attatcaaga aaaccgttat cccgatggcg atttacggcg
     6361 tgattgccgt cgtcgcggca atgattttct tcctctaggc gaaacgccac catccatagc
     6421 ggcagcacgc ggggaacgga aaccgccgtt ccccgtctgg gcggcgcgtc gggcagaatc
     6481 ccggtgccgg aacaagcccg ccccgccaaa caaatgccgt ctgaaaccga aaaaggcttc
     6541 agacggcatt tttccgccgt ttgcgttcag gcgtaatgat gatgcggcat cttgccgtca
     6601 aggcggtagc gcgtgccgca atacgggcag gcaacgctgc ccgattctcc ttcgcacaaa
     6661 ggcaaaaaca ctctcggatg cccgttccac tgctcgttgt cgggtcccga gcaatacagc
     6721 ggcagatttt ccggcaacac ggaaatttcc tgcagattca gattgtccat ttgattttcc
     6781 tttgcgtggt tggcgtgcgc ccattttacg ccatcggcag gctaaaggat attttcggcg
     6841 caaagccgca atccgctata atccccactt ttcagacggc ataccatgac tgcgcttacc
     6901 cttccggaag acatccgcca acaagaacca tccgttctgc tctataccct cgtttccgcc
     6961 tacctcgaac acaccgccca aaccggcgac gaatccctct cctgcctgtc cgacgaccag
     7021 cacacgctga ccgcattctg ctacctcgac agccaagtcg aagaaggcgg cttcgtgcaa
     7081 ctcatcgcct ccggttacgg cgaatatatt ttccgcaacc cgcttgccga cagcctgcgc
     7141 cgctggaaaa tcaaagccgt gccgaaagtc ttggacaaag ccaaagccct ctacgaacaa
     7201 cacggcaaaa ccatcgaaac gctcgccgac ggaggcgcag acatcgaatc cctgcgcaaa
     7261 cagttccccg actttgaaga atgggacggc gcatactacg aagccgccga acaagacctg
     7321 cccctgcttg cagaacacat acagtcaaac tgggaaacct tcgcccatat cgggcaggcg
     7381 tgattgcgtc tgtttccagc ccgtgtaaaa cagcgtaaaa tcggcaaacc cgaatgacct
     7441 tccgtcccca tcaaggagca agctatgttc ttcaagcaca tcgaagccgc ccccgccgat
     7501 ccgattctcg gtttgggcga agcgttcaaa gccgaaaccc gccccgaaaa agtcaacctc
     7561 ggcatcggcg tttataaaga cgcatccggc gcgacacccc tcgtcaaagc cgtcaaagaa
     7621 gccgaaaaac gcctgttgga aagcgaaacc accaaaaact acctcaccat cgacggcgtt
     7681 gccgactaca acgcgcaaac ccaaatcctg ctgttcggca aagaccacga aatcatcgcc
     7741 agccgtcgcg ccaaaacagc gcaaagcctc ggcggtacgg gcgcattgcg tattgcggcc
     7801 gagtttgcca aacgccagtt gaacgcgcaa accatctgga tttccaatcc gacttggccc
     7861 aaccacaacg ccatcgccaa agcggtcggt atccaagaca aaccttatcg ttactatgat
     7921 gccgccaaac acggtttgga ttgggacggc atgattgagg acttgagcca agcgcaaaaa
     7981 ggcgacatcg tcctgctgca cggctgctgc cacaatccta ccggcatcga ccctacgccc
     8041 gaacaatggg aaactttggc aaaactttct gccgaaaaag gctggttgcc gctgtttgac
     8101 tttgcctacc aaggcttcgg caatggtttg gaagaagatg cctacggctt gcgcgtgttc
     8161 ttgaaacaca atacagaatt gctgattgcc agctcttatt ccaaaaactt cggtatgtac
     8221 aacgagcgcg tcggcgcgtt cactttggtg gccgaagatg aagaaacagc agcccgcgcc
     8281 cacagccaag tcaaaaccat catccgtacc ttgtattcca acccggcttc acacggtgcg
     8341 aacaccattg cgctggtgtt gaaaaatgat gatttgaaag cacaatggat tgccgaactc
     8401 gatgaaatgc gcggccgcat caaagccatg cgccaaaaat ttgtcgagtt gctcaaagcc
     8461 aaaggtgcaa gccaaaactt tgatttcatt atcgaacaaa acggtatgtt ctctttcagc
     8521 ggcttgactc ccgaacaagt cgaccgcctg aaaaacgagt ttgccattta tgccgtccgt
     8581 tccggccgca tcaacgtcgc cggcattacc gacaacaaca tcgattatct gtgcgaaagc
     8641 atcgtgaaag tactgtaaaa agcacagcca tatgaaaatg ccgtctgaac cttaaccagt
     8701 tcagacggca tctgtttttt gttaaaaaac aataaaccat aacaatttca aacaagctaa
     8761 aaacatctat aaaatcaacc caatatgatg aactcaaata aaaaatacga atatcatcat
     8821 tctcaaattc aaaatttgaa cgccacagta ttatccgaag ccacaaaaac ctttccgccg
     8881 tcattcccgc gcaggcggga atccgggaac ccaatgctgc aagaattgat tagaaacaac
     8941 tgaaaccgag caaactggat tcccgcctgc gcgggaatga cgaaataagg cgagtaaaac
     9001 tgatgaaaca aattgattaa aaacaataac ttatattatt ttatttaaat tttcgataaa
     9061 atcaattttc cgtattcaat actgctccaa tcaattcccg cgcaccgtcg tccgccaatt
     9121 tcttagcgac agcgcgtccg agcgcgtcgg catattcggc aggggcttgc gcgtccgccc
     9181 gcaacacaac cgaaccgtcg ggatgtccga ccagtccgcg caaggtcagc aagccgtttt
     9241 cttctgtgca atatgcggcc aaaggcactt ggcagcttcc gcccaaagcg cgtgcgaggg
     9301 cgcgttcggc ggtaacgcag gcattggtaa cgccgtggtt caagggtttc aaaacttcat
     9361 acaaatcttc gcggtgcgcg gcaatttcga tacccaatgc gccttgtccg gcggcaggca
     9421 ggctctcgga ttccgacaaa atcatgcgga tgcgtccgtc caattctaaa cgctgcaaac
     9481 cggcggcggc caagataatt gcatcgtatt cgccgttatc gagtttggac aaacgggttt
     9541 gcacattgcc gcgcaaaggt ttgataagca aatgcggata gcgcgcacgc aactgggctt
     9601 cgcggcgcag gctggatgtg ccaacaaccg cgccttcggg catttcttcc aaacgcgtgt
     9661 attggttgga cacaaatgcg tcaaacggat tggcgcgttc gccgatggcc gcaagcgcga
     9721 aaccttcagg caaatccatc ggtacgtctt taatcgaatg caccgccaaa tcggcgcgcc
     9781 cgtcatataa agcctgttcc aactctttga caaacaagcc tttaccgccg acttttgaca
     9841 aagttttgtc caaaatctga tcgccgcgcg tggtcatgcc caaaatctcg acttcgcaat
     9901 cgggatacag agccttcaga cggccttgga tatgctttgc ctgccacata gcaagcaggc
     9961 tttcgcggct ggcgatgacg agttttttcg ggttcatgtt caatgcgttc aaagaatgga
    10021 aacggcgtga agtctatcat attttgaacg tttcttcaga cgacaccgtc aggtctatgt
    10081 tatatttaca cccacaaaac acgaaacccg ccacaatgaa acgcaccaaa aaataccctt
    10141 tcttaacgtt gcagcggcaa cgtttccatt tgaactttga aaacgcctct tccgccgccg
    10201 gcatcccagc cgaacgcgat ttctaccgct gggcgtggtc tgccttgaaa aatgaatacc
    10261 gccgcgccga catcagcctg attcttctgg acgaagaaga agcccgagcc tacaaccgcg
    10321 actaccgcgg caaagattac gccaccaatg tattgagttt cgcgctcaac gaaggcgaaa
    10381 tcctgccctg ccaagtttcg gaaaaactgt acggcgattt gattatctgc ccgcaagtcg
    10441 ttttaaaaga agccgccgaa cagggcaaaa cgcccgaacg gcattttgcc cacctgacca
    10501 tacacggtac tttacacctg atgggctacg accacatcga agacgacgaa gccgaaataa
    10561 tggaagccga agaaatccgc ctgatgctgg cggcaggctt ccccaacccc taccaagagg
    10621 acgaatatta aaatggacgg tacgcagtcg aaacccaagt ttttcgaacg cctgatctcc
    10681 cgacttgccg gcgagcccga ctccgccgaa gacgtattga ccctgctgcg ccaagcgcac
    10741 gagcaggaag tttttgatgc ggatacgctt ttaaggttgg aaaaagtcct cgatttttcc
    10801 gatttggaag tgcgcgatgc catgattacg cgcagccgta tgaacgtttt aaaagaaaac
    10861 gacagcatcg agcgcatcac cgcctacgtt atcgataccg cccattcgcg cttccccgtc
    10921 atcggcgaag acaaagacga agttttgggc attttgcacg ccaaagacct gctcaaatat
    10981 atgtttaacc ccgagcagtt ccacctcaaa tccattctcc gccccgccgt cttcgtcccc
    11041 gaaggcaaat cgctgaccgc ccttttaaaa gagttccgcg aacagcgcaa ccatatggcg
    11101 attgtcatcg acgaatacgg cggcacatcc ggcttggtca cctttgaaga catcatcgag
    11161 caaatcgtcg gcgaaatcga agacgagttt gacgaagacg atagcgccga caatatccat
    11221 gccgtttctt ccgaacgctg gcgcatccat gcagctaccg aaatcgaaga catcaacacc
    11281 ttcttcggca cggaatacag cagcgaagaa gccgacacca ttggcggcct ggtcattcaa
    11341 gagttgggac atctgcccgt gcgcggcgaa aaagtcctta tcggcggttt gcagttcacc
    11401 gtcgcacgcg ccgacaaccg ccgcctgcat acgctgatgg cgacccgcgt gaagtaagca
    11461 ccgccgtttc tgcacagttt aggatgacgg tacgggcgtt ttctgtttca atccgcccca
    11521 tccgccaaac ataaaaatgc cgtctgaaac cgttgcaagt ttcagacggc atttcgctta
    11581 tccgcttatt ttttgctcaa agtcagcccc gtccaaccga ataacagggt caaagccaaa
    11641 ctcaaatagc agaaaaaggc atacggcaga tattcccaaa ccggcacgcc cagcgcgtgg
    11701 ctgatgaaca cgccgcatac gctccacggt acgagcgggt taatcaccgt ccccgcatct
    11761 tccagcgtcc gcgacagatt gcgggaatgt agtccgagcc tgtcgtaaac gggtttaaac
    11821 gtttctccag aaagcaggat gctcaaatat tgttcgccaa tcaggaaatt aaccccgacc
    11881 gaagtcatgg caacgctgaa cgtcgcgcgt ccggcattcg tcaagaaggt acggatggcc
    11941 tccaacaggg aaggaatcac accgagcgca aacaacagtc cgcccaaact catcccgaga
    12001 atcacgatgg tttgcgtgaa aaacatactt tccaaaccgc cgcgcgaaat cagtttgaca
    12061 acatctttaa acgcttcgcc ttcgagtttg tagccgccgt aaaaccacgc accgagctga
    12121 cgcagatcgg gcgtgctgtg cagatacgtt acagcaacgg caaccatgac ggtaaagagc
    12181 atggcgacga cggcgttgat gcgcatcaat gccaaaatga ccaacagcgc aaacggaatc
    12241 agcgaatagc cgtgcaccaa tcccgtggct tcaagctggc tgcggaagga ttcgacgctg
    12301 ttcaaatcct gcgcggcgac attcggcaaa agccaaagca tcagtgccgc actaatgagc
    12361 cacgcgggga tggtggtgta catcatattt ttgatgtgct caaacaagtc gatgccgacg
    12421 atggacgcgg aaatacccgt cgtatccgaa agcggggaca ttttgtcgcc aaaaaatgcg
    12481 cccgaaacaa tcgcgcccgc cgtcatcgcc atatcggcct gaaacgccgc cgccatcccc
    12541 ataaaggcaa cgccgacagt ggcgcaggtg gtcaggctgc tgccgatgga cacgccgatg
    12601 acggaacaca gcgcgaaggc ggaaaaataa aaataagtcg gggaaatcag tccgaaaccg
    12661 taatacatca gcgtcggaat cgcgccgctc atcatcagcg cgctgaccat cagcccgatg
    12721 aagaaaaaca ggtaaatcgc gcccataccc tgattcaacg cgcctatcat gccctgctgc
    12781 atatcgttgt atttcaaacc gcgcaccaag ccgtacaaaa tcagcacgac gatggcggca
    12841 ataatggaca tatgcggcag ccactccaat gaaatgatgg tatagcccat cgcggcaatc
    12901 agagcgacga cgacggcaag tgcctcaccg cgcggcatat cgagtaagga tttgaaagca
    12961 aacatgattc tttgcccgat ttgatataaa gttaacggat tctaacacac cataccgaat
    13021 ccgcccaacg ttttcagacg gcattttagc gttttacaaa agccggacag aaacaaaacg
    13081 gcaattttct caatttaaat taattttttt gaaatataat tttttatttt tttgtttgtt
    13141 ggcatataag acttttatgg attgaagtat taaaacctcg gcacacatgc cgcaaacacc
    13201 ggtacgcaaa aatgccgtct gaaagatgtt cagacggcat ttctcaagaa aaagattatt
    13261 tgtccgccct atatccgtac accgcaaaaa acacgatata cagataacag atgacggaaa
    13321 cgacaaacga agacatcagg gtgtaagtat ctgccaccca gccctgcacg acaggaacga
    13381 ccgcaccgcc gacaatcgcg gtacacagta caccggaagc cgcgttggta aattttccca
    13441 atcctttggt tgccaaagag aaaatcgtcg ggaacataat cgagttgaaa aaaccgatgg
    13501 caagcagcga ccacatcgcc acatccgcat tgccgctgcc cgtcgccatc gcgacggcaa
    13561 gcagtacgac cgcagccgat gcgttaaacg ccaaataacg gttgggcgcg aatttcgcca
    13621 tcaccgccga accgaggaaa cgtccgacca tcgcgccgcc ccaatagaac gacaggtaat
    13681 gcgcggcaga agcatgatcc agccctttca gataacccaa tacgttgacc atcaacgaac
    13741 cgatagacac ctccgcgccg acatagcaga aaatgcctgc cgtaccgaac acgagatgtt
    13801 tgtattgcca tacgctggtt ttgccgtcgt ggttgtgcgc gctttcctcg gcggcaattt
    13861 tgcgcgcgtc gggcagccgg atcattttca cgaaaacggc aaggataatc agcagccccg
    13921 ccagtcccaa atagggaatc tgtacggaag aaatctgttc cgccttgctg acggtttggg
    13981 ttgcgtccgc cagaatcagg aacgcgccga tttgcggcgc aatggtcgta cccaaagcgt
    14041 taaacgcctg aaccagcgtc agtgttgccg attccttgcc gggtttcgcc agcagggtaa
    14101 cataaggatt accggcgacc tgaagcagcg ttacgccgga agccaaaata aacaacgcgc
    14161 ccaaaaatac cgcgtaagaa tggctacccg cagcaggata aaacagcagg catccgaccg
    14221 ccgtcagcag aaagccgccg ataacgccgt ttttgtagcc gactttgccg acaaaagccc
    14281 ccatcgggat ggacatcacc gcataggcgg taaagaaaca gaattggatc agcatcgcct
    14341 gaacgtaaga caggtcgaaa atttctttca aatgagggat aaggatgtcg ttcatgcagg
    14401 taataaaacc catcatgaag aacagcgtgg tcaagacgac caatggggac gtatgattgt
    14461 tttgtgattg cgcagacatg atttgccttt cgtggtgtcg gaatattacc cgtttcaaga
    14521 aaatagaaat tgacatttct taacggcaat gcaaatcata ctgatatttg aacattttgc
    14581 aaactttatc ggatgcaggc aatgcgccga tctgaaattc aagcagcaga aattaatatt
    14641 ttacagttgc ttgcatagat tttaatagat tttaaaaaat tccggcggac ttgcaaaaac
    14701 cgttcccaat aaaatgaaaa tccgccgccg tatccggaaa attcggaaat gccgcatcgt
    14761 ggcatcaaaa ccggagcgga aagaatgtcg tatgcccgac aaaaaagggg catacggctg
    14821 tgccgtattt tttgcaccgt cctccgccct tcggcggggg cgtgaaaata
//
LOCUS       DAXHRP010000036        14461 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.036, whole genome shotgun sequence.
ACCESSION   DAXHRP010000036 DAXHRP010000000
VERSION     DAXHRP010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14461
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.036"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(42..971)
                     /locus_tag="ACFM72_000805"
     CDS             complement(42..971)
                     /locus_tag="ACFM72_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC6257401.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAERDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNGIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAAFPYWTVMPYLEKGYVVHRQITDDGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1102..1851
                     /locus_tag="ACFM72_000806"
     CDS             1102..1851
                     /locus_tag="ACFM72_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HFC6257402.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            1974..2555
                     /gene="petA"
                     /locus_tag="ACFM72_000807"
     CDS             1974..2555
                     /gene="petA"
                     /locus_tag="ACFM72_000807"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HFC6257403.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2574..3923
                     /locus_tag="ACFM72_000808"
     CDS             2574..3923
                     /locus_tag="ACFM72_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HFC6257404.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            3938..4726
                     /locus_tag="ACFM72_000809"
     CDS             3938..4726
                     /locus_tag="ACFM72_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HFC6257405.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5065..6849
                     /gene="rmuC"
                     /locus_tag="ACFM72_000810"
     CDS             5065..6849
                     /gene="rmuC"
                     /locus_tag="ACFM72_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HFC6257406.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYTVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQHDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYAAEDEAV"
     gene            complement(7056..7688)
                     /locus_tag="ACFM72_000811"
     CDS             complement(7056..7688)
                     /locus_tag="ACFM72_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFC6257407.1"
                     /translation="MTLRYEILSVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNHWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7779..8603
                     /locus_tag="ACFM72_000812"
     CDS             7779..8603
                     /locus_tag="ACFM72_000812"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HFC6257408.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRYGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRVRTDR"
     gene            8672..9235
                     /locus_tag="ACFM72_000813"
     CDS             8672..9235
                     /locus_tag="ACFM72_000813"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HFC6257409.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9316..9753
                     /locus_tag="ACFM72_000814"
     CDS             9316..9753
                     /locus_tag="ACFM72_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HFC6257410.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            9822..10091
                     /locus_tag="ACFM72_000815"
     CDS             9822..10091
                     /locus_tag="ACFM72_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HFC6257411.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10091..11866
                     /gene="ptsP"
                     /locus_tag="ACFM72_000816"
     CDS             10091..11866
                     /gene="ptsP"
                     /locus_tag="ACFM72_000816"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HFC6257412.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIAKVIRCEDE
                     EKSEKLIKQMNSVSVEEEADFKGRK"
     gene            complement(12512..13450)
                     /locus_tag="ACFM72_000817"
     CDS             complement(12512..13450)
                     /locus_tag="ACFM72_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC6257413.1"
                     /translation="MLELNGLCKRFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIQLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEVHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRGTLRRMTAERIRNGGIPAVLVTHSPEEACTAADEIAVMHGGRILQYGTPET
                     LVKTPSCVQVARLMGLPNTNDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(13459..14334)
                     /locus_tag="ACFM72_000818"
     CDS             complement(13459..14334)
                     /locus_tag="ACFM72_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC6257414.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNILFSLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNIAAGGVSSGELPSEAVCRESSEEAGLDQTLFPLIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
BASE COUNT         3464 a         3691 c         4054 g         3252 t
ORIGIN      
        1 tgaaaaaata gaaaaactgc cgggtatggt tgaataaggg gtcagaccgg ttccagttcg
       61 ctcagtccgg gcaaatctgc aaaaccgcgt tcgcgtatga tttggcaaaa gttgttcaga
      121 taacttttat ctgtgtcttc agtgcggatg gcggcataca gtttgctttg cagtccgtcg
      181 tcggtaatct gccggtgaac gacatagcct ttttcaaggt agggcatgac tgtccaatag
      241 ggaaaggcgg caatgccacg tctgctggca accagttgga taatggcgat ggtcagttcg
      301 ctgtgtcggc gcggcgggtt gatgtttttc ggaatcagga tttttttggg caaatccagc
      361 atctcgtcgg gaacgggata ggtaatcagg gtttccccga taaagtcttc cgccgtccaa
      421 acgtttttgg cggcaagcgg atggtccggt gcgcaaatgc cgaccatttc gtaggcaaac
      481 agcggttgga aagaaatacc gttttgtttt tccgcttcgg aaacaatggc aagatcggcg
      541 cggtgttgca gcagcagccc gacgggatcc gcttggaatc ccgatacgat atccagttcg
      601 acttggggcc acatcgggcg gaattcgccc atggcgggca tcagccagtc gaaacaggta
      661 tggcattcga cggcaatccg cagctctccc gcctcccctt ccgtgattcg cgccaaatct
      721 cgttctgcaa cagcaacttg aggtatcagt tcgtgggcga ggcgcagcag cctttcgccc
      781 accggggtaa agcgcaaggg cgtggatttt cgttcgaaca acggtgcgcc gtagtggttt
      841 tcaagcatac ggatttggtg ggaaagtgca gattgggtaa ggaaaacccg tttggcggca
      901 agggagacgc tgccggtttc ttcaagtgcc agcagggtct tgaggtggcg cagttcgata
      961 atggaatcca tggggcttca gacggcatat tgaaccggcg catattaaaa taattcatat
     1021 gcgggtgcaa atcggaaaaa tgtgaattcc ggacattttg cgattagaat gcccgcttgt
     1081 ttaaagcgat taggaaaaaa gatggtattg cgcagggatt ttctgacttg gtgtaatgaa
     1141 acattgcaga cagcgttgtt taaagattac gcccctaacg gtttgcaggt tgaagggagg
     1201 gaatatatag ggaaaatcgt tacgtcggta acggcaagca gggcagcgat tgattttgct
     1261 gtggagcaga aggcagattt gcttttggta catcacggta tgttctggaa aaacgagttg
     1321 ccgaccgtta ctggttggaa aaaagaacgg attgccgcac tgttacggca cgacatcaat
     1381 atggcaggct accatctgcc cctggatgca catcccacac tgggcaacaa tgcccaactc
     1441 gccgacagat tgggttttgc gacagaaaaa cggttcggcg aacaaaacct gctcaactcg
     1501 ggcagcctga aacaagccaa gacactcggc gcattggcgg cgcatattga aacagttttg
     1561 caacgtaagc ctgtcgtcat cggcaaaccc gaacgcgaaa tccgacgggt tgcatggtgc
     1621 agcggcgggg cgcaggggtt ttttcagacg gcaatagacg aaggtgtcga tctgtatttg
     1681 acgggggaaa tctctgaagc tcaataccac cttgccaatg aaacgggtac ggctttcatt
     1741 tcggcagggc atcacgcgac ggaacgttac ggcgtacgcg cgctggcaga atcggcggca
     1801 gaggttttcg ggttggaagt gtgccatttt gacgaaaaca atccggcttg agtcttgaga
     1861 aatatcataa aactttacct tattttaaat aatgctttga gtatcactgc aaactgggta
     1921 aaattgcaac gtttaatggc tcggtattcc caaaatatta ggacgactga ataatggata
     1981 atcaagaaat caacaacggc cgccgccgtt tcctgacact cgcgacctgc ggcgcgggcg
     2041 gagtggcagc attgggtgtg gcaacgccgt ttgtggccag ttttttccct tcggaaaaag
     2101 ccaaggccgc cggtgctgcc gtcgaggtgg atgtcagtaa aatcgaagcg ggtcagctgc
     2161 tgaccgccga gtggcaaggc aaaccgattt gggtgctcaa ccgtacagat cagcagctta
     2221 aagacctgaa aggcctgaac ggcgaactta ccgatcccaa ttccgatgcg gaacagcagc
     2281 cggagtatgc taaaaacgag acccgttcga ttaagccgaa catccttgtc gccatcggta
     2341 tctgcaccca tttgggctgc tcgcccacct tccgtcccga cattgccccc gccgatttgg
     2401 gtgcagactg gaaaggcggc ttcttctgcc cctgccacgg ttcgaaattc gacttggccg
     2461 gccgcgtata taaaggtgtt cctgccccga ccaacctggt tgtcccgcca tataaatact
     2521 tgagcgacac aactatcttg gtgggcgaag actaagaata aggaacgata attatggcaa
     2581 accaaaccaa tagcaaagca aaagcattgt taggctggat ggacgctcgt ttccccctgt
     2641 ctaaaatgtg gaatgagcat ttggctcaat actacgcacc gaaaaacttt aatttttggt
     2701 actacttcgg ctctttggcc ctgcttgtcc tcgtgattca aatcgtcagc ggcattttcc
     2761 tgaccatgaa ctacaaaccc gacggcaacc tgaacgccta ccatctgcct gctgccttta
     2821 ctgcagtcga gtacatcatg cgcgacgtgt ccggcggttg gattatccgc tacatgcatt
     2881 ccaccggcgc atctttcttc ttcattgttg tttatctgca catgttccgt ggtttgattt
     2941 acggttcgta caaaaaaccc cgtgagttgg tgtggatttt cggttctctg attttcttgg
     3001 cattgatggc ggaagccttt atgggctacc tgctgccttg gggtcagatg tccttttggg
     3061 gggcgcaggt aattattaac ctgttctccg ccatccctgt tatcggtccg gatttgtcca
     3121 cttggattcg cggcgacttc aacgtttccg acgttaccct gaaccgtttc tttgccctgc
     3181 acgttatcgc ggtacctctg gtattgctcg gcttggttgt ggcgcacatc atcgccctgc
     3241 acgaagtggg ttctaacaac cctgacggcg ttgaaatcaa gaaaaacaaa gacgaaaacg
     3301 gtatcccgcg cgacggtatc ccattccatc cttactatac cgttaaagac atcttgggtg
     3361 tggttgtatt cctgattgtc ttctgtgccg tattgttctt cgcaccggaa ggcggcggct
     3421 acttcctcga agcgccgaac ttcgatgcgg caaatgcgct gaaaacaccc ccgcacattg
     3481 cgccggtatg gtatttcaca ccgttctacg ccattttgcg tgcgattccc tcgttcttgg
     3541 gaacgcaggt ttggggtgta atcggtatgg gcgcggcggt cgtgttgatt gccctgctgc
     3601 cttggctgga taggggcgag gtgaaatccg tccgttaccg cggtccgatt ttcaaaaccg
     3661 cattggtctt gttcatcatt tcctttatcg gtttgggtat tttgggcgcg atggtggcaa
     3721 ccgatacgcg tactttggtc gcgcgcatcc tgtccttcgt ctatttcgca ttcttcctgg
     3781 gtatgccgtt ctataccaag ctggataaaa acaaaccggt tcccgaacgc gtaaccatga
     3841 gcaccgccaa acaaaaaatc atgttctttg tttacgtcgg cattaccgcc gtgggtgctt
     3901 acctgtttgc aaccaacatc tgatgagggc agtcaaaatg aaacaagcta tgaaaaattg
     3961 gtttgctgcc ttgctgttgg cagtacccat gggtgcggca tttgcttcgg gcggtcatgc
     4021 acactatgag aaagtcgata tcgatttgcg cgaccaagtc agcctgcagc gcggcgcaca
     4081 aatctttacc aactattgcc tgtcctgcca ctcggcaagc ggtatgcgtt tcaaccgttt
     4141 gaaagacatc ggtttgactg acgaagaaat caagaaaaac ctgatgttta ccaccgataa
     4201 tgtcggcgat gtcatgcatt cggcgatgaa cccgaaagat gcggcaaaat ggtttggtgc
     4261 tgctccgccc gatttgacat tgattgcgcg ttccaaaggt gcagactacc tttacgctta
     4321 tatgcgcggc ttctataaag atccgacccg tccgagcggc tggaacaata ctgtattcga
     4381 taaagtcggt atgccccacc cgttgtggga acagcaaggc gttcaagccg ttgagttgga
     4441 tgccaaaggt cagccggtta tggtaaaaga cgaacacggc gagatgaagc ctaagctgta
     4501 ttgggaatct accggtttgc acagccgccg tctgcctaac ggcaaagtga tccaaaaaga
     4561 gtacgacgca tatgtacgcg atttggtcaa ttaccttgtg tacatgggcg aacctgcaca
     4621 actgcaacgc aaacgtatag gctatgtcgt gatgattttc ctatttgcgg ttatgctgcc
     4681 tttggcgtat ttcctgaaaa aagaatattg gaaagacgta cactaagcgt ttggaacaaa
     4741 agggcaaatc ctttagggtt tgcccttttt tcattttgcc tgccgtttga aaagcctaaa
     4801 tccgtatgcc gtctgaacat agctgcaaca tttcagacgg catcattcta aaaatgtcag
     4861 acatcgggaa cttaatcagg gtttgtggca gattgatatt gaattaggaa aaggtctgaa
     4921 accgcaagca gcatggtaag gcgatgtcga acaggtttaa agccaatccg ctatattttt
     4981 tggagctatg tcgaacaaac aggtagaatc ggaataagcg gcggttttgt ccggtgtgaa
     5041 aatgtttgaa tattaggatg attgatggaa ctgatgactg ttttgctgcc tttggcggcg
     5101 ttggtgtcgg gcgtgttgtt tacatggttg ctgatgaagg gcaggtttca gggcgagttt
     5161 gccgatttga acgcgcaact ggcggaaaag gcggcaagat gtgattttgt cgaacaggca
     5221 cacgcagaaa ttgcatcgga attggccgtt ttggacggga aataccgaca tttgcaggac
     5281 gaaaattatg ctttgggcaa ccgtttttcc gcagccgaaa agcagattgc ccatttgcag
     5341 gaaaaagagg cggaatcggt tcggctgaag cagtcgtata tcgagttgca ggaaaaggca
     5401 cagggtttgg cggttgaaaa cgaacgtttg gcaacgcagc tcggacagga acggaaggcg
     5461 tttgccgacc aatatgcctt ggaacgccaa atccgccaaa gaatcgaaac cgatttggaa
     5521 gaaagccgcc aaactgtccg cgacgtgcaa aacgaccttg ccgatgtcgg caaccgtttt
     5581 gccgcagccg aaaaacagat tgcccatttg caggaaaaag aggcggaagc ggagcggttg
     5641 aggcagtcgc ataccgagtt gcaggaaaag gcacagggtt tggcggttga aaacgaacgt
     5701 ttggcaacgc aaatcgaaca ggaacgcctt gcttctgaag agaagctgtc cttgctgggc
     5761 gaggcgcgca agagtttgag cgatcagttt caaaatcttg ccaacacgat tttggaagaa
     5821 aaaagccgcc gttttaccga gcagaaccgc gagcagctcc atcaggtttt gaacccgcta
     5881 aacgaacgca tccacggttt cggcgagttg gtcaagcaaa cctatgataa agaatcgcgc
     5941 gagcggctga cgttggaaaa cgaattgaaa cggcttcagg ggttgaacgc gcagctgcac
     6001 agcgaggcaa aggccctgac caacgcgctg accggtacgc agaataaggt tcagggcaat
     6061 tggggcgaga tgattctgga aacggtttta gaaaattccg gcctccagaa gggacgggaa
     6121 tatacggttc aggcagcatc tgtccgtaag gaggaagacg gcggcacgcg ccgcctccag
     6181 cccgacgttt tggtcaacct gcccgacaac aagcagattg tgattgactc caaggtctcg
     6241 ctgacagctt atgtgcgcta cacgcaggcg gcggatgcgg atacggcggc acgcgaactg
     6301 gcggcacacg ttgccagcat ccgtgcacac atgaaaggct tgtcgctgaa ggattacacc
     6361 gatttggaag gtgtaaacac attggatttc gtctttatgt ttatccctgt cgaaccggcc
     6421 tacctgctgg cgttgcagca tgacgcggga ttgttccaag agtgtttcga caaacggatt
     6481 atgctggtcg gccccagtac gctgctggcg actttgagga cggtggcgaa tatttggcgc
     6541 aacgaacagc aaaatcagaa cgcgctggcg attgcggatg aaggtggcaa gctgtacgac
     6601 aagtttgtcg gcttcgtaca gacgctcgaa agtgtcggca aaggcatcga tcaggcgcaa
     6661 aacagctttc agacggcatt caagcaactt gccgaagggc gcgggaatct ggtcggccgc
     6721 gccgagaaac tgcgtctgtt gggtgtgaag gcaaacaagc agcttgcacg cgatttgacc
     6781 gaacgtgcca atgaaacaac ggcgttgtcg gaatctttgg aatatgcggc agaagatgaa
     6841 gcagtctgac ttgtgcggaa aaatattgtt tcagcagggg cgggaatgcc gaaagcgcgg
     6901 cgtaactgta ccggttctga tttggggttg gtttgaagta cttaccaaag ccttgtccgg
     6961 cgaggtacac cggcaaggcg gcggttgtct gagccttttg cgtttcagac ggcatcagtg
     7021 cagatgacgc cgtctgaaga ccgtagtgaa gtcggttaga aaaacggatt gtgccgtttt
     7081 tcgtgtccga tggaagtcat acgcccgtgt ccggcgacaa cttgcacggt ttcggggagg
     7141 gcgaataatt tgttgcggat attattgatt aagtcggcgt ggttgccgcg cggaaaatcg
     7201 gttctgccta tggtttcgta aaacagcacg tcgcccgcaa tcagcagctc cgcttcggca
     7261 caatagaaaa ccacgtgtcc cggcgtgtgc cccggaatat gcagcacttg gaaggcgtag
     7321 cgtccgactt tgagcgtttc gccttcttcg agccaatggt tcggcgcaaa ggcgggcgag
     7381 acggggaatc cgtattgcgc ggtggtttgc ggcagcgatt ggagcaggaa ttcatcgtcc
     7441 ggatgcggcc cgaggacagg gactttatgc gttttcaaca tttcgaccac gccgcccgcg
     7501 tgatcgagat ggccgtgcgt cagccagatt gccgtgagcg taagtttgcg gtttgccaac
     7561 gcttgcagca ggaacggcac gtcgccgccg acatcggtca ggacggcttc gccgctttcg
     7621 tcgtcccaaa tcagggtgca gttttggcgg aagggggtaa cggagaggat ttcgtaacgt
     7681 agggtcatgg cgtgttccta aacggttttt cagacggcat cgggtttgcc gtttgtttta
     7741 tggcggtttg ccgcctgttt tgatattggg ggaatcagat gattaagaag acaatcggcg
     7801 gcatcatacc gatttttacg gcggttttca tccctgcatc agcaggcgcg gcggatttga
     7861 tgctggcgca ggaatacaaa gaccaagaga ttgcaggctg ggcaatgagc gagaaactcg
     7921 acggcgtgcg cgcctattgg gacggaaagc acctgataag ccgtcagggc tacgcgttta
     7981 cgccccccaa aggctttacc gcgcagtttc cgccttatcc tttggacggc gaattgtata
     8041 gcggacgcgg tcagttcgag cagatttccg ctaccgtgcg ttctgtttct tcagactggc
     8101 gcggtatccg cctgcacgtt ttcgatgtac ccaaggcgca gggcaatctc taccaacgtt
     8161 tggcagtcgc aacgcagtgg ctgaaaacgc atccgaacgc gccgattacc atcatcccac
     8221 aaatcaaagt gcgcgaccgg cagcacgcga tggacttttt aaaacaaatc gaagcgcagg
     8281 gcggcgaagg cgtgatgctg cgtcagcccg aatcccgtta cagcggcggc aggagcagcc
     8341 aattattgaa gctgaaaagc caatacgacg acgaatgcac ggtaacgcgg cactatgagg
     8401 gcaaagggcg aaacgccgga cggttgggcg cggtcggctg caaaaaccgg tacggcgaat
     8461 tccgcattgg cagcggcttc aaagataaag accgagacaa cccgcccaaa atcggcacac
     8521 tgattaccta ccgctaccgt ggctttacgc agaaaggcac gccgaaattc gccacgtttg
     8581 tgcgcgtgcg taccgaccgc tgagcaggac agttcagacg gcatccgata ctttggttta
     8641 taattttcct tttaccgacc gattccgaca tatgaccgat ttagaaacca aacgccttga
     8701 aacacaggcg atgcttgaaa acgccgatct tttgttcgac caaggccaat gccgtgccgc
     8761 actgcaaaaa gtggcggacg agattacgcg cgatttgggc ggcaaatatc cgctgctgct
     8821 gcccgtgatg ggcggcgcgg tggtgtttac ggggcagttg ctgccgctgt tgcgttttcc
     8881 cttagatttt gattatgttc acgtttcccg ttacggcgac aagctggagg gcggcgcgtt
     8941 caactggaag cgtatgcccg atgcggaaca aatccggggc aggcacgtcg tcgtgctgga
     9001 cgatattttg gacgaagggc atacgatgtc cgccattcaa gccaaacttt tggaaatggg
     9061 tgcggcaagc tgccgtgcgg cggtgttcgc caacaagctg attgacaaac ccaagcctat
     9121 ccgagccgat tatgtcggac tggatgtgcc gaaccgttat gttttcggtt acggcatgga
     9181 tgcggcgggc tgctggcgca atctgggcga gatttacgca ttggacggaa aataaggacg
     9241 cgatgccgtc tgaaggcctt tcagacggca tcgcgcccat acgccggtag gacaacgagg
     9301 aacaggacgc ataatatgat agggctttta atcatcacac acgaaaccat aggcgaagcc
     9361 taccgcaagc tggcacatca tttttttccg ggcggactgc ctgaaaacgt ccgcatactc
     9421 ggcgtgcaac cgacggaaga ccaagacgat atcatcaaca acgccattgc cgcgcttcag
     9481 gagtttcccg acaacgacgg cgtgctaatt atgaccgata ttttcggcgc gaccccctgc
     9541 aatgcagccc gccgcctcgt gcgcgaaaac aaatcggcga ttttgaccgg gctgaacgcg
     9601 ccgatgatgg ttaaggccgt ccaatattcg ccggcggcgg aagaccttgc cgcctttacc
     9661 gaatgcgtca gggaggcggc ggtaaaaggc attttcgcca tcacgtccgc gcccgaagat
     9721 ttggtgtgcc ggcgcagcgg cgatgccgtc tgaagaagcg gcagggcagg aaaacatttt
     9781 aaacggtgtc tgctgccgat atacataaca cgggaatcga aatgctcaaa caatccatcg
     9841 aaatcatcaa caaactcgga ctccacgccc gcgcgtccaa caagttcacc caaaccgcgt
     9901 cccaattcaa aagcgaagtc tgggttacga aaaacgacag ccgcgtcaac ggcaaaagca
     9961 ttatggggct gatgatgctc gccgccgcca agggtacggt catcgaactg gagacggacg
    10021 gcgcggacga ggcggaagcg atgcgcgccc tgaccgactt aatcaacggc tacttcggcg
    10081 agggcgaata atgagtatcg tgctgcacgg cgtggcggcg ggcaaaggca ttgccgtcgg
    10141 ttgcgcccac ctgattgcgc gcggtacgga ggaagtgccg cagtatgatg ttgcggaggc
    10201 ggacaccgat gccgaagccg aacgtttcga tgccgccgtc aaagccacgc gcaaagagtt
    10261 ggaacagctc cgcagcgcga ttcccgaaaa cgccccgacc gagttgggcg cgttcatctc
    10321 gctgcacctg atgctcttga ccgatgttac cttgtcgcgc gaacccgtcg atattttaag
    10381 ggaacaaaaa atcaacgccg agtgggcatt gaagcagcag agcgacaaac tcgccgccca
    10441 attcgacaat atggacgatg cctatttgcg cgaacgcaag caggatatgc tgcaagtcgt
    10501 ccgccgcatc cacaacaacc tgatcgggca gggcaacgag ttggaagttg ccgacaacct
    10561 gtttgacgaa accgttctga ttgcaaacga cctttcgccc gccgacacgg ttttgtttaa
    10621 agagcagcgc attgccgctt tcgttaccga tgccggcggc cccaccgggc atacggcgat
    10681 tttgggcagg agcttggaca tcccgtccgt cgtcgggctg cacaacgcgc gcaaactgat
    10741 taccgaaggc gaaacggtca ttgtggacgg tatcaacggc gtgttgatta tcgcgccgga
    10801 tgagtcggtg ttgaacgaat accgccgccg tgcccgcgaa taccgcagcc acaaacgcga
    10861 tttgaacaag ctcaaaaaaa ccgccgccgc caccgccgac ggggtctgca tcgagcttgt
    10921 gggcaatata gaatccgccg aagacgtgaa accgctgcac aacctcggcg cagacggcat
    10981 cgggctgttc cgcagcgagt ttctttacct gaaccgcgat acgatgccgt ctgaagacga
    11041 gcagtacgaa gtgtacagcg cgattgtcaa aaaaatgaaa ggcaaaagcg taacgatacg
    11101 gacagtcgat ttgggtgtgg acaaaaaccc gcgctggttc gggaaaaaca gcacgcccaa
    11161 cggcagcctc aaccccgcgc tgggcatgac cggcatccgc ctgtgccttg ccgaaccggt
    11221 catgttccgc acccagatgc gcgccatcct ccgtgcggcg gtacacggtc ccgtccgcat
    11281 gatgtggccg atgattacct ccgtatccga agtgcgccag tgcctcatcc acctcgacac
    11341 cgcgcaacgc cagcttgccg aacgcggcga tgccttcggt aaagtcggca tcggctgtat
    11401 gattgaaatt ccgtctgccg cgctgaccgt cggcagtatt ttgaaactgg tcgatttcat
    11461 ctccgtcggt accaacgacc tgattcaata catcttgtcc gtcgatcgcg gcgacgacag
    11521 cgtcagccat ctctaccagc ccggccatcc cgccgtgctg aaaatgctgc aacacgtcat
    11581 ccgtaccgcc aaccgcatgg acaaagacgt atccgtatgc ggcgagatgg cgggcgatac
    11641 cgcgtttacc cgcgttttat tgggtatggg gctgcgccgt ttttccatga accccaacaa
    11701 catcctgccc gtcaaaaaca tcattctgca cagcaatgtc ggacagctcg aaagcgatat
    11761 tgcgaaagtc atccgctgcg aagacgaaga gaagtcggaa aagctgatca aacagatgaa
    11821 cagcgtgtct gtcgaggaag aagccgactt caaggggcgg aaataaatac ggcaggtaaa
    11881 aaatagaaat acttaacaat gcccgcaatc tgaaattttg ccattcttgc aaaatagaaa
    11941 accgaaacag aaacccaaaa tcggccattc cctcaaaaac agaaaaccaa aatcagaaac
    12001 ctaaaacccc gtcattcccg cgcaggcggg aatctaggtt tgtcggcaca gaaacttgtc
    12061 gggaaaaacg gtttctttag attttacgtt ttggattccc gcctgcgcgg gaatgacgat
    12121 gaaaagattg ttgtcgcttc ggataaattt ttgccgtgtt gggttctaga ttcccgcttt
    12181 tgcgggaatg acggcagggt ggtttcagtt gctcccgata aatgccgcca tctcaagtct
    12241 cgtcattccc tcaaaaacag aaaaccaaaa tcagaaacct aaaatccgtc attcccgcgc
    12301 aggcgggaat ctaggtctgt cggcacggaa acttatcggg aaaaacggtt tctttagatt
    12361 ttatgttcta gattcccgct tttgcgggaa tgacggcagg gtggtttctg ttgtttcgga
    12421 taaattttgc agccctgata aaaaatatgg ctgctttggt aaaaaaatgc cgtctgaaag
    12481 gttttcagac ggcatttgtt tttaagaagc atcagcggaa gcggacgatt tccctgtctt
    12541 cgatatggat gcgtaccgta tcgtttcccg atatttcacc ggcgtgcggc atatcgaggt
    12601 tcagccatag gatgccgtgt tccggatgga ggacggacag gctgaacgat tcgggcaaac
    12661 aggtacggga taatacgcgg cactccatgc cgtcttggtc gaaacgcacc gcatgttgcg
    12721 gaatatggcg gtcatcgttg gtattgggca gccccatcag tcgggcgacc tgcacgcagg
    12781 acggtgtttt gaccaatgtt tcgggtgtgc cgtattgtag aatcctccct ccatgcatca
    12841 cggcgatttc gtccgccgcc gtgcaggcct cttcgggcga atgcgtcacc aaaacggcag
    12901 ggatgccgcc gtttcggata cgttcggcag tcatgcggcg cagcgtgccg cgcaaatgcg
    12961 tgtccaaact ggaaaacgat tcgtccaaca gcagcaggga agggcggaca accaaagcgc
    13021 gcgccagtgc caaccgttgt ttctcgcctc cggaaagttt ttcaggcttg cggtgcacct
    13081 cgttttccag tccgacttcg gcaagtgccg ccatggcaag gcgttcggct tcggctttcg
    13141 gcattttttg cattttcaaa ccgaatgccg cattttccag cgcactcata tggggaaaca
    13201 gcgcgtaatc ttgaaacatc agcgaaatac ggcgtttttc gggcggcata cgggtaatgt
    13261 tttccccgtt cagctgaatt tcgccgccgt ccggccggac gatgcccgca atcatattca
    13321 gcagggtgga ttttccgcag cccgaccgcc ccagtacggc gagtattttg ccgcgcccga
    13381 cagtcaggca gatgttgtcg gcaaccgttt tgccgccgaa gcgtttgcag agtccgttca
    13441 gttcaagcat ggcgcatcct ataaacgtat gccgtccagc cactcggaca gcggatgggc
    13501 ggcatcaatc agaccgtaac ggcaaaacgc gtccagcgta accagttgcg cgtcgtgcat
    13561 catgtttccc gacaacatgg tggcaaccaa gctgccgatg tccatttttt caaaacacgc
    13621 aacctcgccg tcctgatttt caggcaggaa ggtttcgggt aggacggcat cgaatacata
    13681 caggatttca ttgtgcacac cccggctgac ggggcgcagg ctgtgcagcc gggataccgg
    13741 gcggatgagc ggaaacagcg tttgatccaa acccgcttct tcgctgcttt cgcgacacac
    13801 ggcttcagac ggcaattcac cgctggaaac accgccggcg gcaatattgt cgagtttgtc
    13861 gggatcgact gctttgtgcg gactgcgcct gcctatccaa aaatgccatc tgccatccga
    13921 ttcagtcaga ccgttgagat ggacggcgcg gctgagcagt ccgaacggac ggaaagcggc
    13981 gcgttcgagt gagaacaaga tattgccgcc gccgtcggtc aggtcgaaac actcgttgcg
    14041 ccatccgtga agcagccccg ccttgttcca tgtgcgggcg aggtgctgca agcggccgcc
    14101 catatctgac cagccgtccg cattcaggaa aatgccgtct gaagactccg agcagcctgc
    14161 ctcccagtct tttttgacgc gttccgccca ttccggcgac agattgccca aaggcagacg
    14221 gttcagatac agcgttttcc agcaactttc tgcaccgtaa cttgcttttg cccactcgaa
    14281 cagggcatca aggtcgtgtt tgctgacgga ttcggtaaaa cggacggtcg gcatagtcgg
    14341 ctttcttgaa gacaatgcgg aagattgtag ccaaactgcc tgaatttgca accgcaaaca
    14401 gacggcggtc tgccgttccg atattgcggc aggaaggaaa atccggcaaa aaatggaggc
    14461 g
//
LOCUS       DAXHRP010000037        14448 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.037, whole genome shotgun sequence.
ACCESSION   DAXHRP010000037 DAXHRP010000000
VERSION     DAXHRP010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14448
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.037"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(53..361)
                     /locus_tag="ACFM72_000819"
     CDS             complement(53..361)
                     /locus_tag="ACFM72_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257415.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLADLDKELC
                     "
     gene            complement(345..647)
                     /locus_tag="ACFM72_000820"
     CDS             complement(345..647)
                     /locus_tag="ACFM72_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HFC6257416.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(721..3084)
                     /gene="pheT"
                     /locus_tag="ACFM72_000821"
     CDS             complement(721..3084)
                     /gene="pheT"
                     /locus_tag="ACFM72_000821"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HFC6257417.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVVAEVKSVEKHPDADRLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSNGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERSVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLDLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVNEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGQFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLEGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3109..3693)
                     /locus_tag="ACFM72_000822"
     CDS             complement(3109..3693)
                     /locus_tag="ACFM72_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HFC6257418.1"
                     /translation="MAIVDPPYGILNKTKRGGDYKFNMNEYSQWDIKPDQTYFNELFR
                     VSKNQIIWGGNYFGELWLRSEYNKGFIIWDKNQPETLNNFSMAEMAWSSFDRPSKIFR
                     FSVRKNRNKTHPTQKPVELYQWLLKMYAKQGDKILDTHLGSGTLAIACCIAQFDLTAC
                     EINSDYYQQSIEKIKNNLPEARISFGHPGYCIIE"
     gene            complement(3756..5225)
                     /locus_tag="ACFM72_000823"
     CDS             complement(3756..5225)
                     /locus_tag="ACFM72_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC6257419.1"
                     /translation="MTTARWVIDKHLQNFHILCKFAGILKTNSFISVEDKAKLSEKLE
                     KLDLYHRRNTGKSLDATTHKIKELSFYMFGYRDVCGQVTQKFLFSPLGNLFLKHLDNN
                     EYIQKIFLTMLWAIPFPHPYIKTDESIQLYPMRLIFKLLSDERLDCKLFSYEYIYLIS
                     FVKSADQNSYEKLVQDILVLRTCAEVKIKHQLTAENSRSHAYVNAAHEWESYFSKTLT
                     DAGVLQKTDGKIICRLKHGKTETYRKVTSSEFSIPKQLQEFVKKLQSAYSFSEMPLNL
                     NDSDRLKIDVIKEIYSFYPKELLEEIGELKDEAAYELLHLPRLIEQYADNNNGTEAYL
                     FEDVLEMGFNMFYNVEAKKIGGPGNTDLECLYITQKRKFAVEAKSTKNKLSGINSGRL
                     EDHKNKIKAIYTIVVTPRYVPAVLSDIRNCPIVIIRANTFAEFLYNCLINRSSIPEID
                     YRYFDEIIIKNLGKDISSEISNLTMQQFASNTTMEAYST"
     gene            complement(5228..6286)
                     /locus_tag="ACFM72_000824"
     CDS             complement(5228..6286)
                     /locus_tag="ACFM72_000824"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC6257420.1"
                     /translation="MMIGASLFSSAGIAETYLHNAGIKIIAANELVPERANLYKALYP
                     ESKMIIGDILHEEVFQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHL
                     IFRVIEFILLKRPTFVLIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFD
                     SADYGVAQHRKRAIIRMNKHSTIWGMPEKVTKTISVRDAISFLPSIESGQKSNVKWHF
                     ARTHAPEHIIWLKNTPTGRSAFDNIEHYPKKKNGEKIKSYNTTYRRMEWDAPAPTITI
                     RNDAISSQLNVHPGRSMPDGTYSDARVLTPLELMLLTSLPIDWNIPDDTSELLIRQCI
                     GESIPPLLIKKIVERIGK"
     gene            complement(6469..7461)
                     /gene="pheS"
                     /locus_tag="ACFM72_000825"
     CDS             complement(6469..7461)
                     /gene="pheS"
                     /locus_tag="ACFM72_000825"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HFC6257421.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFAK"
     gene            complement(7807..8166)
                     /gene="rplT"
                     /locus_tag="ACFM72_000826"
     CDS             complement(7807..8166)
                     /gene="rplT"
                     /locus_tag="ACFM72_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HFC6257422.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(8179..8376)
                     /gene="rpmI"
                     /locus_tag="ACFM72_000827"
     CDS             complement(8179..8376)
                     /gene="rpmI"
                     /locus_tag="ACFM72_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HFC6257423.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(8523..9044)
                     /gene="infC"
                     /locus_tag="ACFM72_000828"
     CDS             complement(8523..9044)
                     /gene="infC"
                     /locus_tag="ACFM72_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HFC6257424.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(9062..10975)
                     /gene="thrS"
                     /locus_tag="ACFM72_000829"
     CDS             complement(9062..10975)
                     /gene="thrS"
                     /locus_tag="ACFM72_000829"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HFC6257425.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIICHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(11029..11105)
                     /locus_tag="ACFM72_000830"
     tRNA            complement(11029..11105)
                     /locus_tag="ACFM72_000830"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11069..11071),aa:Val,seq:gac)
     gene            11284..12399
                     /gene="tgt"
                     /locus_tag="ACFM72_000831"
     CDS             11284..12399
                     /gene="tgt"
                     /locus_tag="ACFM72_000831"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HFC6257426.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAKKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRTGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQARFHENRARGTD"
     gene            12409..13491
                     /gene="hemH"
                     /locus_tag="ACFM72_000832"
     CDS             12409..13491
                     /gene="hemH"
                     /locus_tag="ACFM72_000832"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HFC6257427.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFFPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAKRMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            13682..14104
                     /locus_tag="ACFM72_000833"
     CDS             13682..14104
                     /locus_tag="ACFM72_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC6257428.1"
                     /translation="MNTTRLPTALILGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKNKKKLNRQNAV"
     gene            complement(14147..14437)
                     /locus_tag="ACFM72_000834"
     CDS             complement(14147..14437)
                     /locus_tag="ACFM72_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257429.1"
                     /translation="MAKYFTETGISVREHFDFFGEFVVSPAARSGDLALTYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVEGGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
BASE COUNT         3808 a         3653 c         3097 g         3890 t
ORIGIN      
        1 attttttagc gtgtaaaaca aaaccggctg catacctgca accggcctca aatcagcaca
       61 attccttatc caaatccgcc aacaggtctt tcagaccgtc tccgatttcc tgaagcgtaa
      121 ccggacggtt gccgtccgaa cccgattccg caccttctgc atacggtgca aacgtgctct
      181 gcaatttcaa cagtttcacc acatccaaac gggtgtagcg ttcgccgccg taaccgacaa
      241 ccacaccgtg atcatgctgc cattgcgcaa aaccataggg gctgatttgc aacagtccgc
      301 acaactcgtc cagcgtgaaa tagcgttttg cgggaacctt caaatcaacg ttgtttgtca
      361 tagtagtgtt ccaccatgct tttgagtttc tggctggcat ggaaagttac cacgcggcgg
      421 gcggtaatcg gcacttcctc gccggtttta ggattacgac ccgggcgttg cggcttgtcg
      481 cgcaactgga aatttccgaa accggaaatt ttgatttctt cgccgcttgc caaagtgctg
      541 cggatttctt caaaaaagag ttcgacgatt tctttggcat cgtttttggt gacgttgctg
      601 actttgtcta ccaaaatatc ggccagttct gctttagtga gagtcatatg attactttct
      661 gttgtaacag ttgtggatta ttaccaattt ttatttaaaa ttcaagcgaa tatttgtttt
      721 ttaactgcga agccgcgccc ctgccgccgt tgccgcgcca atcagttttc cgataagcgg
      781 ctcgaccgcc tcatccgtca gcgtgttttc catatcctgc aaaatcactt tgaccgccac
      841 gctcttcatc ccttcgggca aacccgtgcc gcgatacacg tcaaacacgc tgatttcctg
      901 taccaacttg tttgccgcgc cttccaagac aagcagcaaa tcatcatggc tcatagcttc
      961 cggcatcaca aacgccaaat cgcggcgcac cggctggaat ttcgatacgg cccgatagcg
     1021 cgttttcccg cattccaaca cggccgccat atcgatttca aataccagcg gcgcttgcgg
     1081 caggtcgtat ttttgcagcc atttcggatg cagttcgccg acaaagccga tgactttgcc
     1141 gtctgaaacg atattggcgg cgcgtccggg atgcagggca ggatgtccgg ttttaacgaa
     1201 ctcgactgct ttgtttttca acagattttc cacatctgcc ttgatgtcgt aaaaatctgc
     1261 attgcgcgtt ttcccgcccc attgttcggg cattgccgcg ccgtaccaca agccgccgat
     1321 gcgttcgttt tggacaaact ggccgtctga acctttgccg aacacgcggg cgatttcaaa
     1381 cacgcgcacg cggttttgtt tgcggttcag gttgttttgc aaaatttcca ccaagccgcc
     1441 gatgagtgtg gaacgcatca cggcatattg cgccgccagt gggttttgca ggcggatggg
     1501 gtcggcgttg gcggcaaaat cttgttccca ctgctcgtta acaaaggcat agctgaccac
     1561 ttcgcggtag ccgcgcgccg ccatttcgtt gtaaacggca aaacgcgggc ggcgtgtttc
     1621 gggcagttcc agcattttca gacggcctga cgtgtaatcg tcggggatgt tttcatagcc
     1681 gtaaacgcgt ccgatttctt caatcaaatc agcctcaatt tcgatgtcaa aacggaagct
     1741 cggcgcggta acgcggaagc cttccgccgt tttctcgggc tgcaggtcca agtgttgcaa
     1801 aatggtttcc acctgttcgg caggaatgtc cacgcccaac acggttttca gacggtccaa
     1861 acgcaatcca acctgcttcg cttcaggcaa ttcgccttgc gcttccacca tctcgcctgc
     1921 cgcaccaccg caaatctgca acaccaattc ggtagcacgt tcaatggcat ccgcctgcaa
     1981 acggtaatcc acgctgcgct cgaagcggaa cgacgaatcc gaaccgaaac cgtattggcg
     2041 cgatttgccg gcgatgattt cgggcgcaaa ccaagccgct tccagcacga tattttgcgt
     2101 gccgtctgaa accgcgctcg ccgcgccgcc cattaagccc gccaaactca acgcgccttt
     2161 ttcgtctgcc acgaccagcg tattttcaga cagggaaacg gttttctcgt tcaggcattc
     2221 cagcgtttcc ccttcgcgcg cgcggcggat gtgcaggctg ccggaaagtt tgtcggcatc
     2281 gaaaacgtgc atcggctggc cgatttccag cattacataa ttgccgatgt ccaccagcac
     2341 ggaaatactg cggatgccgc tgcgctccaa acgttgtttc atccaatcgg gagtagccgc
     2401 tttcgcattg acattttcaa taacgcggct gataaaacgg ccgcaatcgg caggcgcgtt
     2461 aatctgcacg ggctgttttc gactgcccgt gatcggcgcg gtatggattt cgggctgcct
     2521 gaacgcgcac cccgtcaatg cggacacttc gcgcgcaatg cctttgatgc tcaagcagtc
     2581 ggcgcggtta ggcgtaattt tcaacgtaaa cagcgtatcg tccaaatcca agtattcacg
     2641 gatattggta ccgacgggcg cgtcttcagg caaaatgtgc aggccgttca caccgtcgtc
     2701 gggcagaccg agttcgtcgg tggaacacaa catcccgttc gacaccacac cgcgcatctt
     2761 ggtcggcttg attttgaaat tgcccggcaa aacggcgccc ggcaacgaac acggcacttt
     2821 gatgcccgct ttcacattcg gcgcaccgca cacgatctga accaactctc ccgtacccgc
     2881 atcaactcgg gtaacgttca aacggtctgc atccggatgt ttttcaacgg atttcacttc
     2941 ggcaacaacc acgcccgcaa aggcaggtgc ggcagtctcg gcttcttcca cttccaagcc
     3001 ggacatcgtt aacagatgtt ccagcttatc ggaggaaagt tcggtatcgg cttgggtttt
     3061 cagccatgag taggagaatt gcatggttaa tttctctata tttttaagtt attcaataat
     3121 acaataacct ggatgcccaa aactgattct agcttcaggt aaattatttt ttattttctc
     3181 aatcgattgt tggtaataat cggaattgat ttcacaagct gtcaaatcaa actgtgcaat
     3241 gcagcatgca atagcaagag ttccacttcc taaatgtgta tctaaaatct tatcaccctg
     3301 ctttgcatac atttttaaca accactgata taattcgact ggtttttgtg ttgggtgagt
     3361 tttattacga tttttccgca cactaaaccg gaaaatttta gatggcctat cgaatgacga
     3421 ccaagccatt tccgccatag aaaaattatt taatgtctct ggttgattct tatcccaaat
     3481 aataaatcct ttattatatt cacttctcaa ccataactcg ccaaaataat tcccacccca
     3541 aataatttga ttttttgaca cgcgaaataa ttcattaaag taagtttggt ctggcttaat
     3601 atcccattgt gagtattcat tcatattgaa tttataatca ccaccacgtt tagttttatt
     3661 caaaatccca taaggaggat ctacaattgc caaatcaaaa tacttgtcag gataccgaga
     3721 cattaggatc atgttatctt catttgaaat agttatcatg tactatacgc ttccattgtg
     3781 gtgttacttg caaactgttg catagtcaaa ttggaaattt ctgaactaat atcttttcca
     3841 agatttttaa taataatttc atcaaaatac cgataatcaa tctctggaat actggagcga
     3901 ttaatcaaac aattatataa aaattcagca aatgtattgg cacgaataat tacaattggg
     3961 caattacgaa tatcggataa tacggcaggg acataacgtg gtgtgacaac aattgtgtaa
     4021 atggccttaa ttttattttt atgatcttcc aatcttcctg aattaatacc tgataactta
     4081 tttttagttg attttgcctc cactgcaaat tttctctttt gcgtaatata taagcactct
     4141 aaatccgtat tacctggtcc accaattttt ttagcttcta cgttataaaa catattgaac
     4201 cccatttcta gaacatcttc aaatagatat gcctctgttc cattattatt atctgcatat
     4261 tgttcaatca acctaggtaa gtgcaataat tcatatgctg cttcatcctt aagctcacca
     4321 atttcctcca ataactcttt tggatagaag ctataaattt ccttaatgac atcaattttc
     4381 aaacgatcac tatcgttcag atttaatggc atttctgaaa acgaataagc actttgcaat
     4441 tttttcacaa attcctgaag ttgcttagga atcgaaaact cacttgatgt tactttacga
     4501 tatgtttcgg tcttaccatg ctttagacgg caaataattt taccatctgt tttttgcaaa
     4561 acacctgcat cagtcaatgt ttttgaaaaa taagattccc actcatgtgc tgcatttaca
     4621 taagcatgac tacgactatt ttccgcagtt aattgatgtt taatttttac ttcagcacat
     4681 gttcgtaaca ccaaaatgtc ttgtactaat ttttcatagc tattctgatc agcagatttc
     4741 acaaatgaaa ttaaatagat atattcataa gaaaatagtt tacaatccaa tctttcatca
     4801 gataacaact taaatattag tctcatggga tataattgaa tactttcatc agtcttaatg
     4861 tacggatgag gaaatggtat cgcccacaac atagtaagaa aaattttttg aatatattca
     4921 ttattatcca agtgtttcaa aaataaatta cccaatggac tgaacaggaa tttctgtgta
     4981 acttgcccac acacatcacg ataaccaaac atatagaatg ataattcttt tattttatga
     5041 gtagtagcat ccaatgattt acctgtattt cgtctatggt ataaatctag tttttccaat
     5101 ttttcagata acttagcttt atcctctaca gatataaaag aatttgtttt caaaatacct
     5161 gcaaatttac ataaaatatg aaaattctgt aaatgtttat ctattaccca gcgcgcagtt
     5221 gtcatatcta ttttcctatt ctctctacaa tttttttaat taacaatgga ggaatagatt
     5281 caccaataca ttgccgaatt aataattctg atgtatcgtc gggaatattc caatcaatag
     5341 gtaatgatgt taaaagcatt aactctaatg gtgttaaaac tcttgcatct gaatatgttc
     5401 catcaggcat agaccgtcca ggatgaacat ttaattgtga actgatagcg tcattacgaa
     5461 tagtaatagt tggggcagga gcatcccact ccatacggcg ataagttgta ttataacttt
     5521 taattttttc accatttttt ttctttggat aatgttctat attatcaaaa gcagatcgtc
     5581 ctgttggcgt attttttagc catataatgt gctccggagc atgtgtacgt gcaaaatgcc
     5641 atttcacatt agacttttgt ccagactcaa tactaggcaa aaaactaata gcatcacgaa
     5701 cagaaatggt ttttgtaact ttttccggca ttccccaaat agttgaatgt ttattcatac
     5761 gaataatagc tcgtttacga tgttgtgcaa caccataatc ggcagaatca aaaatatgag
     5821 tttgaatata atattcgcaa ccaaataaat cttgcaaaat tacttctact gtttgtaatg
     5881 tccccttata aggtaactta atttttaaaa aaaatggaac attttcaatc aaaacaaaag
     5941 ttgggcgttt taataaaata aattcgatta ctctgaatat taaatgatta cgtttatcat
     6001 tagccatctc ttgaatgtta cgatttttcc ctgcaacact catgccttga caaggaggag
     6061 aagcaattaa aaaatctaat cgattcggca cgctctgtat taaattttga aacacttcct
     6121 catgaagtat atcacctata atcattttac tttcgggata tagagcttta tataaattag
     6181 cacgttctgg caccaattca tttgcagcta taatcttaat acccgcatta tgcaagtagg
     6241 tttctgcaat ccctgcactc gaaaacaaag aagcccctat catcatagaa ccaaacccaa
     6301 attaactata taatctctac aaagcaataa attatgcctc tttaaacaaa attaggaatg
     6361 taatttcaca acaaaatatc aaatgtttta tatcttacat ttgaattttc ctaagcagcc
     6421 tgaaaaccaa gagtaggctg cttttccata ttcaggcagt ctgcacgatc atttcgcaaa
     6481 ctgcttcaaa aagttcaaat cattatcgaa gaacaggcgc aagtcgttca cgttgtaacg
     6541 cagcatagcg aagcggtcga gaccgatacc gaaagcgaaa ccggtgtatt tttcagaatc
     6601 gatattcaca tttttcaaca cgttgggatg caccatgccg cagccgccga cttccagcca
     6661 tttgccgttt tcgcccataa tgtcgatttc ggcagacggt tcggtgaacg ggaagaaaga
     6721 cgggcggaaa cgtacttgca aatcatcgcg ttcaaagaag cgacggataa aatccgtgaa
     6781 cactgctttc aaatcggcaa aagttacgcc ctcttctacc cacaaacctt ccgcctgatg
     6841 gaacataggc gagtgcgtgg catcgctgtc cacacggtaa acgcggccgg gggcgataat
     6901 gcggatgggc ggctcttttt tatcgagcat atagcggatt tgaatcgggg aagtgtgcgt
     6961 acgcaaaaca tcgccgtttt caacgtaaaa cgtatcctgc atcgcacggg caggatggtt
     7021 tgcagggatg ttcagggctt ggaaattgtg aaaatcgtct tcgatttcag gcccgtccgc
     7081 cacttcgaaa cccattccgt gaaagagttc gaccacacgt tgcaaggtca gggttacggg
     7141 atgcaggctg ccgccttcct gagcgcgtcc gggcagggta atgtcgaggg cttcggcggc
     7201 aagtcgggct tgcagcttgg cttcgttgag ggcatcgcgt ttggcattaa aagccgtctg
     7261 aaaccggttt ttgcattcat tgatatgcgc acctatggtt ttgcgctctt caggcgacat
     7321 ttgccccaaa gttttcagaa gtccggtcaa ctcgccggtt ttgccaagat aacgggcttt
     7381 gatttgttct agagcgttga agtcttgcgc agcttctact gcggcaatgc cttctgcaac
     7441 gatgcggttt acattttcca taatatcaag tctgtcaatt aatgatatgc cacctgaaac
     7501 aacgaggccg cctgtatagc ctgacatatc agactcttca gacgacctta ttttcttcac
     7561 ggtcaatcca ttggataaat tttctgtata gtggattaaa tttaaaccag tacggcgttg
     7621 cctcgccttg ccgtactatc tgtactgtct gcggcttcgt cgccttgtcc tgatttaaat
     7681 ttaatccact atattttaac gcaaatttat ttaaaaaaat agactttaaa gaaagaaaat
     7741 caatcacata gaatttctgc aaacaaagaa aaaaggaagc cgcagcttcc ttttcaattt
     7801 tttggattaa gcagccaaag cagctttggc tttttcaacc aattgtgcaa aagcggcttt
     7861 atcgaacacg gccaaatcag ccaatacttt gcggtcgatt tcgatagagg cgcgtttcag
     7921 accattcata aatttgctgt aagacaaccc gttttcacgc gcacctgcat tgatacggac
     7981 aatccacaat tgacggaatt ggcgtttgcg ttggcggcgg tcgcggtatg cgtattggcc
     8041 ggctttcatt accgcctgct tggcaacgcg gtaaacgttt ttacgacgac cgcggtagcc
     8101 tttggctaac gcgaagattt tttggtgacg ggcacgggcg gtaacaccgc gttttacgcg
     8161 tggcatattc taaactcctt aagcgtaggg taacatttta gcaacagaag ccaaatcgcg
     8221 atcatttacc atagaggtac cgcgcagttg gcgtttgttt ttggtggtct ttttagtcaa
     8281 gatgtggcgt ttgaacgcat gagcgcgttt cacaccgccg ttacccagta ctttaaagcg
     8341 ttttttcgcg ctagacttgg ttttcatttt aggcatggga aaactccatt cgttatcgga
     8401 taaggcatta gggggtttta aaacatcggt ttcaaacact tgaacccaca atgccacggt
     8461 tttttgccgc aattaaaaac ttactccgaa gcggcgatcg gagtaagcgg agaattatag
     8521 ctttattttt tcttcggcgc aatcatcatc accatttggc gaccttccat tttgggaaag
     8581 gactcgattt gcgccacttc agccaaatct tcttttacac gttccaaaag ttgcgcgccg
     8641 agttgctggt gagccatttc acggccgcga aaacgcaatg tcactttgac tttatcgccg
     8701 tcggcaagga agcggttaat gttgcgcatc ttgatttgat aatcgccctc atccgtaccc
     8761 ggacggaatt tgatttcctt gatttgcacc tgcttttggt ttttcttggc ttcgtcgcgc
     8821 ttcttggctt gttggtattt gtatttaccg taatccatca gtttgcacac aggcggttta
     8881 gcagttgggg aaatctctac caaatcgaca tcctgccctt cggccatagc caaagcttca
     8941 cgaactgaaa cgacaccaag ctgttcgcct gactcactga ttaaacgcac ttctttggcg
     9001 gtaatttcgc cgttgattcg tgcttcgcgt tcttgagcga tgatgaatac tcctataaaa
     9061 attaatgatt gacgagggca tcagtgattt cttgctgcaa ttgcgcaatg aaatcatcca
     9121 aatccaaaga acccaaatct tctgctttgc ggcgtaccgc cactttgttt tcctgcttct
     9181 ccttatcgcc gacaacgatt tgataaggga aacggtattg gctgttgtcg cggattttgt
     9241 aaccgatttt ttcgttacgc aaatccaact cggcgcggaa tcctgccgcc tgcaatttgg
     9301 cagccacttc acggcagtaa tccgcttgat tttcggtgat attcataatc accatttgaa
     9361 ccggcgccaa ccataacggg aatgagcctg catggttctc aatcagaatg ccgataaacc
     9421 gctccaaaga acccaaaatg gcgcgatgca acataacagg acgcgcacgg tcgttgtttt
     9481 cagttacata ttcggcattc aaacgctccg gcaatacgaa atccagttgt aatgtaccgc
     9541 attgccaaga acgacccaag gcatctctga catgatattc gattttaggc ccgtaaaacg
     9601 caccctcgcc cggcaattcg ccccattcca cgccgcaggc agtcaatgcc tcgcgcaaac
     9661 cctgctctgc cttatcccac acgtcatctg aacctgcgcg tttttcaggg cgaagagaaa
     9721 gcttgacgga tacatcatgg aaaccgaact gtttgtagat gcgaaccaac aattcattga
     9781 acgcacgggc ctcgctgacg atttggtctt cggtacagaa aatatgcgca tcatcctgca
     9841 caaatccacg gacccgcatc agaccatgca atgcaccgct tggttcattg cggtggcaag
     9901 aaccgaactc ggccaaacgc atcggcaaat cgcgatatga gcgcaaaccg ttattaaaaa
     9961 tttgcacatg acccggacag ttcatcggtt tcaccgcgta ttcgcgtttt tctgaactgg
    10021 tcacgaacat attgtctttg tagttgtccc aatggccgga tttttcccaa aaggttttat
    10081 ccataatttg aggcgttttg acctctttat aaccggcggc gttcagctct ttacgcatat
    10141 gctgttcaat cacttgccac aaagcccagc ctttaggatg ccaaaacacc atgcccggcg
    10201 cttcgtcttg cagatggaac agatccaatt gcttgccaag tttgcggtgg tcgcgctttt
    10261 cggcttcttc gatacgttga atataggctt ttaattcgtc ttttgtcgcc caagccgtac
    10321 cgtatatgcg ttgcagcatt tcattattgc tgtcgccgcg ccagtatgcg cccgccaact
    10381 tggtcagttt gaagtttttc aggaaacggg tattcggaac gtgcgggccg cggcacatat
    10441 cgacatattc ctgatgatga tacatcccca tcgcttccac ttcgggcata tcgtcaatca
    10501 ggcgcagttt gtattcttcg ccgcgctctt gaaaaatttt aatcgcctcc gcacgcggag
    10561 tcatgatttt gaccacatca tagtcttggg caatcaattc tttcatacgc gcttcaatgg
    10621 cggcaacatc ttccggtgta aacggttttt ccgtggcaat gtcgtaataa aagccctctt
    10681 caatgacggg gccgataacc atttttgcat taggatagag ttgcttgacg gcatgcccga
    10741 caagatgggc gcaggaatgg cagatgattt cgatgccttc ctgatctttc ggagtaatga
    10801 tttgaacagc agaatcttca acaatcgggt cgcacgcatc gaccaatttg ccgtttaccc
    10861 tgcctgccac cgccgccctc gccaaaccga caccgataga cgcagcaatt tgagccacgg
    10921 taacggggga ttcgtattgg cggactgagc cgtccggcaa ggtaatgttc aacatcaaaa
    10981 agctccaaaa cattaaaaaa taacggcata aatgccgtta tgggaatttg gtaggcacga
    11041 ttggattcga accaacgacc cccaccatgt caaggtggtg ctctaaccaa ctgagctacg
    11101 tgccttcaaa gaatttttgc attttatcgg gtcgttttaa tttttgcaag aggtatgtgc
    11161 atttctttat gcaacattgt ggcaagattt ggggatgtcg tctgaaaaac cgtgggaatt
    11221 catttataat gccgtctttt aaaacatatt tcgccccctg tcgcccaact gacattcaat
    11281 cttatgctta aatttacctt acacaaaaaa gacggatacg cccgacgcgg cacgctggag
    11341 ttgaaccacg gcaaaattga aacgccggta tttatgcctg tcggtactta cggctcggtt
    11401 aaggcgatga acccgcaaaa cctgcacgac atcaaggcgc aaattatttt gggcaacact
    11461 tatcatttgt ggctgcgtcc gggcttggag gtcgtcgaac agtttggagg gcttcacggc
    11521 tttatcggct gggacaaacc gattctgacc gactcgggcg gttttcaggt tttttctttg
    11581 tcggatatgc gcaagctgac ggaagaaggc tgtacgttca aaagcccgat caacggcgac
    11641 aagctgtttt tatcgcctga aatttccatg aaaatccaaa cggttttgaa ctcggacatc
    11701 gcgatgcagc tggacgaatg cacgccgggc gaagcaacgc gcgaacaggc gaaaaaatcg
    11761 ctgcaaatga gcctgcgctg ggcggaacgg agcaaaaaag cctttgaaga tttgaaaaac
    11821 ccgaacgcgc tgttcggcat cgtgcaaggc gcgatgtatg aggatttgcg cgaagaatcg
    11881 ctgcgcggtt tggaacagtt tgattttccc ggccttgccg tcggcggttt gtccgtcggc
    11941 gaacccaagc ccgaaatgta ccgtatgctg cgcgccgtcg gtccgattct gccggaacac
    12001 aagccgcatt acctgatggg cgtaggcacg ccggaagacc tcgtgtacgg cgtggcacac
    12061 ggcatcgata tgttcgactg cgtgatgccc acccgcaatg cacgcaacgg ctggctgttt
    12121 acccgtttcg gcgatttgaa aatcaaaaac gccaaacaca agctcgacaa gcgtccgata
    12181 gacgaaagct gcacctgcta cgcctgccaa aacttcagcc gcgcctacct gcaccatctg
    12241 caccgcaccg gcgaaatctt gggcgcacag ttgaacacca tccacaatct gcatttctac
    12301 caagtcatta tggcggaaat gcgcgaagcc gtcgaacaag gcaaatttgc cgactggcag
    12361 gcgcgattcc acgaaaaccg cgcacgcggc acagactgat tccctgcaat gccgtctgaa
    12421 gccgcttcag acggcatttt gccgctttac cctacccgca ctatttttca gaaaccgatc
    12481 atgcttccat tctttccaga accctccctt tcctatacgc aacaaaaccg taccgccgtt
    12541 ttgctgttga acctcggcac gcccgacgcg ccgaccgcgc aggcggtacg accttatctg
    12601 aagtcctttc tgaccgaccg gcgcgtcgtc gaactgccca aatggctgtg gtatcccatt
    12661 ctgcatggtc tggtactgac gctccgcccc aaaaaaagcg cgcacgccta tgaaaaaatc
    12721 tggtttaagg aaggttcgcc cttagaagtt tacacagcac gccaagctgc cgcgcttgcc
    12781 aaacgtatgc ccgacctcat cgtccgccac gccatgacct acggcaatcc ttcggtggca
    12841 gacgtattgt cggaactgaa ggcgcaaggc gcgggcagac tgctggtcat cccgatgtac
    12901 ccgcaatatg ccgcttccag cagcggagcg gcagtagata aggtgtgcga acaattactg
    12961 ctgcaacgga accaaatgag cgtccgcacc gtttcgcgct tttatgacga taccggctac
    13021 attgatgcga tgaaaaacca catcctccga tattgggcgg aacacgggcg cgggaaaaaa
    13081 ctgatgttga gttttcacgg cgtaccgcag aagcactacg acctcggcga cccctatccc
    13141 gacgagtgcc gccacaccgc caaactgctt gccgaagcac tggaactgac cgaagaccaa
    13201 tatgtcgtat cgttccaaag ccaattcggc agggcaaaat gggttacacc gagcacgcag
    13261 gatttgttcg gcaaactgcc caaacagggg gtaaccgagc tggacgtatt ctgcccgggc
    13321 tttttggcag actgtttgga aaccatggaa gaaatcgccc tgatggggcg ggaacagttt
    13381 tatgaagcag gcggcaaaag ctaccgctac atcccctgcc tcaacgacaa tcccgactgg
    13441 atagacgcac tcgtcgcact tgccgaagaa aaccttggcg gctggcgttg aaactgtttg
    13501 acccatgtct aaaatgccgt ctgaacgccg tgttcagacg gcattttccc gctactttag
    13561 cgtatgatgg catctatgct ggacaacaca tcaagtgcaa ccttactacc gattcggcaa
    13621 gaaaatcttt cacccgctac gcaaaatcaa caacaaggtt tcaaacatta aggaaacacc
    13681 aatgaacaca acccgactgc cgaccgccct catcttgggc tgcctctgcg ccgccgcttc
    13741 tgccgccgac aacagcatca tgacaaaagg gcaaaaagtg tacgaatcca actgcgtcgc
    13801 ctgccacggc aaaaagggcg aaggccgcgg aaccatgttt ccgccgctct accgctccga
    13861 cttcatcatg aaaaaaccgc aggtgctgct gcacagcatg gtcaaaggca tcaacggtac
    13921 aatcaaagtc aacggcaaaa cctacaacgg attcatgccc gccactgcca tcagcgatgc
    13981 ggacattgcc gccgtcgcca cttatatcat gaacgccttt gacaacggcg gcggaagcgt
    14041 taccgaaaaa gacgtaaaac aggcaaaaaa caaaaaaaaa ctaaacagac aaaatgccgt
    14101 ctgaaaccgg caatccggct tcagacggca ttcaaatcaa acctttctaa cgcggtactt
    14161 tcagccccat agacccgata ttgccgtccc cgtcaacctc cttcgcggtc agcataaagc
    14221 cgccgatgtc aatacggccg ccctcgaccg gctcctgact atcggaacgc ttatcgaaaa
    14281 gctcggcaag gctcaaaccc tcttcgcccg cttccagcct caaaccgtaa gtaagtgcca
    14341 aatcacccga acgtgctgcc ggcgaaacga caaactcacc gaagaaatca aaatgctcac
    14401 ggacgctaat acccgtctcg gtaaagtatt tcgccatttt atagtgaa
//
LOCUS       DAXHRP010000038        14388 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.038, whole genome shotgun sequence.
ACCESSION   DAXHRP010000038 DAXHRP010000000
VERSION     DAXHRP010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14388
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.038"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(155..2128)
                     /locus_tag="ACFM72_000835"
     CDS             complement(155..2128)
                     /locus_tag="ACFM72_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
                     /protein_id="HFC6257430.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVITGDQTVNGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDNTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAGGSSNLPVENTACHIQVIAGTRHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDAA
                     ALGYEDRNERQRSALVSTWTDENLNDNGFLTPRSDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQGLQDKADRDHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSERVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
     gene            complement(2139..2699)
                     /locus_tag="ACFM72_000836"
     CDS             complement(2139..2699)
                     /locus_tag="ACFM72_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HFC6257431.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQHRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            complement(2696..3750)
                     /locus_tag="ACFM72_000837"
                     /pseudo
     CDS             complement(2696..3750)
                     /locus_tag="ACFM72_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            complement(3764..4111)
                     /locus_tag="ACFM72_000838"
     CDS             complement(3764..4111)
                     /locus_tag="ACFM72_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HFC6257432.1"
                     /translation="MDKELNPGTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(4212..4880)
                     /locus_tag="ACFM72_000839"
     CDS             complement(4212..4880)
                     /locus_tag="ACFM72_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HFC6257433.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(4877..6022)
                     /locus_tag="ACFM72_000840"
     CDS             complement(4877..6022)
                     /locus_tag="ACFM72_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HFC6257434.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGGRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRRNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GLTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAVRKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(6012..7343)
                     /locus_tag="ACFM72_000841"
     CDS             complement(6012..7343)
                     /locus_tag="ACFM72_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization N-terminal domain-containing
                     protein"
                     /protein_id="HFC6257435.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGTTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAAAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAVINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDIARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(7343..9481)
                     /locus_tag="ACFM72_000842"
     CDS             complement(7343..9481)
                     /locus_tag="ACFM72_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HFC6257436.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPDTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALGWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAALAQDTAAVTTGLAQVQSAMASASQTIN
                     TNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            9636..10238
                     /locus_tag="ACFM72_000843"
     CDS             9636..10238
                     /locus_tag="ACFM72_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257437.1"
                     /translation="MNMKKLISAICVSIVLSACNQQSKTAQAEEPVQSIQAADCTAPM
                     DITVEQYLINLEQAFKTQNVSTKIHNKNIVKTDCGYDLTLVMDFGAIALKLDEQQKIR
                     AISVGYILKTDGEKGQNLVNNAINGLHSIQAVLSLTTTDKLGESEAGKQLFTALTEVV
                     KESNQTGATAQKDVPADGILYSVVFEKETNTIAIIGRKQP"
     gene            complement(10282..10515)
                     /locus_tag="ACFM72_000844"
     CDS             complement(10282..10515)
                     /locus_tag="ACFM72_000844"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257438.1"
                     /translation="MRRRRRSSKTQLPDGTQKLPSGGHPDGKAGIGADAVRDMCHAEL
                     SAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(10490..10855)
                     /locus_tag="ACFM72_000845"
     CDS             complement(10490..10855)
                     /locus_tag="ACFM72_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257439.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     RLKPSAATASPDAPSAAEQ"
     gene            complement(10859..11236)
                     /locus_tag="ACFM72_000846"
     CDS             complement(10859..11236)
                     /locus_tag="ACFM72_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC6257440.1"
                     /translation="MSDATYADAVIMEMNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEDRRTSYLDCFTVDTG
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(11301..12710)
                     /locus_tag="ACFM72_000847"
     CDS             complement(11301..12710)
                     /locus_tag="ACFM72_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HFC6257441.1"
                     /translation="MPHINFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVADRLKTAITAADVTVTAS
                     GSGAAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANAFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVSNAIEQRGCIGVLGMSAALSTATTATGEINDGRM
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPLFAECNNA
                     LYNGLTPLTVVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(12713..12910)
                     /locus_tag="ACFM72_000848"
     CDS             complement(12713..12910)
                     /locus_tag="ACFM72_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HFC6257442.1"
                     /translation="MSKIKVTATDGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAALNTKTRNTKGE"
     gene            complement(12907..13557)
                     /locus_tag="ACFM72_000849"
     CDS             complement(12907..13557)
                     /locus_tag="ACFM72_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protein Gp37"
                     /protein_id="HFC6257443.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPARTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPEHTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(13547..13969)
                     /locus_tag="ACFM72_000850"
     CDS             complement(13547..13969)
                     /locus_tag="ACFM72_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protein Gp36 family protein"
                     /protein_id="HFC6257444.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFKRPFTDVPPILKRLCCDIARYRLTAANGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFLNGKNKVFGRDH"
     gene            complement(13969..>14388)
                     /locus_tag="ACFM72_000851"
     CDS             complement(13969..>14388)
                     /locus_tag="ACFM72_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257445.1"
                     /translation="RLKQGVIMAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARN
                     DVEMLTTALEKAEDDKKALSAELAELKVQHTQRAADALADSRDVMLVSTGADGKEFWR
                     GGLLFDGGWREVKRAEVGEAVWKAICAEPMLQRKAVE"
BASE COUNT         2797 a         4178 c         3897 g         3516 t
ORIGIN      
        1 cccatctcta cagcccatct ctacagccat ctctacagcc atctctacag ccatctctac
       61 agccatctct acaacccatc tctacaaccc atctctacaa cccgtctcta cagccatctc
      121 tacagcccgt ctctacagcc atctctacag cccgctagtc ttgcagtgcc tcgagcaagc
      181 cgtctcggcg gcggcggttt cggggtccgg ttgatgttct tccactctct ctttgcggtt
      241 cttcgttggt ttcaggtatt tcggggccta tcggggagct ggcggcgttt cccgaggcgg
      301 ctttgccgat ggccatccag tcgcaactgc cttcgtacca gttggtgata atggcggcgg
      361 cgtggttttt tgcgcggata aacagccagt tgtgttgcct tcgatcgccg gtaacgcgtt
      421 ccgaatggcg ttcggatacg aagcatttga cgttgccgtc ggcaaaggcg acggggaaga
      481 cgacttcgtt ttcgatgggg ccgccgcttc gtgtgaacct gtagctgccg gtctgtatca
      541 ttgtgccgtc ggggaatctg acaatatcca cgccgccgat ggtttggcgt gtgaattgcg
      601 cggcaacggc ggtgctgatt ttttcgtcca gcccttggat ttgggcggcg gtgtgggtgt
      661 ggtctcggtc ggctttgtct tgcaaacctt gcgccagcgt gcccgcgtcc agcgcgcctg
      721 cgttgatggt ttcgccgtgg gactttatcc aaaacacggc ttcgcccaag gtgtcggcgg
      781 ctttgatgca cagttttaaa accagggctt tggggcggtt ttcgtcgccg cctgtcgcca
      841 ttttgctgtc cgagcgcggg gttaaaaagc cgttgtcgtt taaattttcg tccgtccaag
      901 tcgatacgag cgcgcttctc tgcctttcgt tgcggtcttc gtaaccgagg gctgccgcgt
      961 ctgtgtggtt tgtccagtgt gaaaatactt tgtggacgtg ccgtttgatt tcgtcttcct
     1021 gcttcgttcc gactgccaag ctgttgcccg cgttgcggat aaagcggtct tccgcctgcg
     1081 ggacgttttg gatgctgccg tattttccgg tcagcagacg gtacagctcg ggataagcgg
     1141 tttcggttac gcgcgtgcgg atgtcgtcaa acgccagcca gccggtcggg atttggtcgg
     1201 acggaaacca cgcggtgatg ccgatgtcgg tacggcttaa atcgggcagg cggttgctgt
     1261 tgcccaaggc gcggtaaagg tcggggaagg tgttttgtgc aaaggtcgtg ccgttggctt
     1321 tgagatagcc tgcggggttt tgtacggctt tgggaaagga tacgatcgcg ccgacgggga
     1381 tgccgtccga attgagtttt ttccatgcgg accagttgtc gtttgcgctg ctcgtttggt
     1441 ggcgttcgta cacgtcggac gtgtaggcgg gataacccaa ctgcctgcac cagccgtgtc
     1501 gcgtgccggc gatgacttgg atatggcagg cagtgttttc aacgggcagg ttggagctgc
     1561 cgcccgctgt cggcagggaa tagatgccgt ctgttttgag ggtgttcaaa tcgccccgga
     1621 aggtttcgac tttgaaattg ccgatgccgt atccggacag tgtgttcggc ttgccttcga
     1681 tgtcttcggc aaaacgcggt ttgttggctt tgtggaagat gtcgtggttg ttgtaggaaa
     1741 tgcggttgtt tgcgccgtgc aggcggaggg tgttgtcgcc gaagacgatg tgggcgttgt
     1801 cggcatccgc gccgatgtag gctttgtggc cgccgttcca gttcgtctgg ttggcggata
     1861 aatggatgcc gctttggaat tgggtttggg cggtaaaggt tttttggccg ttgacggttt
     1921 ggtcgccggt gataactaca gccagcctat ttagtgctgc cagtaattga ttaggctgcg
     1981 acttatccgg ctggataccg gccgcagtca gcacggccag cagctcggat tgcacttggt
     2041 tgagccacca cgcgggcagg atggtgccca attcggacac gccgtcgccg tcgtggaagg
     2101 tcttatcggg ggtttcgatg gggtgcataa atcgtccttt agcggtaggt aaatcggata
     2161 gcggtgtggg cgggcttgag gcggttgaac aggctctcga tcacggcatc gctgtaatcg
     2221 gtcagcctgt cgcccgccgc cgagataccg gcgcggaatc gggtaatgcg gttgttgccg
     2281 ccgcgcacgt taacgtgcca cacccacatg atttcctgcg gcgcaagacg gtcgccggcg
     2341 cggtttacac cggcgcggaa cggctgcggt tcgtcgattt ggatttgata gcccgccgcc
     2401 tcggccaaac gcacaaaata aggaatactc aagccgcctg tttcgtttag cttggccatg
     2461 acggccaaca cacggtgctg gcggtttttg cccgtaccgt ccaaacctaa tacgcgctcc
     2521 caatcggcca gcatttggcc ggcgctgcgc gggtcgacgg catcggcaac gctttgagcc
     2581 gattccgcca ccgcatccag cgctgcgccg tctatttctg cctgcgcccg cacacgcggg
     2641 gcattgcggg catacgacac ggggggcaac aggccccgca agatgtcttg atagctcatg
     2701 acggcatctc cgttacatta atcgcgcccg ctttaaacca ctcgatgcgg ttaaccgtat
     2761 cggcggcacg gttggccgtc ggcgcagtca gacggcggtc gatcacacca tccacattgc
     2821 tgatagcagc ctcgatttgc gacacagtca ggccgtcgcc ggggatcagg gtgtcgaaat
     2881 attcttttag ggccgtccgt atgcggcgct tggcctcgtc caagtcgata ccgtcgagct
     2941 tgacttgcac ggtaacaggc accgccgtta cggttggctt gagtaccagc gcattttttg
     3001 ccgttaccgg gcgcatctcg tcgatataag cctgtacgcg gcgcacagtt tcttccgacg
     3061 acacaccgtc ggcggaggta atggcaatat ccaccgtacc caagccgcgg cgcagcggat
     3121 aaacatatgc gctggttacg ccgtcaacac tcaacgccca gtttttatag tcgtaacggt
     3181 tgccgcctgc gggcggtcgg cggatgattt ccaacagacg cgccagcagt gaggcatcgc
     3241 tttctcggtc ggtgccgcct tgtacggtaa ggcggcattc ggtggccaca ccggcggggg
     3301 cggccatcag ttgcgcctcg ccgtcgccac attggcggcc gcgcccggct cgtcggcgat
     3361 tgccggtatt tccgccgtgc cgccgctgcc gataacggcg cgggcggtag tgcggtaaaa
     3421 acgctggccg atacgcactt gcaggtcgtc tgaaagcatg gattgcgcaa taccgcttac
     3481 ggtcagcgtg ccgctggccg tggtaggatt gcggcggctc aagccgcgca tggaggcatg
     3541 ccgctccaaa tactcgcggt cggcggtatc agggaaaatc tgccgcacaa tccagctttg
     3601 atgcgcatat tgcccttcgg cgcagctggc caaacggctg gcgtgcacat aatggtcgct
     3661 gtcggggctg atatcggcat ccggccacag gcttttggta tcgcgcagga tacgctcgcg
     3721 gatttgctca aatgtcggcg tttcaaacac gtttaaaacc tctttaaatc acgggcactt
     3781 cgtggcggta atcaaacccg cccgccgccg tatccacccg gatatgcagg atcaggcggc
     3841 cgtcgtgcgg ctgctctgcg cgcacggtaa tcttgtcggc acgcccgctc ttaacaatcg
     3901 gttgcagtgc ctcatcggca tattgctcgg ccaacaggct gacccgttgc aggtcttttt
     3961 cgcgctgcaa caaatgcagc agcgagccga gcgttttatc cgcccaccag ctgcccaacg
     4021 gtgtcatcaa acggatatac acggcatttt gcagcgtatc gacggtgcgg ccggtatagt
     4081 cgccggtgcc ggggtttagc tctttgtcca tgttggcatt ttgccgtttt cagacggcct
     4141 cacggagtac acgggcttca atcccgcacg cacaaaaaaa gcagcccgaa ggctgccaaa
     4201 ggtctgcttg tctatgccgg ttccgctggt aaggttttgc cgccgatgct gtcggtatgc
     4261 gggtgctggc gcaacgatat attgccggcc accacgtcgc cgtcggtgtt aaagctgccg
     4321 cccgtttggt taacatcgcc gctaaaggtg gctccgtcgc cgccctcgac ggccatgccg
     4381 ccgttgccgt tgatttggcc ttgcgccgtc aacactgcac tggtctccac caacggagcg
     4441 ttaaatttgg catccgtggc cgcattaacc tcgtattgtt tgcagttaac ccggtacacg
     4501 tcgcaatcgg cctcaatgat tttgccttgc ttaatcacga tttttgcacc ctcatgatta
     4561 aaaatcgccg tctcgccggg cttaaggttt ttgatgcggt agctgccgtg ctggctgcac
     4621 acaatcacac cgtgcgaagt attgccgccc agcggtatca ctaccgcttc gctgccgtcg
     4681 ggcggatggc tggcaaagcc gtattcctgc aaatgttcaa ggtcttgcag ggtttcgtcg
     4741 gccaagccgc tcaactgcac gcgctgtatc ggctcggacg acaccaccag cgtgattttt
     4801 ccccgaaagg ccgcgcgcag ggtttcgccg atatttttag cagtttgtgc cgtttttttc
     4861 gccaatttac tcaaactcat tcaaacaccg ccgtttctgc ttgttttttg ccgccttttt
     4921 tgcccttatg gctcacgcct ttgcgtttgc ctttgcgctt gcgcaccgcc tcggcctttt
     4981 tggggtaagc gtcgggtgtc caaataccgt cctctttgag ccgcagctcg gtttgcgtgc
     5041 catccatgcg ggatagcata aaccgccgcc ccatcagaaa aaacaccgca tcgataccgt
     5101 gctcgtcgtc gatcacatgc acacgctggc caggttgcca caatacgccg tcgcgggttt
     5161 tatggccgcc cacggttatc gtgagtgtca atccctccag ccgccagtcg gccagctgct
     5221 ttttagcctg cttttgcaat gcggccaaat tgtcggcatc ggacaccacc accgttttag
     5281 ggcggtgcag cgtcatcgtc gggtctttgt acacccactt taaatcgtgt ttggcgctgt
     5341 cgccgctgcg gccgtgcgat tgcgccaaaa aagtaacctc ggaaaagcgg ttgtcggtat
     5401 cccactcaat gtccatgcgc tcgatattgc ggcggctgtc ggtgcggctc caacacaatg
     5461 tcgccaccgg cgggctgctg taatccgcac cgcccaccac caacgtgccg tccggctcca
     5521 gccacggatg cagcccgacc gagttggcaa tatgggttaa tgcctgccat acggtttcgc
     5581 ccggctcgat gtcgattttg tccaaagcgg ggttgttttc ggccttaagc accaccgctt
     5641 taatctgcgg ccacggcgcg gccagctttt tggctgcatc caataccgtc atgcccttta
     5701 cattgagctg cggcgcggag caatccacca aaaaaccggc caaatcacgc ccgctcaagc
     5761 tcaactcgcg gccgcccttg cttttgccgt ggcgctggct gccgatgatg cccgtcatca
     5821 cgatttgccc gtctatcact acctcgcagc tctctccgct taaatcgggt atggccgcct
     5881 ccggccccaa cctgccgatg acaaaatcga agctgtcggc agggattaaa aagtcgctgt
     5941 cgatgtcgta gcgctcccag tggcggtgct ctttaccgcc cacgcgcacc gacacggcat
     6001 agccgtatga attattttgc atagctgttg accaaagtgc cgcgcttgat aaacgcgggg
     6061 tggtggatat ggggattgag ccgcaccagc tctgctgcgc gggctatatc gccgtaaaac
     6121 tcgtgggcga tttggtgtat cgtaccgtcg attggggctt ggcgcacaat cagcggcggc
     6181 ttttggttga tgaccgccgc aaccaacgca ttcagacggc ctgccgccgc gcgcagggat
     6241 tctgccgttt ggtaagcctc ggtatacacg gcgttggccg tcagcccacc agactcggca
     6301 gcagccgtct gcaccgcccg taaggcggca atctcggcct gcatacggcg gcgcatggcg
     6361 cggttaacct caatcaaatc gggcgcggtc atctcttcgc catgcgcctc gattaatgcc
     6421 gttgccaccg acaacagcga tgacgtggat aacaggcgca ccgcctgcgc taccggctgc
     6481 acctgtttgg cggttaaacg gttcaggcgg ttttgcaggc cgtctgaaaa gcggccggtc
     6541 agcaaattat cagggatagc ggcggcacgg tcggcaacag ccgcagcccc gtcaaaccgc
     6601 tgtcgcggcg accaaccggc atggtgcatg gcattatcgg ccaaacccgc ctcacggcgt
     6661 atgccagtat ctaccatgac cgatatatcc gcaaacagct tggccgagcc gtttttaaac
     6721 gccgctgcgc tgtatccgcc ccgatcggga aaggcaattt tgtccaaatc aaacaaacgg
     6781 cgcaccgcgc caaacgtacc cgatgccgca ctccaaatgc ccagcgcgct gccccataaa
     6841 gccgatacgc ccgcatccac cgccaacacc gcatcaacaa agccgatagc cgcctcgcgg
     6901 taggtgtcga tatcagcaat caacgcctca agctcgacca aaaaggcgtt ttcaaaaaca
     6961 aagatttcct gcgcttcggc cgcctcgcgg aaagtaatat cgatgcccgc ataatccaca
     7021 taatcggcct catgtcggta gctccatgat gccgcaatca tgttgtgcat ccgcccccaa
     7081 acagggtgca ccagcacgcc gccgcccggc tgctccagcg catccagcag ctttttcaga
     7141 cggcctgcat agcccttgcc ccaaaacacc gcattaatct gcacctgccg cccggtcgtg
     7201 cccatgtctt caaggtcgat accctgcaca aacggccgcg catgctcggc caatgccttg
     7261 ccgttgctct cgtccaccac ctcaatatca aagccgacgc ccttgtaaga tgcgtcctgc
     7321 aataaggtat gccatccgct cattattgac ccgctccacg gccgaacatg gccacttgat
     7381 accgcgatac ctcattcgcg ataacacgtc cgtcgatatt caggctcaca ttggtattga
     7441 tggtctgact tgccgacgcc atcgcacttt gcacttgtgc caaacctgtt gtaactgcag
     7501 ccgtatcctg cgccaatgct gcctgatacg ccgccgtctg agttgaaaac aacggagaca
     7561 acatcttatc ggtaggctgc gctgacggag cagccaaata ctgagggaca ccaccccgcg
     7621 cctgttcccg cttcggcgca ggttcaaatc ggataccgtt gtttttcaga cgattaatca
     7681 tttcaggagt tgtcttggta ccacgcaaac cctttggcaa tgtgccgtca cccaaagact
     7741 cggaatacag caacatacct aacaaacccg cccgtttaac taacgctgga ttattcatga
     7801 gcccgctacc ggcagatttt ccccatgaca gcaacttacc gcctgccgct gtggcacctg
     7861 ctgccacgcc gcctgcggaa gccttacccc atcccaacgc tttactacct acatctttca
     7921 gaaagcctgc acctttaccg ccaccggcgg ttaataacat tgcggcagac gccgctgttg
     7981 ccgccgtcgt caatgcttgc agggctagag tggcattagg gtattccgct gccagctttt
     8041 taaacgaggt ttccatatcc accaatgttc ccgtcagact ttcccgcaac attgccagcg
     8101 attcctgttg ctcttgttgc gccgctgccg acaacattcg cgcctcgttg ttcttagcaa
     8161 tttttccgtt atccaacgtt acgccagcca acgaagccat atattcacgg atttgcgtca
     8221 tatccgttgc agccagcaaa ccttgttttg cctgcaaatc aggcagcagt tgcgccaaaa
     8281 gcgcgccctt aagcatattt gcctgctccg ccgccgtctt atcgcctgca gccgcgcgtt
     8341 tcttataatc ttggtattgc ttatccttta ctagcatggc atcggcaaga cgggacaaca
     8401 cctgcactgc gttttcgccg ttttgcttgc cttgcacaac cgagcctatc caatcgacac
     8461 ctttcttcgg gtcattcgga tttgccatct tcttcagacg acctatcgtg tcaggcgaca
     8521 gagttttact caaaagattt tgcacattag tcgccgcttc ggcaggactg cccgatttat
     8581 tcgccgcaga ttgtaagagt gagagcaggt agtccaaacc gccgacacca ttcatccctg
     8641 cctgttgcgc ggcagggagc aggctcggca gctcccgaac catatcccgc acctcgaaag
     8701 tgccgtctaa acccgattgc aagacgtgct caagcccgag ttgcaggtct ttaccgctca
     8761 tgccgccatc tttcagggtt ttaatcagtt ttgccgtatc ctcgccactg ccttctgagg
     8821 caagtgcaaa agcatatgcc gcctgcgctt cattcttggt ttgggcaaaa ttcagactgg
     8881 tggtcatcat gccgctgatt aaatccaaag ccttatcgtg ggtcccgcca tttttctcga
     8941 caagttcaag tgccaaatcc ttgatctgtt gcgcaccttc agttgcaatc cacgctgccg
     9001 atttactgtt atcctcaata aatgcctgtc tggacacgcg gttgatgttc tcatcaagct
     9061 gctttctgtt gtccatagca ggcttaagca ccgtatacgc tgccgcgcca ccagccaccg
     9121 cagctgcacc gaatcttccg atttttccca tcttgtccgc aaatcccgtg ccctgtttca
     9181 gttccgcgtt cagctcgcga attcggttac gcgtagcgac cgccgcccgt gccaaatcat
     9241 tttgtgatgc cttgccgctg cgcgccaaac ggttaaacgc agcctgtgtc agcatgattt
     9301 cgcgttgaat ctgtttttct gagcggatgc cggtcaacgc ataagtatgg ctttgccgtt
     9361 caagttgcgc ccgcgatttc gcggtacgat ctaattgtcg ttgagtatca gccagtagcc
     9421 gtctcgctcc gtcatctcgg gcggttaaca ccaacgacag tttcatgttc ccgtttgcca
     9481 taaaaagcag cctttaaacg tattaactca aggtcaatta tcgtttaaag gctgtttaag
     9541 ggaggcggta tgggcttcaa ccccgttttc gtgctttatt tgtttgttgc gttataatac
     9601 tagaatgata accattttat tcaaagggat attttatgaa tatgaaaaaa ttgatttccg
     9661 caatttgtgt ttcaattgtt ttatcagcct gcaaccaaca atcaaaaacg gcacaagccg
     9721 aagaacctgt ccaaagtatc caggctgctg attgtaccgc cccaatggac atcacagttg
     9781 aacaatatct catcaatttg gagcaagcat ttaaaactca gaacgtctca acaaaaatcc
     9841 ataataaaaa tattgtcaag accgattgtg gttatgacct tactttggta atggattttg
     9901 gggcgattgc gctcaaactg gacgagcagc aaaaaattag agctatctca gtaggctaca
     9961 ttttaaaaac cgacggagag aaaggacaaa atctagtcaa taatgccata aatggattac
    10021 acagtattca ggcagttctg tctttaacta ccacagacaa attgggcgaa tcggaagcag
    10081 gaaaacaact ttttacagct ttaaccgaag tcgtcaaaga atccaatcag acaggagcaa
    10141 cagcgcaaaa agacgttccg gcagatggta ttttatatag cgttgttttt gaaaaagaaa
    10201 caaacaccat tgcaataatc ggcagaaaac aaccctaacc gtcaaataaa aaaaaggtcg
    10261 tctgaaactc agacgacctt tttattttcc ctccggcttt ctcagccgtt tcgacacaat
    10321 cactccctct tccttcggcg tttttatgcc caggctcgac aggatgtctt caaaccatgc
    10381 cgacagctcg gcgtggcaca tatcgcgcac tgcgtccgcc cctatccccg ccttgccatc
    10441 aggatgaccg cctgacggta gcttttgtgt gccgtcaggt agctgcgttt tactgctccg
    10501 ccgccgacgg cgcatcgggg ctcgccgtag cggcggacgg ttttaggcgc aaatcctcct
    10561 gagccgccat cacggtatgg tagtcttcgg tagagaggtt ttccatcagc cactgcgccg
    10621 tcaggatgtc ggatgggata ccttgggctt caatctgctg cgaccagtag gtcagcgtct
    10681 ctaggacgtc gcgttgcagc agttcggctt ttgtggcgtt ttcgggcagc tcgggcaagt
    10741 catcaatcag ggcgaacgcc gccagttcgc cgccgacggt cagtggcttg aggcgtaatt
    10801 cagatacgac tttgccattg taggtcagcc cgtgggtcag tttgacggta atcacgcatt
    10861 actccttgat tttgtgcaaa gcaatcatct caatgtcgat gcgtgcctcg ttatcgactt
    10921 catattgctc gccggtatcg acggtaaagc agtcgaggta ggaagtgcgg cgatcttcgt
    10981 cgttgatggg gtaaatcgtg attttcgcct tggtgatgtt gtcccagtcg atttccgtac
    11041 cgtcgatcgg aatggcggcg gtaacgctta atttgtgttc ggttacgccg tcacaataac
    11101 cgttgactcg gccgttgcgg ttcatcgttt tgaccggctt gcggcctgta gtggtttgcg
    11161 gcttgatgct cacaatctcg atatcgcggc cgttcatctc cataatcacc gcgtcggcat
    11221 aggtagcgtc gctcatgctt tatccttttt taaggtttca gacggccttt aaacctgttt
    11281 taaacgccgt ctgaaaaggg ttacaaaatc aaatcaatgc gcccggcaaa gacgtgcagg
    11341 ccgttgacca catcggcggg gataatggca ttaacacggt tggggtcgtt ttgcgcacgc
    11401 gccaccacca gcttgccttt gttggcctcg gcgttttcga tgatttcggc ttggtcgagc
    11461 ttaatcagca cgtccaaaat ctcgctctta accttgggca gcaggcggtc gctcaatttg
    11521 tcgcgcggaa aacgcagggc aatgcgctct ttaacgctgc ggcgcacata atccagcgtg
    11581 cggatggtgg taatgtcgag tagtgccggg tcgtcggtgt tgttggccga cttggtatag
    11641 gtggatacgg cacgcataat ctgcacgcgg ttgttgacca ctgtgagcgg ggtcaagccg
    11701 ttgtacagcg cattgttgca ttctgcaaac agcggccatt gcgcatcagg tgtaacggcc
    11761 agccctttga tttccagcgt gttcagcggc ttggcagggt cttcttcaaa ggccaacacc
    11821 gccgcataac ctgcggcgat gatgccgttt ggctctaccg cacctttgta ccaagcacag
    11881 gtcatacggc cgtcgttgat ttcgccggta gcggtggtgg ccgtgctcaa ggccgcactc
    11941 atacccaata cgccgataca gccgcgctgc tcgatggcgt tggatacgtt ggtaatatgg
    12001 ttgctcaagg ctttggcgtt ggcgtcatcg ctaaacgggc tgcaaataat gtgataatgc
    12061 ttgcccgcca ctttggacaa ggccgtggca atgtccgcat ttttggcacc gccggtaaag
    12121 gcattggctt gataagttag gccggtattg ccggtgctca cggttaagcc gctctcgttg
    12181 ccgatctcgc ctttgtgttt ggccgtcagc gtaacggctg cgccgctgcc ggatgcggta
    12241 acggttacat cggcggcagt gatggcggtt ttcagacggt ctgccactgt ggcggcggtc
    12301 tcgccggtgt taacggccgt gcttacctgc ttgccgccaa tcgtgatttc caccacgccc
    12361 ggcgcggtgg ccgtgccgga aagggtaacg gttgcggttg cctgcacgcc tgcgctgtgg
    12421 tcggcaatac cgataacggt caaatccaaa taagggttgt tggcaaatgc ttggcgcacc
    12481 atcaaatgcg ccagcgagcc ttgtccgaac aaatcggccg cctcggcatc gctaaatagt
    12541 tgcaccggct ctaaggcggg ctgtatgccc gcggtcagca tgggtgcaac catcaatacc
    12601 ttttgcggat tttgcggcaa accttgcacg gcattgcggg tgttaaattc aatatactgc
    12661 ccgggcacgc ggatgctgcc cggaatcgtg tcaaaattaa tatggggcat cattactctc
    12721 ccttagtatt gcgggttttg gtatttaggg cggcatcctc aaccaccacc aaatcgccgt
    12781 catcaatcat gcggcggtaa tacaggctgt tgccgtccac ctccaccggc tcttggccga
    12841 tatattcgtg cgggttgtgt tcggtcggca cacgcaggcc gtctgtcgcc gttactttga
    12901 ttttgctcat tgcttatcct taagggttag gtttacaggt atttcatcgg cggattgcgg
    12961 gtcgtaaatt ttgccgtcca acccctcgaa atcaggccac ggctcgctca atgtaccctg
    13021 atacttggta aagatatggt tggggtcgtc gggattgtcg gtgtgttcgg ggtagcggtc
    13081 attttccaac ccgcaggtgt taaagcggat ggcatactca accgcatata tgcttactgc
    13141 ggcgttttgc accagcacat gattggcaat cgcgcgcacc gctttgggca ccaagccgcg
    13201 gctatcggca aaaccgagcc gctggccgtc aagcaggcgg cgaacagcgc ggattaaatc
    13261 gttgctgccg atttcgcggc tgtcgatgcc gccttgccgc tgcgcctgct cgttgcgcag
    13321 attgcgggcc gccaccatca ccacaaattc ggcggtatcc tgataacgtc cgcatacgcc
    13381 gccggttctg gcaggctcaa ctttgctgcc gccatacgtt acccaaaccg caggcagcgt
    13441 atggatttgc cccgccaaat cgtcggcctc gccgttgtag cttttaaccg tgcgcaccat
    13501 gcgacccaag ccccgtttca gacggtctgt tatcgcttgc tcaatatcag tgatcacgcc
    13561 cgaacacctt atttttaccg tttagaaaca caataccgtc ttcgcccgcg gccacttctt
    13621 cgccgctatc atccacgccc agctgcactt cgcctttggc catagcacgc agcaggtcga
    13681 gcacgtcgat tttgtagcgg ttgcggattt cgtcggtaat cagcacgccg ttggcggcgg
    13741 taaggcggta gcgggcaata tcgcaacaca agcgcttgag gatgggcggc acatcggtaa
    13801 acggacgttt aaaccgcccc agatacgcgt cgatttcggc agtggcgtcc accagcgcgg
    13861 tttgtgcgac ctcgcggtca atcagcccct cgttgttgcg gtcggtgagc tgcaagactt
    13921 ccagctcacc gaaacgcgca accatatcct caaccgtcgc gtatgccatt actcgaccgc
    13981 cttgcgttgc agcataggct cggcgcagat tgccttccac accgcttcgc cgacttcggc
    14041 gcgcttcact tcgcgccagc cgccgtcaaa cagcaggccg ccgcgccaaa attctttgcc
    14101 gtctgcgccg gtactgacga gcatcacatc gcggctgtcc gccaaagcgt cggcggcacg
    14161 ttgcgtatgc tgcactttga gttcggcaag ttcggcggac agtgcctttt tgtcgtcttc
    14221 ggctttttcc aaggctgtgg tcagcatttc gacatcgttt cgggcggcgg caagctctgc
    14281 ctgcacggcg tccaattcgg ctttgatgtc ttcaaacgac ggggcggcgg tttcggcggt
    14341 ttctggtttg ttgttggttt ttgccatgat gactccttgt ttcagacg
//
LOCUS       DAXHRP010000039        13838 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.039, whole genome shotgun sequence.
ACCESSION   DAXHRP010000039 DAXHRP010000000
VERSION     DAXHRP010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13838
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.039"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(116..1441)
                     /locus_tag="ACFM72_000852"
     CDS             complement(116..1441)
                     /locus_tag="ACFM72_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HFC6257446.1"
                     /translation="MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1652..2491
                     /gene="efeU"
                     /locus_tag="ACFM72_000853"
     CDS             1652..2491
                     /gene="efeU"
                     /locus_tag="ACFM72_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
                     /protein_id="HFC6257447.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2488..3654
                     /gene="efeO"
                     /locus_tag="ACFM72_000854"
     CDS             2488..3654
                     /gene="efeO"
                     /locus_tag="ACFM72_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HFC6257448.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTTNEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3918..5183
                     /gene="efeB"
                     /locus_tag="ACFM72_000855"
     CDS             3918..5183
                     /gene="efeB"
                     /locus_tag="ACFM72_000855"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HFC6257449.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5255..5584)
                     /locus_tag="ACFM72_000856"
     CDS             complement(5255..5584)
                     /locus_tag="ACFM72_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HFC6257450.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVL
                     DANGAVLQNGDTVILIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(5659..7029)
                     /gene="glmU"
                     /locus_tag="ACFM72_000857"
     CDS             complement(5659..7029)
                     /gene="glmU"
                     /locus_tag="ACFM72_000857"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HFC6257451.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDASAA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVRVRA
                     SHLAAGVNNKRQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNQIGPYARLRPQ
                     AKLANDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDGKLALARSRQTVIEGWVR
                     PEKDKQ"
     gene            complement(7084..7356)
                     /locus_tag="ACFM72_000858"
     CDS             complement(7084..7356)
                     /locus_tag="ACFM72_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HFC6257452.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7332..8066)
                     /locus_tag="ACFM72_000859"
     CDS             complement(7332..8066)
                     /locus_tag="ACFM72_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HFC6257453.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMADTENTLCR
                     LNGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTPPPRKYERMLCVKPSLS"
     gene            8125..9126
                     /locus_tag="ACFM72_000860"
     CDS             8125..9126
                     /locus_tag="ACFM72_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6257454.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9220..10068
                     /locus_tag="ACFM72_000861"
     CDS             9220..10068
                     /locus_tag="ACFM72_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFC6257455.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10094..10579
                     /locus_tag="ACFM72_000862"
     CDS             10094..10579
                     /locus_tag="ACFM72_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HFC6257456.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10681..12249)
                     /gene="msrAB"
                     /locus_tag="ACFM72_000863"
     CDS             complement(10681..12249)
                     /gene="msrAB"
                     /locus_tag="ACFM72_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HFC6257457.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12394..13659
                     /gene="ftsY"
                     /locus_tag="ACFM72_000864"
     CDS             12394..13659
                     /gene="ftsY"
                     /locus_tag="ACFM72_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HFC6257458.1"
                     /translation="MFSFFRRKKKQETPALEEAQIQETAAKAESETDQVIENIKEEVE
                     SLTESVKEQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAIAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         2957 a         3550 c         4153 g         3178 t
ORIGIN      
        1 atccactata attccgtcaa ataagaaagg aattttgtgc ctgcggtatc gcaaaacttc
       61 gccttaatgc gcccgattgc ctagggatgg gcttcagatg gcattgtttt ccggtttacg
      121 ggcggtattc gggcttcata ccgttgggta ggagctgcca gacatatccc gtggttttct
      181 gtttgccggc aagttcgccg gcttcgtcgc cgtatcccca aaaataatcc acgcgcaccg
      241 cgcctttaat cgcgctgccg gtatcctgcg ccataatcag gcggttgagg gctttgcggg
      301 taaccggatg ggcggtggcg acaaataagg gcgcacccaa ggtaatgtag tgccggtcga
      361 ctgcgccggc atattccccc atcagcggcg tgcccagtgc gccgacaggg ccgtcattgc
      421 tgcttccggc aagctcgcgg aaaaagatat agctggggtt ttgacccaaa acttcggcga
      481 ggcgttgcgg attttgccgc atataagact taatgccctg catggaggtt tgtccgagtt
      541 tgaggtagcc cttatccgcc atatagcgtc cgatggaaac gtagggatgt tcgtttttgt
      601 cggcatagcc gatgcggatg tatttgccgg acggggtttt cagacggccc gagccttgga
      661 tgtgcataaa aaaaagttcg acagggtctt cggcgtaacc gagtatcggg gctttgccgt
      721 caagcgcgcc gccgttgatt tggttgcgcg tgtggtaggg gaggaagcgg cttccttcaa
      781 acctgccttt gattgctgtt gtgcgcgcgg tgatggggaa tcgggagagg tcggcggtat
      841 gtgtgccgcc ggtattgtcg attgtgccgc tgttttttcc cgtctgcctg atgcggacaa
      901 gggcttttcc gctccgcaaa ccggcaggca gggggacgga gataaaatcg tcgggaatac
      961 cgtaaatcgg gaagcgggct tgtgccgtcc gcctgtcgtc gcccttcagc accggttcgt
     1021 aatagccggt aaccgtaccg gcaaggcttc cgttgcctgc aacctgccac ggcgtgaaat
     1081 agcgttcaaa aaactgtttt gcctgaaagg aatggacggg ggtttgaaag gcttgggcgc
     1141 acacatcctg ccagccttgg cggtttttca aattggcgca gccgaggcgg aaggattgca
     1201 ggcttttggc gaaatcctgc gccgcccagt ggggcaggga caggtgcggt acaacggtat
     1261 agacggcccc gccgccgccg accgtcgttc cggcggggtc ggggatgccg accggccggt
     1321 ccgggccgtt gatgacggat gtgtcgggtt gcggaaaggt ttggatgctc ttgctttggc
     1381 aggcggcgag gatggcggcg gcgatgccgt acagggcggc gcggaatagg tattttttca
     1441 taatggacaa tgttgccggc agtaataaga aagatggttt cgggcggcgt tgcggcagcc
     1501 gtggagaggg gattttaaca cagggcgcag ctgcagcctg cggaactttc cgccgcgcgg
     1561 tactgcagat aaaaataact tgcatttgta tttacaagca atgaaaatat tccgataata
     1621 tattattcat catccttgtt cgttcgcgtt tatgctggtc gcttttttaa ttatgttgcg
     1681 cgagggtatt gaagccgcgc tcattgtcgg catcgttgcc ggttttctga aacagtccgg
     1741 acattccaaa ctgatgccta aggtctggtt cggggtcgtc cttgcttctt tgatgtgttt
     1801 ggggctgggg tacggcatcc attcggcaac gggcgagatt ccccagaagc agcaggagtt
     1861 cgtcgtcggc attatcggtt tggttgccgt tgccatgctg acttatatga ttttatggat
     1921 gaaaaaggcg gcgcgttcga tgaagcggca gcttcaggat tctgtgcagg cggctttgaa
     1981 ccgtggcagc ggtcaaggat gggccttggt cggtatggcg tttcttgccg tggcgcgcga
     2041 aggtctggag agtgtttttt tcctgcttgc cgtattcaaa cagagcccga cgtggcagat
     2101 gccggccggc gcggtagcgg gggttttggc tgccgccgtg attggcgcgt tgatttatca
     2161 gggcgggatg cgcctgaatc tggcgaagtt ttttcgttgg acgggggcgt ttttgattgc
     2221 cgttgccgcc ggcctgcttg ccggctcgct gcgcgcgctg catgaggcag gtatttggaa
     2281 cgcgcttcag gatattgtgt tcgactcatc aaaatatttg cacgaagaca gcccgttggg
     2341 cgtgctgctc ggcggatttt tcggctatac cgaccatccg acgcagggcg aggccttggt
     2401 ttggctgctg taccttattc ccgtcataac ttggtttttg tgcggcagca ggccgtctga
     2461 aactttaacc cgtaaagagg agctgaaatg agaaaattca atttgaccgc attgtccgtg
     2521 atgcttgcct taggtttgac cgcgtgccag ccgccggagg cggagaaagc tgcgccggcc
     2581 gcgtccggtg agacccaatc cgccaacgag ggcggttcgg tcagtatcgc cgtcaacgac
     2641 aatgcctgcg aaccgatgga actgaccgtg ccgagcggac aggttgtgtt caatattaaa
     2701 aacaacagcg gccgcaagct cgaatgggaa atcctgaaag gcgtgatggt ggtggacgag
     2761 cgcgaaaaca tcgcccccgg actttccgat aaaatgaccg tcaccctgtt gccgggcgaa
     2821 tacgaaatga cttgcggtct tttgaccaat ccgcgcggca agctggtggt aaccgacagc
     2881 ggctttaaag acaccaccaa cgaagcggat ttggaaaaac tgtcccaacc gctcgccgac
     2941 tataaagcct acgttcaagg cgaggttaaa gagctggtgg cgaaaaccaa aacctttacc
     3001 gaagccgtca aagcaggcga cattgaaaag gcgaaatccc tgtttgccga cacccgcgtc
     3061 cattacgaac gcatcgaacc gattgccgag cttttcagcg aactcgaccc cgtcatcgat
     3121 gcgcgtgaag acgacttcaa agacggcgcg aaagatgccg gatttaccgg ctttcaccgt
     3181 atcgaatacg ccctttgggt ggaaaaagac gtgtccggcg tgaaggaaat tgcagcgaaa
     3241 ctgatgaccg atgtcgaagc cctgcaaaaa gaaatcgacg cattggcgtt tcctccgggc
     3301 aaggtggtcg gcggcgcgtc cgaactgatt gaagaagtgg cgggcagtaa aatcagcggc
     3361 gaagaagacc ggtacagcca caccgatttg agcgacttcc aagccaatgt ggacggatcg
     3421 aaaaaaatcg tcgatttgtt ccgtccgctg atcgaggcca aaaacaaagc cttgttggaa
     3481 aaaaccgata ccaacttcaa acaggtcaac gaaattctgg cgaaataccg gactaaagac
     3541 ggttttgaaa cctacgacaa gctgggcgaa gccgaccgca aagcgttaca ggcctctatt
     3601 aacgcgcttg ccgaagacct tgcccaactt cgcggcatac tcggcttgaa ataagccgca
     3661 agcgttcaga cggtatttgg cggcagatgc cgtctgaagt tttatagtgg attaacaaaa
     3721 accagtacgg cattgcctcg ccttgccttg ccgtactatt tatactgtct gcggcttcgt
     3781 cgccttgtcc tgatttttgt taatccacta tatccgccat atattgcagg gcaggatttc
     3841 aacctgccgc tatcggttaa tggaaaaacg gcgtgcaggg atacccatcc tgctgcacgg
     3901 atattgaagg aaacaccatg agcaaaaacc aacccgcaca accgaccagg cgcactcttt
     3961 ttaaaaccgc gatcgcagcc ggagcagtcg gcgcaatcgg aggttatctc ggcggcaaaa
     4021 aacagggcga aaccgccgaa cgcaccgccg aaagccaaca ctcgccccaa gcctatccct
     4081 gctacggcga acatcaggca ggcatcgtta cgccgcagca ggcgttttcg attatgtgcg
     4141 ccttcgacgt aaccgcgcaa agtgccaagc agctggaaaa cctgttccgc acgctgaccg
     4201 cccgcatcga gtttctcacc caaggcggcg aataccaaga cggcgacgac aaacttccgc
     4261 cagccggcag cggcattttg ggcaaagcct tcaaccccga cgggttgacc gttaccgtgg
     4321 gggtgggcag cagcctgttt gacggccggt tcggactcaa agacaaaaaa ccgattcatt
     4381 tgcaggaaat gcgcgacttc tccaacgata agctgcaaaa aagctggtgc gacggcgatt
     4441 tgagcctgca aatctgtgcc ttcacccccg aaacctgcca agccgccctg cgcgacatca
     4501 tcaaacacac cgtccaaacc gccgttatcc gttggagtat cgacgggtgg cagcccaaat
     4561 ccgaacccgg cgcgatggcg gcgcgcaacc tgttgggctt cagggacggc acgggcaacc
     4621 ccaaagtttc cgatcccaaa actgccgacg aggttttgtg gacgggtgtg gccgccaaca
     4681 gcctcgacga accggagtgg gcgaaaaacg gcagctatca ggcagtccgc cttatccgcc
     4741 actttgtcga gttttgggac aggacgccgc ttcaagagca aaccgacatt ttcgggcggc
     4801 gcaaatacag cggtgcgccg atggacggca aaaaagaagc cgaccaaccg gattttgcca
     4861 aagaccccga gggtgatatc acgcccaaag acagccatat acgcctggcg aatccgcgcg
     4921 atcccgaatt cctcaaaaaa caccgcctct tccgccgcgc ctacagctat tcgcgcggac
     4981 tcgcctcaag cggacagctt gatgtcgggc tggtgttcgt ctgctatcag gcaaaccttg
     5041 ccgacggatt catcttcgtg caaaacctcc tcaacggcga accgctggaa gaatacatca
     5101 gccccttcgg cggcggctat ttcttcgtct tgcccggcgt ggaaaaaggc ggctttttgg
     5161 ggcaagggct gctgggcgta taaatccgcc atataaaaaa cgccgtccga accttgccaa
     5221 acgggttcgg acggcgtttc ttgtttttgg gcggtcaggc ttttttgacg aattcggatt
     5281 ttaaattcat cgcgctgccg tcgattttgc agccgatgtt gtgatcgcct tcttgcaggc
     5341 gtatgccttt gacttttgtg ccttgtttga tcaccatcga gctgcctttt accttgaggt
     5401 ctttgatgag gatgacggta tcgccgtttt gcagcactgc gccgttggca tcgagcactt
     5461 gagccgcaag gtcggcggcg gattcggttt cattccattc gtgggcgcat tcggggcaga
     5521 tgtattgtcc gccgtcttca taagtgtatt cggaggcgca ttgcgggcat gggggtaatg
     5581 acatggtttg cagtccttat cggatgtttg ttttggggta ccgtctgaaa cctgaaaccg
     5641 gcttcagacg gcatggcttt attgtttgtc tttttccggt ctcacccagc cttcgatgac
     5701 ggtttggcgg gagcgggcga gggcgagttt gccgtcttcg acattgcggg taatcgtgct
     5761 gcccgcgccg gtggttactt tgttgccgat tttgacgggg gagaccaaga cgcagtttga
     5821 accgatgcgc acttcgtcgc cgatgacggt tttgtgtttg tgcacgccgt cgtagttggc
     5881 aataatcgta cctgcgccga agttggtttt gctgccgact tcggcatcgc cgatgtaggt
     5941 gaggtggttg gctttggtgc ctttgccgat ggcggcgttt ttgatttcga cgaagttgcc
     6001 gacgtgtacg tcgttagcta gtttggcttg cggacgcaaa cgggcgtatg ggccgatttg
     6061 gttgttttcg ccgacttcgc agtcttcgag gtgggagaag ggggcgattt tgctgtttgc
     6121 gccgattttg gcgtttttga tgacgcagtt tgcgccgatt tcgacgttgt cgccgatttc
     6181 gacttcgcct tcaaagatac agttcacatc aattacgaca tcctgtccgt gtttcagacg
     6241 gcctcgtaaa tcgaaacgtg ccggatcgcg cagggttacg cctgctttga gcaattcttg
     6301 tgcctgttcg gtttggaaga tgcgttcgag ttcggcgagc tggcgtttgt tgttcacgcc
     6361 ggcggcgagg tgggaggcgc gcactcggac gggatgaact ttaataccgt cggcaacggc
     6421 tttggcgatg aggtcggtta aataatattc gccttgggca ttgttgctgg aaaggctgtt
     6481 cagccagttt tccagtttgg cgttgggcag gacgagaatg cctgtgttgg tttctttcac
     6541 ggctttttgg gcggcacttg cgtctttttc ttcgacaatg gcggttacgc tgccgctgcc
     6601 gtcgcggatg atgcgcccca aacctgacgg gtcggcgggc acgtcggtca acagcccgac
     6661 ttcgttgcct gcggcttcga gcagggtttc gagggtttca acgtcaatta aaggaacgtc
     6721 gccgtacaac accagcgtgc ggccttcggc ggcaaggtgg ggcagggcgg ttttgacggc
     6781 gtggccggtg ccgagctgtt cggtttgttc aacccagacg acatcgcgtt tgacggtgtc
     6841 caaaacttgc tctttgccgt ggccgacgac gacgcagatg ttttgcggat tcagcgcggc
     6901 ggcggtgtcg ataacgcgcc cgagcattgt ttcgccgccg atttcgtgca aaaccttggg
     6961 cattttggaa tacatgcgcg tgcctttgcc ggcggcgagg atgacgatgt ttaaagtgtt
     7021 ttgcggcata gcgttttcct gtgcaatgcc gtctgaaagg gcttcagacg gcatagggtg
     7081 ggtttatcgg ttttgaaatt tgggcttttg ccagtgttgg cgatgctctt cgtcggcgtt
     7141 gttgccggtt tggttgggta acacggcatg gcgttcggga cggtattggt tgtagttcat
     7201 atttttcgag tagctgccgt cttggtaata aacgggcgtg ccggcgggat atttttgacg
     7261 gacggcggtc ttgccgttgc cgtcttgata agtttcccac gcgcagcccg acaaaagggc
     7321 ggcggcagtc atcaggataa ggaaggtttt acgcataaca ttctttcgta ttttcggggg
     7381 gggggtgtgc gggtattgta atgattttgg cggtgttctg acaaagtttc tgcataccga
     7441 gccagttgcg ccatatcgct tacggaagca tcgataaagg gcaggtcgtg cacttttgca
     7501 ccgaaccgga cggttttcat gcccaatgct tttgcctgat gcaggttgtc cgcgctgtcg
     7561 tccaccataa tgcagcattc gggcggtacg tccaaaaggc ggcagacatt gagatacgct
     7621 tgcggattgg gtttgtacag cagcccgaaa tcatccgtgc cgaacagtgc gtcgaaacgg
     7681 ttttccaaac cgagtgcgcc gacaacggca cggacgtaaa acgacgggcc gttggaaaaa
     7741 accgccttgc gcccgttcag acggcatagg gtgttttccg tatccgccat gccgtgcagc
     7801 ctggtcagga ttgcatcgat cggatggctt tcgcgcaaaa attcggcgat gtcgatttcg
     7861 ggatggtgga tttgcagtcc ggcgagcgtt gcgccgtagc ggtgccaata gtcttgacgc
     7921 aggtcggacg cggcagattc ggagagtttg aggcggcgtg ccatatagcg tgtcatggcg
     7981 cggttgatga gtgtgaagat gccggcatcg gcattgtgca gcgtgttgtc gaggtcgaac
     8041 agccacacgg tcgggttttc ttgcattttg aaccgtgaaa atttgttaga atgttatttt
     8101 acagcgaata gaggaggact cggaatgaaa cggaaaattt ggctgctgcc gctgctggcg
     8161 gtttcggcat acctgcaggc gcagacggaa gtcaggctgg cggtgcataa gtcgttcagc
     8221 ctgcccaaag ggctgattgc gcgcttcgag cgggcaaacg atgcgaaggt gtcgattatt
     8281 caggcgggcg gcgcgaacga aatgctcaac aaactgattt tgagccgcgc caacccgatt
     8341 gccgacgcgg tgtatggttt ggacaacgcc aatatcggca aggcgcggga aatgggcatt
     8401 ttggcggcgg cgcaacccga atccgccccc gtcgcggtcg ggctgccttc ggctttggcg
     8461 gtcgattacg gctatgtgtc catcaattac gacaaaaaat ggtttgaagg caaaaagctg
     8521 cccctgccgc aaaccctgca ggatttgacc cgccccgaat ataaaaacct attggtcgtg
     8581 ccgtcccccg ccacgtcgtc cccggggctg ggcttcctga tggcgaacat cagcggtctg
     8641 ggcgaagaag gcgcgttcaa atggtgggca cagatgcggc agaacggcgt gaaggtcgcc
     8701 aaaggctgga gcgaggcgta ttacaccgac ttttcgcaca acggcggcgc gtatccgctg
     8761 gtggtcggtt atgccgccag cccggcggcg gaagtgtatt tttccaaagg caaatacagc
     8821 gagccgccga cgggcaacct gtttttaaaa ggcggcgtat tccgccaggt cgaaggcgcg
     8881 gcggtcttga agggcgcgaa acagccgaag ctggcggcaa aactggtgca atggctgcaa
     8941 agtcgggaag tgcagcaggc ggttccgtcc gaaatgtggg tttaccccgc cgtcaaaaac
     9001 acgcgcctgc ccgacgtgtt ccgcttcgcc caagccccga cgcacaccac cgcccccgcg
     9061 cagcgcgata ttgatgcgaa ccagcgcgga tgggtttccc gttggattag aacggttttg
     9121 aaataaaaca aacataccgc cccgcagggc ttcatacggc atttttacac ctgtgccgat
     9181 tacgccgcat ggggcggatg ttcgatcaag aggaaaacaa tggacttcaa acaatttgat
     9241 tttttacacc tgatcagtgt ttccggttgg gagcatctgg ctgaaaaggc gtgggcgttc
     9301 gggctgaacc ttgccgccgc gctgcttatt tttttggtcg gaaaatgggc ggcgaaacgc
     9361 attgtcgccg tgatgagggc ggcgatgacg cgcgcgcagg tcgatgccac gctgattagt
     9421 tttttgtgta atgttgccaa tatcggctta ttgattttgg tgattattgc cgcattgggc
     9481 agattgggcg tttccacaac atccgtaacc gccttaatcg gcggcgcggg tttggcggtg
     9541 gcgttgtccc tgaaagacca gctgtccaat tttgccgccg gcgcgctgat tatcctgttc
     9601 cgcccgttca aagtcggcga ttttatccgc gtcggcggtt ttgaaggata tgtccgagag
     9661 attaaaatgg tgcagacttc tttgcggacg accgacaacg aagaagtcgt gctgcccaac
     9721 agcgtggtga tgggcaacag catcgtcaac cgttccacac tgccgctgtg ccgcgcccaa
     9781 gtgatagtcg gcgtcgatta caactgcgat ttgaaagtgg cgaaagaggc ggtgttgaaa
     9841 gccgccgtcg aacacccctt gagcgttcaa aacgaagagc ggcaggccgc cgcctacatc
     9901 accgccttgg gcgacaatgc catcgaaatc acattatggg cttgggcaaa cgaagcagac
     9961 cgctggacgc tgcaatgcga cttgaacgaa caagtggtcg aaaacctccg caaagtcaat
    10021 atcaacatcc cgttcccgca acgcgacata cacatcatca attcttaaac gccgtctgaa
    10081 agaggagtgg gaaatggacg cgctgcacac catcgcccga aacctgacga aaaaacgtca
    10141 aaccgtaagc tgtgccgaat cctgtacggg cggaatgctt gccgccgcat tcacaagcgt
    10201 tgcaggcagt tcgcaatggt tcgaccagag ttttgtaaca tacagcaaca aagccaaaga
    10261 agaccgcttg ggcgtgttgc ccgaaaccct gctcgaacac ggcgcggtca gccgccaaac
    10321 cgtctatgag atggcgcgcg gcgcgaaagc cgtggcgcag gcggattacg ccgtcggtat
    10381 ttccggcatc gccggtccgg gcggcggcag cgaaagcaaa cccgtcggca cggtttggtt
    10441 cgggtttgcc tttccgggcg gaagttgcga agcaatgcgc cgttttgacg gcaaccgcga
    10501 atccgtccgc gcgcaggcgg tcgccttcgc gttggaacgg ttggcggggc tgattgaaaa
    10561 cggcggcgat gccgtctaaa caaaatctcc gtctggacaa aatccccgcc ggataaaaaa
    10621 taccgtctga aacgttgcag gtttcagacg gtattttgtc gggttaggcg gcggtgcggc
    10681 ttatttcact ttactcttca acgcgccgta gcctgccgcg tccatttgtt ccagcgggat
    10741 gaatttcaag ctcgcgccgt tgatgcagta gcgcagtccg cctttgtcgc gcgggccgtc
    10801 ggggaagacg tgccccaagt gtgagtcggc ggcgtggctg cgcacttcgg tgcggcgcat
    10861 gttgtagctg aaatcatcgt gttcggtaac ggattttgca tcaatcgggc gcgtgaagct
    10921 cggccagccg cagccggaat catatttgtc ggcggagctg aacaaaggtt cgccgctgac
    10981 aacgtccaca taaatgccgg gtttgaacaa atggtcgtat tcgtggctga aggcatattc
    11041 ggtcgcgctg ttttgggtaa cttggtattg ctcttcggtc agggtgcgtt tgagttcggc
    11101 gtcactcggt tttttatacg ttgccgcatc gaagcctttg ccttgcgggg cggtcttggt
    11161 tttgcccggc agcggttcgt cggctttgcg gatatcgatg tggcagtagc cgttggggtt
    11221 tttaatcagg tagtcctgat ggtattcctc ggcatcgtag aagtttttca gcggctcgtt
    11281 ttcaacaacg aggggcagtt ggtatttttg ctgctcgcgt ttgagggcgg cggcgatgac
    11341 ggctttttcg gcggggtcgg tgtagtacac gccgctgcgg tattgcgtac cggtgtcgtt
    11401 gccctgtttg ttgaggctgg tcggatcaac gacgcggaag aaatattgca ggatgtcgtc
    11461 taggctgagt ttgtcggcat cgtaggtcac tttgacggtt tcggcgtggc ccgtatggcg
    11521 gtaggacacg tcttcatagc tcggattttt cgtgttgccg ttggcgtagc cggataccgc
    11581 gtcaaccacg ccgtcgatgc gttggaaata ggcttccaag ccccagaagc agccgccggc
    11641 gaggtaaatg gtgcgcgtgt tcatgatttt tgaatccttt ttctgagtgt cgggtttgta
    11701 gaacgaatgt ttcaagctgc ccaaatcggc attcgggtcg cggattaacg ccaacgcctg
    11761 cgcttcgttg atgctgcctt tgacgatgcg ctgcacgtcg ccgtctttac cgattaacgc
    11821 ccacgagggg taaacgctga tattcaggct ttgggcgatc gtgccgccgt tgtcggttac
    11881 gacgggcagc ttgggataat tcaaaccggc ataccatttt tggaagtcgc cgtctttttt
    11941 ctcgtgcaaa aagcccggag acgcgacggt aatcaggttg gcggagctga attttgcatc
    12001 ttgcgcccat ttttcggtct gtcccaattc ggacaaacac aaaggacacc agctcgccca
    12061 aaatttaatc agcgtcggtt tgtctttttt caagtaaaca ctggcggggc ggttgtccgc
    12121 agttttcaaa gtggataaag tgtgcggcac ggtcgcggct ccggcatcga cgattttggg
    12181 cgaacaagca cccagcgcaa gcaggcagcc gaacttggcg caaagggaaa agaaagtacg
    12241 gtgtttcatt ttgagtttcc tgtgtggacg gtttgcatga ttagacgttt gagatgccga
    12301 aaccttacag ctcggatttt cagacaacct tgccgcgtaa aatacgctac aatacgccct
    12361 gtttcaagtt tctaaaatta aaaggaaaat tcaatgttca gcttcttccg tcgcaagaaa
    12421 aaacaggaaa cgccggctct cgaggaggct caaattcagg aaaccgcagc aaaagcagag
    12481 tccgaaaccg atcaagtaat tgaaaatatt aaagaagaag tcgaatcttt aacggaaagc
    12541 gtcaaagagc aggtcgaatc ggctgttgaa accgtcagcg gtgcggttga acaagtaaag
    12601 gaaaccgttg ccgagatgct gtctgaagca gaggaagcgg cggaaaaagc agcggaacaa
    12661 gtcgaagcgg caaaagaagc cattgccgaa accgtcggcg aggctgtcgg gcaagttcaa
    12721 gaagccgttg caacaactga agaacacaag ctcggttggg cggcgcgttt gaaacaaggt
    12781 ttgaccaaat cgcgcgacaa aatggcgaaa tcgctggcgg gcgtgttcgg cggcggacaa
    12841 atcgacgagg atttgtacga agagctggaa accgtgctga ttaccagcga tatgggcatg
    12901 gaagccaccg aatacctgat gaaagacgtg cgcgaccgcg tcagcctcaa agggctgaaa
    12961 gacggcaacg aattgcgcgg cgcgttgaaa gaagccttgt acgacctgat taagcctctg
    13021 gaaaaaccat tggtcttgcc cgaaaccaaa gagccgtttg tcatcatgct tgccggcatc
    13081 aacggcgcgg gcaaaaccac gtctatcggc aaactcgcca aatatttcca agcgcagggc
    13141 aaatccgtat tgctggcggc aggcgacact ttccgcgccg ccgcccgtga gcagcttcag
    13201 gcatggggcg aacgcaacaa cgttaccgtg atttcgcaaa ccacgggcga ttccgccgcc
    13261 gtgtgcttcg atgccgtcca agccgccaaa gcgcgcggca tcgacatcgt gcttgccgac
    13321 accgccggcc gcctgcccac gcagcttcat ttgatggaag aaatcaaaaa agtgaaacgc
    13381 gtgctgcaaa aagccatgcc cgacgcgccg cacgaaatca tcgtcgtgct tgatgccaac
    13441 atcgggcaaa acgccgtcaa ccaagtcaaa gcctttgacg acgcattagg gctgaccggt
    13501 ttaatcgtga ccaaactcga cggcacggca aaaggcggca tcctcgccgc gcttgcctcc
    13561 gaccgccccg ttcccgtccg ctatatcggc gtgggcgaag gcatagacga cctgcgcccg
    13621 tttgacgcgc gcgcgtttgt ggacgcactg ctggattgag ccgaaatgcc gtccgaaaac
    13681 agcagaccga tgccgtcatt cccgcgcagg cgggaatcca gaccttggga taacggcaat
    13741 attcaaaggt tatctgaaag tccgagattc tggattccca ctttcgtggg aatgacggga
    13801 tgtaggttcg tgggaatgac gtggtgcagg tttccgta
//
LOCUS       DAXHRP010000040        13455 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.040, whole genome shotgun sequence.
ACCESSION   DAXHRP010000040 DAXHRP010000000
VERSION     DAXHRP010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.040"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(110..538)
                     /locus_tag="ACFM72_000865"
     CDS             complement(110..538)
                     /locus_tag="ACFM72_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HFC6257459.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(603..2351)
                     /locus_tag="ACFM72_000866"
     CDS             complement(603..2351)
                     /locus_tag="ACFM72_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HFC6257460.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTVMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFAAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2678..4111
                     /gene="ccoN"
                     /locus_tag="ACFM72_000867"
     CDS             2678..4111
                     /gene="ccoN"
                     /locus_tag="ACFM72_000867"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HFC6257461.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4138..4749
                     /gene="ccoO"
                     /locus_tag="ACFM72_000868"
     CDS             4138..4749
                     /gene="ccoO"
                     /locus_tag="ACFM72_000868"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HFC6257462.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4754..4924
                     /locus_tag="ACFM72_000869"
     CDS             4754..4924
                     /locus_tag="ACFM72_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HFC6257463.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4948..5859
                     /gene="ccoP"
                     /locus_tag="ACFM72_000870"
                     /pseudo
     CDS             4948..5859
                     /gene="ccoP"
                     /locus_tag="ACFM72_000870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
     gene            5935..6279
                     /locus_tag="ACFM72_000871"
                     /pseudo
     CDS             5935..6279
                     /locus_tag="ACFM72_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
     gene            6481..7890
                     /locus_tag="ACFM72_000872"
     CDS             6481..7890
                     /locus_tag="ACFM72_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HFC6257464.1"
                     /translation="MDTQIKTEAGQQNNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7992..11201
                     /gene="recC"
                     /locus_tag="ACFM72_000873"
     CDS             7992..11201
                     /gene="recC"
                     /locus_tag="ACFM72_000873"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HFC6257465.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVGTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTAMFGRFAAFLETLSDIVRIWRQPATVDEWVGRCRGLLKTLFQAEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNLIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQSVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTFAAAEKKEEAGAA"
     gene            complement(11271..12839)
                     /gene="mtrF"
                     /locus_tag="ACFM72_000874"
     CDS             complement(11271..12839)
                     /gene="mtrF"
                     /locus_tag="ACFM72_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HFC6257466.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13172..13384
                     /locus_tag="ACFM72_000875"
     CDS             13172..13384
                     /locus_tag="ACFM72_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257467.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENIHAMIGEIKNAI"
BASE COUNT         3380 a         3225 c         3568 g         3282 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgtggtt taaacgtttc ggcttgtaat cagacgcggg
      121 cgttgtccag ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga
      181 tgatttcgtc aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc
      241 gcgtaccggt ccggcaatag gcaaggacgg gatattcggc ttgtccgatg agttggcgga
      301 aggtttcgac atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag
      361 taacgcctgc ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt
      421 cgcggtcggg gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat
      481 cggctttggt cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt
      541 tgtttccttt actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa
      601 gtttaaccga acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta
      661 tccgctgccg ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag
      721 tggatattga tttttgcatt gacgtggtat cgggcccatt gtgcggcaaa gtcggtgcag
      781 gcataaccgt ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg
      841 ccgccgttga agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca
      901 aaatcgcctg ccgacgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg
      961 ggaagcggca ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa
     1021 tcttcggtac tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc
     1081 tgacagcgga tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga
     1141 tagagtttgt ccattaccgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc
     1201 agatcaaggc acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg
     1261 ctgttttcat caggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc
     1321 tgcctcaaac ggccgcgggt ttgttgtacg cgtgtaatgc cttgtgccag caggtttaaa
     1381 taagattcgg gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta
     1441 ataccttcga atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg
     1501 aacgcggcag gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt
     1561 ccgagcaatg tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg
     1621 cggtcggcga gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg
     1681 acgtggagca ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct
     1741 gtttcgcaga tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg
     1801 ccgcttaagg caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag
     1861 cccatctcga caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc
     1921 cctgtttccg gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag
     1981 cggtgcggca gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa
     2041 ccgcgttctg tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag
     2101 cggatttgcc actcgccgcg tacggcggcg gcatgccagc ggtttttggc aatttgttcg
     2161 agcggcatgg acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc
     2221 cgaatcagat agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca
     2281 tcttgtgtga atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta
     2341 taatgaatca taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg
     2401 cagcttaacc tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg
     2461 cggtcgggtt gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc
     2521 aaagggctcg tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa
     2581 atttagaaaa aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga
     2641 taaaaatctt tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta
     2701 caaagtggtg cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt
     2761 cggcgttatc gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc
     2821 ttggttccac ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg
     2881 cggttgcggc ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct
     2941 tttcggcggt tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc
     3001 cgtcgtcagc ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc
     3061 gatcgatatt ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat
     3121 tgccaaacgt aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt
     3181 ggcggtcgca cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc
     3241 ataccccgtc tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc
     3301 cgtgggcttc ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca
     3361 agcagcccgc cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt
     3421 cacctatatg tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca
     3481 atctttgggt atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa
     3541 cggcatcatg accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt
     3601 cctgattgta tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat
     3661 taaaacggtc aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg
     3721 tgcgttgggc tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct
     3781 gttcggcaaa gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac
     3841 catcggcgtg gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat
     3901 gtggagttct ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg
     3961 caccatgcct tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg
     4021 cattatggcg tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat
     4081 ccctgcggtt tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg
     4141 aaattacaac aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta
     4201 gtcagtgtcg gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag
     4261 ccggcgccgg gcgtgaagcc ttacaatgcc ctgcaggttg ccggacgcga tatttacatc
     4321 cgtgagggct gttacaactg ccactcgcaa atgattcgtc cgttccgtgc ggaaaccgag
     4381 cgttacggtc attactctgt tgccggagag tcggtttacg accatccgtt ccaatggggt
     4441 tccaaacgta ccggtcctga tttggcacgt gtgggcggtc gttattccga cgaatggcac
     4501 cgtatccacc tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattcccg
     4561 tggcttgcac gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt
     4621 aaagtaggta ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac
     4681 aaatccgagc tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac
     4741 gtaaggtaac atcatggata ttaacggtat tcgtgctctc ttcacggtat ggatctttat
     4801 ctgtttcctg ttggtactct atatcgtctt caacaggcgg aataagaaaa actatgataa
     4861 tgccgcaaac agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg
     4921 ttaatattgt gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc
     4981 tggaatatat atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg
     5041 ctgtctcaaa atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat
     5101 gagtgggacg gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt
     5161 gttttgacgt ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac
     5221 aaaggtctgc tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat
     5281 gagcaatacg gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa
     5341 gaccctcaag ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac
     5401 ggctctgatg ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg
     5461 ggcggtgatc ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct
     5521 gcctggggcc ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc
     5581 ctttcaaaac ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc
     5641 agcggtccgc ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt
     5701 ttgggtccga acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc
     5761 gaaaccatta ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa
     5821 gacaaactgc atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct
     5881 ccggtgaaaa aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct
     5941 gctcctgcag aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa
     6001 gccgaggaaa aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt
     6061 tgtgccgcct gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat
     6121 tgggccgacc gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc
     6181 aatacgatgc ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg
     6241 gttgactata tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt
     6301 atcggttatg aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc
     6361 ggttttaaac gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt
     6421 agtctttatt gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta
     6481 atggatacac aaatcaaaac tgaagccggt cagcagaata accggcgtta tctgaccgtt
     6541 tggcggtggc atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt
     6601 acgggtttgg gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat
     6661 gttgtgccgc aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc
     6721 gttaatccgg aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt
     6781 gccgtgttcc gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg
     6841 gcaaaagtgg tcagtaccat gccgcgcaat cagggttggt attacgcgat ggatgaaatc
     6901 cacagcgata tgatgctcgg ttcgacaggt gattatcttt tggaaacggc tgcatcgctg
     6961 acgattatca tgataatcag cggtttgtac ctttggtggg tgaaacggcg cggcatcaag
     7021 gcgatgctgc tgccgccaaa aggcagggcg cgttcttggt ggcggaatct gcacggcgcg
     7081 tttggaactt gggtgtcgtt gattttactg ttgttctgcc tgtcgggtat tgcttgggca
     7141 ggtatttggg gcggcaagtt cgtgcaggct tggagtcagt tcccggcagg caaatggggt
     7201 gtcgaaccga accctgtttc agtcgtgccg acccatggcg aggtattgaa cgacggcaag
     7261 gttaaggaag tgccgtggat tttggagctt acgcctatgc ctgtttcagg gacgactgtg
     7321 ggcaaagacg gcattaaccc cgacgagccg atgacattgg aaaccgtcga ccgttttgcg
     7381 cgggaaatcg gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta
     7441 tggactttgt cgcaagactc tatgagttac gatatgatta gtccgtttgc cgaccgcacg
     7501 gtgcatatcg accagtacag cggcaaaatc cttgccgaca tccgctttga cgattacaac
     7561 ccgttcggca aatttatggc ggcaagcatt gcgctgcata tgggtacttt gggctggtgg
     7621 agcgtgttgg cgaacgtttt gttctgcctt gccgtcattt ttatcggtat cagcggctgc
     7681 gtgatgtggt ggaaacgccg tccgaccgga gcggtgggca tcgttccgcc ggcgcagaaa
     7741 gtcaagctgc cggtttggtg gatgatggca ttgccgctat tggcaatcgc actgctcttc
     7801 ccgaccgcac tgcttgccat tgccgtgatt tggctgttgg ataccttgct gctgtcgcgg
     7861 attcctgttt tgaggagatg gtttaaatga cccgatgccg tctgaagcgt tcagacggca
     7921 ttttgtttga aggcgggcgg gggaaaggct atataatccc gaatacttga ccacagcttc
     7981 tgtttgaaat catgttttat ctgtatcaat ccaaccgtct tgaaacgctg gcggcactgt
     8041 ttgcccgcat tcaaaaagtc aaaccgctga aatcggtttt acagcccgaa cagattattg
     8101 tgcagagtca ggggatgcgc cgctacctca atacctgcct cgcccgcgat ttgggcgtgg
     8161 cggcgaattt gtcgttcagc ctgcccgccg gtctgacgtg gaagctgatg aaaaaactga
     8221 ttcccggtat tccggaactc agcccgtttg cgcctgaagt gatgcgctgg cggctgttgg
     8281 atttgttccg cagcgaggca tttcggaata cggcagaatt tgaagatgtg aggaatgtgc
     8341 tgcaagacta tctaggcagc ggcgaatcgg cagattatca gcttgcggga cagcttgcgg
     8401 acatattcga ccaatacctt gtctatcgtc cgcagtggat agacgcgtgg cagcagggca
     8461 ggatactcag tttgggcgac gacgaaatct ggcagtccaa actgtggcgt tacctcgacg
     8521 atggcaggca gagcgcgccg caccgtgtcg cgttgtggga aaagctgttg gaatctttaa
     8581 gcagtgataa gctgcccgag cgttatttcg tgttcggcat ttccacgatg gcgccgatgt
     8641 atttgcagct tttgcacaag ctgtccgaac attgcgatgt gttcgtgttt gcactcaatc
     8701 cgagtgggat gtattggggc aacgtcatcg aagcggcgca aatcctcaaa ggcggcggcg
     8761 atcccgattt aactcaggca gggcatccgc tgctcgcctc attgggcaag caggggcgcg
     8821 actttttcga ctttttgaac gaaatggaaa tagaaggaga aacgccggta tttgaagaag
     8881 gcgggcgcga tacgcttttg cacgccctgc aaaccgatat tcaaaacctg aaaatgccgt
     8941 ctgaaaatgt gggaagcgtc ggtacggatg acggttcgat acgtatcgtc tccgcgcaca
     9001 gccctttgcg cgaattgcag atactcaaag acaagctgtt gaaaattctg catgaacatc
     9061 ccgattggca gccgcatgat atcgccgtat taaccccgaa tatcgaatcc tatacgcctt
     9121 ttatcgaggc cgtgttcgga caggcgcagc ccggtgcgca ggcattgccg tattccgttt
     9181 cggacgtgaa aataagccgc cgacaaccgc tgtttcatgc tttgtcatgc ctgttcgact
     9241 tgttggaaag ccgatttgaa gtcgataaag tgcttgtgct tttagaaacc gcacccgtgt
     9301 tgcgccgttt cggactgact gaggacgatt tgccgctttt gcacgacatg gttgccgatt
     9361 tgaacgtccg ctggggtttg gacggagaaa tgcgcggcgg cacggatcag ctgtttacct
     9421 ggaagcaggc ggtagaacgc atgatattgg gctggatgct gcccgaaggc ggcaatccga
     9481 tgtggcagga tgtcagcgcg tggtatgccg acgtgaatca aaccgccatg ttcggacgtt
     9541 ttgccgcctt cctcgaaacc ctgtcggata ttgtacggat atggcggcaa cctgcgacgg
     9601 ttgatgaatg ggtaggacgt tgccgaggtt tgcttaaaac attgttccaa gccgaagccg
     9661 atgaccaaaa ggcagtccaa aacctcgaaa acgaatgggt caaatggcag gcggaaaccg
     9721 aattggcgca attttccgga cagttgccgc cgcacaccgt catccgccac atccgccgct
     9781 ttctcgacag cgaaagcgag gcaggctttt tacgcggcgg catcaccttt tgcagtatgg
     9841 tgccgatgcg gagcctgccc tttaaagtca tctgtctgtt gggtttgaac gacggagatt
     9901 ttccccgcaa taccaaagcc gccgtattcg acctgattgc caaacatccc gccaaaggcg
     9961 accgcgcccg ccgcgacgac gaccgctacc tcttcctcga agccctcatc agcgcgcgtg
    10021 aaatcctgta cctgtcctac atcgggcgcg acatccgcaa agacgaagaa ctggctccgt
    10081 cttctttgtt gggcgaactc atcgacacag ttgccgccat gaccggcaca aacagccgcc
    10141 aacttgcaca aaacctgata gaacagcatc cgctgcaagc cttctcgcgc cgatattttc
    10201 aagaaggcgg acgttcagac ggcatattcg gcacgcgtac cgactacgcc gccgcgctcg
    10261 gacaaacgcc cgaaccgccg caaccctttt tcgaccaatc cgtagaaaac gccgaacctg
    10321 ttgccgaaat cggacaggac gaatttatcc gcttctggcg caaccctgtc aaagtatggc
    10381 ttcagcagca gcttgcgtgg agcgaacccc atatcggcga agcttgggag cctgccgaac
    10441 ccttcgagcc gcaacacgcc gatcaaatcg ccgaaaccta catcgaagca cggcgcgaag
    10501 gacgggattt tgcccaaacc gccgcccgca tcggggcgga aagcctcctg ccgtcgggag
    10561 agttgggcag actttggcag caggacttcc aaaccgctgc caaacaaatc gacacggcgg
    10621 ttttaaacag ccccaaactg ccaccgcttt catatgccat accgtcggac gggcaaatcc
    10681 tgaaaggcag cttgggcaat ctgtaccgct gcggacaagt gttttacgcc tacggcaaac
    10741 ccaacgcgcc gcaacgtatc gcttttctgc tggaacacct gatattttgc gccgttatgc
    10801 cgtctgaagc cgaaacgcgg caaaccttta tcgtccaatc cggagaaacc gaaatattgg
    10861 cggaaatcgc gcaagacagg gcattgcagc tattgtcgga atggatggcg tttttcaata
    10921 tcgggcaaaa ccgcccgctg ccgttttttg ccaagacctc gcttgccgct gccgaagcgt
    10981 ttgcccaaaa acaagattgg gaagccgccc tgaaaaaagc ccaaaccgcc tattacggca
    11041 acaaagtcag caaagggcag aaagactata ccgaagtcgc cctcgtgttc ggcaacgcaa
    11101 gccaaaaccc actcgaacaa cccctgtttg aaaacctcgc ccgcctgctt gccgacacgt
    11161 ttgccgcagc ggaaaaaaag gaagaggccg gagcagcctg acgggatgga aaggcaaatg
    11221 ccgtctgaaa acagcaaaaa ggttttcaga cggcattttg tttatcgtgt ttaaggtgcg
    11281 ggatagaatg tgggcgcgcc gggaccgacg ggcaggccca aaacaaatac ccaaatgcag
    11341 aataaggcaa tccacgcaat caagaagaaa gcggaatacg gcaacatcat agaaatcagc
    11401 gtacccacgc ccgcatcttt tttgtatttg atcaccgtcg ccataatcag cccgaaataa
    11461 ctcatcatcg gcgtaataat attggtaacg gaatcaccga tgcggtaagc ggcttgaatg
    11521 acttcgggcg cgtagccggc caacatcagc atagggacga aaatcggcgc agttaccgcc
    11581 cattgcgcgg aggcggagcc tatcatcaga ttgataaaag cacaaattaa aataaaaccg
    11641 ataaacaaca cgctgccgcc caagccgact tcttttaaga acgtcgcccc tttaacggca
    11701 atatattgcc caatattcgt ccaattaaaa aatgcgacaa actgtgcggc aaaaaagatg
    11761 atgaccaaat aaagccccag agtactcatc gattcggcca tcgcattaac gacttcctgt
    11821 tcgccgcgca aacttcgggt tacccggcca taaacaatgc ccggcagcgc aaacaacaag
    11881 aaaataaaaa caacaatcga ttttaaaaac ggcgaaccgg aaaccaatcc tgtttcagga
    11941 tgacgcaaaa taccgtcggc agggacgatg ctccaagcca atagggcgga taaggcaaca
    12001 aacaccacgc cagcccaaat taatccttta tattccaaag gcgtgatttc attggaatgc
    12061 cgaatgtctt tttcttcttg tgacaaatct gattgataag ggcccaattg cggttcgacg
    12121 attttttcag taacaaaata accaatcaaa gcaatcacaa acgtactggc taccataaaa
    12181 aaccagttgg cttcagggcc tacgacgtag tcgggatgga tgatttgcgc cgcctgttgg
    12241 gtgatgcctg ccaagagcgg atcgattgtg cctaagaaca gattggccga ataaccgccc
    12301 gaaacgccgg cgaaagccgc agccagaccg gcaagcggat ggcggccgag ggaatgaaag
    12361 atgatggcgg acaaagggat taggacgaca tagcccaatt cagaagcggt attagataaa
    12421 atccctgtaa aaacaaccat aaaagtagtg agtttgcgtg gagattttgt gagcaataag
    12481 cgcattaatg cggaaatcaa gcccgatttt tccgcaatcc ccacgcccaa taaagaaacc
    12541 aacaccgttc ccaacggcgc gaaaccggtg aaatttttaa cggtatgcgt caggattttg
    12601 atcaaaccgt cagcatcgag caggctgaca acgtgaatca aaccgtcatc ggcacgtcct
    12661 ttcgcaccaa cagggcgcgg atcggggacg gatagtccga aatacgcacc ggcggcagag
    12721 gcaatcagca ataacacaat gaaaataata aaaagcgtaa ccgggtgcgg caacatattg
    12781 cccagccatt cgactgtgcg taaaaatcgt ccgtcccgtt gcgtatcggt ttgactcatc
    12841 tgcttctcct taaaaaaata tattgagtgc attaaatttt tgaatgtaac atgaagtgtt
    12901 ttgtaagcaa actaaaataa tcgtatatgt atataaccgt aatagattaa aacagaaaat
    12961 gcccacatcg ttattttcat aaaggcggta atccgaaaac ttgacgttaa agccttatca
    13021 ggaatgactg gaactcaaaa aaacggattc ccgcctgcgc gggaatgacg ggattttcgg
    13081 tttttgtttg caagaatgcc ggagaagaat gcagtttaca ttttgaatga tattgttatt
    13141 aattgtaaat aaatattgga aggtaaatga tatgaaaaat gaaattcaaa aaatcatgga
    13201 caaatataat ccatggcatg aagatgattt tgagtcgtat gaagacattg ccaaagatgt
    13261 atcgctgatg acagataaaa cgttcattga acattatttg ttagaagttt attcagaaga
    13321 aaacggacat tttgaccaag agaatatcca tgcgatgata ggggaaatta aaaatgcaat
    13381 ttagtgaata tgagaccttt gcaaaaatag tctgttaacg aaatttgacg cataaaaatg
    13441 cgccaaaaaa ttttc
//
LOCUS       DAXHRP010000041        12958 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.041, whole genome shotgun sequence.
ACCESSION   DAXHRP010000041 DAXHRP010000000
VERSION     DAXHRP010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12958
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.041"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..412)
                     /locus_tag="ACFM72_000876"
     CDS             complement(<1..412)
                     /locus_tag="ACFM72_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HFC6257468.1"
                     /translation="MTHISSPRNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWL
                     EMLLMTGMNFAGGSEFATVNLWAEPLPILLIATVTFMINSRHILMGAALAPHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNM"
     gene            555..1007
                     /gene="dut"
                     /locus_tag="ACFM72_000877"
     CDS             555..1007
                     /gene="dut"
                     /locus_tag="ACFM72_000877"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HFC6257469.1"
                     /translation="MNIEVEMKVLDERMADVVPVYATKGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLADPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            1083..2270
                     /gene="dapC"
                     /locus_tag="ACFM72_000878"
     CDS             1083..2270
                     /gene="dapC"
                     /locus_tag="ACFM72_000878"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HFC6257470.1"
                     /translation="MNTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            2532..3311
                     /gene="yaaA"
                     /locus_tag="ACFM72_000879"
     CDS             2532..3311
                     /gene="yaaA"
                     /locus_tag="ACFM72_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HFC6257471.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDVNTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRAQLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3394..3484
                     /locus_tag="ACFM72_000880"
     tRNA            3394..3484
                     /locus_tag="ACFM72_000880"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3428..3430,aa:Ser,seq:tga)
     gene            3562..3651
                     /locus_tag="ACFM72_000881"
     tRNA            3562..3651
                     /locus_tag="ACFM72_000881"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3596..3598,aa:Ser,seq:cga)
     gene            3842..4894
                     /locus_tag="ACFM72_000882"
                     /pseudo
     CDS             3842..4894
                     /locus_tag="ACFM72_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            5028..5408
                     /locus_tag="ACFM72_000883"
                     /pseudo
     CDS             5028..5408
                     /locus_tag="ACFM72_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
     gene            5844..6323
                     /locus_tag="ACFM72_000884"
     CDS             5844..6323
                     /locus_tag="ACFM72_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC6257472.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
     gene            7191..8108
                     /locus_tag="ACFM72_000885"
     CDS             7191..8108
                     /locus_tag="ACFM72_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005634 - nucleus [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HFC6257473.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMGRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(8166..8420)
                     /locus_tag="ACFM72_000886"
     CDS             complement(8166..8420)
                     /locus_tag="ACFM72_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HFC6257474.1"
                     /translation="MTPLPETESLQESKKMNINELGARIDRPTIRELIAYATCRNRPI
                     SNSTLLRMEKDGRIPCRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(8372..8512)
                     /locus_tag="ACFM72_000887"
     CDS             complement(8372..8512)
                     /locus_tag="ACFM72_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HFC6257475.1"
                     /translation="MDTLLKIIIALSFSGAEALAVWLFITAADAVLRRFPKPSHYRRV
                     KK"
     gene            complement(8512..8703)
                     /locus_tag="ACFM72_000888"
     CDS             complement(8512..8703)
                     /locus_tag="ACFM72_000888"
                     /inference="COORDINATES: protein motif:HMM:NF037202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type ISP restriction/modification enzyme"
                     /protein_id="HFC6257476.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            complement(8706..8999)
                     /locus_tag="ACFM72_000889"
     CDS             complement(8706..8999)
                     /locus_tag="ACFM72_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257477.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            complement(8996..9175)
                     /locus_tag="ACFM72_000890"
     CDS             complement(8996..9175)
                     /locus_tag="ACFM72_000890"
                     /inference="COORDINATES: protein motif:HMM:NF046041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO1622 family putative holin"
                     /protein_id="HFC6257478.1"
                     /translation="MQVKAENSLTAMRLAVADKQAEIDGLNAQIDAEIRQREAEELKD
                     YRWIHGDAEVPELEK"
     gene            complement(9291..9506)
                     /locus_tag="ACFM72_000891"
     CDS             complement(9291..9506)
                     /locus_tag="ACFM72_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257479.1"
                     /translation="MTITEEYSIDIRVTAEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRQALICLTKDNLKNAA"
     gene            complement(9576..10430)
                     /locus_tag="ACFM72_000892"
     CDS             complement(9576..10430)
                     /locus_tag="ACFM72_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HFC6257480.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTLLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGVIA"
     gene            complement(10455..10814)
                     /locus_tag="ACFM72_000893"
     CDS             complement(10455..10814)
                     /locus_tag="ACFM72_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257481.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVPNTSSTLKMVRSN"
     gene            complement(10882..11082)
                     /locus_tag="ACFM72_000894"
     CDS             complement(10882..11082)
                     /locus_tag="ACFM72_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257482.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            complement(11326..11751)
                     /locus_tag="ACFM72_000895"
     CDS             complement(11326..11751)
                     /locus_tag="ACFM72_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257483.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYDPTD"
     gene            complement(11854..12570)
                     /locus_tag="ACFM72_000896"
     CDS             complement(11854..12570)
                     /locus_tag="ACFM72_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HFC6257484.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
BASE COUNT         3130 a         2983 c         3336 g         3509 t
ORIGIN      
        1 gcatattgaa tgcgggcaaa ccggctgctt tccgtttttg gatttcggag aatgccatcg
       61 cccagctttc atcacacata aaaaacagtg cgggcacggc ttttttcagc ggtatttctt
      121 tcaggtgcgg ggcaagtgcc gcccccatca ggatatgccg agaattaatc ataaaggtta
      181 cggtggcgat aagcagtatc ggcagaggtt ccgcccacag gttgaccgtg gcaaactcgg
      241 agccgccggc gaagttcata ccggtcatca acaacatttc cagccagctc atgccttttt
      301 gtccaccctg cataccgagt attaatgccc aaggcaaaag cccgatcagc atgggcgaac
      361 tttctttgat gccgcgtata aattcgttac ggggcgagct tatgtgtgtc atattaatat
      421 tgatatgtaa gaaggtcggg cattatacac agacggagta tttcaaaaca aaacctattt
      481 gctgtgtttc agcgtaaaca cggcttgtgt ataatctccc atctttgaaa ccggccgtat
      541 gcaggagcaa gacgatgaat attgaagtag aaatgaaagt attggacgaa cggatggcgg
      601 atgttgtccc tgtctatgca acgaagggtt ctgcaggttt agatttgcgc gcctgtttgg
      661 atgaggaagt cgttttgcag ccgggtgaaa cgtttcttgt gccgacaggt ttggcaattt
      721 atttggctga tccttcatat gccgccgttt tgctgccccg ttccggattg gggcataaac
      781 acggcattgt tttgggcaat ttggtcggct tgattgactc cgattatcaa ggggaattga
      841 aggtttcgtt atggaacaga agcagcgagc cgtttactgt caaaccgttt gagcgtatcg
      901 cgcagatggt tatcgtgcca atcgtgcagg cgcgtttcaa acgtgtcgag gaatttgtcg
      961 gaagcagccg tggagaaggc ggtttcggca gtacgggttt gcattgaata taaaatgccg
     1021 tctgaagggc acgtcaggtt cagacggcat atcttccgat ataccgataa ccggagaaaa
     1081 tcatgaatac cttactcaag cagctcaaac cctatccctt tgcccgactg cacgaggcga
     1141 tgcagggcat ttccgcgcct gaaggcatgg aagccgtccc cctgcacatc ggcgaaccga
     1201 aacatccgac accgaaagtc attacggatg cgctgaccgc ctcattgcac gagttggaaa
     1261 aatatccgct gactgcgggt ctgcctgaac tgcgtcaggc gtgtgcaaac tggttaaaac
     1321 gccgttacga tggcttgaca gtggatgcgg ataatgaaat tctgccggtt ttaggcagta
     1381 gggaggcgtt gttttctttt gttcaaaccg tgttgaaccc tgtttcagac ggcatcaaac
     1441 ccgcaattgt cagcccgaat cccttttatc agatttacga aggtgcgaca cttttgggcg
     1501 gcggtgaaat ccattttgcc aattgccccg cgccgtcttt caaccccgat tggcgtagta
     1561 tttccgaaga ggtttggaaa cgcaccaaac tggtgttcgt ctgctcgccc aacaacccca
     1621 gcggcagcgt gctggatttg gacggatgga aagaagtttt tgatttgcag gacaaatatg
     1681 gtttcattat tgcctcggac gaatgctatt ccgaaatcta tttcgacggc aacaagcctt
     1741 tgggctgcct gcaggccgct gcacagttgg ggcgaagcag gcaaaaactg cttatgttca
     1801 ccagtttgtc caagcggtcc aatgttccag gcctgcgttc cggttttgtc gccggcgatg
     1861 ccgaactgct taaaaatttt ctgctttaca gaacctatca cggcagcgca atgagcattc
     1921 ccgtgcagcg cgcaagcatt gccgcttggg atgacgaaca gcacgttatc gacaaccgcc
     1981 gcctgtatca ggaaaaattt gagcgcgtta ttcccatttt gcaacaggta tttgacgtta
     2041 aattaccgga tgcctcgttt tacatctggt tgaaagtccc cgatggcgac gatttggcat
     2101 ttgcacgcaa tttatggcaa aaagccgcta tccaagtatt gcccggacgc tttttggcac
     2161 gggataccga acagggcaat cccggggaag gttatgtccg tatcgctttg gttgccgatg
     2221 tcgcaacttg tgtcaaagct gcggaagaca tagtttcact gtatcggtaa ggaatcggaa
     2281 atgccgtctg aacttttgtt cagacggcat ttttcaatat tctacggttg aatttgctgt
     2341 aacggtattt atagtggatt aacaaaaatc aggacaaggc gacgaagccg aagacagtac
     2401 agatagtacg gcaaggcgag gcaacgctgt actggtttaa atttaatcca ctatacttca
     2461 cttttaatcg gcttgcccgc aaacacgttt aaacttaaaa tccccgtgtt tgacacaata
     2521 ccgagcagat tatgtttttt gtcctttccc ctgcgaagaa ccttaatgaa aaagaccctg
     2581 cccctgtcag cgagtttacc caacccgacc tgctggcaga gtccgacatt ctaatgcagc
     2641 agttgcgcga gcttgcgccg caacagattg ccgaactgat gcacgtttcc gacaaaattg
     2701 ccctcttaaa cgcgcagcgc aatgcagaat ggcacacgcc gtttacgccg gaaaacgcca
     2761 aacaggcggt ctttatgttc aacggcgatg tttacgaagg tatggacgta aacacattgg
     2821 atattggaca gatacgctat ctgcaaaacc atgtccgcct gctgtccggt ctgtacggtc
     2881 ttcttcgccc gttagacctg atacagccct accgtttgga aatggggacg gcatttgcca
     2941 atttgcgcgg caagaatttg tatgagtttt ggggcgacat cattaccaac cttttaaatg
     3001 acacgcttgc ccaagcaggc agcaatacgc ttgtcaacct tgcctcacag gaatatttca
     3061 agtctgtcaa cacgaaaaaa cttcgggcgc agctgattac cccgatattt aaagacgaaa
     3121 aaaacggtaa atataaaatc atcagtttct atgccaagcg tgcgcgtgga ttaatggtgc
     3181 gctatgcggc agaacatcat attaccgacc ctgaaatgct gaaaaatttt aattacgaag
     3241 gctacgcatt caatgacgcg gcttcaaatg aaagcgaatg ggtttttatg cgttcggaac
     3301 aaataaagtg aaaacaataa attaagtatt ttccgaaaaa agtgcttggc aaaatgtata
     3361 aatttcatta ttattcctaa tcttcaagaa gacggaagcg tggcagagcg gtttaatgca
     3421 acggtcttga aaaccgtcga gggttgatag ccctccgtga gttcgaatct caccgcttcc
     3481 gccaatcctt gaggtcaaaa accaaataaa aatgaagtag cataaagcat cggcattttt
     3541 atttggtttt actgcattat cggaaacgtg gcagagaggc tgaatgcagc ggactcgaaa
     3601 tccgctgagg gtgcaaatcc tccgtgggtt cgaatcccac cgtttccgcc acaaaacaaa
     3661 accgccctga ttcggggcgg ttcttttttg ttcaagttgt gtcaattacc atataaaaat
     3721 catcggtttg ccctatcata acgcatcaaa gcaaatcatt tgcaatcttg cggcatcttc
     3781 ttattgcatt tttttatggt aatgtgtatg gtaatttttg gataaatggg aaattaccat
     3841 aatggcgaaa atcattacgc cgctgtcggc aaatcaggtt aaaaatgcga agccgcgcga
     3901 taagctgtat aagttgtcag acgggggcgg gctggctttg tgggtctacc cgacgggcgg
     3961 gcggagttgg aagctgtcgt ttgtgcagga tggaaggcag cagacaattt cgctggggcg
     4021 gtatcctgat ttttcgctgg ccgatgcgcg ggaatggcgg gaggaggtgc gccgaaaacg
     4081 ggcgcacggg gaaaatgtcg tcaataagaa ggtgcgggcg gattttgctt ttgagaaggt
     4141 ggcgcgtgat tggtttgtgc gttggtcgaa ggggcggtct gaaaagtatg ccggacaggt
     4201 tatgcggaat tttgagcggt gggtttttcc ggctatcggc aatcttgata ttcgtcaaat
     4261 caggacggcg gatgtggtcg gctgtctgcg tgtgatggag gcgcgcggta tcgttgatac
     4321 gttgcgcaaa acgaaaaaca gtctgaagat ggtgtttgcg tttgcggtcg gttcgggaat
     4381 gatggaaatc aaccctgtcg cgcaaatcgg ttcgggtgtg tttgaacggg cgaaaacggg
     4441 gaatatggca gcgttgagtc cgtctgaatt gccgcgcctg attgattttt tggagcagcg
     4501 caatgaattt gcggtttatg cgggcagggt gcgtatccat cctgtaacgc ggctttgtat
     4561 ctattggctg ctgttgacaa tgacgcggat tcaggaggcg gcgttgatgg agtggtcgga
     4621 gttggacggg gaggtttggc gtatccccgc cgaacggaaa aaggagcggc gggggcatga
     4681 tgtgccgctg tcgcgggcga tgcagtgggt gttggatcag gcgcgggcgt tgaatgtgaa
     4741 cgggcggttt gtgtttgaaa gtgtgaattt tcaagggcat atcaataagg aaagtccgcg
     4801 cgtggcgatg cagcgggcgg ggctggatac gacggcgcac ggtttgcgct cgcttgcgcg
     4861 tacttatttg cgcgaggttc tgaaggtgga tagtattatg cggaaacgca aataaaaaac
     4921 cgtttccgca tttttattgg aaggcttttt tgcaaccgct ttacacaaag gcggtttttt
     4981 gtgtaagaac tgctataata gcagcccgtc atcgtcagga gcggctaatg cctttaaaat
     5041 tccaaccaag ggaacgttcg gttatcatgt gcgactttcg cggttatgaa gaaccggaaa
     5101 tggtcaagaa acgccctgtc gtcgtcatag cgcgaaacag gcacaacggc aaactggtaa
     5161 cggtcgtacc cttaagcagc acagaacctg tccctttggc ggactaccac cacaaaatga
     5221 gtggaaaccc cttaccggac aagccgcaca tccaatgttg agcaaaatgc gacatgacgg
     5281 caacagtcgg attggcacga ttagaccgat acaaacccaa agggcgcgac cgctgcattc
     5341 caataatcag tgaagaggat tttcaggcga ttaaaacagc cgttgccaag gcattcaaac
     5401 tgtactagaa taaaaccgtt cccttaaagg ggcttgcaag actgttctga aatatgggca
     5461 gccgcgcacg ggcgacaggc gatgacaagc cgtccgtgcg tgtgatgggg cgcggaatgc
     5521 gccccttgtc gtatctgcaa acgcctacaa atccccaatc agcctttcaa tcaaggctgt
     5581 tttggacaaa cccgcctttg ccgcctcctg ttccagtttg gctatcgttg tgtccgcctt
     5641 aacgggcgat ttaagaaccg ctttacacga aggcggtttt tttgtatagt ccggttcacg
     5701 aggtacagaa tcttgaaaat agtcaagcaa tgccgtatat tccgacgcaa ggatttattt
     5761 tcaacatcag cttaagggga tgacaatggg acatatttat tcggaaagcc gtgatttccg
     5821 cctttcagac ggctgggacg gcaatgactg acaacctaat acagatagca acgccgatat
     5881 tgactgttat cggcgttttt gttgccgctt acggcatcat gaggaataca gaaaacgcca
     5941 aaaagcgcgc caccatcgac atgatcatgg ccgaacgtaa caatgccgcc cttcaagaag
     6001 ccataaccat agtaaacggg ctggcaaaaa cagacggatg catactcgcc acctatacat
     6061 cggatacccc ggacaagaag aaagaccgtg aagccatact gacagtttta aaccagcgcg
     6121 aatttgtctg tgcgggcgta ttgggcggag cactgcacga gaaaatgtat aaagatttcg
     6181 aatactccat gctgttacgt gactgggaca acctaagcag cttcattttt gaaatacgcc
     6241 gtatcaggag cgcaccgacg gcctttcaag aatttgaagc cgtagcccga aaatggaaga
     6301 aaaagcctct gaaaaccaaa tagcttaata gcttaacatc cgccgcaaca taggccgtct
     6361 gaaattcaga cggcctttca gtttgccgcc tacggttttt tgggaaaccc cttgcatgtg
     6421 caggggtttt gttttatatt cctgttcgtg gcgtcagaaa ccacactaca gcggcaatca
     6481 ctccgtcaat gtgatttttt catgtctata gttttctttc cttgttgttt gtttcgatag
     6541 caggaagttt ctatgaccgc gtgggcgacg aatacaagac ccgaaagggg aataagtccg
     6601 ccctcctatg tgggttctta accgcgcgtc cgcccatttg ggctaattct cttgacacat
     6661 ttccataact ctatataata tttcccacgg tgcttgaaaa cacctgacaa acagcgtata
     6721 tccaacacga tagagtggaa ttttttacgt ctatacgtat caaatcgatt tactcctatg
     6781 tgggggtgcg cctacccgta aggctggcgg cgcgtctgtt tgcgtgtttt caacacccct
     6841 gcgcccaatt tgggcattcc taaatcctac atgctgttga agaccgcgac cctatccgcc
     6901 acatggcggc ttttttatgc ttgcagaaaa tagaaagatt ggatatatta cgaaacacga
     6961 ggcgtcgaaa acctctacta gaacggcatt caccccgtca gcgtgaattt tttacgtcca
     7021 taagttttct tgtttggttg tttgtttcga tatatccgaa ctagtttcct atggtcggga
     7081 gggtgcggaa tacaataccc gcaaggggaa taacgccggc cttttctagt aggttttcga
     7141 acctcccgac cacccatttg ggtctttcga aactaaacta ggaaactatc atgaacgtat
     7201 ctgttctcaa ttttggtaac acccctgtat ctttccgtca agacggtttt ttaaatgcaa
     7261 ccgccattgc atctcacttt ggcaagttac ctaaagacta cctaaaaagt gaacaaactc
     7321 aacaatatat ctctgcactt gctgagaatt taagcgttag gagaaaaatc ctaacggaag
     7381 caaatcaaat agttatcgtg aagcgtggtg gcagtgagca aggcacatgg ctgcatccca
     7441 aactcgctat tcactttgcc cgttggctta atccgaaatt tgcggtttgg tgcgatgagc
     7501 agattgaaat tttacttaac ggcaaaattt cagacggcat aaaaacagtt acccccaaac
     7561 ccacccgcgc ccttccggac ggcttgaccg gcgaacaaat cgaagccgtc aaaaaactgc
     7621 acaacgccct gaccaaatcc gcacccaaag aagcgcaggc gcgtatcgcc attacccttt
     7681 ggtctgccgt caaaagcaag ttcggatgca gctacaaaga agtacctgcc gaacagttcc
     7741 ccgaagtttt aagcgtgatg ggccgcgtgg cagttgaaaa cggcgtgctg tacggcgaag
     7801 tcctcgaccg cgaaccattg cccgcaccgc aacctgccct gcccatcagc ggcaacgccc
     7861 tgtacgacct cgccgttgcc gtcagatacg gcgcgtgggc catccaaatg ggcagagacg
     7921 tttccctgcc gctgaagcag ctcggctgca aacaggcggt aacgatgtgg acggtctggg
     7981 cggaaacacg cagccgcctc aaagccgccg caaacgccct cgaagcctta aacgcacacg
     8041 ccgacgcgga acacgcggca aaaatccgcc cgatgctgcc cgaaatccgc aacctgtcgt
     8101 cggtttgatg cagtagggaa tacaaaagcc gtctgaatgt gaaaacgccc taatcgggcg
     8161 tttttttatt gctgtaaccc cagggcttcc aaaacttcgc gggtgtccca tacgggggat
     8221 gtgagtgggg ttttcagacg gcacggtatc cgtccgtctt tttccatacg cagcagtgtc
     8281 gagtttgaaa tggggcggtt gcggcaggtt gcgtaggcaa tcagttcgcg gatggtcggg
     8341 cggtctatcc ttgcgcccag ttcgttgatg ttcatttttt tactctcctg taatgactcg
     8401 gtttcgggaa gcggcgtaat acggcatcgg cggccgtgat gaaaagccat accgccaatg
     8461 cctcagcgcc ggaaaatgac agcgcgatga tgatttttaa tagggtgtcc atcaggcttt
     8521 ccttttttct ctagtttcgt actcataaat gaacatcggg aacgcctgcc cgcttctgac
     8581 aagatttaaa tccggtatct gatcggtaat cagacaagaa aaccgcccgt ccccgccgtt
     8641 tcccgtcgaa cagcaaatca caaggttgcc gccaaatgga atcgtatctt gattcgtgtt
     8701 catctttact gctccggcaa atacgtttta aaaatcaaat cttcaagtcg gcggtaaacc
     8761 ttcccggtct gcaccaatga ctcggtttcg ggaagcgcgg ccaaaagctt ccgcatatga
     8821 ccggcaatcg cctgtaacac aagctgctcg ccgcgcgttt tgttgtgttt ggcaaccatc
     8881 gccgccagcc cgtaaaccgc caagtccatc attgcctcca cgctgtcggc ttcagcggaa
     8941 tgcaagagat taatctctat gtcattcttg atgttctcgt tttcttcctg aaagttcatt
     9001 tttccagctc cggcacttcc gcgtcgccgt gtatccatcg gtagtctttc aattcttcgg
     9061 cttcgcgttg tctgatttcg gcgtcgattt gggcgttcaa cccgtcaatc tctgcctgtt
     9121 tgtcggcgac ggctaagcgc atagcggtca ggctgttttc agccttgact tgcactgcgg
     9181 cttcggatta cggttggcag gcgtagatgc cggcggctgc gactgcgagt aaggcggtgc
     9241 ggatcaagta tttcattttg attcctcatt attggggtaa cggcttaata tcaggcagcg
     9301 tttttgaggt tgtcttttgt cagacagatg agcgcttgtc tgacggcggc aaagggggtt
     9361 ttgtactctg gctctatgcc gacaagcagc tccccgtctg tgttgatgat gtcgcatccg
     9421 tagcgttcgg tggggtagcc gtagtcgttt ttcccctgtt ctgcggttac gcggatgtcg
     9481 atggagtatt cttctgtgat ggtcattttg gggtctttcg gagttgggtt tttgtggagg
     9541 tcgtctgaag gttcacaatt tcagacgacc tttttttagg cgattacgcc gaaatagatg
     9601 tcgatttcag ggaaggcttt ttgtacggct tcggaaatgt cttttgccgc ttgttcgatt
     9661 acagcatcga tttgctgcaa ttcgtaccac aggacgagtg cgccgctgtt tttgtcgatg
     9721 cggaatttca acagggcttc aacaaagtag gatgcaccgc cttgatgcgg ggtgaactcg
     9781 atgccgaaac gttcaaacat tttgaggttt ttctctgttt gccctgagtc ttcggattgg
     9841 aaggtaaagt tgattctgcc gtcctgttca cgatagcctt gtttgaaggt ggttttttcg
     9901 gtgtactcga gattgagcgc gaaatccaat acttcggcgg cggtcgggta aacggaattt
     9961 tcgttaccgg gatttttgga tacgatgttg cgggcattgt tggtcaggaa atgggaaaac
    10021 tccatctgat tcatgcggtg cgcattgttg ttcagccagt tggatgccga tgtagtgtgt
    10081 tgcggggtgt atacggcata aaaatcgagc cagcccggag cttgttgcgt atggccgttg
    10141 atgacggcgg tgacatcaat acgccctgat ttgaaatcgg catcaatgta gatttgtgtg
    10201 ccgtcctgtt tgtgtttttg tacaaactta ataagactgg cggtatcgtg catgaggaat
    10261 ttgccgcact tgcggtacgg gttttgcatc aattcggggt gtgatttgta tctccagcca
    10321 ccgtcttggt ctggtgtgaa tacaagcaga gtattgttcg gtgcaaactc aaaaaaaggt
    10381 ttttgagctg cttgtaaggc ggttttaatc atgttttctt gggtttccat tttagatttc
    10441 cttttgggtt tgagttagtt ggatctgacc attttcaacg tgcttgacgt attgggaact
    10501 tgtttgagtt tcaattttcc ttgtgccgga tcgtcggctt ggatgttgcc gtcaggtgta
    10561 gcaaagacga tgccgccttc gcgtttttct ttgggcagtt tggttgctac atcgtggctg
    10621 atttttaccg ttccgctttg gatgttttgg ggttggattt tgagcttgac agtaatttct
    10681 gactgtttac cgtgagcaag gcaggcacgc accgcttcac tcatggcttc gcctaattca
    10741 cggtctaacc agccgctatt tacggtcggt atttgcttgg aggcaggaac aaatttcttt
    10801 tcttgggttt ccatttttga ttttccttta aagaggggtt agttaggttg ccggtatcac
    10861 gggatgacaa taccgaggag gttatttaat tttgagaatt tccaaagatt ccacggtgga
    10921 gcgagctatt ccaaactcgt taagtgcggc aaagccggct gctggtatgg tggatgctcc
    10981 gtaatttatt tttggaataa aattttcgtt cagggcgacg gcggttcgtg cgagatttag
    11041 caaagcgtcg aaattttctt tagggatggt gatggtttcc atgtcggtac tccatgtggc
    11101 tgttgtttgt ttcgatgggt gtatttaaac atagcgttta ataatatgca acaatctgtt
    11161 taagattttt gtttaagatt tataaacatt ttgattatta aaagaattta tttttgagat
    11221 ttcgcaggcg caaaaaaacc gcctattaag gcggctttgt cggttttgtg ttgttttcag
    11281 gttcggcggg gcatgaaaaa agcccgcata atgcgggcgg gttgtttaat ctgtggggtc
    11341 gtatgccaca tcaactatca gcttcgtttt ccttaggtgt tggttgatag cataaatttc
    11401 gtgccatgcc ttgcttagat aatactgccg aagcatcggg attttagata gccggtgtgg
    11461 cattgggata tttcgtgcgc accatagccg caacagagtg tcttcgtcat cgatttggat
    11521 atgttttaag attaagccgc ttgaaccgac gggcaataga taccttgcgt cagggttggc
    11581 aaaatgctta ccggaaccat caaagtcata caatacattt ggcttgaggt ctttgtagtt
    11641 ctcttttctg cgcggcgcag atacttcgcc aagccactca aagcacaggg ttgctgttct
    11701 gtgatgcagc tcgtgaacct tcaactctcc ttgtacgcca aggaaattca taccggcatc
    11761 gtactcacca ggccaccaag gggaatcaaa acgcctattt ttgacaatct tgaaagccct
    11821 atcaatatta tctcgtcgta atagcaacat ttttcaatcc agcacgctcc accaaaatac
    11881 cctgccgata acggtcaggc tgtccaaggg ggcgttttcg tcgccataga aaccgctgtt
    11941 gtggctgcgt atcagaacgc tgttgccagg ctgccgtatc aggtacttca cgcggaacat
    12001 accgtcctgg gcgaaggcgt agattttgcc gtcgcgtatg gcggtttcgc ccgtatctac
    12061 ggcaattgcc gcgtcttctg cgattttttc ctccatactg tcgccggtca gggtgcagca
    12121 aaacacgttg tcgggattga tgcctttgcg tttaagcgtg gatttgccga acggcaggcg
    12181 gtagccgttg taatcgggga tttcatacgt gcctactccg cctttgaagc agctctcttt
    12241 gaggtagggg acgaaaacat aatcatcgtc gggcagcggg tcgttgctgc tccacgtcat
    12301 cgggcggtgg atgtctttga cttcgtgggg taggtcgggg tcaataagga cgggcgcggt
    12361 tcggctgcct tcacctgttc tcagccatgt ttcagataca ccgaatgctt ttgctacttc
    12421 aggcagcgcc tttgccgcta tgccacgact ttcccagttt ttcaaagcct gttggctgat
    12481 attcagacgc tctgctatgt cagccggctt taaaactccc tgctctttgg ctatctcaaa
    12541 aagtctgtca gttgtctcgt gcattgtcat ttttaatctt attcgcggtt ggcttaatta
    12601 ttctcccata tttaaacaaa atgttgttac acaagacttg atttttatct aaacatagtg
    12661 tttaatatta gcattagatt taaacatttg gtttatttat ggataaaaga gtcaatgaag
    12721 acaaacgcct gttgcaatca atcggcagtt acgcggaagt tggtcgaata acagggaata
    12781 gccctcaatg cgttttcaat tggacgaagc gcgggatacc tgcacgaata aaacttaagt
    12841 atcccgacct gtttttgaac tcaaagaaac cagacgacca acccaaataa aaaaagcctg
    12901 tcgtggaaag ctcgccgcgg gctggggaag ccgcattgat gacgataatt tttaatat
//
LOCUS       DAXHRP010000042        12941 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.042, whole genome shotgun sequence.
ACCESSION   DAXHRP010000042 DAXHRP010000000
VERSION     DAXHRP010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12941
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.042"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..1169)
                     /gene="hemW"
                     /locus_tag="ACFM72_000897"
     CDS             complement(<1..1169)
                     /gene="hemW"
                     /locus_tag="ACFM72_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HFC6257485.1"
                     /translation="MHAISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETVFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     ATALKLFDKINIDLMYALPNQTVRTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHSALENGGFIHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQC"
     gene            complement(1226..3751)
                     /gene="ligA"
                     /locus_tag="ACFM72_000898"
     CDS             complement(1226..3751)
                     /gene="ligA"
                     /locus_tag="ACFM72_000898"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HFC6257486.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPEFKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSILSEAELLTLLG"
     gene            complement(3899..5185)
                     /locus_tag="ACFM72_000899"
     CDS             complement(3899..5185)
                     /locus_tag="ACFM72_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HFC6257487.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGQPSGGPVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(5379..5951)
                     /gene="ampD"
                     /locus_tag="ACFM72_000900"
     CDS             complement(5379..5951)
                     /gene="ampD"
                     /locus_tag="ACFM72_000900"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HFC6257488.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFGGREKCNAFSIGIELEGCDFEPFAEAQYRSLEALLDAICRRYPVTAVTGHQD
                     IAPGRKTDPGHFFDWRRIREKGFPVDRNAV"
     gene            6035..7030
                     /gene="mltG"
                     /locus_tag="ACFM72_000901"
     CDS             6035..7030
                     /gene="mltG"
                     /locus_tag="ACFM72_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HFC6257489.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            7090..7710
                     /gene="tmk"
                     /locus_tag="ACFM72_000902"
     CDS             7090..7710
                     /gene="tmk"
                     /locus_tag="ACFM72_000902"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HFC6257490.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQAD
                     FFMRVRSVYLDRAAACPERYAVIDSNLGLDEVRNSIEKVLDRHFGC"
     gene            7932..9212
                     /locus_tag="ACFM72_000903"
     CDS             7932..9212
                     /locus_tag="ACFM72_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HFC6257491.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            9448..9651
                     /locus_tag="ACFM72_000904"
     CDS             9448..9651
                     /locus_tag="ACFM72_000904"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257492.1"
                     /translation="MKEMKPVRYHIGDMPETSKQTASRHDDRAVGVDDDCFHDSFGQF
                     LFGCSAEATRTAPISVKRSCLFT"
     gene            9759..10808
                     /gene="lpxK"
                     /locus_tag="ACFM72_000905"
     CDS             9759..10808
                     /gene="lpxK"
                     /locus_tag="ACFM72_000905"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HFC6257493.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAASRAEDAGDEPLLLFSKTGAPTAVGSSRAEVGRALLAAHPDIGLIVADDGLQ
                     HYALQRDVEIAVFPSADTARQDLDLLPNGNLREPLSRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRHMGITLNQ
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGIGLNHIWVLPVCAIIEPDLAEFVL
                     ERLEGAEGRLKARFG"
     gene            10998..11579
                     /locus_tag="ACFM72_000906"
     CDS             10998..11579
                     /locus_tag="ACFM72_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HFC6257494.1"
                     /translation="MKLKTLLLPFASLALCAGAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKAFAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            11648..11830
                     /locus_tag="ACFM72_000907"
     CDS             11648..11830
                     /locus_tag="ACFM72_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HFC6257495.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            11827..12588
                     /gene="kdsB"
                     /locus_tag="ACFM72_000908"
     CDS             11827..12588
                     /gene="kdsB"
                     /locus_tag="ACFM72_000908"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC6257496.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            12611..>12941
                     /locus_tag="ACFM72_000909"
     CDS             12611..>12941
                     /locus_tag="ACFM72_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC6257497.1"
                     /translation="MQQHIEKWQHLSREEQKILAEVWGLVQNDDQEVHYEMLKLNAPD
                     EASGEFWFRMAETLSTLPPNRSLDLRMNGGRLATAVSILSVMIEDNPDIPQLWAQKIT
                     ALNYSGLN"
BASE COUNT         2864 a         3221 c         3815 g         3041 t
ORIGIN      
        1 aaacattgca gcaaatcgtt taaaaacaag cgtccttttt cggtcgggcg gaatacggcg
       61 gggtcggttt ccagcaggcc tttttgcctt gctgtttcga tttgcgccat gattttggca
      121 ctcggtacgc ccgtgcgttc ctgcaacatc gcggcgggta cgccgtcggt caggcgcagg
      181 gcgttcatca tgaactcaaa cggcaaatct tcggcggcga cggttttgcg ttcgacggct
      241 tcgctcggtc ggttttgcat taaggcgagg tagtcgttgg ggtggcggcg gcggacggtg
      301 cgttcgatgc ggtcgggata ggagattttg ccgtgcgcgc ccgcgccgat gcccaaataa
      361 tcgccgaact gccagtagtt caaattgtgg cggcactgca tggcgggttt tgcaaaagcc
      421 gatgtttcgt agtggataaa gccgccgttt tctaatgcac tgtgtaccgc gtcttcgatg
      481 tcgagggcgg cttcgtcttg cggcaaacct ttcggcggcg tgtgtccgaa cggcgtgttc
      541 ggttccatcg tcaggtgata cgcgctgatg tgggttgcgc ccgtggcgat ggcggtttgt
      601 acgtcatcca atgccgtccg aacggtttgg ttcggcaggg cgtacatcaa gtcgatattg
      661 attttatcaa ataatttcaa ggcagtagct atggcggtta aggcttcttt accgttgtgg
      721 acgcgcccca gccttgagag catatcgtcg ttgaagcttt gtacaccaat agaaagccgc
      781 gtgatgcctg cgtctttaaa tccttgaaac ttctcgattt caaatgtccc cggattagct
      841 tccaacgtaa tttccgcttc cggctgtaag cgcaacagcg aacgcacgcc gctcaacaaa
      901 cggtcgatcg attccgcctg aaacaggctg ggcgtaccgc cgccgaaaaa taccgtttcc
      961 accggcctgc cccaaatatt gggcaattca agctgcaagt cggtcagcag cgcgtcgata
     1021 taggcggctt cgggcaatcc gtttttcagg ctgtgggaat tgaagtcgca atacgggcat
     1081 tttttgatgc accacgggat gtggatatag agcgacaggg gcggcagggc ggtgagccgg
     1141 gtgcggtttg gaaaggaaat ggcgtgcatg gtgtggttcg gaaaagtgga caatgccgtc
     1201 tgaaggcggt tcagacggca caggttcagc cgagcagggt aagcagttcg gcttcgctga
     1261 ggatggaaac acccaaggca ttggcttttt ccagcttgct gcccgcggct tctccggcga
     1321 cgacgtagtc ggtttttttg gacacgctgc cggaaacttt gccgcctgcg gcttcgatta
     1381 gggattgggc ttggtcgcgt ttgagcgtgg gcagggtgcc ggttaataca aaggttttgc
     1441 ctgctacggc tttattgatg ccgtctgaac cttgcgccgc ctcgtcttca gacggcattt
     1501 gcgcgaagaa ggttttcagg ttttcgagta gggcggcgtt ttgtggttcg ctgcgccatg
     1561 cttgccagtc ggcggggagg gctttgtcgt tttgtagacc ttctatgttt ttaccagcga
     1621 gttcccataa ggcttgggct ttgttttcgc taattttgaa gtcgggcagg cgggcgatcc
     1681 agcgttgcgg ttcggcgtgg cgggcgggcg ggatggtaac ggcttgggtt tgcggggcaa
     1741 cgcctgcggc gagcagttcg tctatcatcg cctgctgttc ggcttgggcg aagaagtggg
     1801 caatggaatg cgccactacc gtaccgatgt cgggcaggca ggcgaggacg ggttcggggg
     1861 cgcggcggac gcgttccaat gtgccgaatg cctgcgccag cgttttggcg gtgcgttcgc
     1921 cgacgtggcg gatgccgagc gcgaacagga agcgcgcgag ttcgggcgtt ttgccggatt
     1981 ctatgccccc gaggatgttt tccgcccact tgaccggttg ttttttatgt ttgcccgacg
     2041 cgccgaccga actgccttca gacggcgttt gatccgattc ggcaacggtt ttgtccgtcg
     2101 tttctttcat tttttgcagg gtcggaatat cgaggcggta gaggtcggcg aagtggcgga
     2161 cgaggtcttg ggcgacaagc tgttcgattt gtttttcacc caagccgtcg atgtccatgg
     2221 ctttgcgcga ggcgaagtgg attaagcctt gcgcgcgttg tgcctgacaa agcataccgc
     2281 cgctgcatcg ggcgacggct tcgccttctt cgcgttcgat ttcgctgcgg cagatggggc
     2341 aatgggtcgg caggcggtag ggcttgtgga gcggaacgga ttgggtttga ttagcggacg
     2401 gtgtttcggc aaacaaatcg tcctgccgat gcccgatgcc gtctgaaaca gcaacggcgg
     2461 tttcctgcat cgggcggcgt tcaaaaatca cacgcacgac ttcgggaatc acgtctccag
     2521 cgcggcgcac gacgacggta tcgccgacgc gcacgtcttt tcgggaaact tcgtcctgat
     2581 tgtgcagggt ggcgttggta acggttacgc cgccgacgaa tacgggttgt aatcgggcaa
     2641 ccggcgttac cgcgcccgtc ctgccgattt gcacgtcaat cgcttcgaca atggtcaggg
     2701 cttcttcggc agggaatttg tgggcaatcg cccagcgtgg cgcgcgtgag atgaagccga
     2761 gttcgcgctg ttgcgccaag ctgttgactt tgaccaccat accgtcgatt tcgtagggca
     2821 gttcggggcg tttttgctgc atttgttcgt aaaacgccaa tacttcgtcg atatttttga
     2881 aacagccgaa attgccattt ggcagactga agccgagtgc ttggaaatag gcgagttctt
     2941 ggatgtgttc ttccgcgacg aaaccgcctt gctggcgggc gacggagtag gggaaaaagt
     3001 gcagtttgcg ttgcgcagtg atgcgcgaat cgagttggcg caggctgccg gcagcggcgt
     3061 tgcgcggatt ggcaaagggt ttttgcccgt tttcggcttg tcttttattg agggcggcaa
     3121 aatcggcttt ttgcatcagt acttcgccgc gtacttcgat gagttcgggc gtattttcgc
     3181 cgtgcagccg cagggggatg ttggcgacgg ttttgatgtt ttgggtaacg tcttcgcccg
     3241 ttgtgccgtc gccgcgcgtt gccgcctgta ccaatacgcc gtcgcggtag agcaggctga
     3301 tggcgaggcc gtcgaatttg ggttcgataa cgtattcggg attgccgccg tccaaaccgt
     3361 cgcgcacgcg ttggtcgaaa gcgtacattt cggcgtggtc gaacacgccg ttttcatctt
     3421 gcggggaaaa ggcgttggtc agcgacagca tcggcacttc gtggcgtact tcggcaaatc
     3481 ccgccagagg ctcgccgccg acgcgctggg tcgggctgtc gggcagtttg aattcgggat
     3541 ggtttaattc caacgcttcg agctcgcgga ataatttgtc gtattcggca tcgggtacgc
     3601 tgggcgcgtc gagggtgtag tattcgtagg catagcggtt gagcaggtcg gtgaggtggc
     3661 ggatgtgttg tgcggcaaat tgttttatat cactatcaga cggtttaaga agattggtaa
     3721 agttagtgtt atgttttgag tttggattca tgagagaagg ttttcagacg acctttgtct
     3781 gatacgggat gaaacgggca aaggtcgtct gaaaaatgat aggttgaaaa cagctgaatt
     3841 ttacccgaaa aaaagcggat atgccgtaac gacatatccg ctttgattgc attcgatttt
     3901 aggagaacag gcgcaatgcg gttttgccgc ccggttcgat accgactttg agcatctcgg
     3961 actgacgagc caatacataa gtgcgtacgt ctttgagcca ttgggtcgaa acttcttcca
     4021 ttttgtcgtt gaccagattc aggttcaact ggccggacag gcgtaccgcc aaatccataa
     4081 acaaatcgtc gaaggttttt tcgcctgccg gagagtgcgg gatgtcgagc agcatactga
     4141 agcctttgta ggactggttg tccaaaaggg cattggtaaa cggctcgttg ttgagcgagc
     4201 agatggagaa catggttgag cccgacgtgt cggtatagtg gaacgcgccg tcgtcttcca
     4261 aaacgaaacc cacgcccgtt acggcggaac gcagttctac gccgctgatg ctggtcgggg
     4321 aaaccaaatg gatggcgatg gtctggtcga cgcgcgcgca gaatgcgtcc agtgcggaag
     4381 ccacttcgat aaaggcggca aggtcggtgt gcagcgtctg accgcccatg ctttgtgcga
     4441 atgcgtccac ctggcggttg aatgcggaga gttcttcctg cgaggcaagt ccgttgcggc
     4501 tgactgcctg aatacccacg ataaatgcct gatagcggat gcccgggatg ggttcggcaa
     4561 tctggaaatg gtcgtccatg gtgcagccga caatctggta gcggcagcgg ttggaaaggc
     4621 gcggcagtgc gtgcagttct ttggcttcgg tcagcgcgat ataggagatg aagtcgaagc
     4681 gcacgtcaaa ccagggtaat tcgacttttg acagttcttt gagcgtaatc agcggttttg
     4741 caggtgtttg cggaacgggt gcaggttttg ccggcgcgtc ggcaggtttc ggtgcggaat
     4801 gtccggtttg gggttcggaa acggtgtggg cggagttgcc gataatgccg ctttcttcca
     4861 aggcggtttc gatttcggtt ttgaacgggg aggcttttgc ctgtttctgc ttggcgatgt
     4921 agacggcatc ctgttcttgc aggttgcgca tggcggggtc ttggggtttt gccgtttttt
     4981 tgaccgccgg ttggggtttc ggcatcatga ctggcccgcc ggacggttgg ccgtcgcgga
     5041 catggctggt tttgctgttg agcagggcat ctttgtcgga gtgtccgaac tggtcgcgca
     5101 cttttttgcg gtattggttt tcctgataca tattgtaggc gacaacggcg aggacggcgg
     5161 cgaggaacag tacgatgtaa atcatggcaa tcactttaaa tttcgggatg caggatgcgc
     5221 gaagtgcggg tactgcggtt aaatcgggct tgcgtttccg gcagtctgat ggaacggccg
     5281 gttataacgt ttgaattata acgaaaattg cagggtctga cagcagtgtg tcgaaataag
     5341 cggaaatttt ccgaaatgcc gtctaaaatc tgtggttttc agacggcatt tctgtctacg
     5401 ggaaaccctt tctcccgtat ccgccgccag tcgaaaaagt ggccggggtc ggttttgcgg
     5461 ccgggcgcga tgtcctgatg tccggttact gcggtaacgg ggtagcggcg gcagattgcg
     5521 tccaacaagg cttcgagcga acggtattgc gcttcggcaa acggttcgaa atcgcagcct
     5581 tccagttcga tgccgattga aaatgcgttg catttttccc tgccgccgaa tgaagatacg
     5641 ccggcatggt atgccatatt gtcgcaggaa acgaactgta ccgtttctcc gtcgcgtttg
     5701 attaagaaat ggctggatac gcgcaaagtg tgtatcaggc tgaagaacgg atgtccgtcg
     5761 gggtcgagcc ggttggcaaa cagcttttcc accgcatctg tgccgtattc gaacggcggc
     5821 agcgaaatgt tgtgcaacac gatcagggaa accgtttccc ccgtttccct cgggctgaaa
     5881 ttgggcgacg gggtatggcg tatgctttga agccagccgt tttgccagtg tgcttcggcg
     5941 tgattgtcca tgatgttctt cctgtccggc gggtaatttg ggttatactg tcgcccgaat
     6001 tttaagacgt attccgaatg ctgggaatcc taccatgttg agaaaattgt tgaaatggtc
     6061 tgccgttttt ttgaccgtat cggcagccgt tttcgccgcg ctgcttttcg tccctaaaga
     6121 caacggcagg gcatacagga ttaaaattgc caaaaaccag ggtatttcgt cggtcggcag
     6181 gaaacttgcc gaagaccgca tcgtgttcag caggcatgtt ttgacggcgg cggcctacgt
     6241 tttgggtgtg cacaacaggc tgcatacggg gacgtacaga ctgccttcgg aagtgtctgc
     6301 ttgggatatc ttgcagaaaa tgcgcggcgg caggccggat tccgttaccg tgcagattat
     6361 cgaaggttcg cgtttttcgc atatgaggaa agtcatcgac gcaacgcccg acatcgaaca
     6421 cgacaccaaa ggctggagca atgaaaaact gatggcggaa gttgcccctg atgccttcag
     6481 cggcaatcct gaagggcagt ttttccccga cagctacgaa atcgatgcgg gcggcagcga
     6541 tttacggatt taccaaatcg cctacaaggc gatgcaacgc cgactgaatg aggcatggga
     6601 aagcaggcag gacgggctgc cttataaaaa cccttatgaa atgctgatta tggcgagcct
     6661 gatcgaaaag gaaacagggc atgaagccga ccgcgaccat gtcgcttccg tcttcgtcaa
     6721 ccgcctgaaa atcggtatgc gtctgcaaac cgacccgtcc gtgatttacg gcatgggtgc
     6781 ggcatacaag ggcaaaatcc gtaaagccga cctgcgccgc gacacgccgt acaacaccta
     6841 cacgcgcggc ggtctgccgc caaccccgat cgcgctgccc ggcaaggcgg cactcgatgc
     6901 cgccgcccat ccgtccggtg aaaaatacct gtatttcgtg tccaaaatgg acggtacggg
     6961 cttgagccag ttcagccatg atttgaccga acacaacgcc gccgttcgca aatatatttt
     7021 gaaaaaataa accatgccgt ctgaaaagtt tgtgttttcg gacggcatac ccttaccgga
     7081 actgcaagca tgaaaccgca attcatcact ttggacggca tagacggtgc cggcaaatcc
     7141 accaaccttg ccgtcatcaa ggcatggttt gaacggaggg ggctgcccgt gctgttcacg
     7201 cgcgaaccgg gcggaacgcc ggtcggtgag gccttgcgcg aaatcctgct caaccctgaa
     7261 accaaagccg gtttgcgtgc ggaaacactg atgatgttcg ccgccagaat gcagcatatt
     7321 gaagacgtga tattgcctgc actttcagac ggcatccatg tcgtgtccga ccgttttacc
     7381 gatgcgacct tcgcctatca gggcggcggg cggggaatgc cgtctgaaga cattgaaatt
     7441 ttggaacatt gggtgcaggg cggtttgcgc cccgatttga ccctgctgtt ggatgtgccg
     7501 ctggaagtgt cgatggcgcg tatcgggcag acgcgcgaga aagaccggtt cgagcaggaa
     7561 caggcagatt tcttcatgcg tgtgcgcagc gtttatctcg accgagccgc cgcctgtccg
     7621 gaacgttacg ccgttatcga cagtaacctc ggcttggatg aagtcagaaa cagcatagaa
     7681 aaagtgttgg acagacattt cggctgttga tgcggcaaat attgaaacaa gcgcatccgc
     7741 ccgcgccgaa aatcaaacgg cagtgccgca ggtgaaaatg gcggtatgcg ccaaactttc
     7801 ggcatgatag aattacgctc ggttacaagg caggatgcgt cggcaatatt aacgaaccgc
     7861 ccgtaacatg atgacccgaa agcgtttcgg acagtccgat tcaaatcttt ttctcgcaac
     7921 aggattgaca catggaaaac tcattgaaag aagccgccct caagttccac gaattacccg
     7981 ttccgggcaa aatttccgtt accccgacca aatctctggc gaccgacaaa gatttggcgt
     8041 tggcgtactc tccgggcgta gccgctcctt gtatggaaat ccatgccgat ccgcaaaatg
     8101 cctacaaata caccgccaaa ggcaacttgg tcgctgtcat ttccaacggt acggccgttt
     8161 tgggcttggg cgacatcggc gcgctggcgg gcaaacccgt gatggaaggc aaaggcgtat
     8221 tgttcaaaaa attcgccggt gtggacgtgt tcgacatcga aatcgatgaa aaagacccgc
     8281 aaaaactcgt ggacatcatc gccgctttag agccgacctt cggcggcatc aacctcgaag
     8341 acatcaaagc acccgagtgt ttctacatcg aacgcgaatt acgcaaacgc tgcaaaatcc
     8401 ccgtattcca cgacgaccag cacggcacgg ccatcattac cgccgccgcc gtattgaacg
     8461 ctctgcgttt taccggccgt aaaatcgaag aagcgacctt ggtttgctct ggtgcgggtg
     8521 cggccgcgat tgcctgcttg aaccaattgc tggatttggg cttgaaacgc gaaaacgtaa
     8581 ccgtttgcga ctccaaaggc gtgatttacc aaacccgcga agacaaagat cgcatggacg
     8641 aatccaaaaa attctacgcc gttgaagaca atggccagcg cgtacttgcc gatgccgtca
     8701 aaggtaaaga catcttcttg ggcctctccg gcgcgaacct gctgaccccc gaaatgttga
     8761 acacgatgaa cgaaaaaccc atcgtgttcg ccatggccaa cccgaatccg gaaatcctgc
     8821 cgccgctggc aaaagaaacc cgtccggacg tggttatcgg taccggccgt tccgacttcc
     8881 cgaaccaagt caacaatgta ttgtgcttcc cgttcatctt ccgcggcgcg ttggatgtcg
     8941 gcgcgaccac catcaacgaa gaaatgaaac gcgcctgcgt gtatgctttg gcggatttgg
     9001 cgatggaaga agtaaccgaa gaagtggttg ccgcttacgg taagaaattt gaattcggcg
     9061 cggaatacct gattccgact ccgttcgatt cccgcctgct gccgcgcgtt gctacggctg
     9121 ccgccaaagc agcgatggaa agcggagtgg caacccgtcc gattgcagat ttggaagctt
     9181 acgctgccaa gctgagcgaa tggaagctgt aagccgtttg cggtttaaaa tgccgtctga
     9241 actgttttca ggcggcattt tgctgtcaga ttgatatagt ggattaacaa aaatcaggac
     9301 aaagcgacga agccgcagac agtacaaata gtacggaacc gattcacttg gtgtttcagc
     9361 accttagaga atcgttctct ttgagctaag gcgaggcaac gccgtactgg tttttgttaa
     9421 tccactataa atgaaagata ctggaaaatg aaagagatga aacctgtccg ttatcatatt
     9481 ggcgatatgc ccgagacttc aaaacaaacc gcctcccgtc atgacgacag ggcagtgggt
     9541 gttgacgatg attgttttca tgattccttt ggtcaatttt tgtttgggtg ttcggcagag
     9601 gcaacccgaa ccgcgccaat ttctgtaaag cgcagttgct tatttacctg attggttcgc
     9661 ttatcggttt ggtcttcgcg ttgtttatag gtgggtctgt atcaggtacg catgattaat
     9721 gccccgggct gattttgctt cgaggatttg tatcgaatat gccgaattgt ttcaaatttc
     9781 ataccgttat cgaacggcat tggcaaaaac cttatccggt tttgtctttt ctgcttaagc
     9841 cgctctccgg gctgtttgcc aaaattgcgg caaaacggcg gacggatttt ttatcgggaa
     9901 aacggcaaag cgaaaagctg cccgtgcctg tggtcgtggt cggcaacatc cacgcgggcg
     9961 ggacggggaa aacgccgatt gttgccgcgc tggtgtcggg tttgcaggaa aagggcgtca
    10021 aggtcggcat catcagccgg ggctacgggc gtaagagcaa ggcggttcat gtattgaatg
    10081 ccgcaagccg agcggaagat gcgggcgacg agcctttgct gctgttcagc aaaaccggtg
    10141 cgccgacggc ggtgggcagc agccgtgcag aggtaggcag ggcattgctg gcggcgcatc
    10201 ccgacatcgg actgattgtg gcggacgacg gtttgcagca ttacgcccta cagcgggatg
    10261 tagaaatcgc ggtgtttccg tctgccgaca cagcaaggca agatttggat ttgctgccca
    10321 acggcaattt gcgcgaacct ttgtcgcggc tggattcggt ggatgcggtc gtcgtcagcg
    10381 gcggcaaggc ggatgcgctg tttaggccgt ctgaaaatat gtttcacagc cgtatcgaag
    10441 cgggacgaat ttaccgtttg aacaatccgt ccgaaatact ggacacaggc cgtctgaaaa
    10501 atcaaaccgt cgtcgccgtg gcaggtattg ccaagccggc gcgttttttc gattcgttgc
    10561 ggcatatggg catcaccttg aaccaaaccg tcgcgctgcc cgaccacgcc gatatttcgg
    10621 cggcagatct gcccgatgcg gacgcggtga ttattacaga aaaggatgcg gtcaagtttt
    10681 cagacggcat cggtttgaac catatatggg tgctgcccgt ttgtgcgata atcgaacctg
    10741 atttggcaga atttgtgctg gagcggttgg aaggtgccga aggccgtctg aaagcgcggt
    10801 ttggatgaag tgataacgga ctggaataag aacgccctac gccgtcattc ccgcgcaggt
    10861 gggaatctgg atcttgattt ttcagaaatg accaagaggt ttccgaagtc ctaaatctcc
    10921 ggattcccgc ctgcgcagga ataatggaag ccggttgtat tttttatctg cattaatcat
    10981 ttgttaaagg attgaatatg aagctgaaaa ccctgttatt acctttcgcc tctttggcat
    11041 tgtgcgctgg tgcttttgcc gccccgccca gcgacgcgtc gctggcgcgt tggctggata
    11101 cgcagaattt tgaccgggat atagaaaaaa atatgattga gggctttaat gccggattta
    11161 aaccgtatgc ggacaaagcc tttgccgaaa tgccggaagc gaaaaaagat caggcggcag
    11221 aagcctttaa ccgttatcgt gagaatgttt tgaaagattt gattacgccc gaagtgaaac
    11281 aggctgtccg caatacttta ttgaagaatg cccgtgagat atacacgcaa gaagaaattg
    11341 acggcatgat tgccttttac ggttcgcctg tcggtcagtc cgtcgttgcc aaaaatccgc
    11401 gcttaatcaa gaaatcgatg agtgaaatag cagtatcttg gactgcattg tcagggaaaa
    11461 tcgcgcgaca tcatctgccc gcgtttacgg aagagttgcg gcgcatcatc tgcggcggta
    11521 aaaatcccga tgcgggctgt aaacaagccg gacaggttgg gaaaaggcat cagaaataaa
    11581 tgatagccgt ctgaaatatt gaagagggca tccgattgat tgaaccatca aacccgaaag
    11641 caaccctatg gaaaaaaaat tcttagacat cctcgtctgc cccgttacca aaggcaggct
    11701 ggaatatcat caggacaaac aggaattgtg gagccgtcag gcgaagcttg cctatccgat
    11761 taaagacggc attccctata tgctggaaaa cgaagcgcgt ccgttgggcg aagaggaact
    11821 cgaagcatga ccgaattcgt cgtattgatt ccggcgcggc tggattcgtc gcgcctgccc
    11881 ggaaaagcct tggcggacat ccacggcaaa ccgatggtcg tgcgcgttgc cgaacaggcg
    11941 gcaaaaagta aagctgtgcg cgtcgtcgtt gccaccgacc atcccgatat tcagacggcc
    12001 tgtcaggcgc acggcgtcga agtcgtcatg acttcaaacc ggcacgaaag cggcacgacg
    12061 cgccttgccg aagcctctgc cgcgctgaag ctgccgccgc atctggtggt tgtcaacgta
    12121 cagggcgacg agccgctgat tgcacctgaa ctcatcgacc gcaccgccga agtactcgtc
    12181 gaaaacaacg tccaaatggc gaccgccgcc cacgaattgc acgatttcga cgaattgatg
    12241 aatcccaatg ccgtcaaagt tgtcctcgac aaaaaccgca acgccatcta cttcagccgc
    12301 gccccgattc cctatccgcg cgatgcgatg cgtgcaggaa aacgcgaaat gccgtttgaa
    12361 accgccgtcc tgcgccatat cggcatctac gcctaccgcg tcggcttcct gcaacgctac
    12421 accgaaatga gcgtttcgcc gctggaaacc attgaatcgc tggagcaact gcgcgtcctg
    12481 tggcacggct acccgattgc cgtcgaaacc gccaaagaag ctcctgccgc cggcgtagat
    12541 acgcaggagg atttggacag gattcgcgct gtatttcaga ctatataaaa tagattcaaa
    12601 gggaaaagat atgcagcaac atattgaaaa atggcaacac ttgagccggg aagaacagaa
    12661 aatccttgcc gaagtatggg gtctcgtgca aaacgacgat caggaggttc actatgaaat
    12721 gctcaaattg aacgcacccg acgaagccag tggcgaattt tggttcagaa tggcagaaac
    12781 actcagcacc ctgccgccca accgttccct cgaccttaga atgaacggcg gcaggctggc
    12841 gaccgccgta tccatccttt ccgtcatgat tgaagacaat cccgacatac cgcagctttg
    12901 ggcgcaaaaa attaccgcgc tcaattatag tggattaaat t
//
LOCUS       DAXHRP010000043        12651 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.043, whole genome shotgun sequence.
ACCESSION   DAXHRP010000043 DAXHRP010000000
VERSION     DAXHRP010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.043"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            44..457
                     /locus_tag="ACFM72_000910"
     CDS             44..457
                     /locus_tag="ACFM72_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HFC6257498.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVHRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLAFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            503..1132
                     /gene="nth"
                     /locus_tag="ACFM72_000911"
     CDS             503..1132
                     /gene="nth"
                     /locus_tag="ACFM72_000911"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HFC6257499.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAILDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1270..2769
                     /locus_tag="ACFM72_000912"
     CDS             1270..2769
                     /locus_tag="ACFM72_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HFC6257500.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLIMRRGNTLFIALNLQ"
     gene            2969..4489
                     /locus_tag="ACFM72_000913"
     CDS             2969..4489
                     /locus_tag="ACFM72_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HFC6257501.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAIITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDGSRGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGILAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVDPSLIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4546..5631
                     /gene="nagZ"
                     /locus_tag="ACFM72_000914"
     CDS             4546..5631
                     /gene="nagZ"
                     /locus_tag="ACFM72_000914"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HFC6257502.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAVGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGLKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5859..5935
                     /locus_tag="ACFM72_000915"
     tRNA            5859..5935
                     /locus_tag="ACFM72_000915"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5893..5895,aa:Pro,seq:cgg)
     gene            complement(6271..6909)
                     /locus_tag="ACFM72_000916"
     CDS             complement(6271..6909)
                     /locus_tag="ACFM72_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HFC6257503.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVVAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(6906..7277)
                     /locus_tag="ACFM72_000917"
     CDS             complement(6906..7277)
                     /locus_tag="ACFM72_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HFC6257504.1"
                     /translation="MKLLFILLVLFVAVEHFYIAWLEMTQIPSEKAAETFKLPYEFME
                     QNRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGAMVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(7546..7968)
                     /gene="queD"
                     /locus_tag="ACFM72_000918"
     CDS             complement(7546..7968)
                     /gene="queD"
                     /locus_tag="ACFM72_000918"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HFC6257505.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDPVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(7975..8493)
                     /locus_tag="ACFM72_000919"
     CDS             complement(7975..8493)
                     /locus_tag="ACFM72_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HFC6257506.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQIVEWADGYDIAVSETPKTKMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            complement(8521..9180)
                     /gene="queC"
                     /locus_tag="ACFM72_000920"
     CDS             complement(8521..9180)
                     /gene="queC"
                     /locus_tag="ACFM72_000920"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HFC6257507.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERASWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            complement(9384..9570)
                     /locus_tag="ACFM72_000921"
                     /pseudo
     CDS             complement(9384..9570)
                     /locus_tag="ACFM72_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            9725..10951
                     /locus_tag="ACFM72_000922"
     CDS             9725..10951
                     /locus_tag="ACFM72_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HFC6257508.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(10972..11253)
                     /locus_tag="ACFM72_000923"
     CDS             complement(10972..11253)
                     /locus_tag="ACFM72_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC6257509.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDEATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(11332..11466)
                     /locus_tag="ACFM72_000924"
                     /pseudo
     CDS             complement(11332..11466)
                     /locus_tag="ACFM72_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(11465..11923)
                     /locus_tag="ACFM72_000925"
     CDS             complement(11465..11923)
                     /locus_tag="ACFM72_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257510.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     SYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
BASE COUNT         2953 a         3393 c         3180 g         3125 t
ORIGIN      
        1 gtacaatccg tcgccgattg ttacctgttt gagactgttt gcaatgatac cctcctacac
       61 ctacgccgcc ctcgcctttt ccgccttcac ttccgccacc ctcctgcccg gcacatccga
      121 agccgccttt gccctgttcg tccaccgctt tcccgaacac gcatacggcg cgttgctgtg
      181 cgccggcctt gccaacggat tgggcagtat ggtttcctat tggatggggc gtttgctgcc
      241 ctcccgaaaa atgccgtctg aaaaaacact gaatctgatg cggcgtttcg gtatttggct
      301 gcttgcgttt gcctggctgc ccgtcgtcgg cgacgcactg ccgcttgccg ccggctggct
      361 gcggttgaat ccgtggacaa gcgggctgat gctggttatc ggcaaaacgg cgcgttacgc
      421 cttcattctg tggggaatgc aatattacgc cgcctaaacc atacgttata atgccgaaca
      481 cacaaaccca ccgtataaaa aaatgaacag acacatccgc caagaaatct tcgaacgctt
      541 ccgcgccgcc aacccccatc cgaccacaga actcaacttc aactcccctt tcgagctttt
      601 aatcgccgtt ttactgtcgg cacaggcaac cgacgtcggc gtaaacaaag cgacggcgaa
      661 gctgtttccg gttgccgata cgccgcaggc gatactggat ttgggtttgg acggcgtgat
      721 ggaatatacg aaaaccatcg ggttgtataa aaccaagtcc aagcacatca tgcagacctg
      781 ccgcatcctg ctggaaaaat acaatggcga agtgccggaa gaccgcgagg ctttggaatc
      841 gttgccgggc gtggggcgca aaacggcaaa cgtggtattg aacacagcgt tcggacaccc
      901 cgttatggcg gtcgatacgc atattttccg cgtgtccaac cgaaccaaaa tcgcccccgg
      961 gaaagatgtg cgcgaagtcg aagacaaact gatgcgcttc attcctaaag agttcctgat
     1021 ggacgcgcac cactggctga ttttgcacgg acgctacacc tgcaaggcac tcaaaccgca
     1081 atgccaaacc tgcatcatca acgatttgtg cgaatatccc gccaaagcct gaccgccgcc
     1141 gcccttcaaa atgaaacgct tgaaaattcg gacggacgtt gtagaatttc aacctatgcc
     1201 gtctgaagcc gacaaaatgc gcttcagacg gcattaaagc cggtaccggc atccgacaaa
     1261 ggacaaaacg tgttcaaaaa ataccaatac ctcgctttgg cagcactgtg tgccgcctcg
     1321 ctggcaggct gcgacaaagc cggcagcttt ttcggtgcgg acaaaaaaga agcatctttc
     1381 gtagaacgca tcgaacacac caaagacgac ggcagcgtca gtatgctgct gcccgacttt
     1441 gtccaactgg ttcaaagcga aggcccggca gtcgtcaata ttcaggcagc ccccgccccg
     1501 cgcacccaaa acggcagcgg caatgccgaa accgattccg acccgcttgc cgacagcgac
     1561 ccgttctacg aatttttcaa acgcctcgtc ccgaacatgc ccgaaatccc ccaagaagaa
     1621 gcagatgacg gcggattgaa cttcggttcg ggcttcatca tcagcaaaga cggctatatt
     1681 ctgaccaata cgcacgtcgt taccggcatg ggcagtatca aagtcctgct caacgacaag
     1741 cgcgaatata ccgccaaact catcggttcg gatgtccaat ccgatgtcgc ccttctgaaa
     1801 atcgacgcaa cggaagagct gcccgtcgtc aaaatcggca atcccaaaga tttgaaaccg
     1861 ggcgaatggg tcgccgccat cggcgcgccc ttcggcttcg acaacagcgt gaccgccggc
     1921 atcgtgtccg ccaaaggcag aagcctgccc aacgaaagct acacaccctt catccaaacc
     1981 gacgttgcca tcaatccggg caactccggc ggcccgctgt tcaacttaaa aggacaggtc
     2041 gtcggcatca actcgcaaat atacagccgc agcggcggat tcatgggcat ttccttcgcc
     2101 atcccgattg acgttgccat gaatgtcgcc gaacagctga aaaacaccgg caaagtccaa
     2161 cgcggacaac tgggcgtgat tattcaagaa gtatcctacg gtttggcaca atcgttcggt
     2221 ttggacaaag ccggcggcgc actgattgcc aaaatcctgc ccggcagccc cgcagaacgt
     2281 gccggcctgc aggcgggcga catcgtcctc agcctcgacg gcggagaaat acgttcttcc
     2341 ggcgaccttc ccgttatggt cggcgccatt acgccgggaa aagaagtcag cctcggcgta
     2401 tggcgcaaag gcgaagaaat cacaatcaaa gtcaagctgg gcaacgccgc cgagcatatc
     2461 ggcgcatcat ccaaaacaga tgaagccccc tacaccgaac agcaatccgg tacgttctcg
     2521 gtcgaatccg caggcattac ccttcagaca cataccgaca gcagcggcgg acacctcgtc
     2581 gtcgtacggg tttccgacgc ggcagaacgc gcaggcttga ggcgcggcga cgaaattctt
     2641 gccgtcgggc aagtccccgt caatgacgaa gccggtttcc gcaaagctat ggacaaggca
     2701 ggcaaaaacg tccccctgct gatcatgcgc cgtggcaaca cgctgtttat cgcattaaac
     2761 ctgcaataac acacataatt taaccaaaat attttttaaa tgataaaatg cccgtcaata
     2821 ccgattaacg ggcattttaa aaaatcagtt aattgatttc aaataagtat tttccggaac
     2881 agaaaatact ttcgcccatt ttgccaacaa aatccgaacc gttgcggaca gaaaccgccc
     2941 catccggacg cttaacaccc ccataaccat gcagctgatc gactattcac attcattttt
     3001 ctcggttgtg ccaccctttt tggcactggc acttgccatc attacccgcc gcgtactgct
     3061 gtctttaggc atcggtattc tggtcggcgt tgcctttttg gtcggcggca accccgtcga
     3121 cggtctgaca cacctgaaag acatggtcgt cggcttggct tggtcagacg gcgattggtc
     3181 gctgggcaaa ccaaaaatcc tggttttcct gatacttttg ggtattttta cttccctgct
     3241 gacctactcc ggcagcaatc aggcgtttgc cgactgggca aaacggcaca ttaaaaaccg
     3301 gcgcggcgcg aaaatgctga ccgcctgcct cgtgttcgta acctttatcg acgactattt
     3361 ccacagcctc gccgtcggtg cgattgcccg ccccgttacc gacaagttta aagtttcccg
     3421 cgccaaactc gcctacatcc tcgactccac tgccgcgcct atgtgcgtgc tgatgcctgt
     3481 ttcaagttgg ggcgcgtcga ttatcgccac gcttgccgga ttgctcgtta cctacaaaat
     3541 caccgaatac acgccgatgg ggacgtttgt cgccatgagc ctgatgaact attacgcgct
     3601 gtttgccctg attatggtgt tcgtcgtcgc atggttttcc ttcgacatcg gctcgatggc
     3661 gcgtttcgaa caagccgcgt tgaacgaagc ccacgatgaa actgccgttt cagacggcag
     3721 ccggggcagg gtttacgcat tgattattcc cgttttggcc ttaatcgcct caacggtttc
     3781 cgccatgatc tacaccggcg cgcaggcaag cgaaaccttc agcattttgg gggcatttga
     3841 aaacacggac gtaaacactt cgctggtatt cggcggcact tgcggcatcc ttgccgtcgt
     3901 tctctgcacg ctcggcacga ttaaaaccgc cgactatccc aaagccgttt ggcagggtgc
     3961 gaaatctatg ttcggcgcaa tcgccatttt aatcctcgct tggctcatca gtacggttgt
     4021 cggcgaaatg cacaccggcg attacctctc cacactggtt gcgggcaaca tccatcccgg
     4081 cttcctgccc gtcatcctct tcctgctcgc cagcgtgatg gcgtttgcca caggcacaag
     4141 ctgggggacg ttcggcatta tgctgccgat tgccgccgcc atggcggtca aagtcgatcc
     4201 ctcactgatt atcccgtgta tgtccgcagt aatggcgggg gcggtatgcg gcgaccactg
     4261 ttcgcccatc tccgacacga ccatcctgtc gtccacaggc gcgcgctgca accacatcga
     4321 ccacgttacc tcgcaactgc cttacgcctt aaccgttgcc gccgccgccg catcgggcta
     4381 cctcgcattg ggtctgacaa aatccgcgct gttgggcttt ggcacgacag gcattgtatt
     4441 ggcggtgctg atttttctgt tgaaagataa aaaacgcgcc aacgcctgac ccctttccct
     4501 gttcagacgg catatgccgt ctgaagcttt ttggagcaaa ccgcaatgac cgtcccccat
     4561 attccgcgcg gccccgtcat ggcagacatt gccgccttcc gcctgaccga agaggaaaag
     4621 caacgcctgc tcgatcccgc cgtaggcggc atcatcctct tccgccgcaa cttccaaaac
     4681 atcgaacaac tcaaaacact caccgccgaa atcaaagccc tgcgcacacc cgaactcatt
     4741 atcgccgtcg atcacgaagg cggcagggtg caacgtttca tcgaaggctt cacccgcctg
     4801 cccgcaatga gtacgctcgg cgagatttgg gacaaagacg gcgcgtccgc cgccgaaacc
     4861 gccgccggac aagtcggccg ggttttggca accgagcttt ccgcctgcgg catcgatttg
     4921 tccttcacgc ccgtcttaga tttggactgg ggaaactgcc ccgtcatcgg caaccgcagt
     4981 ttccaccaca atcccgaagc ggtcgcccac ctcgccctcg cccttcaaaa aggtttggca
     5041 aaaggcggta tgaaatcctg cggcaaacat tttcccggac acggatttgt cgaaggagac
     5101 agccatctgg tcttgccgga agacaggcgc agcctgtccg aactcgaagc cgccgacctc
     5161 gcccccttcc acattatgag ccgcgaaggt atggcggcgg ttatgcccgc ccacgtcgtt
     5221 tatccacaag tggacacaaa gcccgcaggg ttttccgaaa tctggctcaa acaaattttg
     5281 cgccgcgata tcggattcaa aggcgtgatt ttctcggacg atttgactat ggagggcgcg
     5341 tgcggtgtcg gcggcctcaa agaacgcgcc cgcatttcct ttgaggcagg ttgcgacatc
     5401 gtcctcgtct gcaaccgtcc cgaccttgtg gacgaactgc gcgaagattt ccgcattcct
     5461 gacaatcccg ctttggcgca acgttggcaa tatatggcca acacgctcgg cagtgccgcc
     5521 gcgcaagccg ttatgcagac ggcggatttc caagaggcgc aagcctttgt tgccggcctt
     5581 gcctcgccgc aggatacagc gggcggcgta aaagtcggcg aagcctttta aaccggctgc
     5641 gtttcaacaa tctgccgatt tcatcaaccg tttgtcaggg aaaggcaatg attttttcgg
     5701 tcaggtagaa agttatctta ttgaattact taaagataat gatgattatc aacactgtat
     5761 tcaaacacac tcctttaaat ccgcccgaca cgcggcaaaa aggcaaaacg gtataggcac
     5821 gccgtatttt ttgcgctata atcacgcctt acttaattcg gaatgtagcg cagcccggta
     5881 gcgcacttcg ttcgggacga aggggtcgga ggttcgaatc ctctcattcc gaccatattc
     5941 aaaccgcctc ggcatggatt gctggggcgg tttttccctt ttggcgtcaa cagaaaaatg
     6001 ccgtctgaaa cagcattctg tttcagacgg catttcgttt tccctaaccc ttctatttgc
     6061 gtgcactgac aaagggtatc ggcaaggttc aaaagaccat cggaatttag gaagccgggc
     6121 ttgtacccaa cggcagcatc ttattcagta aggttccgcc tcaatcaggc agcggaaatg
     6181 tgggcagttt cacgcagaag cggcacactt tccccgtatg tcaaacatcg gtaaaaccgt
     6241 acgccgtccc tttgagttac actgcttaaa ctactctatt cccgcccatt tgtgcgtctg
     6301 cacgctcaac tgccaatgca cggatgcgtc ggggcgactg tttaaaatac cgatttggcg
     6361 gatggtgtcg tagatgttca tcgcaccgtc ttgctcacag ggcgaaaggt agtaatgatg
     6421 cgcgcggatt ttgcgttcca tattttcaca gaacgcaacg acatcgccgt cggcaacaat
     6481 ccgcacttcg tcggctgttt cgatacagct tttttcgtat ttggcggcat agcaggcttt
     6541 ggggctggtg gcgacatagt cgatttgcgg cggcgcggga ttgagtccgt tggtttcgag
     6601 acagaggaaa tagccttccg ccttgagcgt gtccagcagc atatcgagat gcggctgtat
     6661 ggtcggttcg ccgccggtga tgatgatgtt gcgggcggca taggttttca gacagcctaa
     6721 gatgtcggac aggctcatca tgccgaatgt caaataatcg gtatcacacc agccgcaggc
     6781 gaggttgcat ttgcccaagc ggacgaaaac ggcgggcatg cccgtgttcc agccttcgcc
     6841 ttgcaggctt tcaaagattt cgacgatgcg gtattgggga ttttcggggg caacattgat
     6901 ttttttcata ccgccaacac cgccgccgct gccaaaaatg cgggcaaacc ttgtttgacg
     6961 agtatgcctt tgttgccgga agagaacgcg ccccacgcgg cggcaatcag gacgaagccg
     7021 agaaacagta ccattgcgcc gtacaccgcg ttatccggcg cggcaaaccg cgaccacacc
     7081 agcccgatgc cgagaaagcc gttatacagc ccttggttgc cgaacagggt ctgcacgcga
     7141 ttttgttcca taaattcata aggcagcttg aacgtttccg ccgctttttc gctgggaatc
     7201 tgtgtcattt caagccaggc gatgtagaaa tgttcgacgg cgacgaagag gactaggagg
     7261 atgaagagga gtttcatggg tattcctttt aatgggtgta tttgatatgg aaggtcgtct
     7321 gaaaaaacgg ggaatccgta caggagaaaa aaccgtttta cggtaaattc aaataaggac
     7381 gctctaaacc gtcctttccg cgcaggcggg aatccagaga gttggaattg ctgcaatttt
     7441 taaatattcc tgataaatca aggtctggat tcccgcctgc gcgggaatga cgcggttggg
     7501 catgtcttat tggaatttac tatatcgata cgttcaagat attccctact ccccttcata
     7561 ctccgcacac gatgtcggcg tttcccacaa tttgacgcgg cacacgttca gccccgcgtt
     7621 tttcagacgg tcgtacattt cgaccgccat attttcggca gtggtgcggc agggcaggcg
     7681 cagggttttc atgttccagc cttccaagag tgcggcgatt tgagattcgc gcccgttgcc
     7741 gccgtggtag atgaaggcgt ggtcgaaggg gtcggtaatg tgttgtttga caatggcttt
     7801 caagtcggta aagtccatca ccataccgtc tttcggcccg cctctgacgg ggtcgtctga
     7861 aacggtgatt tcgagtttgt aggtatgccc gtgcaggttt tggcatttgc cgtcatgccc
     7921 gtcgagcata tgcgaggagt cgaaggtgaa gattttggtg attttcatgg gttctcaaat
     7981 gggcaaatag ccttgaaagc cgatttcggc gggtttgccg tgcggattcg gggtcaggcg
     8041 gatatggaaa ttgccgatgc ggtcgagcgc aagcaggttg tccacgtctt ttaagttgtc
     8101 tttatgttgc tgaacatagc tgtcggtcaa cagggtttgc agggcttttt gtttggcttc
     8161 ggcaggcgtg gcggcggcga acagcccaaa agcgtgcgct tcggcgagct gccctgcgcg
     8221 ataaccgccg acattggcaa aatacaggcg cggggcgtgt tcagacggca ttttcgtttt
     8281 gggcgtttcg gatacggcga tgtcgtaacc gtccgcccat tcgacaatct gccagccgtc
     8341 gatgtggatt ttgtccgcat cgccgaacca cgcggctttg agtgcgggga cggcttcacg
     8401 gtagtcgtcg cacacggcaa attggatgtc gtgcacttcg atattcgacc tgccggcatt
     8461 gccgccgagg taaaacatat ggagcttggg catatcgtat tccttatggt ttgcgcgtgt
     8521 tcagacggcc tttttacttt ccagatattc cgccagcccg cgttcgcgca agatacagct
     8581 cgggcattcg cggcagccgc cgacgatgcc gttatagcag gtgtgggttt gctcgcggat
     8641 atagtccagc gcgcccattt cgtccgccaa cgcccaagtt tgcgccttgg tcagatacat
     8701 cagcggcgtg tggatttgga aatcatagtc catcgccaga ttaagggtaa cgttcatgga
     8761 tttgacgaac acgtcgcggc agtcaggata gccggagaag tcggtttcgc acacgcccgc
     8821 gatgatgtgc cgtatcccct gccctttggc gtaaatcgcg gcatagagca ggaaaagcgc
     8881 gttgcggccg tctacaaagg tattcggaac gccgttttcg gcagtttcga tggcggcggt
     8941 gtcgtccatc agggcattgt gcgtaatctg ccgcatcagg ctcaagtcga gtacggtttg
     9001 tttgacgccc aaatcctgcg caatccagct ggcacgttcc agctcgacgg catggcgttg
     9061 cccgtattgg aaagtaatgg cttggacgtt ttcgcgcccg tagatttgga ttgcctgaat
     9121 caggcaggtg gtcgaatcct gaccgcccga aaagatgacc aaggcttttt ggtttgacat
     9181 atcgaatcct agttttggta acgcgggagg tttgcgaacc gcgaagttgg acagtaaaga
     9241 cgcggattat acaggcaaac gcgttcagac ggcatctgaa cgccatgccg tctgaacacg
     9301 cggcttatgc cgacttgacg gcgagttccg ccaagcgttt gctttgtgcg aaggcgatat
     9361 tgttttcttc ggcggtcagg acgggagccg ctgtcgggaa tatctttttt gacggcttcg
     9421 cagacggcgg agactttggg gacggtgcgc aatacggctt cgcaaccttc aacgctgtcg
     9481 atgccgcgag cgattcggag tgcgggattg cgggtgctgc cgttttggaa atagtagagg
     9541 acgaggattt tgagggggat ttgggttcat gggcggattc cgttaaaatg gttcggtctt
     9601 cagacggcat aacagttgtt ccgatgccgt ctgaaacagc cgcagttcag gcatttgttc
     9661 ctgacggcaa aattggctat aacatcgggc atcaatgccc aacttactga ccgggcaaga
     9721 aattatgacc tttttacaac gtttgcaagg tttggcagac aataaaatct gtgcgtttgc
     9781 atggttcgtc gtccgccgct ttgatgaaga acgcgtaccg caggcggcgg caagcatgac
     9841 gtttacgacg ctgctggcac tcgtccccgt gctgaccgtg atggtggcgg tcgcttcgat
     9901 tttccccgtg ttcgaccgct ggtcggattc gttcgtctcc ttcgtcaacc aaaccattgt
     9961 gccgcagggc gcggacatgg tgttcgacta tatcaatgcg ttccgcgagc aggcgaaccg
    10021 gctgacggca atcggcagcg tgatgctggt cgttacctcg ctgatgctga ttcggacgat
    10081 agacaatacg ttcaaccgca tctggcgggt caattcccag cgtccgtgga tgatgcagtt
    10141 tctcgtctat tgggctttac tgacgttcgg gccgctgtct ttgggcgtgg gcatttcctt
    10201 tatggtcggc tcggtacagg atgccgcgct tgcctcaggt gcgccgcagt ggtcgggcgc
    10261 gttgcgaacg gcggcgacgc tgaccttcat gacgcttttg ctgtgggggc tgtaccgctt
    10321 cgtgccaaac cgcttcgttc ccgcgcggca ggcgtttgtc ggggctttgg caacagcgtt
    10381 ctgtctggaa accgcgcgtt ccctctttac ttggtatatg ggcaatttcg acggctaccg
    10441 ctcgatttac ggcgcgtttg ccgccgtgcc gtttttcctg ttgtggctga acctgttgtg
    10501 gacgctggtc ttgggcggcg cggtgctgac ttcttcactc tcctactggc agggagaagc
    10561 gttccgcagg ggcttcgact cgcgcggacg gtttgacgac gtgttgaaaa tcctgctgct
    10621 tctggatgcg gcgcaaaaag aaggcaaagc cttgcctgtt caggagttca gacggcatat
    10681 caatatgggc tacgacgagt tgggcgagct tttggaaaag ctggcgcggc acggctacat
    10741 ctattccggc agacagggtt gggtgttgaa aacgggggcg gattcgattg agttgaacga
    10801 actcttcaag ctcttcgttt accgtccgtt gcctgtggaa agggatcatg tgaaccaagc
    10861 tgtcgatgcg gtaatgatgc cgtgtttgca gactttgaac atgacgctgg cagagtttga
    10921 cgctcaggcg aaaaaacagc agcaatcttg agtatttttg aaactgtatt tttatcctaa
    10981 agacattttc ctatctgctg attccaccgt ttcctttctg tgtgccgcca taatttttat
    11041 gatagacaag ccattcaagt ttgcattgac tgctttttca ttggcaatat ccaaatggct
    11101 ggtcgcttca tctaaaaata ggattttcgg ttcgcaatat aaggcccgcg ccaatacgat
    11161 gcgttgtttt tgtccgcctg acagtgcgct gcccatatcg ccgattaagg tttcatagcc
    11221 cataggcatg gcggagattt cttcgtgaat catagcaagg caggcgcaat gttcgatttt
    11281 tcctctatcc ggttccgtat cgaaaaaaca aggggctgta ctagattagc cctaaatccc
    11341 acaccaatcc cgcaggattt taagctgttg agacggtgtg ccgaagttaa atcgaaattc
    11401 gcattctttc aagaacagcg ggaaagattt gcaatcgatt ccgttgtatt ttcgcaagac
    11461 acgtttagtc tagagtctgt atattacatt tatttttagg gtctgctagc caatttcttg
    11521 ttcccttcat tattttatct tctgaaagaa aattattttt ttccatgcta ttaatattaa
    11581 tgatatgatt tttatttaaa ataatttttc catatgaaat ttccggtttg taatagcaag
    11641 agtctgaagc aaatccttgc ccgtcaatat aagaaaaata aatgttatca tcctccttat
    11701 aatattctaa aaccaatccg gatattattt tatcaaaatt cccttcattt ccatctttca
    11761 tgactaaaat ataattagca ggccaacctt tatcgtaaac atattcaaac tgatagttcc
    11821 cgaaactctc gatatccgaa ctaaaaaaga agaaaagcaa attaatagcc aatacaaaaa
    11881 caaataagaa caaaaatagc aaaattttca acttagttaa caatatttac ctctccttta
    11941 aattcaatcc tgaaaggtac cccttaccct gggctaccaa ttatagtttc catatttcta
    12001 aatattgttt ttacattact tttttctccc cccaaaggaa tgcattttaa aatcatgctt
    12061 ttcaggtgct aatcgatact taccattaac atctttaatc acagatatat ttccatgtat
    12121 agcccaacgt gaaaaatctg agtattatat acagttatac cttactgaaa caaagctagc
    12181 tgtacatatc tgtaccatat ttttactaaa aacaaaaaat atttataatt attaaggata
    12241 agataaaaac cccaacgcca gattaattct caataatttc aaataaaaaa tatttgagat
    12301 tttttctttt ccaaataata tattgaaata tttaaagtta aggtagcttg atttaattag
    12361 aaaatcaaaa aaaccattaa ttaatttttc ttctttaaat attttatatg atattataaa
    12421 attaaataac attgcgaaaa catatgaaat catcaaaata ccaaatatat agtgggaatg
    12481 cattattatt tagctccttc ttttggctct gacaaattga cagtccattg atatccaatg
    12541 cttgcatttg caattgctga cgcacctgcc cctgttttcc ctgttagtat caatgattct
    12601 tttcttgcaa gatgtgcacc tgcacaacca cctaatacta aaccaccacc t
//
LOCUS       DAXHRP010000044        12148 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.044, whole genome shotgun sequence.
ACCESSION   DAXHRP010000044 DAXHRP010000000
VERSION     DAXHRP010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12148
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.044"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            243..980
                     /locus_tag="ACFM72_000926"
     CDS             243..980
                     /locus_tag="ACFM72_000926"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HFC6257511.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVAG
                     NVAFPLEIAGWPSEKIKERVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            982..1668
                     /locus_tag="ACFM72_000927"
     CDS             982..1668
                     /locus_tag="ACFM72_000927"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HFC6257512.1"
                     /translation="MADLTFQQAVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPIA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPLAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NTLARKLDKR"
     gene            1827..2690
                     /locus_tag="ACFM72_000928"
     CDS             1827..2690
                     /locus_tag="ACFM72_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC6257513.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEQIQAELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2752..3321)
                     /locus_tag="ACFM72_000929"
     CDS             complement(2752..3321)
                     /locus_tag="ACFM72_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HFC6257514.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETDYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3480..4340
                     /locus_tag="ACFM72_000930"
     CDS             3480..4340
                     /locus_tag="ACFM72_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC6257515.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     VALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4475..4813
                     /locus_tag="ACFM72_000931"
     CDS             4475..4813
                     /locus_tag="ACFM72_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257516.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNESIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5181..5534
                     /locus_tag="ACFM72_000932"
     CDS             5181..5534
                     /locus_tag="ACFM72_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HFC6257517.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5524..6390
                     /gene="atpB"
                     /locus_tag="ACFM72_000933"
     CDS             5524..6390
                     /gene="atpB"
                     /locus_tag="ACFM72_000933"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HFC6257518.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6447..6683
                     /gene="atpE"
                     /locus_tag="ACFM72_000934"
     CDS             6447..6683
                     /gene="atpE"
                     /locus_tag="ACFM72_000934"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HFC6257519.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6754..7224
                     /locus_tag="ACFM72_000935"
     CDS             6754..7224
                     /locus_tag="ACFM72_000935"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HFC6257520.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7229..7762
                     /locus_tag="ACFM72_000936"
     CDS             7229..7762
                     /locus_tag="ACFM72_000936"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HFC6257521.1"
                     /translation="MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7773..9320
                     /gene="atpA"
                     /locus_tag="ACFM72_000937"
     CDS             7773..9320
                     /gene="atpA"
                     /locus_tag="ACFM72_000937"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HFC6257522.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9345..10220
                     /gene="atpG"
                     /locus_tag="ACFM72_000938"
     CDS             9345..10220
                     /gene="atpG"
                     /locus_tag="ACFM72_000938"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HFC6257523.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMCQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10258..11655
                     /gene="atpD"
                     /locus_tag="ACFM72_000939"
     CDS             10258..11655
                     /gene="atpD"
                     /locus_tag="ACFM72_000939"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HFC6257524.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11666..12088
                     /locus_tag="ACFM72_000940"
     CDS             11666..12088
                     /locus_tag="ACFM72_000940"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HFC6257525.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         2975 a         3123 c         3135 g         2915 t
ORIGIN      
        1 tcaattattt gccgttttgg tgcgaaccgc tgcctttgcc cgtttcagac ggcattgtcc
       61 gaaatggttg cccgcttcct gccttattga caaaaaaacg ctttcccgat aatatcctac
      121 gaaaattaac ctgccgattt gacacagctt gcgggcataa cagctaaagc gttccgacaa
      181 tttcagcttt atcttccgcg cccgttgtgt cctgcatcgg gctttgtttt atgggaaaga
      241 caatgattat tttggacaag gtttccaagc attaccaaac gcgcgacaag acccgttttg
      301 ccgccgtcga gccgaccagc ctcgaaatcc gcgacggcga aatcttcggg ctgatgggct
      361 attccggcgc gggcaaatcc actctgctgc gcctgattaa cctgttggaa cgtcccgaca
      421 gcggcaaggt caacgtttgc ggacaagagc tgaccgcgct cgatgccgcc gcattgcgtc
      481 aggcgcggca gaatatcggc atggtgtttc agcagttcaa ccttttgagc aaccgcaccg
      541 ttgccggcaa cgtcgccttc ccattggaaa tcgccggatg gccgtctgaa aaaatcaaag
      601 aacgcgttgc cgaatgcctc gaaatcgtcg gcttgaccga acgcgccggc cactatcccg
      661 cccagctttc aggcgggcag aaacagcgtg tcggcatcgc ccgcgcactc gcgcccaaac
      721 cccaagtcat cctcgccgac gaacccactt ccgccctcga ccccgccacc acgcgcagcg
      781 tcttggaatg tttggaagac atcaacaaac gattcaacgt aaccatcgtc atcgtaaccc
      841 acgaaatgag cgttatcaga cgactgtgcg accgcgccgc cctgttggat aagggaaaag
      901 tcgtcgaaat cgtcgaagta cgcggcaacc aaatccacgc ccgatccgac atcgggcgcg
      961 aactcatcag agaggactga aatggcagac ctgaccttcc aacaagccgt ttccaacatc
     1021 atcggtatga aaggcgaaat cgtccgcgca ttgggcgaaa ccttcgtgat ggtcggcttg
     1081 tccaccacat tcgccgtcgt tttcggcacg ttgctgggcg tgttgctctt cgtaacttcc
     1141 agccgccaac tgcattacaa caagccggtg aacttcctgc tcgacaacct cgtcaacctc
     1201 atgcgcgcct tccccttcgt cattttgatg attgcgatga tacccgccac acgcgccatc
     1261 gtcggcagca ccatcggccc gattgccgcc tcgctggtgt tgagcgtgtc gggattgttt
     1321 tattttgccc gactggtgga acaaaacctg cgcgaagtcc ccaaaggcgt gattgaagcc
     1381 gccgccgcga tgggtgcgcc gccgcttgcc atcgtccgca aagtcctctt aaacgaagcg
     1441 cgcgcgggta tggtttccag cattaccgtg cttgccatcg ggcttttgtc atacagcgcg
     1501 gcggcgggca tgataggcgg cggcggcttg ggcgacctcg ccatccgcta cggctactac
     1561 cgctaccaaa ccgaagtcat cgtcttcatc gtcgccctcc tcgtgctgct ggtcatcctg
     1621 attcaaagca ccggcaacac gttggcgcgg aaattggata aacgttaaac ccgaatgccg
     1681 tctgaacgcc aaaaccccca ccgctatccg aaaaatgcta taaaatcccc ctgttcgcgg
     1741 caaatgccgt ctgaacgccg aatccggacg gcaggactcc ctgcccgtca tttttgtttg
     1801 aaactgccac aacatcagga gaaaatatga aaaccttctt caaaaccctt tccgccgccg
     1861 cactcgcgct catcctcgcc gcctgcggcg gtcaaaaaga cagcgcgccc gccgcatccg
     1921 cttctgccgc cgccgacaac ggcgcggaga aaaaagaaat cgtcttcggc acgaccgtcg
     1981 gcgacttcgg cgatatggtc aaagaacaaa tccaagccga gctggagaaa aaaggctaca
     2041 ccgtcaaact ggtcgagttt accgactatg tacgcccgaa tctggcattg gctgagggcg
     2101 agttggacat caacgtcttc caacacaaac cctatcttga cgacttcaaa aaagaacaca
     2161 atctggacat caccgaagtc ttccaagtgc cgaccgcgcc tttgggactg tacccgggca
     2221 agctgaaatc gctggaagaa gtcaaagacg gcagcaccgt atccgcgccc aacgacccgt
     2281 ccaacttcgc ccgcgtcttg gtgatgctcg acgaactggg ttggatcaaa ctcaaagacg
     2341 gcatcaatcc gttgaccgca tccaaagcgg acatcgccga gaacctgaaa aacatcaaaa
     2401 tcgtcgagct tgaagccgcg caactgccgc gtagccgcgc cgacgtggat tttgccgtcg
     2461 tcaacggcaa ctacgccata agcagcggca tgaagctgac cgaagccctg ttccaagaac
     2521 cgagctttgc ctatgtcaac tggtctgccg tcaaaaccgc cgacaaagac agccaatggc
     2581 ttaaagacgt aaccgaggcc tataactccg acgcgttcaa agcctacgcg cacaaacgct
     2641 tcgagggcta caaatcccct gccgcatgga atgaaggcgc agccaaataa ggcagtcgta
     2701 taaaatgatg ccgtctgaac tgtatccgtg ttcagacggc atttttgtcc tttaatccgc
     2761 cattccctgc cattccgccg aatccggcgt atcgattccg aacagcgaca aagcgtgtgc
     2821 aacactgtgc gccactatgt cgtccgccgt ctgcggtttg cggtacatcg caggaacagg
     2881 gggaaacacc acgccgccca tttccgttac ccgcttcata ttgtccaaat gggcaaggtt
     2941 cagcggcgtt tcgcgcacca tcagcaccag ccgccgcctt tccttcaaaa ccacatccgc
     3001 cgcacgcgtc agcagattgt cgccgaagcc gtgcgcgaca gaggcaagcg tccgcatcga
     3061 acagggggcg accagcatcc catccgtttt aaacgtaccg ctggcaatgc acgccccgat
     3121 attgccgatc ggatgcacga agtccgccaa ggcatatacc tcgtctctcg cataatccgt
     3181 ttccgaagcg cgcgccatct ccgcaccttt cgataccaca aggtgcgttt cgatatcttg
     3241 cgcgcgtaaa agttccaaag ccttcacgcc gtattggaaa ccgctcgccc cactgatgcc
     3301 gattatcaaa cgccgtacca tcatccgcct ttcccataaa accgcctgca acggcaaacc
     3361 ggctattata gtaaaaaaac agaaatccga taaacacgga tacaaattgt cggcaatacc
     3421 caatatccga taaaatatcc gatttaacat cctatctgaa ataggcacgg gagggcggta
     3481 tggcaaaagt aaaaggcgga ttggggcgcg gtttggattc gctgctcgcc aacggcgcag
     3541 acaacagcag cggcgaccga ttgaccacgg ttgcggttaa agatatccgg cccggccgct
     3601 atcaggcgcg tgttcaaatc gatgacgaag ccttgcagga gctggcagat tcgattaagg
     3661 cgcaaggcgt gatacagccc gtcatcgtgc gcgaacacgg actgtcccga tacgaactga
     3721 ttgcaggcga acgccgttgg cgcgccgcac agattgccgg cctgaccgaa atccccgccg
     3781 ttatcaaaac catcagcgac gaaaccgcat tggcaatggg tttgatcgaa aacctccagc
     3841 gcgaaaacct caaccccatc gaagaagcac aaggcttgaa acgccttgcc gacgagttcg
     3901 ggctgaccca cgaaaccatc gcccaagccg tcggtaaaag ccgaagcgcg atttccaaca
     3961 gcctgcgcct tttaagcctg cccgaacccg tgcaggaaat gctttaccaa cgccgcctcg
     4021 aaatggggca cgcccgcgca ttgctgaccc tgcccgtcgt cgaacagctc gaattggcgc
     4081 aaaaggccgt caaaaacggc tggtcggtgc gcgaagtcga acgccgcagc caggtcgccc
     4141 ttcaaaacaa acgtcccgag cccaaaaaga ctgccgccgc cgacatcggc cgcctgaatg
     4201 atttgctgac tgaaaaactg ggtgtcaacg ccgaaatcaa aaccgccaat cataaaaaag
     4261 gcagaatcat cctgcatttc gacacgcccg aaaccttcga ccatatcttg aagcagttgg
     4321 gcatagatta ccgaccttaa ttttgcggga tataccgtct gaaatataga gaacagcttt
     4381 ccagatttta agtgggaaat ataattctat tgacattttt ctgcttcacg taagaatcgt
     4441 tttcctgttt tcatttttaa ttttcgagga aattatgaac acacgcatca tcgtttcggc
     4501 tgcgttcgtt gcgttggcat tagcaggttg cggctcaatc aataatgtaa ccgtttccga
     4561 ccagaaactt caggaacgtg ccgcgtttgc cttgggcgtc agcccaaatg ccgtaaaaat
     4621 cagcaaccgc agcaatgaaa gcatacgcat caactttacc gcaactgtgg gtaagcgcgt
     4681 gagccaatgc tatgttacca gtgtaatcag cacaatcggc gttaccactt ccgatgcaat
     4741 ttgtttggga ggcggaacgc acaaaggcaa aagtcaatgc aatgctttgc ttaaagcggc
     4801 aggccgttgc taatccttta ttcggaaaag gtcgtctgaa aatattttca gacgaccttt
     4861 tatttattga gcaaattccc caaactgccg acaatccgac cgataaactg ctacaatttc
     4921 gcgttgattt tttattattt ccacgtaaag caaaccaatc acgtaagaac attaaaaatg
     4981 taaagaaatt gcggacaaac tccttaatat cctgtaatta tatgtaatgt gtgttagaat
     5041 gacacctgtc gccgttattc aggcggcgag cgcggcggat tgggatacgt tgtttcacaa
     5101 agattaactg tcgcttgacg taataaggct tctaaattat attagccgcg ccccaaatcc
     5161 gaggcggaaa cattcccttt atgaagcaga ttatcatcct acaatccgcc gtattgtcca
     5221 tatgcgccgc agttgccttt gctgtatggg gttttgccgg attcctttcg gcggtcggtg
     5281 gcggtttgtc ctacctgctt cccacgtttg ttgcagtttt acttttaaaa cttttcaggg
     5341 gaaacccctt cctgcaaagc aggatgttcg tcttcggaga gattttaaaa gtagtgctgt
     5401 cgctgttgtc catgcttgcc gtatttgcaa tatggcatca atcgctggtg ttcgccccgt
     5461 ttctgatggg gctgctcggt gtcagccatt tggttttttt agtattgttg agagtgaaag
     5521 attatggcag gtgaaaccat taccgctgcc gactacatca agcaccactt gcagagcttg
     5581 accagtttgt cggatgttac tcagggtcag ggactgaaaa acattgctga tttttcgttt
     5641 attaaccttg atgccgtctt ttttgccgtc ctgttgggcg taatcggcag ctttctgttg
     5701 tggcgcggtg caaaaaaagc gacggcaggc gttcccggac gtttccaggc cgcagtggaa
     5761 atcttgtttg agtttgtgga cgatatgtgt aagagcatca ttcacaacga aaagtctaga
     5821 aaagccgtcg cgccgttggg tctgacgctg tttgtctgga tttttctgat gaacgcgatg
     5881 gatatgctgc cggtcgattt gctgccgatg gtatggcagg gcattaccgg caaccatcac
     5941 gccctgctgc gcgtcgtacc gactgccgat ttgaacacca ctttggcact cgctgtcggc
     6001 gtgttgctga tttgtatcta ttacaacatc aaaatcaaag gattgggtgg ctggtttcac
     6061 gagttgttca gcgcgccgtt cggtgcaaaa ctcgcacctg cgaacttcct gttgaatttg
     6121 gtcgagtttc tttctaaaac cgtatcccac ggtatgcggt tgttcggcaa tatgtatgcg
     6181 ggcgaattgg tattcttgct gatagccttg cttggcggtg cttgggcggc ttccggcagc
     6241 gtcgaagtca tggatccgat tctgtttgta ttccacatta ttgccggttt ggcatgggcg
     6301 attttccata ttttggtgat taccctgcag gcgtttattt tcatggcgtt ggcgttcgtc
     6361 tatatcggac aggcacatga tgcgcactga ttttcctaag tagtttgttt ttgtagttta
     6421 acctttgttt ctttaaggag tttaaaatgg gtttgattgc tatcgcatgt ggtttgatcg
     6481 ttgcattggg tgcattgggt gcctctatcg gtatcgcaat ggtcggttct aaatatttgg
     6541 agtcttctgc ccgtcagccc gaactgatcg gtccgctgca aaccaaactg ttcctgattg
     6601 ccggtttgat tgatgccgca ttcttgattg gtgtcgccat tgcactgctg ttcgccttcg
     6661 ttaacccgtt tgcaggtgca taatcaggac ggattcgtcc gttccgtaca ggcgcagcct
     6721 gtttgattaa ccccagtacg aaggttaagt aacgtgaata tcaatgcaac attattcgct
     6781 caaatcatcg tctttttcgg tttggtatgg tttaccatga aattcgtgtg gccgccgatt
     6841 gcaaaagctt tggatgagcg tgccgcaaaa gtcgccgaag gcttggctgc cgccgagcgt
     6901 ggtaaaagcg atttcgagca ggctgaaaaa aaggttgcag aactcttggc agaagggcgt
     6961 aatcaggttt ccgaaatggt tgccaacgcc gaaaaacgtg ccgccaaaat tgtcgaagaa
     7021 gccaaagaac aggcttcttc cgaggcggcg cgcattgcag ctcaggcaaa ggccgatgtg
     7081 gagcaggaat tgttccgcgc acgcgaatcc ctgcgcgagc aggttgccgt gttggctgtc
     7141 aaaggtgccg aatctatttt gcgcagcgaa gtcgatgctt ccaaacacgc aaaactgctc
     7201 gataccctga aacaggagct gtaatcttat ggcagagttc gcaacgattg ccagacctta
     7261 tgcaaaggca ttgttcggtc tggctcagga aaaaagccaa attgagtctt ggttgggcgg
     7321 actggaaaaa cttgcggcgg ttgttcagga agggaaggtg gcttcattga ttgaccgtcc
     7381 tgaaacgaat gcttcagaaa aagcagatat cctcatcgat ttggtcggtt tgaaagacaa
     7441 ggagttgaaa aactttgtta tcgtcttggc cgggcagaaa cgtttgtcga tattgccgga
     7501 agtatatgct caatatcaag acttgacctt atcattcaac catatcaaat ctgccgtcat
     7561 ttacagtgcc tatccgttga ccgacaaaca ggtcggcgag ttggcgcaaa tgctgaataa
     7621 gcgtttcgac agcgagctga aaatctctgt cgaaatcgaa ccggagctga ttggcggcat
     7681 aaaagttgaa gtgggtgatc aggttttgga tttgtctgta caaggcaaat tgagtgcctt
     7741 gtacacgact atgacgaatt aggagagttt tcatgcagct taatcctgct gaaattagcg
     7801 atttgattaa agccaagatc gaaaatctgt ctgtaaatgc cgaagtgcgt acccgtggta
     7861 cggtgatttc ggtaactgac ggtatcgttc gcatccatgg tttgtcagat gcaatgcaag
     7921 gtgagatgct cgaattcccg ggtaacactt tcggcttggc gatgaacctg gagcgcgact
     7981 ccgtcggcgc cgtagtgttg ggcgagtacg aacatattaa agaaggcgac acggttactt
     8041 gtaccggtcg tatcttggaa gtgccggtcg gacgcgaact ggtcggacgc gtcgttgatg
     8101 cattgggtcg tccgattgac ggcaaaggcc cgattaatac aactttgacc gcccctatcg
     8161 aaaaaatcgc accgggcgtg attgcgcgca aatcggttga ccagccgatg caaaccggtc
     8221 tgaaggcgat tgactctatg gttcctgtcg gtcgcggtca gcgtgagttg attattggcg
     8281 accgtcaaac cggtaaaacg gccgtagcat tggatgccat cgtcaaccaa aaaggtacgg
     8341 gcgttatctg tatttatgtc gctatcggtc aaaaagcatc ttctattgcc aacgtggtcc
     8401 gcaaattgga agagcatggc gcgatggaac acacgattgt ggttgctgca actgcatctg
     8461 aagcggcggc attgcaatat atcgcacctt actccggttg tacgatgggt gaattcttcc
     8521 gcgaccgcgg cgaagatgcc ttgattgttt atgacgattt gtccaaacag gctgtggctt
     8581 accgtcaaat ttccctgctt ttgcgccgtc cgcccggccg cgaagcctat cccggcgatg
     8641 tgttctacct gcactcccgt ctgttggaac gtgcagcacg tgtcaatgaa cacgaagtgg
     8701 agaaattgac caacggcgaa gtaaaaggca aaaccggttc tctgactgct ttgccgatta
     8761 tcgaaaccca agcgggcgac gtatctgctt tcgttccgac taacgtcatt tcgattaccg
     8821 acggtcagat tttcttggaa accgacctct tcaacgccgg tatccgtcct gcaatcaatg
     8881 ccggtatttc cgtatcccgc gtaggcggtg ctgcacaaac caaagtgatt aaaaagctgg
     8941 gtggcggtat ccgtttggcg ttggcgcaat atcgtgaatt ggcggcgttc tcgcaatttg
     9001 catccgattt ggatgaagct acgcgcaaac aattggagca tggcgaagtc gtaaccgaac
     9061 tgatgaaaca gaaacagttc agtacgttga atacggctga aatggctttg accctttggg
     9121 caatcaacaa cggttcgtat tctgatgttc cggttgccaa agctctggct tttgaatctg
     9181 aatttttgag ctttgtccgt acccaacatc cggaagtttt ggaagccgtc aatgcttcag
     9241 gtgcaatgtc cgacgagagc gagaaaacgc ttgaagcagc catgaaatcc ttcaaatctt
     9301 cttacgccta tcaggcataa ggcttgaagt gaaaggagtc tgaaatggca gtaggaaaag
     9361 agattctcac caaaatccgc agtgttcaga atacccaaaa gatcactaaa gcgatgcaga
     9421 tggtgtcaac ctctaaaatg cggaagactc aggaacggat gcgtttggcg cgtccgtatg
     9481 ccgaaaaagt gcgtatggtg atgagccatc ttgcgcaaac caataccgat catggtattc
     9541 cgttgctgga atctcatcgg gaaatcagac gtgtcggttt tattttgatt acgtctgata
     9601 agggtttgtg tggcggtttg aacgccaacg tgctgaaaaa gtttttggca caagttcaag
     9661 agtatcggaa tcaaggtatt gaagaggaaa tcgtatgcct tggcagtaaa ggtctgatgg
     9721 cgtgtcagag cattggtctg aatgtggttg ccagtgccgt aaatttgggc gataccccaa
     9781 aaatggaaat gctgctcgga cctttgacag aactcttcca acggtatgag aaacatgaaa
     9841 ttgacagaat ccatctggtg tattcgggtt ttgtcaatac catgtgtcag gaaccgagaa
     9901 tggaagtatt gctgcctatc ggtgagaacg tgattggcga ttcagctccc aaatcaccgt
     9961 tcagctggga ataccgctac gaaccgactg cacttgcagt gttggaatat ctggttcgcc
    10021 gctatttaga gtctgtggtt tatcaggcgt tgagcgacaa tatggcatcc gaacaggcag
    10081 cccgcatggt tgccatgaaa gctgcaacag acaatgcagg caatgccatc aaagagttgc
    10141 gtttggtata taacaaatcg cgtcaagctg cgattaccac ggaattgtca gaaattgtag
    10201 caggtgcggc ggctgtctga tgccgtctga atcctgtacg gaaattagga tacgataatg
    10261 agccaaggca aaatcgtaca aattatcggt gcggttgttg acgtggaatt tccacgcgac
    10321 atgattccgc gcgtttacga cgctttgaaa ttagacgaaa acggtctgac tttggaagtc
    10381 caacagcttt tgggcgacgg cgtagtccgt accattgcga tgggcagctc ggacggtttg
    10441 aaacgcggca tgactgtgag caataccggt gcgcccatta ctgtgccggt aggtaaaggt
    10501 acgttgggac gcattgtcga tgtattggga acgcctgttg acgaggcagg tccgatcgat
    10561 accgacaaga gtcgtgccat ccaccaagcc gctcctaagt ttgacgaact gtcttccaca
    10621 accgaattgc tcgaaacggg cattaaagtg attgacttgc tgtgtccgtt tgccaaaggc
    10681 ggtaaagtag gtctgttcgg cggtgccggt gtgggtaaaa ccgtgaacat gatggaattg
    10741 atcaacaaca tcgccaaagc gcacagcggc ttgtccgtgt tcgcaggcgt gggtgagcgt
    10801 acccgcgaag gtaacgactt ctaccacgag atgaaagatt ccaacgtatt ggataaagtg
    10861 gcaatggttt acggtcagat gaacgaacct ccgggcaacc gtttgcgcgt cgcattgacc
    10921 ggtttgacca tggcggaata cttccgtgac gaaaaagacg aaaacggcaa aggccgcgac
    10981 gtattgttct tcgtggacaa catctaccgt tacactctgg ccggtaccga agtatccgca
    11041 ttgttgggcc gtatgccgtc tgcagtgggc taccaaccga cattggcaga agaaatgggt
    11101 cgtttgcagg agcgtattac ctctacccaa accggttcta ttacttctat ccaagccgta
    11161 tatgtacctg cggacgactt gaccgacccg tctccggcaa caacgttcgc ccacttggac
    11221 gcaaccgtcg tattgagccg cgatattgcc tctttgggta tttacccggc agtcgatccg
    11281 cttgattcca cttcgcgcca actggatccg atggtcttgg gtcaagagca ctacgacgtg
    11341 gcgcgcggcg tacagtccac cctgcagaaa tacaaagaat tgcgcgacat catcgccatc
    11401 ttgggtatgg acgaattgtc tgacgaagac aaactgaccg taatgcgtgc gcgtaaaatc
    11461 caacgcttcc tgtcccaacc gttccacgtt gccgaagtgt ttacaggttc tccgggcaaa
    11521 tatgtcgccc tgcgcgatac cattgccggc ttcaaagcca tcttgaacgg cgaatacgac
    11581 catctgcccg aacaggcatt ctacatggtc ggcagcatcg aagaagcggt tgagaaagcg
    11641 aaaaccttaa actgaggagg tcggcatgag catcatgcaa gttgaggtgg tcagtagcga
    11701 gcaaaacatc tattcgggcg aagccagctt tgtagtggtt ccgaccgttc aaggtgagct
    11761 tggtatttac ccgcgacacg agccgattat gagtttggtg cggccggggg ctttgcgttt
    11821 gaccgttccg ggcgaggata aagaggtttt ggttgctgtt tccggcggtg ttttggaagt
    11881 acagcctgat aaagtaactg tcttggcgga tgttgccgtc cgcagtgcgg agatggatca
    11941 ggcacgtgcg gaagaggcga aaaaagccgc agaagcgggc atttcccaag ctaaagacga
    12001 taaggctttg gcggaggcgc ataaagcatt ggctgctgcg attgcacagc tcaaaacttt
    12061 ggactatatc cgttcgcaca agaaataaac ttgtttggtt tggaaaagca cgaccgtttg
    12121 gtcgtgcttt ttatttttcc aagttttg
//
LOCUS       DAXHRP010000045        12073 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.045, whole genome shotgun sequence.
ACCESSION   DAXHRP010000045 DAXHRP010000000
VERSION     DAXHRP010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12073
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.045"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACFM72_000941"
     CDS             complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACFM72_000941"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HFC6257526.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFTQSTRGIIR"
     gene            complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACFM72_000942"
     CDS             complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACFM72_000942"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HFC6257527.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACFM72_000943"
     CDS             complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACFM72_000943"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HFC6257528.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPTSCEIGANVYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDTGQDSK"
     gene            complement(2757..3257)
                     /locus_tag="ACFM72_000944"
     CDS             complement(2757..3257)
                     /locus_tag="ACFM72_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HFC6257529.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACFM72_000945"
     CDS             complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACFM72_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HFC6257530.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKQYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACFM72_000946"
     CDS             complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACFM72_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HFC6257531.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQSDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACFM72_000947"
     CDS             complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACFM72_000947"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HFC6257532.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFQPEYAVVADAEYAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYTGRLNEHGIRSIILTASGGPFLTTDLGTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGVAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(8388..9185)
                     /locus_tag="ACFM72_000948"
     CDS             complement(8388..9185)
                     /locus_tag="ACFM72_000948"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HFC6257533.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADVCAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSKLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(9188..9934)
                     /locus_tag="ACFM72_000949"
     CDS             complement(9188..9934)
                     /locus_tag="ACFM72_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HFC6257534.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACFM72_000950"
     CDS             complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACFM72_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HFC6257535.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(10727..11854)
                     /locus_tag="ACFM72_000951"
     CDS             complement(10727..11854)
                     /locus_tag="ACFM72_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HFC6257536.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLADCSKMIAEISNGRRMTRERLEENMAKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(11930..12005)
                     /locus_tag="ACFM72_000952"
     tRNA            complement(11930..12005)
                     /locus_tag="ACFM72_000952"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11970..11972),aa:Thr,seq:cgt)
BASE COUNT         2262 a         3081 c         3768 g         2962 t
ORIGIN      
        1 tttaaaacac cacttttgta gtgtcctgta atttcagcac agaatattca ataagacaat
       61 atgttctttt gaaaaatact tttggttttt tctccgaaag caggtcggtt caagctgcgg
      121 aaattgtttg caattcttta aaagcagcgg cggaggtcac aatgaaatgt ccgaataggg
      181 atgtggcggg cggcagaaat catcaatgct gccgactgcc atacttctga aatctacaaa
      241 atgatgcatc gatcaaacaa tataccgctt taaaaaaacc gatgccgtct gaaacgcttt
      301 ccgggtttca gacggcatca aaagggtacg gtcagcggat gatgccgcgc gtcgattgtg
      361 tgaaaaagtc tcggaatacg gcaagctcgg cttgggtttc ggcgcggcgg aggatgtctg
      421 ccttggcctc ttcaaacgga atgccgcgat ggtagagggt tttgtacacg tctttgacgg
      481 cggaaatctg ttctgcggta aaaccgttgc ggcgcatgcc ttcgctgttg agccccgccg
      541 gttcggcgcg gtagcccgat gccataaagt agggcggcac gtctttgtgt acgcctgcgg
      601 caaacgcggt catggcgtag tcgccgatgc ggcagaattg gaaaaccagc gtgtagccgc
      661 ccaaaacgac gtagtcgccg atggtaacgt gtccggcaag cgaggcgttg ttggcgaaaa
      721 tggtgtggtt gccgaccacg cagtcgtgcg cgaggtggca gtacgccata atccagttgt
      781 cgtcgccgat acgggtttcg ccgatgccgg ttaccgtgcc taaattaaag gtggtgaatt
      841 cgcggatggt gttgccgttg ccgataatca gcttggtcgg ctcgtcgcgg tattttttgt
      901 cctgcgggat ttcgccgagg ctggcaaatt ggaaaatgcg gttgttttcg ccgatgctgg
      961 tgtggccgtt gatgacggcg tgcgggccga tttcggtatt cgcgccgatt tggacgttgg
     1021 ggccgatgac ggtgtacgcg ccgactttga cgccggagtc gagttcggct ttggggtcga
     1081 tgacggcggt cgggtggatg agggtcatgt ttttcctttc ctgtcgtgtt gccgcgaaga
     1141 tgcgcgacgg caacaggtcg tctgaaaact ttcagacgac ctttttctga acactcaaac
     1201 cacgcgtttg gcacacatga tgatggcttc gacggcgact tgcccgtcca ctttggcaac
     1261 ggcgttgaat ttgccgatgc cgcgccggct ggtcagcagc tcgacttcaa agacgagttg
     1321 gtcgccgggg atgacttggc gtttgaaacg ggcttcgtct atgccggcga agaagaagaa
     1381 ttcgttttct ttgcgcccgc cttcgctcaa aatcgccaac gtgccgcacg cctgcgccat
     1441 cgcttcgatg atgagtacgc cgggcatcac gggcaggtcg gggaaatggc cttggaactg
     1501 gggttcgttt atggtgacgt ttttaatcgc ggtcagggtt ttcatcggct cgaaggcggt
     1561 gatgcggtcg agctggagaa acggatagcg gtgggggatg agtttttgga tgtctttggc
     1621 ttcgatgggg agttgtacgt ccatgtctgt cgtattcctt gaataaagtc ggtttggtta
     1681 tttgctgtct tgaccggtat ctgaaagctg ctgctctagt gttttgagcc gtttgttcat
     1741 ttcgcttaag cggtggatgt aaacagcgtt gcgcgcccat tctttatggg tggacatcgg
     1801 gaagatgccg gcgaggtgtt tgccgctttc ggtaatgctg tgggtgacgg acgtgccgcc
     1861 gccgatggtg gttttgtcgg cgatttcgat gtgtccgacc gtaccgacgc cgccgccgat
     1921 gatgcagtag ctgcctatgg ttacgctgcc tgagatgccg gttttggcgg cgatgacggt
     1981 gtgcgaaccg attttgcagt tgtgtccgat ttggacttgg ttgtcgattt tggtgccgtt
     2041 gccgacggtg gtgtcgctca tcgcgccgcg gtcgatgttg gtgttcgagc cgatttccac
     2101 gtcgtcgccc agcgttaccg cgccggtttg cgggatttta aaccatgaat cgccggcaaa
     2161 agcgagtccg aaaccgtccg cgccgatgac cgcgccgctg tggatttcga cgcgtctgcc
     2221 cagtgtgcag ccgtaataaa cgacggcgtt gggatgcagg acgacttcgt cgcccagttt
     2281 gcaatcgtgt tggacgacgg cgtttgccaa gatgcggcag ccttcgccga gcacggtgtt
     2341 tgcgccgatg tagacgttcg cgccgatttc gcagctggtg ggaacggtcg cgcccggttc
     2401 gacgacggcg gtcggatgga tgccgccgcg cgctttgacg acgggtgaaa acaggcgggc
     2461 gactttggcg aaatagagat aggggtcgtc ggcgacaatc aggttgcgcc cttcaaatcc
     2521 gtctgccgct ttggcggaaa cgatgaccgc gcccgcgctg ctgtcgtgga cttcggcttt
     2581 gtatttcgga ttggcaagga agctgatgtg ttccgcctgc gcgtctgcga gcgggcgcac
     2641 ggcggtaacg gaaatgtcct cgccgcgcca ttcgccgccg agccgcgcgg tgatttggga
     2701 cagggtgtag gtggccggaa tcatggtttt cctgttcggt atgccgtctg aaagggtcag
     2761 cgggcgttca tttctttaat gacgctgtcg gtaacgtcgt attgggtgtt gacgtaaatc
     2821 acgttctgca aaatgacatc gtaaccttcc tgtttggcga ttttgacgat gacgcggttg
     2881 gcgttttgct ggagggaggc aaactcttcg ttgcggcgga ggttgtagtc ttcttcaaac
     2941 tgcgcctgtt ttttgcggaa cgctgcgacc agcccgcgcc atttttcttc ggcttgcgcc
     3001 ttttttgcgt ttctgagttt gccttcggca agctgccttt ccaaatccag accttcgcgt
     3061 tgcagttttt gcaattcgtc ctgacgagcg gaaaattcgc tgtccagcgt tttttgaatc
     3121 ttgcgcgcct gcttggattc gaggtagatg cgctcggtgt tgataaagcc gattttttgg
     3181 aaggtgtcgg cgtgcgcgcc tgcggtgcag cacaaaccga tcagagccgc ggcaaacgcg
     3241 cgggtcaaac gggtcatggt aaaactcctt cgaatgttgc cgcgaaatgc cgtctgaagg
     3301 gcttcagacg gcatttgcgg gattagaacg tcgtgccgag ttggaattgg aagcgttgga
     3361 tttcgtcttc cggttttttc ttcagcgggt aggcgtagct gaatttcatc gggcctaaag
     3421 gcgagagcca ggtaaccgcg ccgccggcgg aatagcgcaa ttcgttggta aaggtggatt
     3481 tatgggtatt gccggcgccg taaatgtttt gaaccctgcc gccggtcgcg gaactgctgt
     3541 tgtcgtcgta ggttttgccg tcccacacgc tgcctgcgtc ggcaaacagg ctcaggcgga
     3601 cggtgcgcgc gtctttcgcg ccaggcatcg ggaagagcag ctcggcggag acgttggctt
     3661 ttttgttgcc gccgtagctg attttttcgc cgtattcgtc atagactttc ggaccgagtg
     3721 tgccgctttc gtaacctcgt accgaaccca ggccgccgcc gtagaagttt tcaaagaagg
     3781 ggatttcttt ggttttgccg tagccgttgg catagccgat ttcgccgcca agcatcagtg
     3841 tgaaggtttt gctcaggggg aagaaccagg tttggttgtg ggtggcggag tagtattgca
     3901 gtttgctgcc gggcagggcg atttcggcgt tcacgcccgt caggtagccg cgcgtcggcc
     3961 ataacgcgct gtcggttttg ttgcgccccc agccgacggt acctttgtac agccagcctt
     4021 tgaagctgcc gtctgtgccg tcggttttgc cgtattgttt gataaagtcg gcatagtgtt
     4081 tgggcgcttt gttgtaggtg ttgacggtca ggtgttctgc caccaaaccg aaattcacgc
     4141 ggtcgtattc ggtaacaggt acgctcatgc ggatgcctgc gcctgccgtg gtggttttat
     4201 attgtttgat gctggtcgat gctttgcgcg ggtcgaaggc ttttccgtaa acatcgtagc
     4261 ccaggctgac cccgtctgcc gtgaagtacg ggtcggtaaa cgacagcgag ccgttgagcg
     4321 tggttttgct tcgtgaggcg cgcagggcgg ccgacttgcc cgtaccgaac aggttgtctt
     4381 gggaaacgcc tgcggacatg accaggccgg tatcctgtac ccagcccgcg ctcaagtcga
     4441 gcgagccggt ggaacgttcg gtcaggctca tgttcaaatc gactttgtcg ggtgtgccgg
     4501 caagcgggac ggcatcaaac tgtacgttgt cgaagtagcc caaaagctcg acgcgctctt
     4561 tggagcgttg cagcttggag gtgtcgtaag gcgcggattc catttggcgc aattcgcggc
     4621 gcacgacttc gtcgcgggtt ttgttgttgc cggtgatgtg gatttcgttg acgtagattt
     4681 tccggcccgg ttcgatgtgc aggacgaaat cgacggtttt ggtttcggcg tttggcagcg
     4741 gctgtacgct gatttcgctg tatgcgtagc ctgccgagcc catgcggttc tgaatctcac
     4801 ccaaaacggc ggtcatctgc tggcgttcgt accatttgcc gggcttcatg gtcagcagtt
     4861 tttccagttc ggctttgggg acttcgttgg tgtcgccttc gatggagact ttgccccaac
     4921 ggaaacgtcc gccttcgtgg acggtgattt tgatggtctg cttggttttg tcttcgttgg
     4981 tttggatgtc ggtatcgagg atgcggaaat cgaagtagcc gttgttctgg tagaagtcgg
     5041 ttactttttc catgtcttgg gcaaatttct gctcgttgaa ttggttgctt cgtgtcagcc
     5101 atgtccaaat gccgccttcg gtcagcgaca tctgccgcat cagtttgcgg tcggaataga
     5161 cttggttgcc ttcaaattcg atgtcggtga ttttggcgga tttgccctcg tcaatcgtga
     5221 tgtcgatgtc gacgcggttg cgggcgagtt tggttacttt gggcgtgatt tggatattga
     5281 gtttgccgcg cccgaggtat tcttctttca ggccggcgac tgcctgattg agtgtcgcct
     5341 gattaaagta ttgcgactgc gccagcccga acgattcgag gtttttctta atggcgtcgt
     5401 tttgcagcat ttttgcgccg gtgatgttga gcgagccgat ggtggggcgt tcgataacgg
     5461 tcagcaggag ctgcccgtcc gcagtttcga cgcgtacgtc gtcaaagaaa ccggtggcgt
     5521 acaggctttt gatgatggca ctgccgtgtg tgtcgttgta ggtgtcgccg actttgacgg
     5581 gcaggtagtt gaatacggta ctcggctcgg tacgctgcaa gccttcgacg cggatgtctt
     5641 ggatggtgaa gtcggcaagt gccaaaggcg atatgcccaa gaccatcagt gcggaagcaa
     5701 tctgtttcag tttcattgtc agttccttgt ggtgcggaat gcggtttcag acggcattcc
     5761 gaaacgtaaa atctaaccga gcagccgggt aacgtcgttg aagaaggcga ccgccatcat
     5821 cagcatcatg agggcaagcc cgaagcgcaa accgatgttt tggacgcgtt cgcccaaagg
     5881 tttgccgcgt atccattcgg cagtataaaa cacgaggtgg ccgccgtcca aaacggggac
     5941 gggcagcagg ttcagcacgc cgaggctgat gctgaccagt gccaaaaatt ccaaataact
     6001 ttgcaagccg agttcggcgg actgtccggc aatgtcggca atggtcagcg gcccggaaat
     6061 atggctgacg gaggcgttgc cgctgattag tttgccgaaa aatttgaggg ttgtccacga
     6121 gtgggaaacg gttttttccc agcccatgcc gaatgcgcgg ataacagacg gacggtagct
     6181 gcggcggatt tgcgcgtccc acgccctgtc cggctgcgga cggaggccga cgcgcccgat
     6241 cagggtgtgg tcggactgtt cgacagtatc ggggcggatg tcggcggtat gggtttgtcc
     6301 ggcgcgttcg tagttcaggg tgattttttt gccggggctt tggcgggtca ggtttgccca
     6361 ttcctgccat gaggcgatgg gtttgccgtc ggcggcagtc agcctgtcgc ccggtttcag
     6421 gcctgctttt tcggcggggc tgcctttttc cacgccgccg gcaacggttg tgattttaaa
     6481 gggcatcagt ccgatgtagc cttggttttt tgcgatttta ccggcttccg gcgtgcctgc
     6541 ggcatcgatg gtgcggacgg tttgcgcgcc cgatgccgtc tgaacgccga cggcgacttt
     6601 gccggcttcg aggttgagga cgatttcggt ttgcgcgctg ccccaatctg caacgggtgt
     6661 gccgttgacg gattgtattt tgtcgccgct ttggaagccg gcgcgggcgg caatggtgtc
     6721 gggttcgact gtgccgacgt aggggcgcag ttcggttacg ccgaaggaaa agctcagtcc
     6781 gtacagcaaa accgccagtg cgagattggt cagtgggccg gcggcgacga tggcgatgcg
     6841 cttggcgggg tgttgtttgt caaaagcgta gggtaaatcg gcttctgata cttcgccttc
     6901 gcgcgtgtcg accattttga cgtaaccgcc caacggaatc ggggcgaggc accattcggt
     6961 gtcgccgcgc tttcgggtga aaaacggttt gccgaagccg acggaaaagc gtacgacttt
     7021 gacaccgcac aatctggcaa cgatgtagtg tccgaactcg tgcaggctga ccaaaatcag
     7081 gatggcgaag ataaaagcta gaagggtgtg caaatggttt tcctttgata acggtgttca
     7141 gacggcatca gcgcagtgtg ccgataaatg cccgcgcttg tgcgcgtgtc cgggcatctt
     7201 gcgccaagag cccccctatg tcgcctatgc cgtctgaaaa gtcttgtgaa agacaatggg
     7261 cgacggtttt ggcaatgtcg gtaaacttaa tctgtccgtc caaaaaggcg gcgacggcgg
     7321 cttcgttggc ggcgttcaat acgcagggcg cgaccccgcc cgcgttcatg gcttcatagg
     7381 cgagcttcag gcaggggaag cggtcaaagt cgggcttttg gaaggtcagc gcggacaatg
     7441 cgtcgaaatc caggtcgccg acacccgaat cgatgcgctc gggcaaaccc aaacaataag
     7501 cgataggcgt tcgcatatcg ggattgccca gttgcgccaa cacggagccg tcgcggtagc
     7561 gcaccatgct gtgtatcacg gattgcggat ggatgacgac ttcgagtttg tcgggcggac
     7621 agttgaacag ccaatgcgct tcaatcagct ccaaaccttt gttcatcatg gtggcggaat
     7681 cgacggagat tttgcgcccc atgctccaat tggggtgttt gaccgcttgg gcgggcgtaa
     7741 tgctgtcgaa cgtgcctaaa tcggtcgtta aaaacgggcc gccggaagcg gtcaggataa
     7801 tcgaacggat gccgtgttcg ttcagacgac ctgtgtaatc gcgcggcaaa acttggaaaa
     7861 cggcgttgtg ttcgctgtcg acgggcagca ctgccgcgcc gtttgcacgg gcggtttcca
     7921 taaacaacgc gccggaaacc accagcgtct ctttgttcgc cagataaatg gttttgcctt
     7981 tttgcgccgc tgcgagcgcg gaaggcagcc ccaccgcccc gacgatggcg cacatgacac
     8041 cgctgacttc gtcggcagag gcaacgtcaa ccaatgcctg cgcgccgtgt aaaacctgcg
     8101 tcgccgtgcc gtcgcgtttc aacagggctt caagccgggc ggcgtattcg gcatcggcaa
     8161 cgacggcata ttcgggttgg aacgtttgac attgagccgc cagtttctcg acctgcttat
     8221 gccctgccag cgcgaatacg cggaattttt cggggtggcg ggagacaacg tccagcgtgc
     8281 tttcacctat gctgccggta ctgcctaata tggtcaggac ttgtggtgtc ataatgagga
     8341 taactttata ccggatgccg tctgaagcgt tttcagacgg catagaatca atttaaaacc
     8401 gacatcatcg ctgcatagac gctgataacg gcaatcaggc tgtcggtacg gtcgaacacg
     8461 ccgccgtgtc cgggcagcag cttgctgctg tctttgatgc ctgccgcgcg cttgagccag
     8521 ctttccaaaa ggtcgccgca tacgctgaca acggtcagca ccaaaccgat taacacggta
     8581 tcgaaccagc ctgtatcgaa tgccagccag ccggcacttc gtacggcggt catgtacact
     8641 gccacgcaaa ccgcgccgcc gattgcacct tcccagcttt tgccggggct gattgccggc
     8701 gcgattttgt gtttgccgaa cgccttgccg ctgaaatacg cgcaaacgtc ggcaacccag
     8761 accagaccca tcacggcgag cagcggcagg gcatcatcgg gatgcgggcg cagggatacg
     8821 agcgcgaacc aaaacggcat aaccaaaagc cagccgacgg cataaacctg ccaaccgccg
     8881 ttgagcctcc atttgaatct caaccataaa ggcatgatgg caagccaaaa tgccaaaaca
     8941 acataccaaa ccaaattagg cagcatccag ccgcccgcat aggcaaccac gccgaaaacc
     9001 aaggttgcgg cgaggtaatg gttggttttg attttgcaca agccgcccat acgggcatat
     9061 tcccacaagg caatcagggc aatcagtccg caaaatgcag cccacaacca ttgcggcgcg
     9121 taaaacagca tgcccagcat cagcggcagc agccacatag cagttatcac ccgttgtttc
     9181 agcatattca gttcctttgc tgttcgatag gcagttgctc ggaggtgcgt ccgaaccgcc
     9241 gttcgcgttt ttggaacgaa gcgacggcat cgtccaaagc cttgccgtca aaatcgggcc
     9301 acaaaatatc ggtgaaatac agttctgcat atgccatctg ccagagcagg aaattgctga
     9361 tgcgcgtttc gccgccggtg cggatgaaca aatccggttc cggtgcatcg cccagcatca
     9421 agtgtttcgc cagcgtgtct tctgtaatct cggatacgcc ttcggcaatc agtttgtttg
     9481 ccgcctgcaa aatatcccag cggccgccgt aatcggcggc aatgctcagg gtcaggccgg
     9541 tattgtttgc cgtcaacgcc tccgcttctt cgatgccttg cagaatctgc cggttgaagc
     9601 gttcgcggct gcccagtatt ttcaggcgca tattgttttc gtgcagacgg cgtacctgtt
     9661 tttgcaaagc ctgtaaaaac agccccatca ggaacgaaac ttcgtcttcg gggcggcgcc
     9721 agttttcggt tgaaaaggca aacacggtca gatattgcac acccagtttg gcgcaatgct
     9781 tcaccatatt ttccaatgcg tccaaaccgc gtttgtgtcc cattatgcgc gggaggaaac
     9841 gttttttcgc ccaacggccg ttgccgtcca taatcacggc gatatgcttg ggaatggcgg
     9901 tgtgttccaa aacggcctgc gtgctgcttt tcatgtctgc ctttcgcggt tcggcattca
     9961 aatgccgtct gaacgccgaa ccgtgcaggt taaattgcca tcaaatcttc ttctttggca
    10021 gtcaggagtt tgtcggcttc ggtaatgtat ttgtcggtca gtttttgaac cgcttcttcg
    10081 ccgcgacgtg cctcgtcttc ggaaatttct ttgtctttga ggagtttttt gatgtggtcg
    10141 ttggcatcgc ggcgcacgtt gcggatagag acgcggcctt cttccgcttc gccgcgtacg
    10201 actttaatca ggtctttgcg gcgttcctcg gtcagcatgg gcatcggtac gcggatcagg
    10261 tcgccgacag ctgccgggtt cagtcccaag tttgaatcgc ggatggcttt ctcgactttg
    10321 gccgccatat tgccctcaaa cggtttcacg ccgatggtgc gcgcgtccag aagcgttacg
    10381 ttggcaactt ggctgacggg gaccatgctg ccccagtatt cgacttccac ttggtcgagc
    10441 aggccggtat gcgcgcggcc ggtacgcact ttcgccagat tttctttcag tacttcgacc
    10501 gaacgctgca tcttgccttc ggctgttttt tgaatatcgt tgatcatatt gttctttcgg
    10561 tgggataagg tgggcgggag accgtctgaa cgcgtttcaa gccgttcaga cggcataaag
    10621 accgttaacc gcgaatagta ccgttattcg ggcataacga caaggtaggc ggattgggga
    10681 tgccgtctga agcgacaggc gtttcagacg gcatcgtgtc cgaccgtcag ccgtgttccc
    10741 gtgtttcaag caggctttgg cgcaggtgtt ggcgttcgtg ggcatccagc catttgcggc
    10801 gggtgcgttg cagcaggatg acgagggcgg aaatttcctg acgcatattg gtgctgagcc
    10861 agaggaagcc ctgccattgg tagtggaggt gttcggcgag ggcttccagt tcggggttga
    10921 tggcggtgtc gatgcggatg cggcgggcgt gtctgccgtt gataagggcg acggtttgtt
    10981 gcaggtcggt ttggagcagt gtgaagtggc ggtcaagcag ccggatttcg ctgccgttga
    11041 gtttgggaga ttgcagcttg gcggcggtgg tcaggagcag ctcggtggtg ttgacgattt
    11101 tacggtgggc gtgctgcatg gcttccatca tggcggggct gatgcggctt tcgcccgatg
    11161 tggcggcgag atggctgcgg cttttgacca tgcgtgcgtt gatttggcgc attttcgcca
    11221 tgttctcctc gaggcgttcg cgggtcatgc gcctgccgtt gctgatttcg gcaatcattt
    11281 tgctgcagtc ggccaggttg tcggcaagca tgaaacgcca catcagtgtg gatttcagcg
    11341 gcagcagttt ggcggcggcg atggcgatgg ccgcgccgat gaggacgttc atggcgcgca
    11401 tgagtccgct gtcgagccat tcgctgccgt tgtcgccgat gagcatacac atcgtcagcc
    11461 ctgccagcat agggacgtag ccgtttttgc cgaccgccgc ccagccggcc agtgcgcttg
    11521 ccgtgccgac ggtgaggtag aagaggaggt tgccgtggaa ataatgctgg ttcagccata
    11581 aaacgcccaa acccgcgccc agcccgatga ccgtgccgag catacgttcc accgccttgg
    11641 agtaaatcgc cccttgaaac tggagcatgc cgaggacgac gaagacggtc atccctatcc
    11701 actcgccgtg ttggaggtgg agcagccggg cggaggcggt ggcgaacagg acggccccgc
    11761 cgagccggac ggcgtggatg aggcggcggt agcggtagcg ttcgtaggag ttgagccagc
    11821 ggctgacgag gcggttgcgt tgcgaggtgt tcatatcggt tgtgccgtct gaagcggaaa
    11881 tgtgaaaaag cacaggcttc ccgaggaagg gagggtctgt gcttggtatt ggtgccggag
    11941 aagggaatcg aacccccgac cttcgcgtta cgaatgcgct gctctaccga ctgagctaca
    12001 ccggcgtttt ttcgtcatga tatatatgaa cggttgtttg tgcaactttt cgggcgggcg
    12061 gcaaggcagt gcg
//
LOCUS       DAXHRP010000046        12063 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.046, whole genome shotgun sequence.
ACCESSION   DAXHRP010000046 DAXHRP010000000
VERSION     DAXHRP010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.046"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            122..541
                     /locus_tag="ACFM72_000953"
     CDS             122..541
                     /locus_tag="ACFM72_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HFC6257537.1"
                     /translation="MKKTFLSAVLLLSAATQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRQGIGRARWATMKFQNGEFMYTVDAGFDSMT
                     HTVGSGVLVERRGKEVARVDCTPKTAQANFDDDDFAW"
     gene            573..1313
                     /locus_tag="ACFM72_000954"
     CDS             573..1313
                     /locus_tag="ACFM72_000954"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HFC6257538.1"
                     /translation="MLIVRPSGRAKDDVEICRRTGWQAEVLSPIEIETDKASLKRLPE
                     MYARADAVFWVSPTAVETAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGN
                     DSEAVLRLTVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNF
                     QNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSV
                     ETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            1328..2662
                     /locus_tag="ACFM72_000955"
     CDS             1328..2662
                     /locus_tag="ACFM72_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HFC6257539.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLMLDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLLSPEQAYFVRENLRLRLLDARIALMQRNGEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            2659..3882
                     /locus_tag="ACFM72_000956"
     CDS             2659..3882
                     /locus_tag="ACFM72_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HFC6257540.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDEIGEPQKAEAQRNLVLE
                     AVSDDERHAALEQHS"
     gene            3915..4355
                     /locus_tag="ACFM72_000957"
     CDS             3915..4355
                     /locus_tag="ACFM72_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257541.1"
                     /translation="MGSSDSFKEKKEIFEIGTPAYRQKLIDVWKKSINGNEKSWVLFE
                     NGTCVILLEPEKDLAKQAKEMLSKWGKVQIGTPSADFGIITLDSGDGYAVSCHHPEIF
                     TLILKEEGLDEDFKIGIEGRSHRDCDAEEPKVIHIEDKRTIETP"
     gene            4509..5573
                     /gene="hemE"
                     /locus_tag="ACFM72_000958"
     CDS             4509..5573
                     /gene="hemE"
                     /locus_tag="ACFM72_000958"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HFC6257542.1"
                     /translation="MISLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEADIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            5759..7138
                     /gene="radA"
                     /locus_tag="ACFM72_000959"
     CDS             5759..7138
                     /gene="radA"
                     /locus_tag="ACFM72_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HFC6257543.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSAVTAAEVPRNPTGMSELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(7413..7892)
                     /locus_tag="ACFM72_000960"
     CDS             complement(7413..7892)
                     /locus_tag="ACFM72_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HFC6257544.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPSTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAAHRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(8024..8383)
                     /locus_tag="ACFM72_000961"
     CDS             complement(8024..8383)
                     /locus_tag="ACFM72_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC6257545.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(8422..12036)
                     /gene="recB"
                     /locus_tag="ACFM72_000962"
     CDS             complement(8422..12036)
                     /gene="recB"
                     /locus_tag="ACFM72_000962"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HFC6257546.1"
                     /translation="MSASIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAELGDGALSDGIAAYCAE
                     HHEGDTFLPELLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVEMTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGYD
                     LNALEEAEEATIIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTENAPPPAAYRSNAGQTAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICIIDYKSNHLGADASAYTQQAMDEAVTHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGTDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         2664 a         3145 c         3551 g         2703 t
ORIGIN      
        1 gtgccgccct atgtgttgcc ctaatttgga aggggttaca cccttttcaa ataaaatctg
       61 atgctgccgc cacgaaggac ggatgtccaa gtggcggggt tttaaccatt aaggaaatac
      121 gatgaaaaaa acgttccttt ctgccgtatt gcttctgtcg gctgcgaccc aaaccgtgtg
      181 ggcagatacg gtgttttcct gtaaaacgga caacaacaaa tatatagaag ttcaaaaaat
      241 caaccgcaat ctttacgaat attcgttcgg cagtgcggca aaaaaagaaa ttgccatacg
      301 caacagcaaa gctgacctgt tggggcgttc cgacaggcaa ggcataggca gagcccgttg
      361 ggcgacgatg aaattccaaa acggcgaatt tatgtacacc gtagatgcag gcttcgattc
      421 catgactcat acagtaggta gcggtgtcct tgtggagcgc aggggcaagg aagtcgcacg
      481 ggtcgactgt acgccgaaaa ccgcgcaggc gaatttcgac gatgacgatt ttgcctggta
      541 atccccgata atggaattta atgatgccga ctatgctgat tgtccgtccg tcgggcaggg
      601 cgaaggacga tgtggaaatc tgccgtcgta ccggatggca ggcggaagtg ttgagtccga
      661 ttgaaatcga aaccgacaaa gcaagcctga aacggctgcc ggaaatgtat gcccgtgcgg
      721 atgccgtgtt ttgggtcagt ccgaccgccg ttgaaaccgc cgtcccgtac cttaaccttt
      781 cagacggcat aaaggcgcag attgccgtag ggcagggcag ccgccgcgca ttggaacgct
      841 gtttggtcag aacggtcatc gcgcctgatg acggcaacga cagcgaggcg gttttgcgcc
      901 tgacggtttg gaacagtctg cccgaaggtg cgcgcgtatt gtttgtgcgc ggacacggcg
      961 ggcgggattt tctgatgaat gccttgcagg agaaaggttt tcggacggag gtggcagaag
     1021 tctatttcag acggcataaa cctttgaact ttcaaaattt ccaaaccgaa aatattgccg
     1081 ccgcctatat tacgtccaca gaactcgtgc gcttgctgtt cggacagctt ccgccgcaat
     1141 tttcccgatt cttcaaatcc ttgctatact ttacccatca tccgcgcatt gcggaggcat
     1201 tgaagcgcga aggcgtgtgt tcggtcgaaa ccgtccctac gctggaagcc gcgctttccc
     1261 attcttccat ttccgtttca gacggcatgg tctttcccgg aacctcaaat taataaggag
     1321 caaaacggtg ggcgaacctg aaaacaaatc atccgaaccc gtacgcgaga tacaggcatc
     1381 aaaagaaatg ccgtctgaaa cctcttcccc acgcaaagaa aacgaaacag aagtacacat
     1441 tcctgccgct ccttttatcg tcaaacagtc cggcagcaac gctttggcag tctgcgccct
     1501 ggtattggcg gcattgggtt tgggtacaag tggttttttg tttgtccaag gacagaatgt
     1561 cttgaaaaac caagagctgg cattcaacca aaaaatcgac aaagccgcct tgggcgagtc
     1621 ggaaaacgcc gccctgttga aagacaacct caaccggcaa gccgccatac aatcagagct
     1681 cgaccgtttg gacggaaacg tcaaagcaaa cggcgaacaa atcttggaaa tgcaaaaatc
     1741 ctatcgcgag ttgaccaaag gacgcgccga ttggctggtg gacgaaaccg agaccatact
     1801 caatctggcg gcgcaacagc tggtgttgac tggcaatatc caaacggcag tcggcgtatt
     1861 ggagcatatc gacagccgcc tgtcccgttt caatcaggca gagcttctgc cgatcaagca
     1921 ggcggtcagc agcgacttgg cggaactgaa aaaccgtccc tatgtcgata tttccggcac
     1981 ggcattgcgc ctcgacaggc tggaaaccgc cgtatccgga ctgccgctga tgctcgacgg
     2041 cgtattgaaa ccgggcgtac aggtgaagaa cgaagccgct tctgcttcat ggtggcagaa
     2101 cgtatgggaa aaatccctcg gcacattgaa ggggctggtc gaaatccgcc gtttggaaaa
     2161 caacgatgcc atgctgcttt caccggaaca ggcatatttt gtgcgtgaaa acctgcgcct
     2221 ccgccttttg gatgcgcgca ttgcattaat gcagcgcaac ggcgaagtct atcagggcga
     2281 tttgaacaat gccgaagccg ccgtcagaca gtatttcgat gccaagtctc ccgccacgca
     2341 gtcgtggctg aaagaactgg cggaattgaa ggcgttggat gtgcgcatga cggcggatga
     2401 cggtttgaaa aacagcctaa atgccgtccg cgcctatcgc gacggtacgc gcatgacggc
     2461 ggcggaaaat caagaagcgg aacaggcggc ttccgaaccg gcaaacgaaa acacagcttc
     2521 cgaaccggct gccgcatcgg atgtgaagac catagaagca ccgtccctgc cttcggaacg
     2581 caaaccggaa cagcctgcaa aaaaacagcc cgtaccggaa aaggcagggc gttcgccgtc
     2641 cgctaaagga gaacgcgcat gaaaacggta gtctggatcg tcgtcctgtt tgccgccgcc
     2701 gtcggactgg cactggcttc gggcatttac accggcgacg tgtatatcgt actcggacag
     2761 accatgctca gaatcaacct gcacgccttt gtgttaggtt cgctgattgc cgtcgtggtg
     2821 tggtatttcc tgttcaaatt cattatcggc gtattcaata tccccgaaaa gatgcagcgt
     2881 ttcggttcgg cgcgtaaagg ccgcaaggcc gcgcttgcct tgaacaaggc gggtttggcg
     2941 tattttgaag ggcgttttga aaaggcggaa ctagaagcct cacgcgtgtt ggtcaacaaa
     3001 gaggccggag acaaccggac tttggcattg atgttgggcg cacatgccgc cgggcagatg
     3061 gaaaacatcg agctgcgcga ccgttatctt gcggaaatcg ccaaactgcc ggaaaagcag
     3121 cagctttccc gttatctttt gttggcggaa tcggcgttga accggcgcga ttacgaagcg
     3181 gcggaagcca atcttcatgc ggcggcgaag atgaatgcca accttacgcg cctcgtgcgt
     3241 ctgcaacttc gttacgcttt cgacaggggc gacgcgttgc aggttctggc aaaaaccgaa
     3301 aaactttcca aggcgggcgc gttgggcaaa tcggaaatgg aacggtatca aaattgggca
     3361 taccgccgcc agctggcgga tgctgccgat gccgccgctt tgaaaacctg cctgaagcgg
     3421 attcccgaca gcctcaaaaa cggggaattg agcgtatcgg ttgcggaaaa gtacgaacgt
     3481 ttgggactgt atgccgatgc ggtcaaatgg gtcaaacagc attatccgca caaccgccgc
     3541 cccgagcttt tggaagcctt tgtcgaaagc gtgcgctttt tgggcgagcg cgaacagcag
     3601 aaagccatcg attttgccga tgcttggctg aaagaacagc ccgataacgc gcttctgctg
     3661 atgtatctcg gtcggctcgc ctacggccgc aaactttggg gcaaggcaaa aggctacctt
     3721 gaagcgagca ttgcattaaa gccgagtatt tccgcgcgtt tggttctagc aaaggttttc
     3781 gacgaaatcg gagaaccgca gaaggcggag gcgcagcgca acttggtttt ggaagccgtc
     3841 tccgatgacg aacgtcacgc agcgttagag cagcatagct gattttggga aatatcttta
     3901 tctgggagaa tttgatgggg tcttcagatt cctttaagga aaagaaagaa atatttgaaa
     3961 ttggaacgcc tgcttatcgc caaaagttaa ttgatgtttg gaaaaagagc attaatggaa
     4021 acgaaaaatc ttgggtgctc tttgaaaatg ggacttgcgt cattttactt gaaccggaaa
     4081 aagatttggc gaaacaagct aaagagatgt taagcaaatg gggcaaggtt caaataggaa
     4141 caccatctgc agattttggc attatcactt tagatagtgg cgatggatat gccgtttcat
     4201 gccatcatcc cgaaattttt acgctaatcc taaaagaaga aggattggat gaagatttca
     4261 aaatcggtat cgaagggcgc tctcatcgcg attgtgatgc tgaagaaccc aaagttatcc
     4321 atatcgaaga taaacgcacc attgaaaccc catgaaaacc tgctgccgtt taatcatcta
     4381 ctgatgatta cttaggcaaa tgtgcccgtc cctccctttt cagacgacct ttcattgcgg
     4441 aaaccgccgc aaaggttgtc tgaaaaccgt tttccttccc cgttttacaa acaaaccgaa
     4501 agccccacat gatctctttg aaaaacgaca ctttcctccg cgccctgctc aaacaacctg
     4561 tcgaatacac gccgatttgg atgatgcgcc aggcggggcg ttatctgccc gaatacaaag
     4621 ccacacgcgc gaaagcgggc agcttcctcg atttgtgcaa aaacaccgaa ttggcgaccg
     4681 aagttaccat ccaacctttg gaacgcttcg atttggacgc ggcgattttg ttttccgaca
     4741 tcctgaccgt ccccgacgca atgggcttgg gactgtattt tgccgaaggc gaaggcccga
     4801 aattcaaacg cgccctgcaa cacgaggccg acatcgccaa gctgcacgtt cccgatatgg
     4861 aaaaactgca atacgttttc gacgcggtaa cttccatccg taaagcattg gacggccgcg
     4921 taccgcttat cggcttttcc ggcagcccgt tcacactcgc ctgttatatg gtcgaaggcg
     4981 gcggcagcaa agaattccgc accatcaaaa ccatgatgta ctcgcgcccc gatttgctgc
     5041 acaaaatcct cgataccaac gcccaagccg ttaccgccta cctcaacgcc caaatcgacg
     5101 cgggcgcgca ggcggtgcaa attttcgaca cttggggcgg cgtgttgagc gacgcggcgt
     5161 ttaaagaatt cagcctcaaa tacatccgcc agatcgtcgc cggactcaaa cgcgaaagcg
     5221 aaggccgccg cgtgcctgtt atcgtatttg ccaaaggcgg cgggctgtgg ctggaaagta
     5281 tggcccaaat cggcgcagac gcattgggct tggactggac gtgtaacatc ggcgaagcac
     5341 gccgccgcgt cggcaagcaa gtcgccctgc aaggcaactt cgacccgttc gccctcttcg
     5401 gtacgccgga atccatccgc accgaggtcg cacgtatcct agccgactac ggacacggca
     5461 gcggccatgt cttcaacctc ggacacggca tcaaccaaca cgccgacccc gaacacgcca
     5521 aaatcttagt cgataccgta cacgagctgt ctcggcagta tcacggcggg taagccggca
     5581 ggaaaccgcc cgatatgccg tctgaagccg agagatggcc ggttagggta aaaataaggc
     5641 aatgcggcaa tatccgccgt gtacggatag tacatgacgg cggcgttgtc gtattggcgc
     5701 aatcccaacc gtccctatgt tcagacggca tttttgtttt cagatgcagg gaaaaccgat
     5761 ggcaaaaacg cttaaaaccc tttaccaatg caccgaatgc ggcggcactt cgccgaaatg
     5821 gcaaggcaaa tgcccgcatt gcggcgagtg gaacacgctt caagaaagct tagccgcgcc
     5881 cgagccgaaa aacgcccgct tccaatcttg ggcggcggat acctcgaccg tccaatccct
     5941 ctccgccgtt accgctgccg aagtgccgcg caacccgacc ggcatgagcg aactcgaccg
     6001 cgtattgggc ggcggtttgg tcgatggcgc ggtcatccta ctcggcggcg atcccggcat
     6061 cggcaaatcc acgctgttgt tgcaaaccat cgccaaaatg gcgcaaagcc gcaaagtgct
     6121 gtacgtttcc ggcgaggaat ccgcccaaca ggtcgccctg cgtgcgcaac gtttggaact
     6181 gcccacagaa ggtgtgaacc tgcttgccga aatccgtatg gaggcgattc agacggcgtt
     6241 gaaacagcat cagcccgaag ttgtcgtcat cgactctatc caaaccatgt attccgacca
     6301 aatcacgtcc gcccctggct ccgtgtcgca ggtgcgcgag tgtgccgccc aactgacgcg
     6361 catggcgaaa cagatgggca tcgccatgat actggtcgga cacgtgacca aagacggcgc
     6421 gattgccggc ccgcgcgtgc tggagcatat ggttgatacc gtgctgtatt tcgagggcga
     6481 ccaacattcc aactaccgca tgatacgcgc catcaaaaac cgcttcggcg cggcaaacga
     6541 actgggcgtg ttcgcgatga cggaaaacgg tttgaaaggt gtgtccaacc cgtccgccat
     6601 cttccttgcc agctaccgcg acgacacgcc cggttcgtgc gttttggtta cgcaggaagg
     6661 cagccgaccg cttttggttg aaattcaggc attggtcgat gacgcgcacg gattcacccc
     6721 caaacgactc accgtcggtc tcgaacaaaa ccgcctcgcc atgttgctcg ccgtgttaaa
     6781 ccgccacggc ggcatcgcct gcttcgatca ggatgtgttt ttaaacgccg tcggcggtgt
     6841 gaaaatcggc gaaccggcgg cggatttggc ggtcatcctc gcgatgcttt ccagcttccg
     6901 caaccgcccg ctgcccgaaa aaatggttgc atttggagaa atcggtttga gcggtgaagt
     6961 ccgccccgtc gcacgcgggc aagagcggct caaagaagcg gaaaaactcg gcttcaaacg
     7021 cgccatcgtt cccaaagcca atatgccgcg caacgccaaa gagtttccga acctgaaaat
     7081 ctacggcgtt tcgagtttgc aggaagccat cgatatttgc cgtgacagca gggaataaac
     7141 ggaaatgccg tctgaaatca ggtttcagac ggcatttggt ttgtggcgga ttgaaacaag
     7201 aaggcatacc ggcgacagat aagatttgcg gcaaagttgc ctgtgatatg gcaaaacgca
     7261 cacgcccgtc atccccgcaa gggcgggaat ccggaatcgt ccgtttcggc aatgattgaa
     7321 aatcacggta acccaaccgc ttggattccc gacttcgtgg gaatgagggg cgtgtgtgtt
     7381 tgatttccat ccgccatatg tcggcgacgg gcttattcgc ctacggtttt ttgtatcagt
     7441 ttttcggcgt ttgccaaagt gtttgccact tcgtcaaaac cgatgcggct gccggcgatg
     7501 agggcgcgcg tatcggtata ggcggcgcgt actttgccgt ctgtttcggt aacgaggacg
     7561 cgcaggggca gttgcagggc gaaggcgggg tctttgacca tcagcggcgt gccggctttg
     7621 ggcgtgccga agacgatgac ttttgccggc tgcatcgtta agccgtttcg gtgggcggct
     7681 tcctgatggt cgatgacggc aaaaatgtcc atccctttgc tttttatggc ggtttcaagg
     7741 cggctgacgg tttcgtcaaa actgtatttt gaggtgaggg tatgcgtggt catagcggtt
     7801 tcgttttggg tggacggttc gctggcagga tgtgccgaag cggttgaaat gcagagtgcg
     7861 gatgcggcaa tcagggggag tatgtgtttc atcgtatttc ctttttcctt ttcggtttgt
     7921 ttatcaggct tcggacgggg cggcacgcgc cgcgcccgat gttgcgccgc gtgccggaac
     7981 gccgtatgcc gtctgaaagc ctgtcctttc agacggcatt gcgtcatttc atcccttttt
     8041 tgagcaggtc ttcataaccg ccgtgattgg caacatttgt ataacctgct tttttcagct
     8101 cttgaagggc ggcttcggca cgccgtccgc tgcggcagta gaggttgacc ggcgtgtctt
     8161 tgtcgggcgc ggcttcgtgt atgcggcgga cgatttggtc gacggggatg ttgaccgcgt
     8221 tgtgcaaatg cccttcgcta aattcctgtt cggaacggac atcgatccaa acggccggat
     8281 gttgcgcggt ttgggcggcg gatacgggtt tttgcggggc tgcctgcgcg gcaaaggcgg
     8341 ctgaggcaat gagtgcggcg gtaatcaggt gtttgatatt catagggttc tcctgcggtt
     8401 gtcgttttaa gggacgggaa gttattttat ctgttccaaa gcggcggcat ctatgtccca
     8461 acgccaaacg ccgccgcctt tgccgtctgt gccgcgcaaa aacaggtagc ggacggaaac
     8521 ggcggcgggc ggttgtccgc gcagtttgaa gtagcgtgcg gcggcaacgg cgtaaatcag
     8581 cgcctgaagg taatagtggt ggtgcgtgac ggcttcgtcc atcgcctgtt gcgtgtaggc
     8641 ggatgcgtcc gcgccgagat ggtttgattt gtagtcgatg atgcagatat tgccgtcggg
     8701 gtcttggcag accatatcga taaagccgtt taaaaagccg ttgacggtgt ggaagtcgag
     8761 cgtttcggcg gcggcacggc agacttcggg cagcctgatg tcgtcgcggg caaaccagtc
     8821 gcgcagccgt ttgaggccga agtcttcggt atggagggta aagcccattt cgggacagcg
     8881 gcactcgggc ggaatgtcgg acaggcagta tgcccccgtc agcggcgttt tacggcaggc
     8941 ttccgccatt tcggcaacgg cgggcagcca tatttcttca aaaccgtatt ttttcagctt
     9001 gtcggcaatg agggtttcct gtccggcggc tgcttgtccg aatttgaaat cttcaagaat
     9061 ttcgtgcagg cacagccccg cctgcgtgcc tttcggaaaa tcgtgtatcg atatgccgtc
     9121 tgaagccgtc ggcgtttcag acggcatcgc cggcaccgag gtttcggcgg catccaagga
     9181 cgggcaggca tcttcttcgc cgccgtcggg cgtttgggta tggcggctta aggcggtaaa
     9241 gctagtgtgg cggacaaatc ggaatccgcg ttcgggaatg ctgtttgcgg caaattcggc
     9301 ggtttgaccg gcgttgctgc gataggcggc agggggcggc gcattttcgg tgaaggcgaa
     9361 atttgtgccg gaaggggcgt tgtccgccac gcgccgccag ttgcgtttga gcatcgcgat
     9421 gccgtctttt tcacacgcat aggcacggcg gacggtttca cggctgtctt ggggcgagcc
     9481 ttcaatcagg taggcgaggg ggttgtcggc agtattggtg gagtacgcgg cgtagatgtt
     9541 gagctgttcc tcggcacgcg tcagtgcgac ataaagcagg cgcaggcgtt ccgccatttc
     9601 ttcatcggcg tattgtttct gttcgtcttc cgacagttgc gcctttgcca acagttcggt
     9661 tcggtttgcg ctttggtgga ggatttgcca gtcggacggc ccggtatctt gcgcgtccca
     9721 cgcaaacggg cagtacacca gcggatactg caaacctttc gaggcgtgca tggtaacgat
     9781 tttgaccaaa tcttcgtcgc tttccagacg gatggcgcgg ttgtcgccgc tgttgttgcc
     9841 ggccaggctg atttggtcgc gcaaccattt gtgcagcgcg gcggggttgc ggttttgcgc
     9901 gtcttcggcg gcaagcagtt cgagcagttg gaaatagttg gtcaggctgc gcccgttgtt
     9961 ccggcttaag aggcgcgttt cgatgccgtg tgtttgggaa aattgctgca tagcggcgaa
    10021 aatgccgtat tgattccagt tgtcgagtgc ggttcgggca gattccgccc aatgcaaaat
    10081 ctcgctttcg ttttggttga agtcgtgcaa ttgctgcgcg tcataaccga atatgccgct
    10141 tgtcaggaca aagcgcagcg ttccggcgcg gcgcggttcg agccagaagc cgatgagtgc
    10201 ggacagggcg gcggcttcgg gcgaggcgaa cacggattcg cgcgaaagca ggacgctttg
    10261 cacctgtcgt tttttcaggg cggcggaaac catcaccgcc tcgttgtgcg tgcgtaccag
    10321 cacggcaata tcgcccgact gcaacgggca gcctttgaaa ttcagacggc ctccggcggc
    10381 ttcgttgagc gcgtgggcga tttcgtcggc gcaatagtcg gcggcacggc ggcgcaaaac
    10441 gtctttgttg gctttttcat tgtcgttttc gtgcagccaa cgaacctgta cggcaggacg
    10501 ttcgggggac aacctgcttt cggcacgcgc cgcaccgact tccgaatagc cgatgttttc
    10561 caaaacgaac gggcgttctt tgaggcggaa cagcgcgcct atgctgccga taagcgcggc
    10621 gtggctgcgg tagttggtgg cgagcgtgta gcggtgccgc gcatcttccg ccgcctgaag
    10681 gtaggcgtaa atgtccgcac cgcgaaagct gtaaatcgcc tgtttgggat cgccgaccag
    10741 aaacagcggg cggttttggg cgatgaagat tttttggaaa atttcgtatt gcagcgggtc
    10801 ggtgtcttgg aactcgtcga ttagcgcggt ttcccagttt tcggcaacgg cgcgggcgag
    10861 ggtttcggcg tgcggattgt cggtcagcgc ggtgtggaca tcgagcagca ggtcgtcgaa
    10921 accgcgttcg cggcgcgatt ttttcatctc ggcaaggctg cggttgaggt atccgattaa
    10981 atccagttgc agccggatta ttgttgcttc ttccgcttct tcgagtgcgt tcaaatcgta
    11041 cccgaagtct gccagtttct gcaattcggc aaatactgcc gcatcgggcg ttttgccttt
    11101 tttcagtccg gcttcgagtt tgtcggacgc aagtttcaag agtctgtcgt gcgtgtcttt
    11161 gtccagaaag ggcagttgtc cggcggcgga tttttgtgcc agttctttaa aaaggttgcc
    11221 gaagctgttt ttgcggtaac tgttgccgtt gaggtcggga tggatgcgcc aaaagccggc
    11281 ttccagctcg ggcagcaggc ggcagacggt ttgccatgag gtttcggcgt tgcgctgcgc
    11341 ctgtttcaaa tccgcctgcg gacggcggaa attcaggtac gggcgggaaa gatagcgcga
    11401 aatttgggca aggacggttt gcggcacagc tttgcgttta aacgccaatg cggcaagcac
    11461 cggatcattg ctgacgcgtt cccgccaaaa atcttgcgcc gggataagca ggcggtcgcc
    11521 gtcttcttcg gtcatttcga catcgaacgg tgcttggcac aggaaggcgt agtcgcgcag
    11581 gatgcgctgg cagaagccgt ggatggtata gatggcggcg ttgtcgaatt gcccgatggc
    11641 ggccttgagg cggacaatca gacgcgtccg gccctctttt tgcaaagcct gttttaagag
    11701 ttcgggcagg aaggtgtcgc cttcgtggtg ttcggcgcag taggcggcaa tgccgtctga
    11761 aagcgcgccg tctccaagtt cggcaatttc tttgctttct aaaacctgca acacatcgtc
    11821 caaacgcgcg cgcaggcgtg ttttcaactc ggcggtggcg gctttggtga aggtaacgac
    11881 caatacgcgc tcgacgtttt tttgttctaa tacgatcagg cgcgtaaaca gggcggcgat
    11941 gccgtaggtt ttgccggtgc cggcagaggc ctcaatcagg ttggtgccgg caatggggac
    12001 ggttagcggg tcgaatgctt ggatgcttgc agacatagtg cgtgctcgga aaacggttgg
    12061 acg
//
LOCUS       DAXHRP010000047        12048 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.047, whole genome shotgun sequence.
ACCESSION   DAXHRP010000047 DAXHRP010000000
VERSION     DAXHRP010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12048
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.047"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(140..1285)
                     /gene="dapE"
                     /locus_tag="ACFM72_000963"
     CDS             complement(140..1285)
                     /gene="dapE"
                     /locus_tag="ACFM72_000963"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HFC6257547.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARAAIAEICGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNAV"
     gene            complement(1398..2018)
                     /locus_tag="ACFM72_000964"
     CDS             complement(1398..2018)
                     /locus_tag="ACFM72_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HI_0552 family protein"
                     /protein_id="HFC6257548.1"
                     /translation="MLTPKSCDLFNIPFFQFSQLKKYRPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPITLPDYNRWLDNFDTEKYAAFDMWHGAESEYDDYRTVAQQNESDR
                     KLQNDEDFFCIGKHIERDDLGRQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(2052..2561)
                     /locus_tag="ACFM72_000965"
     CDS             complement(2052..2561)
                     /locus_tag="ACFM72_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC6257549.1"
                     /translation="MNPFETQSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQLVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGKMFIPKEKLTEIG
                     EIMAARRRR"
     gene            complement(2657..3208)
                     /gene="azu"
                     /locus_tag="ACFM72_000966"
     CDS             complement(2657..3208)
                     /gene="azu"
                     /locus_tag="ACFM72_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HFC6257550.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKTSMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEEASLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(3489..3911)
                     /locus_tag="ACFM72_000967"
     CDS             complement(3489..3911)
                     /locus_tag="ACFM72_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HFC6257551.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            4042..6792
                     /gene="secA"
                     /locus_tag="ACFM72_000968"
     CDS             4042..6792
                     /gene="secA"
                     /locus_tag="ACFM72_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HFC6257552.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTKMGLLAENDSLYSAANIALMHHLMAALRAHTLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMKEIR
                     FDVIGGLVDIYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNTIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            6936..8708
                     /gene="dnaG"
                     /locus_tag="ACFM72_000969"
     CDS             6936..8708
                     /gene="dnaG"
                     /locus_tag="ACFM72_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HFC6257553.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEVGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            8895..10823
                     /gene="rpoD"
                     /locus_tag="ACFM72_000970"
     CDS             8895..10823
                     /gene="rpoD"
                     /locus_tag="ACFM72_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HFC6257554.1"
                     /translation="MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            10970..11853
                     /locus_tag="ACFM72_000971"
                     /pseudo
     CDS             10970..11853
                     /locus_tag="ACFM72_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT         3192 a         3334 c         2980 g         2542 t
ORIGIN      
        1 ccctaaccct ctcccacggg agagggaatg gattgccgtt gaaataaatc gctctacata
       61 aaaaatcaat gtgttatctc aaacccacgt taggtctaag caaatggtcg gacatccgta
      121 tccggcaagc aagctgcttt cagacggcat ttccagccaa caaccgcgcc aatatcccct
      181 catacaccgc agacagcttc ggaatgtcgt ttagccgcac gttttcattg atttggtgga
      241 tggtcgcatt ggacgggcct aattcgatga gttcttttgc aatggctttg atgaagcgtc
      301 cgtccgaagt gccgccggtg gtggacaatt cggtctctac gccgcagatt tcggcaatgg
      361 cggcgcgtgc cacgtcggtc agtttgcccg cgtgggtcag gaagggctgc cccgaacacg
      421 accactgcaa atcgtattgc acaccgtgtt tgtccaaaat ggcgtggacg cgttgtttca
      481 gccctgcttc ggtggactcg gtggagaagc ggaaattgaa tttgacgctc agctcgcccg
      541 gaatgacatt ggtcgcgcct gtaccgccgt tgatattgga aatttgaaag ctggtcggcg
      601 ggaagtattt gttgccttcg tcccagactt cctgcgtcag ctctaacaag gccggggcaa
      661 aagtatgcac gggattgatt gccaaatgcg gataggcaat atggccttgc ttgcctttga
      721 cggtcaggtt gcccgacagc gagccgcgcc ggccgttttt aatcatatcg cccaatttgt
      781 ccacggctgt cggttcgccg acgatgcagt agtcgataag ctcgtcgcgc gctttcaata
      841 catcgacgac tttggtcgtg ccgtccaacg cgtcgccctc ttcgtcggaa gtaatcagaa
      901 gcgcaatgct gccttggtgg tcgggatgtt cggcaacgaa gcgttcacag gcggtaacga
      961 agcaggcgat gctggttttc atgtctgccg cgccgcgccc gtataatctt ccgtcgcgct
     1021 cggccggttc gaacgggggc gaatcccatt tttcgacagg acctgtcggt acaacgtcgg
     1081 tatgccctgc aaaacagacg acgggagctt tcgtgccgcg tcgcaaccag atgtttttgg
     1141 tgtcgccgaa atggagttct tcagccgcaa aaccgatttt gtgcaggcgt tcggcaagga
     1201 gtttttggca atccctgtcg tcaggggtaa cggatggtcg ggaaatcagc tctttggcaa
     1261 gctctaggga ttgagtttcg gtcatatttg ttcacttttg aaattagacc gtctgaaacg
     1321 ttctgaatgt gattttcaga cggcatttag gttaggttgg catacggggt gggtatttta
     1381 cccatcagtc ttctgaatca tttgccgtgg caggcttcgt aaagcggcag caaatcttcc
     1441 accgtttccg ctatccattt cgcgacatcc tgcctgccca aatcgtcgcg ttcgatgtgt
     1501 ttgccgatgc agaaaaagtc ttcgtcgttt tgcaactttc ggtcggactc gttttgttgc
     1561 gcgacggtgc ggtagtcgtc gtattcgctt tccgcgccgt gccacatatc gaatgcggcg
     1621 tatttttcag tgtcaaaatt atccagccat cggttgtaat cgggcagagt aatcggcgac
     1681 acgtcggctt tgtagcagtg ccaatccaag ctgacactca gacggcggcg gttaagtagt
     1741 atcgacagga tggcggcaga gtttttgtat tgggcgtatt tgaaataggc aaagaaatgg
     1801 gcgcgaacct gccagccgtt acaccagcgt tcgatgtgag gcggcgcaaa cggcgcaccc
     1861 aattcggcgg cgacctgctg aatcaactgc tgccatatct gccagttttc tttatagtca
     1921 gccttgattt gcggaatgct ttcaggccgg tattttttaa gctgggaaaa ttggaaaaac
     1981 gggatattga acaaatcgca acttttcggg gtcagcataa tatatccttg agacgattgt
     2041 ttcagacggc attatctgcg ccggcgcgcc gccatgattt cgccgatttc ggtcagtttc
     2101 tctttgggga tgaacatctt gcccatgtcg aacaagggtt cttcaatcgc caaatgcaca
     2161 tcatatcccg ccacaaaacg tttgaacgct tcctcatcgg ggacataagc gttgtctgct
     2221 tcgagtttgg caaattcggc ggaaacagcc gcccagttgt cgtgcagccc gatatgttgg
     2281 cgcaaaagct cgtccacgct ttcttgggct tgcggcgcat attgcagcag cagcgggaag
     2341 aagttttctt cttcgtcttc atggtgcagc ggcgcggcaa cgttgaaata ctgggcgatt
     2401 tggcggatgg tttgcaaaac aagctgattg cagccgtttt cggcgatgta gtccgacagc
     2461 atcgcgactt ggccgcaaaa acggcgtact ttgccgtggc aggcatacag catttcaatc
     2521 ggttcggcaa aggtaacgct ttgggtttca aacggattca tgttttcgtt ctcaacgggg
     2581 cacttttcaa gcagtcattt tataataaaa cagcctgcac aaagcaggct gtccgtcttt
     2641 tgagacttta agcggattaa tcgaccaaag tcactttgcc gttcatcaaa gcaccgtgac
     2701 ccgggaaggt gcaggcaaat ttgtattcgc cgtcagccag tttggcagga tccagagtca
     2761 gggaagcttc ttcgccgccg ccgatcagtt tggtatgggc aacaacgcgt gcatcatcag
     2821 gtttaacata atcggtatcg gcagcaccta cgccgtcttt aaatacgccg tccatatctt
     2881 cagctttggc aatcacgaga ttgtgaccca tgctggtttt gggttgcgta ccggtatgtt
     2941 tcagagtgat ggtgaactct ttacatgctt tgctgacttg gatgtctttg gtgttgaact
     3001 gcatattgtc gttggattcg acagttgccg cacagttgcc ggcagcaggg gcttcggcag
     3061 catctgcagg agcagcttcg gcggcaggcg cttcggaagc gggtgcttca gcagcaggag
     3121 ttgcctcggc agcaggcgcg gcaggttctt gagagcaggc agccaaaccg ataacggcgg
     3181 cagaaatcag agccagatac gctttcataa caaatctcca atcgataaaa taatattcgg
     3241 ttttacagaa atcaaagtgc aaccgccatt aacaaaacct tgaaaaagat tccgccgcgt
     3301 tgcacaaaca gatgtttcgg agcggcattt tgctacaaat ttcatttgaa atcaaagcct
     3361 gtctgcaagt ttacaatcgt ttactttaaa aggggcaatt ttaccccgaa cctatttctt
     3421 tagtattaga cccattatcc tttacttctt aatattaacg gatgtttaca caaattcccg
     3481 tatacatttt atgcgccatg ccttctaacc aagtttgcca atgcctccgc caattcggga
     3541 tgccgttttt ccaactttac cgccgccgaa ccgaaactct ccagcgcagc cttactcaaa
     3601 tgcagggtat tggttttcgg cggtttttcc ggtttcggga ccagcctgac cgaaacagag
     3661 cgtatcgaag cgtcaagccc tgccaactgc ggcaataccg acggtgcaat cattttcaag
     3721 cgcgatgccg ccatattgtt tgccgccaaa aggacaagcc tgccgtcttc gatacatgcc
     3781 gtctgaaaat gcgggtgcag gttggcaggc agcagttttt tcacggcggc atccaaccgc
     3841 cgccactgtc ccgcctgttt caaaagtccg gaaagcagcg cgtcccgcct gcccaactgt
     3901 tccaaattca taaaacatac acccaaaaag attgaaatac cgcaaacgcg cctttatttc
     3961 agacggcatt agcactttgc acaaacgctt gtgttaaaat cgcgttttcg cccactatta
     4021 tatcaggcgc aggaattatt catgctgaca aacattgcca agaaaatctt cggcagccgc
     4081 aacgaccgct tgctgaaaca ataccgtaaa tccgttgcca gaatcaacgc gctcgaagaa
     4141 cagatgcaag ccctaagcga tgctgatctg caagccaaaa ctgccgaatt caaacaacgc
     4201 ctcgccgacg gtcagacttt ggacggcatt ttgcccgaag ccttcgccgt ctgccgcgaa
     4261 gcgtcccgcc gcaccctcgg tatgcgccac ttcgacgtgc agcttatcgg cggtatggtg
     4321 ctgcacgacg gcaaaatcgc cgaaatgcgt accggcgaag gcaaaaccct ggtcgccacc
     4381 ctcgccgtct atctcaacgc gctggccggc aaaggcgtgc acgtcgttac cgtcaacgac
     4441 tacctcgcct cgcgcgacgc aggcattatg gagccgctct acaatttcct cggtctgacc
     4501 gtcggcgtga ttatttcaga tatgcagccg ttcgaccgtc aaaacgccta tgccgccgat
     4561 attacctacg gcaccaataa tgaattcggc ttcgactacc tgcgcgacaa tatggttacc
     4621 gaccaatacg acaaagtgca gcgcgaactg aatttcgccg tcgttgacga agtggactcc
     4681 atcttgattg acgaagcgcg cactccgctg attatctccg gccaggcaga cgacaacatt
     4741 cagttgtacc aaatcatgaa caccgttccg ccccacctcg tccgccaaga aaccgaagaa
     4801 ggcgaaggcg actactgggt agatgaaaag gcgcaccagg tcatcctgag cgaagcaggt
     4861 cacgaacacg ccgagcaaat cctaaccaaa atgggattgc tggcagaaaa cgactcgctc
     4921 tattccgccg ccaacatcgc cctgatgcac caccttatgg cggcattgcg cgcgcatacg
     4981 ttattccaca aagaccaaca ttacgttatc caagacggcg aaatcgtcat cgtggacgaa
     5041 ttcaccggcc ggctgatgtc cggccgccgc tggtcggagg gtctgcatca agccgtcgaa
     5101 gccaaagaag gcgtggaaat caaacgcgaa aaccaaaccc ttgcctccat caccttccaa
     5161 aactatttcc gcctgtacac caagctctcc ggcatgaccg gcacagccga taccgaagcc
     5221 ttcgagttcc aaagcatcta caacctcgaa accgtcatca tcccgaccaa ccgccctgta
     5281 cagcgcaaag acttcaacga ccagattttc cgttccgccg aagaaaaatt cgaagccgtc
     5341 gtcaaagaca tcgaagaatg ccacaaacgt gggcagcccg tcctcgtcgg tacgaccagc
     5401 atcgaaaact ccgaactggt ctcccacctt ctgcaaaaag ccggactgcc gcacaacgtc
     5461 ctcaacgcca aagaacacga acgcgaagcg ctgattgtcg cccaggcagg caaagtcggc
     5521 gcgattaccg ttgccaccaa tatggcggga cgcggtacgg acatcgtttt aggcggcaac
     5581 ctgaagcacc aaaccgatgc catccgtgcc gacgaaacct tgagcgacga agagaaacag
     5641 gcacaaatcg ccgcactcga aaacggctgg caggcagaac acgacaaggt tatggaagca
     5701 ggcggtttgc acatcatcgg cacagaacgc cacgaaagcc gccgtatcga caaccagttg
     5761 cgcggacgct ccggccgtca gggcgacccc ggatccagcc gtttctacct ctcgtttgaa
     5821 gacccgctgc tgcgcctatt cgcactcgac cgcgccgccg ccatcctcaa ccgccttgca
     5881 cccgaacgcg gcgtcgccat cgagcacaac ctgctgacgc gccaaatcga aggggcgcaa
     5941 cgcaaagtcg aaggcagaaa cttcgatatg cgcaaacagg ttctggaata cgacgacgtc
     6001 gccaacgagc aacgtaaagt catttacagc caacgcaacg aaattttaac cagcaaagac
     6061 atcagcgacc tgatgaagga aatccgtttt gatgtcatcg gcggacttgt agacatatat
     6121 atgccgccgg acagcatgga agaacaatgg gacattccga ctctggaaaa ccgtctggct
     6181 gccgaattca gactgcacga agacattcaa tcctggctga aagcagacaa tacaattgac
     6241 ggtcaagaca tcaaagagcg cctgatcgaa cgcatcgaaa acgaatatgc cgccaaaacc
     6301 gaactggtcg gtaagcaggc aatggccgat ttcgagcgca acgtgatgtt gcaggtcatc
     6361 gacaaccaat ggcgcgaaca cctcgccgct atggactacc tgcgacaagg catccacctt
     6421 cgcagctatg cccaaaaaaa tccgaagcag gaatataaac gtgaagcctt taccatgttc
     6481 caagacctgt ggaacggcat caaattccat attgcctccc tgcttacctc ggttcaaatc
     6541 gaacaaaacc ctgtcgcggt ggttgaagag caacccatcg gcaacatcca gtccatccat
     6601 tccgaatcgc ccgatatgga agaacttttg ggtcagtcgc aaaccgattt ggttaccgag
     6661 gcctttaatc ccgatggaac ggatttcagc cccgaagcct tggaagcgcg gggacaaatc
     6721 gtccaccgca acgacccctg cccctgcggc agcggtttga aatacaaaca atgccacggc
     6781 aaactggctt gagcgtttga acgcaaatgc cgtctgaaca tccggtttcc ggcttcagac
     6841 ggcattttgc ctgaaccgcc acatccgacc gccattccga aaaatcccga tttcgtaccg
     6901 tccaaactaa aaacaggcat ccgccccgcc gaactatgat tccatccgac ttcattgacg
     6961 aacttctggc caaaaccgat attgtcgaca tcatcgacga acaggttccg ctgaaaaaag
     7021 gcggggcgaa ctatatggcg tgttgcccgt tccacaagga aaaaacgccg tcgttttcgg
     7081 tcagtccgac caagcagttt taccactgtt tcagttgcgg ggcgcacggt tcggcgattg
     7141 gttttgtgat ggaacatcag gggctgtcgt ttccggaggc agtgcagttc cttgccgacc
     7201 gcgtgggtat gattgtgcct aaagtgcgcg ggcagaacga taatcccgaa gtccgtgccg
     7261 aacgtaagaa aaagcagcag acgctggaag aaacgacagc ggcggcggct gatttttatg
     7321 cgcaacagtt gaaattcaat ccgacggcga aggcttattt ggacaagcgc ggcttgagcg
     7381 cggaagtcat cgcgcattat ggtttgggct acgcgcccga cggctggcag cctttggcgc
     7441 aagtattcca accgtacccg aataccgcgt tggtggatac gggtatggtg attgacaatg
     7501 aggggcggta ttacgaccga ttccgtcatc ggattatgtt ccccatccgc aatccgcgcg
     7561 ggcaggtcat cggtttcggc ggcagggtgc tggacgactc caaacccaaa tatctaaact
     7621 ctcccgatac gcctttgttt gataagggga aaaaccttta cggattgtat gaagggcgtg
     7681 ctgctgtcaa ggaagtgggg cggattctgg tggtcgaagg ctatatggac gtggtcgcgc
     7741 tggcacagtt cggcgtgggc tacggcgtgg cggccttggg cacggcaaca acagcggaac
     7801 acgtcaaaat cctaatgcgt caggcggaca gtatttattt ctgtttcgac ggcgacagcg
     7861 cggggcgcaa agcggcttgg cgcgcgctgg aaaacgcgtt gccgcagttg aaagacgaca
     7921 aatcgctgca ttttttgttc ctgcccgagg aacacgaccc cgacagttac atccgtgcct
     7981 acggcaaagc gcaatttgaa gacgcgcttc tgaatcaaag caagcctttg tcggagtatt
     8041 tctgggaaca cctttcagac ggcattcatc tcaatacgca ggaaggcaag gcggaattgg
     8101 tgaaaaccag ttcgccgctt ttggcgcaga ttaccgcgcc ggcattggct tatttgttaa
     8161 aacaacggct tagcgaactg gtcggcatcg accccgacaa cctcgcgcaa ctgctaggac
     8221 aggaagcgcc gaagcggcac gtcaaacaaa aaaactacaa actgccgccg atttccgtca
     8281 aacagcccgt catgctgacg ctggtacagc ggcaaatccg cagcctcttg ataaatccgg
     8341 attgggctgc atatatagac ctgcccgatt atctggcgtt ggacggtgat ttcgcctgcc
     8401 ttgccaatct tgccgaatcg attaaaaacc atgccgccgt acccgaaacc gctcaggttt
     8461 tagagtatat gcgcggctcg ccttacgaag aaacgataac ccgaatcttc cattcaacgc
     8521 accaatcgga agaaatgaac agcagcagtg aagaagattg cgagaatttc caaatcggca
     8581 tgaaaaaact gctcaatgag ttaaaataca gccaaatcga agcattgaaa caaaaaagcc
     8641 tgcaatccgg cttaaatgaa agcgagaaaa aacttttgct gtcgttgctg accgcaaaac
     8701 aaaattgacc ggcggattcc gccacccgta aacccgttat gccgtctgaa aagcacttac
     8761 cccggctgca acaacgacac ctgcagaaca cccatcccaa aaagccttca gacggcatca
     8821 gagtacccgc tctgccacgc cttcaggtgc gttcaaacgc aaaccgtcgg caccttacca
     8881 acagaaagca gacaatgtcc agaaaccaaa atcacgaaga atatcaagac gacacccgtc
     8941 cgttaagcat tgaagagcaa cgcgcgcgcc tgcgtcagct catcatcatg ggtaaagaac
     9001 gcggctacat cacctactcc gaaatcaacg acgccctgcc agacgatatg tctgatgccg
     9061 accaaataga caatatcgtc agcatgattt ccggtttggg catccaagtt accgaacacg
     9121 cccccgatgc ggaagacata ttgttaagcg acaatgccgc cgttaccgac gatgatgccg
     9181 tcgaagaagc cgaggccgcc ctttccagtg cagattccga gttcggcaga accaccgacc
     9241 ccgtccgtat gtatatgcgc gaaatggggc aggtcgacct gctgacccgc gaagacgaaa
     9301 tcatcatcgc aaaaaaaatt gaaaacgccc tgaaaaatat ggttcaggcc atctccgcct
     9361 gcccgggatc cattgcggaa atcttagaac tcatcgaaaa aatccgcaaa gacgaaatcc
     9421 gcgtcgacga agtcgtagaa gccattatcg acccgaatga agtattgctc aacgaattgg
     9481 gcttggggca cttggaaacc acagcgcccg agaaaccttc caacgacaat tcggacgaaa
     9541 acgaagacga cgaagaatcg gaagaagatg cggatgaaat ctcggcagcc aatctcgccg
     9601 aattgaaaca aaaagtcatc ggccactttg cccaaatcga aaaagactac aaaaaaatga
     9661 ttggccgttt ggaaaaacac cacagccggc acaaagacta tctcgcctac cgcgacgcga
     9721 ttgccaacaa actgctggaa gtccgtttcg ccacccggca aatcgacagc ctcagcagca
     9781 gcctgcgcgg gaaagtagaa aacatccgca aactcgaacg cgaaatccgc gacatctgcc
     9841 tcgaccgcgt ccatatggaa cgcgactact tcatccaaaa cttcctgccc gaaatcacca
     9901 atctagaatg gattgaagaa gaaatcgcca aaggcagggt ttggagcgac gcgctcgacc
     9961 gcttccgcca cgccatcctc gaaaaacaaa ccgagttggc ggatatggaa aaagaaaccc
    10021 gcatttccat cgaagagttg aaagaaatca acaaaaatat ggtgtcgagc gaaaaagaaa
    10081 ccgcagccgc caaacaggaa atgattcagg caaacttgcg cctcgtgatt tccatcgcca
    10141 aaaaatatac caaccggggc ttacaattcc ttgatctgat tcaggaaggc aacatcggtt
    10201 tgatgaaagc ggtcgataag ttcgaatacc gcagaggcta taaattctcc acctacgcaa
    10261 cctggtggat ccgccaggca attacacgct cgattgccga tcaggcgcgt accatccgca
    10321 ttccggtaca tatgattgaa accatcaaca agatgaaccg catctcgcgc caacaccttc
    10381 aagaaaccgg cgaagaaccc gattccgcca aacttgccga actgatgcag atgcccgaag
    10441 acaaaatccg caaaatcatg aaaatcgcca aagagccgat ttcgatggaa acccccatcg
    10501 gcgacgacga cgattcgcac ttgggcgact tcatcgaaga tgccaacaat gttgcgccgg
    10561 ccgatgcggc aatgtacacc agcctgcacg aagtaaccaa agaaatcctc gaaagcctga
    10621 caccgcgtga ggcaaaagtc ctgcgtatgc gtttcggcat cgatatgaac accgaccaca
    10681 cgctggaaga agtcggcaga cagtttgacg taacgcgcga acgcatccga caaatcgagg
    10741 caaaagcact ccgcaagctg cggcatccga caagaagcga ccgtttgaga agtttcttgg
    10801 acagcgaaga cagcaagctg taaaccaaaa aaccgcaggt ttcaaatacc tgcggttttt
    10861 tcttacacaa taaacaacgc ttccacatat cccacactcc tatcccgaga cctttgcaaa
    10921 atcccccaaa atctcctaaa ttcccaccaa gacatttagg agatttctca tgagcacctt
    10981 cttccggcaa accgcacaag ccatgattgc caaacacatc gaccgcttcc cactattgaa
    11041 gttggaccag gtgattgatt ggcagccgat cgaacaatac ctgaaccgtc aaagaacccg
    11101 ttacctcaga gaccaccgcg gtcgtcctgc ctatcccctg ctgtccatgt tcaaagccgt
    11161 tctgctcgga caatggcaca gcctctccga tcccgaactc gaacacagcc tcatcacccg
    11221 catcgacttc aacctgtttt gacgttttga cgaactgagc atccccgatt acagcacctt
    11281 atgccgctac cgcaaccggc gacgcaagac gacaccctgt ccgaattgcc ggaactgatc
    11341 aaccgccaac tgaccgaaaa aaacctaaaa atagagaaag catccgccgc cgtcgttgac
    11401 gccaccatta ttcagaccgc cggcagcaaa cagcgtcagg ccatagaagt cgatgaagaa
    11461 ggacaagtca gcggccaaac cacaccgagt aaagacagcg atgcccgttg gacaaagaaa
    11521 aacggcctct acagactcgg ttacaaacaa catacccgta ccgatgcgga aggctatatc
    11581 gagaaactgc acatcacccc agccaatacc catgagtgca accacctgtt gcctttgctg
    11641 gaaggcatta ccgaaggcac gaccatctat gccgacaaag gctatgacag tgcggaaaac
    11701 cgaacatctg gaagaacatc agttgttaga cggcattatg cgcgggcagc ctatttcgga
    11761 ctgattaaag tgagtgcgca aagccacctg aaggcgatgt gtttgaacct gttgaaagcg
    11821 gccaacaggc taagtgcgcc cgctgccgcc taaaaggcag cccggatgcc tgattatcgg
    11881 gtatccgggg aggattaagg gggtatttgg gtagaattag gcggtatttg gggcgaaaac
    11941 agctgaaaac ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt gcaaaggtct
    12001 catcctgtta ttttcacaaa aacagaaaac caaaaacagc aacctgaa
//
LOCUS       DAXHRP010000048        11636 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.048, whole genome shotgun sequence.
ACCESSION   DAXHRP010000048 DAXHRP010000000
VERSION     DAXHRP010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11636
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.048"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(339..761)
                     /locus_tag="ACFM72_000972"
     CDS             complement(339..761)
                     /locus_tag="ACFM72_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HFC6257555.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(879..1550)
                     /locus_tag="ACFM72_000973"
     CDS             complement(879..1550)
                     /locus_tag="ACFM72_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HFC6257556.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDAVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QAAKP"
     gene            complement(1566..2192)
                     /gene="purN"
                     /locus_tag="ACFM72_000974"
     CDS             complement(1566..2192)
                     /gene="purN"
                     /locus_tag="ACFM72_000974"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HFC6257557.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIHNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFTSRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCARYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGVVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2299..3117)
                     /locus_tag="ACFM72_000975"
     CDS             complement(2299..3117)
                     /locus_tag="ACFM72_000975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC6257558.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3376..3816)
                     /locus_tag="ACFM72_000976"
     CDS             complement(3376..3816)
                     /locus_tag="ACFM72_000976"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HFC6257559.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSEPSVLLACGGNLPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEELADSRERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3879..5285)
                     /locus_tag="ACFM72_000977"
     CDS             complement(3879..5285)
                     /locus_tag="ACFM72_000977"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HFC6257560.1"
                     /translation="MKFSTKAETLQAQQTGAQLFVCAEASQLSNPTALALFASLEEGQ
                     NFADTKIPTDNGLQAIAVARLAKTDRAALNKAAAEAAKWAQNQETVNVDVHVFEEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLVDSLLVASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEDYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5272..5442
                     /locus_tag="ACFM72_000978"
     CDS             5272..5442
                     /locus_tag="ACFM72_000978"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257561.1"
                     /translation="MLNFTFILLIGTVVGCSDGLSLKRPSEDGWHDCTPFEAPSETLR
                     GQSACAEPLTAP"
     gene            5453..6568
                     /gene="lptF"
                     /locus_tag="ACFM72_000979"
     CDS             5453..6568
                     /gene="lptF"
                     /locus_tag="ACFM72_000979"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HFC6257562.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6565..7635
                     /gene="lptG"
                     /locus_tag="ACFM72_000980"
     CDS             6565..7635
                     /gene="lptG"
                     /locus_tag="ACFM72_000980"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HFC6257563.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7845..10430
                     /gene="acnB"
                     /locus_tag="ACFM72_000981"
     CDS             7845..10430
                     /gene="acnB"
                     /locus_tag="ACFM72_000981"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HFC6257564.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLASIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10572..11567
                     /locus_tag="ACFM72_000982"
     CDS             10572..11567
                     /locus_tag="ACFM72_000982"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HFC6257565.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEIFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         2677 a         3235 c         3034 g         2690 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactataatt caataaatta atatatggct taaaataacg
       61 ggattctcgc ctcccgcccg cccgcagaag caggcgggta tcattttaaa acgcggcatt
      121 taaaatttga ccgaaaattg ttgacaatcc ggaatcaagt ctgcacaata ccccgacaag
      181 tccaagtatt ataaaggctg aataaagagg aaacagcagg cagatatatt cgggaggtgc
      241 agtccgaata tatctgcttt tttatgcgcc tccggattgc ctgccgcacc tttcccttca
      301 gacggtatca gccgtttccc cataatgccg cccgatgcct atttatctgc cccggcaatt
      361 tcaaaactgt gggtaatctt tgccgctttg cccaacataa tcgaagccga acagtatttt
      421 tcggcagaca tctgaacggc gcgctcaatg gccgattctt tcaaatcatg cccgaatact
      481 ttgaaatgga tgtggatttc ggtaaacacg cgcggcgcat cgtccgcccg tttcgccgta
      541 accgtcgcac ggcagtcagt cactttctga cgctgttttt cggcaatcat caccacatcg
      601 atgctcgaac agcccgccac gcccaacagc agcatttcca aagggctggg cccgcgcttg
      661 gccgcacctt ctgccgccga cccctccata acgacgctgt gcccgccttc cgtcgtgccg
      721 acaaaacaca tcccgtctat ccattttgat gtaacctgca tggtgtcatt cctgaaaata
      781 gcgttaaaac cgctttgcat atggcgttat tgtaaacaat ttcaagcggc ttatgcagaa
      841 atatggacaa aacggcaaaa aaacacttga aaaccgattt acggtttggc tgcctggccg
      901 ttgatctgca ccgatttgag tttcagcgta taggttttgc cgtcgtcggt atagccgatt
      961 tgtgccggaa tattgttcag ggacggtgcg aagaaataca ttaccgcatc gtcgccgcgc
     1021 cgcacccgat atttgacgac ttcggtttcc acgccgccta tgctgtattt tcctgtaccc
     1081 gccttattca aaccgccgac ggaataaagt tttttgccgt tggtgatttt cagccccggg
     1141 gggagtttcg cgtcatttgc cgccaactgc caggcaagcg tgaacaaatc catagccttg
     1201 gggctttgct cggttttgct ctcgcccgct ttgccgtaag ttacgctgcc gtcggcgaat
     1261 ttggcttccg catacagttt gcccctgcgt atgtctctat agtaggtagg gtgcagggta
     1321 ttgccgacaa ccgtaccgcc ggactcgaaa cggatattgt atagcggcac tttaatcgtc
     1381 gaaacgattt tgtaagcatt gccgctgcgt tcaaatgtca tcgtggcggg aatgccgtag
     1441 ctgccggaat agtgcagcac ggcggattgg ggcagccctg ccgcatacgc gcacggcagg
     1501 gcggcggaca aaatggcggc ggaaaatata tttttaaaag tcttcatcat ttgctcccgc
     1561 ccggtttacg ccgtcagaaa acgggcggca tcggcgtttt ccgaatttct gacgcggttt
     1621 ccctcaataa tcaggcggcc ggcggcaaaa tcggcaacgg ctttcggata aagtttatgc
     1681 tcgacagcca aaacccgtgc ggcaatatcg tctgccgtat cgccgtcgag tatcggcaca
     1741 accccttgcg atacaatcgg gccgcaatcc agttcggcag taacgaaatg gatggtgcag
     1801 ccggcaacgc ggcagcccgc ctccaaagcg cgttcgtgcg tatgaagtcc ggtaaacgag
     1861 ggaaggatgg acgggtgaat gttcatcagc ctgccttcgt aacgggcgca aaactcgggg
     1921 gtcagaatcc gcataaaacc tgccaaaacc accaagtcgg gttgatatgc gtcgattttc
     1981 tccatcatgg cggtatcgaa ggcaagccgg gatgtaaagt ttttatgatt caggctatcg
     2041 gtcgggatgc cgcgttcggc cgcccattgc aaaccggcag ccgtttcgct gttgctcaac
     2101 acggcggcaa tgcggacgtt gtgaatggcg gcattgacga ttgcctgcat attgctgccg
     2161 cgtccagaaa tcaggatgac gatgtttttc ataatggtgc gcttttgaaa gggatgccgt
     2221 ctgaaccgct gtttggtggt ttcagacggc atttgccgta aaaatgcccg aaaacctgtt
     2281 tcgggcatgg attcggactt aatttacttt tttgatgtcg acttgagccg gctgcttggc
     2341 gggcgcgttt tcgggtgcgc cgattttgac cagtttcaca tcaaatacca aagtggcgtt
     2401 cggaccgatt ttgtcgcccg caccctgttc gcggtaggca aggttggacg ggatgtagaa
     2461 cgtggcttcg ccgccttctt tcagaagctg tacgccttcg gtccaacccg gaatcacttg
     2521 gctcaaaggg aaggtgaccg ggccgccgtt ggctttgctg ctgtcgaata ccgtaccgtc
     2581 aatcaggcgg ccttcgtatt ccacggtaac gatgtcgtct ttggtcggct gtttgccttc
     2641 gccctgtttg gtgattttgt attgcaggcc ggaagcagtg gtcttcacgc cgtctttggc
     2701 ggcattttct ttcagaaagg cttcgccttt ttctttattg gccttcgcgt ccgccttgtg
     2761 tttttctacg gctttagcct gttgttcctg aaggaatttc atcatgactt cctgagcctg
     2821 ctcctcggtc attttgattt ctttgccgtc atacactgcc tgcatggctt cggtaaagac
     2881 tttcaaatcg atttccgcgc cctgttcctt catttgcttc agggagcgtc cgatgtccac
     2941 gcccatcgca tagcttgcct gctgcatcgt gctgccgatc gaagaggtgt cgccctgcgc
     3001 ggaagaagcg gcggcaggtt cggatgcaga tgcgggggcg gcttcttttt tgccgcaggc
     3061 ggaaagtgcc aaagcggcgg aaagggtcag tgcgctgatt ttgaaaatgg tgttcatgat
     3121 ggatcttcgc tgtcgataag gtcggaaaaa cgggattata gccgagtttg aatgtttcaa
     3181 cacacaggat gacacataaa gcgtcaatcg tgtgttgccc tgttttggaa gggattgaac
     3241 cttccaaaat aagttttgat tctaccgccc cgagggacag atgtccaagt ggcggggttc
     3301 aaccgataag gaaattttaa tcaaatagaa tcaagcctgt ttaaattttg taaatgcggc
     3361 atttcagacg gcattttatg ccttgccctc catgccgtga tgttcgatgg caaaaccgct
     3421 tcggcggtag gcggtaaagc gttcgcgcga gtcggcgagc tcttccaagc tgttgccgac
     3481 gatttccaaa acgcgcgcgg gcaagaccgg agcggtgttc caaaaaccgt cggacaggtt
     3541 caaaacggtc atgccttcgg gaattcgggg cagattgccg ccgcaggcaa gcaggacgga
     3601 tggttcagac ggcatggctt cttccgtttc ccaaatttcg tgcggaatga aactctcggc
     3661 ctcgtattgc caaagcattt tgtccaattc ctgaagctgc ccgaacgaat cggaccacac
     3721 cagtatcctg ccgccgtccc gaatcgcacg ggcaatcagg cggcaggtga aaatcggaac
     3781 ttgggcaacg tgcgtgtaaa aggtggcttt cggcatattg tttgaacatt tggcaggata
     3841 atgccgtctg aaaggcttca gacggcattg tggcaaaatt aaagattccg cagatagttc
     3901 agcagcaagg gaacgggacg gccggtcgca cctttttccg caccggattt ccacgccgta
     3961 cccgcgatgt caaggtgtgc ccatggatag tcttcggtaa agtaggatag gaatgttgcg
     4021 gcggtaatcg tgcccgcgcc gggcgtgccg atattgggga tgtcggcaaa gttggatttg
     4081 agctggtctt tgtaggtttc aaagagcggc agttgccacg ctttgtcgtc cacgttgtag
     4141 gaagcgacaa gcaggctgtc gaccaaatct tgattgttgc ccatcacgcc gctgacatcg
     4201 tgccccaagg cgacgatgca tgcaccggtc agggtggcga cgtcgatgac ggctttgggt
     4261 ttgaactgct cggcgtaagt gagcgcgtcg cacaaaatca gacggccttc ggcatcggtg
     4321 ttcaacactt cgatggtcag acctttcata cttttcacga catcgcccgg tttgttggcc
     4381 gcgccggaag gcatattttc acaagtggcg acgacggcaa tcaggttaat cggcagttgc
     4441 agtttgacgg cggcgcagaa ggtgctgatg acggttgccg cgccgcacat atcaaacttc
     4501 atttcgtcca tgttcaggcc gggtttgagg gagatgccgc cggtgtcgaa ggtaatgcct
     4561 ttgccgacca ataccacagg cgcggcttct ttgtcggccg caccaaaata gctcagctcg
     4621 accaaatagg gggcttccgc gctgcctttg gcgaccgacc agaatgaacc catgttttct
     4681 ttaatgtagt ctttttcgat gattttggcg tgtgcgccca gtttttcggc ttcggctttg
     4741 gcggtgcgcg ctaaaaattc gggcgtgcat tcgttgggcg cggcgttgcc caagtcgcgg
     4801 cagaggcttt gtccgtaaac ctgcgcttcg gcgacgcgca aggcttcttt aacggcggct
     4861 tcgtgtgcgc tgtggaacac ggcagtttca aatttggcgg gcttggcttc ttttttgtag
     4921 cggtcgaaac ggtaggcggc attgccgaac gcaatcgcaa acgcttcggc aacggctgca
     4981 gcctgcgctt cttcaaagac gtgaacgtcc acattgaccg tttcctgatt ttgcgcccat
     5041 ttggcggctt cggcagcagc tttgttcagc gcggcacggt cggttttagc gaggcgggcg
     5101 acggcaatgg cttgcaaacc gttgtccgtc gggattttgg tgtcggcgaa attttgacct
     5161 tcttcaaggg aagcaaagag ggcgagggca gtcgggttgc tcagttgcga tgcttcggcg
     5221 cagacaaata attgcgcacc tgtctgttga gcctgcaaag tttcggcttt tgtgctaaat
     5281 ttcacgttta ttctcctgat tggaacggtt gtcggttgtt cagacggcct ttcgctcaaa
     5341 agaccgtctg aagacggctg gcacgattgt accccatttg aagcaccgtc tgaaaccttg
     5401 cgcggacaat ccgcctgcgc cgaaccgctt accgccccct gaccgcgatt ctatgattta
     5461 tcaaagaaac ctcatcaaag aactctcttt taccgccgtc ggcattttcg tcgtcctctt
     5521 ggcggtattg gtctccacgc aggcaatcaa cctgctcggc cgtgccgccg acgggcgtgt
     5581 cgccatcgat gccgtgttgg cattggtcgg cttctgggtc atcggtatga cgccgctttt
     5641 gctggtgttg accgcattta tcagtacatt gaccgtgttg acccgctact ggcgcgacag
     5701 cgaaatgtcg gtctggctat cctgcggatt ggcattgaaa caatggatac gcccggtgat
     5761 gcagtttgcc gtgccgtttg ccgttttggt tgccgtcatg cagctttggg tgataccgtg
     5821 ggcagagcta cgcagccgcg aatacgctga aatcctgaag cagaagcagg aattgtcttt
     5881 ggtggaggca ggcgggttca acagtttggg caagcgcaac ggcagggttt attttgtcga
     5941 aaccttcgat accgaatccg gcatcatgaa aaacctgttc ctgcgcgaac aggacaaaaa
     6001 cggcggcgac aacatcatct tcgccaaaga aggtaacttc tcgctgaacg acaacaaacg
     6061 cacgctcgaa ttgcgccacg gctaccgtta cagcggcacg cccggacgcg ccgactacaa
     6121 tcaggtttcc ttccaaaaac tcaacctgat tatcagcacc acgccaaaac tcatcgaccc
     6181 cgtttcccac cgccgtacca ttccgaccgc ccaactgatt ggcagcagca acccgcaaca
     6241 tcaggcggaa ttgatgtggc gcatctcgct gaccgtcagc gtcctcctac tctgcctgct
     6301 tgccgtgccg ctttcctatt tcaacccgcg cagcggacat acctacaata tcttgattgc
     6361 catcggtttg tttttaattt accaaaacgg gctgaccctg ctttttgaag ccgtggaaga
     6421 cggcaaaatc catttttggc tcggactgct gcctatgcac atcatcatgt tcgtcatcgc
     6481 aatcgtactt ctgcgcgtcc gcagcatgcc cagccagccc ttctggcagg cggttggcaa
     6541 aagtctgaca ttgaaaggcg gaaaatgaac ctgatttcac gttacatcat ccgtcaaatg
     6601 gcggttatgg cggtttacgc gctccttgcc ttcctcgctt tgtacagctt ttttgaaatc
     6661 ctgtacgaaa ccggcaacct cggcaaaggc agttacggca tatgggaaat gctgggctac
     6721 accgccctca aaatgcccgc ccgcgcctac gaactgatgc ccctcgccgt ccttatcggc
     6781 ggactggtct ctctcagcca gcttgccgcc ggcagcgaac tgaccgtcat caaagccagc
     6841 ggcatgagca ccaaaaagct gctgttgatt ctgtcgcagt tcggttttat ttttgctatt
     6901 gccaccgtcg cgctcggcga atgggttgcg cccacactga gccaaaaagc cgaaaacatc
     6961 aaagccgccg ccatcaacgg caaaatcagc accggcaata ccggcctttg gctgaaagaa
     7021 aaaaacagca ttatcaatgt gcgcgaaatg ttgcccgacc atacgctttt gggcatcaaa
     7081 atttgggcgc gcaacgataa aaacgaattg gcagaggcag tggaagccga ttccgccgtt
     7141 ttgaacagcg acggcagttg gcagttgaaa aacatccgcc gcagcacgct tggcgaagac
     7201 aaagtcgagg tctctattgc ggctgaagaa aactggccga tttccgtcaa acgcaacctg
     7261 atggacgtat tgctcgtcaa acccgaccaa atgtccgtcg gcgaactgac cacctacatc
     7321 cgccacctcc aaaacaacag ccaaaacacc cgaatctacg ccatcgcatg gtggcgcaaa
     7381 ttggtttacc ccgccgcagc ctgggtgatg gcgctcgtcg cctttgcctt taccccgcaa
     7441 accacccgcc acggcaatat gggcttaaaa ctcttcggcg gcatctgtct cggattgctg
     7501 ttccaccttg ccggacggct cttcgggttt accagccaac tctacggcat cccgcccttc
     7561 ctcgccggcg cactacctac catagccttc gccttgctcg ccgtttggct gatacgcaaa
     7621 caggaaaaac gttgaaccaa tgccgtctga acctctcttc agacggcatt tgttttcatt
     7681 gacacattcc cacagacaga tagccgttcc ctattacatt acctgtcata acagttccat
     7741 ttttgttaaa actagtctat gatagcggta caaatattgt ttacaatatt taacgcaaat
     7801 catttgcaac ccgacaaaag aaaaacagaa aaaggaacaa agagatgtta gaagcctatc
     7861 gtaaagccgc cgccgagcgc gccgccctcg gcattcccgc cctccctttg aacgcgcagc
     7921 aaaccgccga tttggttgag ctgctgaaaa gcccgcccgc aggcgaaggc gagttcttgg
     7981 tcgaactgct tgcccaccgt gttccgcccg gtgtggacga tgccgccaaa gtcaaagcct
     8041 cattcctggc tgccgttgcc gaaggcagcg cgtccagccc gctgatctcc cccgaatatg
     8101 cgaccgaact cttaggtaca atgctcggcg gttacaatat tcacgcctta atcgaactct
     8161 tggacgacga caaactcgcg tccattgctg ccaaaggctt gaaacatacg cttctgatgt
     8221 tcgattcctt ccacgacgtt caagaaaaag ccgaaaaagg caacaaatac gcgcaagaag
     8281 ttttgcaatc ttgggcagat gccgaatggt tcgcctcacg cgccaaagtt cccgaaaaaa
     8341 tcaccgttac cgttttcaaa gttgacggcg aaaccaatac agacgacctc tcccccgcgc
     8401 ccgacgcgtg gagtcgtccc gatattccgc tgcacgcgct ggccatgctg aaaaacccgc
     8461 gcgacggcat cacgcccgac aaaccgggcg aagtcggtcc gattaaattg ttggaagaac
     8521 tcaaagccaa aggccatccg gttgcttacg tcggcgacgt ggtcggtact ggttcttcac
     8581 gcaaatccgc gaccaactcc gtcatttggc ataccggcga agacattccg ttcgtgccga
     8641 acaaacgctt cggcggcgta tgtttgggcg gcaaaatcgc gccgattttc ttcaataccc
     8701 aagaagattc cggcgcgctg ccgattgaag tcgatgtatc tgctctaaaa atgggcgatg
     8761 tcgtcgatat cctgccttat gaaggcaaaa tcgtgaaaaa cggcgagact gttgccgagt
     8821 ttgaattgaa atcacaagta ttgctggacg aagtgcaagc cggcggccgt atcaacctga
     8881 ttatcggccg aggtctgacc gccaaagcgc gcgaagccct gaaactgcct gcctctactg
     8941 cattccgcct gccgcaagcg cctgccgaaa gcaaagccgg tttcaccttg gcgcaaaaaa
     9001 tggtcggccg cgcctgcggt ctgcccgaag gacaaggcgt gcgcccgggt acttactgcg
     9061 aaccgcgtat gacgacggtc ggctcgcaag acacgaccgg cccgatgacc cgcgacgagt
     9121 tgaaagactt ggcttgtttg ggcttctccg ccgatatggt gatgcagtct ttctgccaca
     9181 ccgccgccta tccgaaacct gtcgatgtaa aaacccataa agaactgccc gcctttattt
     9241 ccacccgtgg cggcgtgtca ctgcgtccgg gcgacggcgt catccactcg tggctcaacc
     9301 gcctgctgct gcccgatacc gtcggcaccg gcggcgacag ccatacccgt ttccccatcg
     9361 gtatttcctt ccccgccggc tccggcttgg ttgcctttgc cgccgcaacg ggcgtaatgc
     9421 cgctcgatat gcccgagtct gtattggtac gcttcagcgg caagctgcaa ccgggcgtaa
     9481 ccctgcgcga tttggtgaac gccatcccgc tgtacgcaat caaacaaggt ttgctgaccg
     9541 ttgccaaagc cggtaagaaa aacatcttct ccggccgcat cctcgaaatc gaaggcctgc
     9601 ctgatttgaa agtggaacaa gcctttgaat tgaccgacgc atccgccgaa cgctccgccg
     9661 ccggctgtac cgtgaagctc aacaaagagc cgattatcga gtacatgaaa tccaacgtcg
     9721 tgttgatgaa aaacatgatt gccaacggct atcaagaccc gcgcactttg gaacgccgca
     9781 tcaaagctat ggaaaaatgg ctggcaaatc ccgagttgct cgaagcggat aaagatgccg
     9841 aatacgccgc cgtgattgaa atcaacatgg acgacatcaa agagccgatt atcgcctgcc
     9901 cgaacgaccc ggacgacgtg tgcttcatgt ccgaacgctc cggcaccaaa atcgacgaag
     9961 tattcatcgg ttcgtgtatg accaacatcg gccacttccg cgccgcctcc aaacttttgg
    10021 aaggcaaggc agacaccccc gtccgcctgt ggattgcgcc gccgaccaaa atggacgcga
    10081 aacaattgtc cgacgaagga cactacggcg tactcggacg tgccggcgcg cgtatggaaa
    10141 tgccgggttg ctccttatgt atgggtaatc aggcgcaagt acgcgaaggt gcgaccgtta
    10201 tgtccacctc cacccgcaac ttcccgaacc gtttgggtaa aaacaccttt gtttacctcg
    10261 gttcggcgga attggcagcg atttgctcca aactgggtaa aatcccgacc gttgaagaat
    10321 atcaagccaa tatcggcatc atcaacgaac agggcgataa aatctaccgc tatatgaact
    10381 tcaacgaaat cgacagctac aacgaagtag ccgagaccgt gaacgtttaa tccccgtcat
    10441 ccgtatgaag taagggattg accgcaatgc cgtctgaaca accttcagac ggcattgcaa
    10501 cattccgcta acccttcttt ccgcaaacgc tgcaaatacg gcgttcacgc ccccacataa
    10561 aggaaacgac agtgaacctg aaaaaccgcc attttctgaa acttttagac ttcacgccgg
    10621 aagaaatcac cgcctacctc gaccttgccg ccgaattgaa agccgccaaa aaagcagggc
    10681 gcgagattca gcggatgaaa gggaaaaaca tcgccctgat ttttgaaaaa acctctactc
    10741 ggacgcgctg cgcgtttgaa gtcgccgcgc gcgatcaagg cgcgggagtg acttatttag
    10801 agccgtccgc cagccaaatc gggcataagg aaagcatcaa agacaccgcc cgcgtgttgg
    10861 gcaggatgta cgatgccatc gaatatcgcg gtttcggtca ggaagttgtt gaagaattgg
    10921 cgaaatacgc gggcgtaccc gtgttcaacg ggctgaccaa cgagttccat cccacacaaa
    10981 tgcttgccga cgcactgact atgcgcgaac acagcggcaa acctttgaac caaaccgcgt
    11041 ttgcctacgt cggcgacgcg cgttacaaca tgggcaattc cctgctgatt ttaggggcaa
    11101 aattggggat ggacgtgcgt atcggcgcac cgcaaagcct gtggccgtct gaaggcatta
    11161 ttgccgccgc acacgccgcc gccaaagaaa ccggcgcaaa aattaccctg accgaaaacg
    11221 cgcatgaagc cgtgaagaat gttgatttta ttcataccga tgtgtgggtc agcatgggcg
    11281 agccgaaaga agtctggcag gaacgcatcg atttgctgaa agattaccgc gttacgcccg
    11341 aactgatggc ggcatcgggc aatccgcaag tcaaattcat gcactgcctg cccgccttcc
    11401 acaaccgcga aaccaaagtc ggcgaatgga tttacgaaac cttcgggctg aacggtgtgg
    11461 aagttacaga agaaatattc gaaagccccg ccagcatcgt gttcgatcag gcggaaaacc
    11521 gtatgcacac gattaaagcg gtaatggtcg cggctctggg cgactgacag aactgtgcct
    11581 gtttaaattc atccgcaaca cagataccgt ctgaacacga tgttcagacg gtatcc
//
LOCUS       DAXHRP010000049        11611 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.049, whole genome shotgun sequence.
ACCESSION   DAXHRP010000049 DAXHRP010000000
VERSION     DAXHRP010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11611
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.049"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(175..867)
                     /locus_tag="ACFM72_000983"
     CDS             complement(175..867)
                     /locus_tag="ACFM72_000983"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC6257566.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGAPKYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(975..2168)
                     /locus_tag="ACFM72_000984"
     CDS             complement(975..2168)
                     /locus_tag="ACFM72_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC6257567.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACFM72_000985"
     CDS             complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACFM72_000985"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HFC6257568.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3021..3950)
                     /locus_tag="ACFM72_000986"
     CDS             complement(3021..3950)
                     /locus_tag="ACFM72_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HFC6257569.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQVYLNQIRRITHEAG"
     gene            complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACFM72_000987"
     CDS             complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACFM72_000987"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HFC6257570.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4778..6985
                     /gene="uvrD"
                     /locus_tag="ACFM72_000988"
     CDS             4778..6985
                     /gene="uvrD"
                     /locus_tag="ACFM72_000988"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HFC6257571.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQLSLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFEILPENISDDPAFPILAFLSNATLESGENQAGVGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKPAYDSYGNTRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEEM"
     gene            7342..7881
                     /locus_tag="ACFM72_000989"
     CDS             7342..7881
                     /locus_tag="ACFM72_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC6257572.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAENHVQICEVSGIGFEKEGSLCGETGQK
                     LWLEEWEYPPIGVYFANDPSGGHAMFALDYRACGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8071..8286)
                     /locus_tag="ACFM72_000990"
     CDS             complement(8071..8286)
                     /locus_tag="ACFM72_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257573.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8410..8769)
                     /locus_tag="ACFM72_000991"
     CDS             complement(8410..8769)
                     /locus_tag="ACFM72_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC6257574.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8822..9198
                     /locus_tag="ACFM72_000992"
                     /pseudo
     CDS             8822..9198
                     /locus_tag="ACFM72_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            9397..10017
                     /locus_tag="ACFM72_000993"
     CDS             9397..10017
                     /locus_tag="ACFM72_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HFC6257575.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10040..11491
                     /locus_tag="ACFM72_000994"
     CDS             10040..11491
                     /locus_tag="ACFM72_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HFC6257576.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
BASE COUNT         2848 a         3074 c         2837 g         2852 t
ORIGIN      
        1 cctctttcag ttacagcagc ttgatccctt tcccttatcc aacgggggaa ggctaggata
       61 gggtggcttg caaatataca gaacaaggga caagagccac cctctctcca accctctccc
      121 tccgtacggg agggggtgga ttctcgcggg cgaagcccac gctacggtta gcctttaccc
      181 cagcacaaac aattcccgcc cgtgcgcctt cagccaactt ttagcattgt cggtatgcgg
      241 cgtcagcgtg ttcaccaaat gccaaaagcg cggactgtgg tcggggtggc ggaggtggca
      301 gagttcgtgg atgcagacat agtcggcaac gtacttgggc gcgccgatca gccgccagtt
      361 gaggcggatg ccggtgtgcg ggcggcatac gccccaaaag gttttggcgt tgctcaggtc
      421 tgtggcggtg ggcgtcagtc ctgtttcggc tgcgtgtttt tcaaggcggg gcagcaggta
      481 ttcgcgggcg cgttcgttca acaggcggcg caggtggtcg atttgtgcgg cggtttcttt
      541 tcggggaagc aggatttcag acgacgtgat acggatatgg ctttggctgt gggtatccag
      601 cttggtcttt attccccgat accaaatcca ctcgggtaag tttgggtggg aaacaggatg
      661 cacgggcgtt ttggcaagcg tgttccgcaa aatcgtttcg tttgccgcca gccagtttgc
      721 taacgcgtgg tcttgaaaaa agggtgggac gttgatgctg accgtctgca tattgacggg
      781 gcgcagaatc agatttttct tggcactgcg tttgagttcg atttcgatgc acaaaccgtc
      841 ggaaagagta taggtgaagc gtttcatagt tgtgaatagg tttcagaccg gatacatcgt
      901 ctgaaacagg aattttccat atcaggcggc aaacttcgga taatatacaa aatcaaacat
      961 ctgcgctaca aggttcagcc gaacaagccg ccgatatatt tgctgatggt aatggcgctg
     1021 agtactgcca tcaaaccgac cacaatcacg ccggaaacgg tgagccacag cgggtgtttg
     1081 tagtcgccga caattttggt tttgtaggcg gcaatcagaa tcagaccgag ggaaatcggt
     1141 aaaatcaggc cgtttaatgc gcctacgaac accagcacct gcgccggttt gccgatggtg
     1201 gaaaatacgg cggtggacac ggcgataaag gcaataatcc atttgttttt attgcgttcg
     1261 atagacgggc tgagaccgga gaagaacgac accgaagtat aagccgcacc aatcaccgaa
     1321 gtaatcgaag ccgcccaaat caccacgccg aaaatcagca ggccgatgta tcccgccgca
     1381 tattcaaacg gtgtggaagc agggttgtcg ggattgagct gtacgccttg gctgaccacg
     1441 cccaaaaccg ccaaaaacaa tacaatccgc ataatcgagg caatcaggat cgcccgcacc
     1501 gagctttggc tcacttccgg caacgccgat ttgcctttga tacctgcgtc cagcagacgg
     1561 tgcgcaccgg cgaaggtgat gtagccgccg accgtgccgc ccaccagtgt aacaatcgcc
     1621 attgcatcga gtttttccgg cataaaggta tgcacggcgg catctgccag cggcggattc
     1681 gcctgccatg ccacataaac cgtcagcgca atcattacga aacccatcac ttgggcgaat
     1741 ttgtccatca ctttgcctgc ttctttaaac agaaacacac cgatggcaat cacgccgctg
     1801 atcacggcac cggtttccgg cgacagtccg gtcagcaggt tcagacccaa gcctgcgccg
     1861 ccgacgttgc caatattgaa cgccaaaccg cccatcacaa tcagcacagc caagaaatag
     1921 cctgcgccgg gcaagacctg attggcaata tcctgcgcct gtttttcgga aacggcgaca
     1981 atccgccaaa tattgagctg cgccccgatg tcgagcagaa tcgagagcag aatcacaaag
     2041 ccgaaacttg ccgccagtgc ttgggtgaag gtggcggttt gggtcagaaa gcccgggccg
     2101 atggcggaag tcgccatcag gaatgcagcg ccgattaagg catttctgcg gtttttttga
     2161 tcagacataa tcgcttatcc tctataaaat tggttgttgc tgtgtttggg cgaaacctgc
     2221 ggttttagct acgcagaaac tcgctttgct cgttttggcg aaacctgcgg ttttcagacg
     2281 gcctatgaac tgtttttcaa gcagaaactt tgatgcctgc cgccagtagt tcctgccgga
     2341 ttttttcggc aaacaccacg gcgtgcggcc cgtctccgtg cagacagatg ctgtcggctt
     2401 gcacggcaac caggctgccg tccactgctt tgacctgccc gtcccgcacc atctgcaata
     2461 cttgggcgat ggcttcttcg tcgctgtcca cctgcgcatc ggggcggctg cggggaacca
     2521 gcgtaccgtc gggcatatag cggcggtcgg cgaatacttc ggaaatcaca cccaagcctg
     2581 cggcttttcc ggcttccaag agcaggctgc cggaaagtgc catcaatttc aatttcgggt
     2641 cgaaatccgc cacaattcgg gcaacggtat ccgccagcgc acggtttttc gccgcttggt
     2701 tgtacattgc gccgtgcggt ttgacataag ccatttccaa accctgatca cggcacaagg
     2761 cctgcaatgc gcccaactgg taattcagac acgcccgcaa atcggcttcg gacagattca
     2821 tttcggtacg gccgaagttt tcccgatcgg gatagccggg gtgtgctccg atgcgcacgc
     2881 cgttttgttg ggcatacgcc aatgccgccc gaatatcggc aatgctgccg gcgtgttggg
     2941 cgcaggcgat gttggccgaa gtaatcagct gcaacaaggc ttcgtcgctg ccgcagcctt
     3001 cggcgagatc ggcgtttaaa tcaacctgct tcatgggtga ttctccgtat ttggttcaga
     3061 tagacttggt ttttgcgccg cagggcggtg gcttctttca agccgattat tttgaatttg
     3121 actttgctgc cgaagcgcac ctgtgccagc ctgcccaaat cggcggcggc aacggtagcg
     3181 attttcggat aaccgccggt ggtttgcgca tcggccagca ggataatcgg tttgccgccg
     3241 ggcggcacct gcacggttcc tgcctgaaca gcgtgggaca gcatttccaa aggttgcgac
     3301 agggtcagcg gctgtccgtc gaagcggtag cccatgcggt tgctatcgct ttgcagcgtc
     3361 cacgtttccc gttccagatt cagacgccct ttttcactga aagcggcata ttccgacgaa
     3421 ggaacaaggt ggacggtatc ggtaaacggt atcggggcaa tgccgacttt ggacaattcc
     3481 tgcgcacctt tgccgatggg gagacaatca cctttttgca gcattctgcc ctgatggccg
     3541 ccgaaaccgg ctttcaggtc ggtgcttctc gaacccatca cttccggcac atcaaatccg
     3601 cccgccacgc acacatagcc gtacatgccc tgcacggcac gcaccatttt caaggtctgc
     3661 cctttgcggg cggtataacg ccaatacgaa tagaccggtt cgccgtccaa ttccgcctga
     3721 tacacggcac cggtgagaca aaacggcgta tcccgttcaa acaccagcat tatcccgccc
     3781 aaagcgattt cgattgcggc cgtgccttcg tcgttgccca ataaaatatt acccgccgcc
     3841 aaagcaaccg tgtccatcgc accggcatga ccgatgccgt aacgccggtg tccgtagcgt
     3901 ccggtatcct gaatatgcgc cggtgcctgc actgccgaaa catgaatcat ggctcaatcc
     3961 tttctgcaac aaagcggact tggtcacccg ccgccagcag ggtcggcgga ttcaaatcgg
     4021 ctcggaacaa gggtaattcg gttctgccga taatctgcca gccgccgggc gaagcgaacg
     4081 gatacacacc ggtctgactg ccgccgatac cgaccgaacc ggcaggaacg gacgttctcg
     4141 gcacggcacg gcggggcgtg tgcaatgctt cgggcaagcc gcccagataa gggaaaccgg
     4201 gctggaagcc catcataaat acggtataag tttgcgccgt atggcggcgg acgatttcgg
     4261 aaataaccgt ctgatggaaa gcagcgactt ccgccaaatc cgggccgtat tcgccgccgt
     4321 agcagacggg aatttccacc agtttgccct gatggtctgt aacggcggtg tgttcccaca
     4381 catattgcaa ttcatcggca agcgtcgcca aatcggtatc gaaacgggtg aacacggtca
     4441 gattgttcat gccgaccacc acttcctcaa tcctgtcgtg ctgcccgagc gcagcggcaa
     4501 acgcccacaa cttttgctgt ttgcccagtt cggaaggcgc attcagtcgg cagaccaaag
     4561 cggattcgct gattggtgtg atctctattc tcatttgttg ttcattttgg ttatgtttta
     4621 atgaatctat atgcaggggc ggcggtttgt caatatcttc tgtgctgcat catcaaaccg
     4681 tcgattggaa aagtgctgcc ctgccgctgc actttttcag acgaccttaa accgtttcta
     4741 ttaaaatagc gcattccact tttcagacgg catccttatg tttcccgacc aatccgcccc
     4801 caacctgctg caaggcttga atcccgaaca actctccgcc gtaacctggc cgccgcaatc
     4861 cgcacttgtg ctggcgggcg cgggcagcgg caaaacgcgc gtgctgacca cgcgcatcgc
     4921 atggctgttg caaagcggac aagccagcgt gcacagcatt atggcggtaa cgtttaccaa
     4981 caaagccgcc aaagaaatgc aaacccgttt gggcgcgatg attcccatca acgtccgcgc
     5041 catgtggctc ggcacgttcc acggcctctg ccaccgcttt ttgcgcctgc accaccgcga
     5101 tgccggtctg ccgtcatcct ttcaaatcct cgacagcggc gaccaacttt ccctcatcaa
     5161 acgcctgctc aaaagcctca acatcgccga agaaatcatc gcgccgcgtt cgctgcaagg
     5221 ctttatcaac gcgcaaaaag aatccggttt gcgcgcttcc gtgttgagcg cgcccgatcc
     5281 gcacacaagc cgcatgatcg aatgctacgc cgaatacgac aaaatctgcc aacgcgaagg
     5341 cgtggtcgat tttgccgagc ttatgctccg cagctacgaa atgctgcaaa gcaacgaaat
     5401 cctgcgccag cattaccaaa accgcttcaa ccacattctc gtcgacgagt tccaagacac
     5461 caacaaactg caatacgcct ggctcaaact catggcgggc ggaaacgcag cggtatttgc
     5521 cgtcggcgac gacgaccaaa gcatttaccg tttccgtggc gcaaacgtcg gcaacatgac
     5581 cgcgctgatg gaagaattcc acatcgacgc gcccgtcaaa ctcgaacaaa actaccgctc
     5641 cgtcggcaac atccttgccg ccgccaatgc cgttatcgaa aacaacgacg aacgactcgg
     5701 caaaaacctg cgcaccgacg ccgaagcagg cgacaaaatt cgctactact ccgcctttac
     5761 cgacctcgaa gaagcccggt tcatcgtgga cgaaaccaaa gccctcgaac gcgaaggctg
     5821 ggatttggac gaaatcgccg tcctctaccg tagcaacgcc caatcccgcg ttatcgaaca
     5881 aagcctgttc cgcagcggca tcccctacaa aatctacggc ggcttgcgct tttacgaacg
     5941 ccaagaaatc aaacacgccc tcgcctacct gcgcctcgcc gtcaatcccg acgacgacaa
     6001 cgccctcttg cgtgtcatca acttcccacc gcgcggcatc ggtgcacgta ccgtcgaaaa
     6061 tcttcagacg gcctcaaacg aacaaggcat caccctctgg caagccgcct gcaacgccgg
     6121 cgcgaaagcc gccaaagtcg tcgccttcgt ccgcctgatt gaagccctgc gcaaccaagt
     6181 cggacaactg tccctgtccg aaatcatcgt cggcatcctc aaagacagtg gcttgaccga
     6241 acactaccgc acccaaaaag gcgacaacca agaccgtctc gacaaccttg acgaactcgt
     6301 caacgccgcc atcgagttca aacccgaaga cagcaacttc gaaatcctgc ctgaaaacat
     6361 ttcagacgat cccgccttcc ccatcctcgc tttcttgagc aacgccaccc tcgaatccgg
     6421 cgaaaaccaa gcaggcgtgg gcgaaaaagc cgtccaactc atgaccgtcc acgccgccaa
     6481 aggcttggaa ttcaacgccg tcttcctcac cggtatggaa gaaggccgtt tccccagcga
     6541 aatgagcctt gccgaacgcg gcggcctcga agaagaacgc cgcctcatgt acgtcgccat
     6601 cacccgcgcc cgcaaacgcc tctacatcac catggcgcaa caacgcatgc tgcacggaca
     6661 aacccaattc ggcatcgtct cccgcttcgt cgaagagatc ccacccgaag tattgcacta
     6721 cctgtccgtc aaaaagcctg cctacgacag ttacggcaac acgcgccaaa ccgccgcatc
     6781 caaagacaaa atcatcgacg actacaaaca gccccaaacc tacgcaggtt tccgtatcgg
     6841 acaaaacgtc cgccacgcca aattcggcac cggcgtgatt atcgatgccg cagataaagg
     6901 cgaatccgcc cgactgacca tcaatttcgg caaacagggc gtgaaagagt tggacaccaa
     6961 gtttgcgaaa ttggaagaga tgtaaatttg aaatgcaggc tggatactcg tatccgacaa
     7021 aaatatttga cgcgtctatc gtttccgaaa aaccgctgtt ggaaaatgtc ggattcgaga
     7081 atccgaccta tggcaaaaaa ctgtagcaag gacaaggcaa aaggccgtct gaatccggta
     7141 acaacaaatt ttgccgaaac ctccgccgtc attcccgcgc aggcgggaat ccagaccttt
     7201 cggcacggga acttatcgga taaaaggttt ctttagattc cacgttctag attcccgcct
     7261 gcgcgggaat gacggacggt aaaagccggg tatagatacc taacccttgt ttatagctga
     7321 aaatcaataa ggaagaacat tatgtcccaa gtttttaaag attttgattt gtcctccgta
     7381 tgggaatccg acagttgggc agatgaaaac tacaaagaag ccccgtttac ccctgaaatt
     7441 ttggctgccg tagaaagtga actgggctat aaattgccgc aaagttttat tgaattgatg
     7501 gcggtacaaa acggcggaat atttgtcaaa aactgttttc cgaccacgca gagaaattcg
     7561 tgggcggaaa atcatgtgca aatttgcgag gtatcgggca tcggctttga aaaagaaggg
     7621 agtttgtgcg gcgaaacagg gcaaaaactt tggctggaag aatgggaata tccgcccatc
     7681 ggcgtgtatt ttgccaacga cccgtcaggc ggtcatgcca tgtttgcctt ggactatcgg
     7741 gcgtgcggca aagacggcga gccgaaagtg gtgtttgtcg agcaagaatc ggattttgaa
     7801 atcgtcgaac ttgcccccga ttttgaaacc tttatccgca gcttgcggca tgaagatgag
     7861 tttattgacg aggaaatata aaacggcggt tgaaaaaccg gaatcatcaa gggaaaacgg
     7921 gcgaaataac ggataatcgc ttgaatccgt aaggaaaacg gtttggtgga acgcgccatc
     7981 caagaccttt gcaaagaaaa actgtctccg acagcattga cattattaac agaacttatc
     8041 aagtttggag ctatctcaaa tataattcgg ttatcctttt gtatccatta aatcatatgc
     8101 ttcaattaat tgttgttcta gctcttgtac caattttgaa ttgcgaattc ctgacacaat
     8161 ctcaaattct tctgcatcta tgcaaacacc tgcataaatt tcaataacaa gggaacgcaa
     8221 taattgaagc tcttctcttg ttaaagaaat aataatgtca tcacctgtgt aattgattat
     8281 attcataata attttatttt tgtttgtcaa agtaagtttt gcctaaggtt ggtctaaatg
     8341 cagttccacc atcttttgaa tttgggtctc tgattacaat tgctccagac ttatcatccc
     8401 aaattgctct tatgtgtttg gattgtaatc ttcgaattcc caagaaaaaa atcgtaataa
     8461 gtttgaaagt gtcaaatccc aagtttcttt tgagcaatat tctaatattt tatcaatttc
     8521 acttttaata atcttatgat caaactgttc taatattaat gcattagacc aaaaaaaacc
     8581 ttctttatta caatgatggg aaatccattt aggagaacaa atgcaaagtg aaaaaataga
     8641 tgagccttgt tctccttcga ttccgatatc caaatctatc catctatgga aattatctgg
     8701 aatttcgggg gtaaattttt caaaatcaat atcatataaa tttatgcttt ttaaatccaa
     8761 tttaatcatt agggctgtcc tagataaata gggaaattca aattaagtta gaattatccc
     8821 tatgagaaaa agtcgtctaa gccggtataa acaaaataaa ctcattgagc tatttgtcgc
     8881 aggtgtaact gcaagaacag caacagagcc tgacagcatt gtttatacgg attgttatcg
     8941 tagctatgat gtattagatg tgagcgaatt tagccatttc cgtatcaatc acagcacaca
     9001 ttttgctgaa cgacaaaacc atatcaatgg aattgagaat ttttggaacc gggcaaaacg
     9061 tcatttacgc aagtttaacg gcattcccaa agcgcatttt gagctgtatt taaaggagtg
     9121 cgaatggcgt tttaacaaca gtgagataaa agttcttgtt ccattttaaa acaattagta
     9181 aaatcgagtt tatcttagtt gtccaggaca gccccattat ttttataaca ccgtgaagcc
     9241 gcacagcagt ttgaacagtg atacgccgtt tgcgggctta cgagtttatt ttcccggcct
     9301 gcagtttgag caatacggtg atttcctacg gttaatacaa atgtttacac attgatacat
     9361 ttcatttata gttccgccta tttgaaaata gaaaatatga attcgaccgc aagtaaaacc
     9421 ctgaaaggat tgtcgctggt gtttttcgcc tctggattct gcgccctgat ttaccaggtc
     9481 agctggcaga ggcttctatt cagtcacata ggtatcgatt tgagttcgat tactgtcatt
     9541 atttctgtat ttatggtcgg cttgggtgta ggtgcgtatt tcggtggacg cattgctgac
     9601 cgttttcctt caagtatcat ccccctgttt tgcatcgctg aagtatccat cggtctgttc
     9661 ggtttggtaa gcaggggtct gatttccggc ttggggcatc ttttagttga ggctgatttg
     9721 cccatcatcg ctgctgccaa tttcctctta ttgctgcttc ctacctttat gatgggcgcg
     9781 accttgccct tgctgacctg tttttttaac cggaaaatac ataatgttgg cgagtctatc
     9841 ggtaccttat attttttcaa cactttgggt gcggcactcg gatcgcttgc cgccgccgaa
     9901 tttttctacg tcttttttac cctctcccaa accattgcgc tgacagcctg ctttaacctt
     9961 ctgattgctg cttcagtatg gctgcgttac agaaaggatg gatatagtga acactaaacc
    10021 gaatactagt ttgatttata tgctttcttt ccttagcggc ttattgagct tgggtataga
    10081 agtcttgtgg gtaaggatgt tttcgttcgc agcacagtcc gtgcctcagg cattttcatt
    10141 tactcttgcc tgttttctga ccggtatcgc cgtcggcgcg tattttggca aacggatttg
    10201 ccgcagccgc tttgttgata ttccctttat cgggcagtgc ttcttgtggg cgggtattgc
    10261 cgactttttg attttgggtg ctgcgtggtt gttgacgggt ttttccggct tcgtccacca
    10321 cgccggtatc ttcattaccc tgtctgccgt cgtcagaggg ttgattttcc cgctcgtaca
    10381 ccatgtgggt acggatggca acaaatccgg acgacaggtt tccaatgttt atttcgccaa
    10441 cgttgccggc agtgcattgg gtccggtcct tatcggcttt gtgatacttg atttcttgtc
    10501 cacccaacag atttacctgc tcatctgttt gatttctgct gctgtccctt tgttttgtac
    10561 actgttccaa aaaagtctcc gactgaatgc agtgtcggta gcagtttccc taatgttcgg
    10621 catcctcatg ttcctactgc cggattctgt ctttcaaaat attgctgacc gtccggatcg
    10681 gctgattgaa aacaaacacg gcattgttgc ggtttaccat agagatggtg ataaggttgt
    10741 ttatggggcg aatgtatacg acggcgcata caataccgat gtattcaata gtgtcaacgg
    10801 catcgaacgt gcctatctgc taccctccct gaagtctggc atacgccgca ttttcgtcgt
    10861 tggattgagt acaggttcgt gggcgcgcgt cttgtctgcc attccggaaa tgcagtcgat
    10921 gattgttgcg gaaatcaatc cggcataccg tagccttatc gcggacgagc cgcaaatcgc
    10981 cccgcttttg caggacaaac gtgttgaaat tgtattggat gacggtagga aatggctgcg
    11041 tcgccatcct gatgaaaaat tcgacctgat tttgatgaat acgacttggt actggcgtgc
    11101 ctattccacc aacctgttga gtgcggaatt tttaaaacag gtgcaaagcc accttacccc
    11161 ggatggtatt gtaatgttta ataccacgca cagcccgcat gcttttgcta ccgccgtaca
    11221 cagtattccc tatgcatacc gctatgggca tatggtagtc ggctcggcaa ccccggtagt
    11281 tttccctaat aaagaactgc tcaagcaacg tctctcccgg ttgatttggc cggaaagcgg
    11341 caggcacgta tttgacagca gcaccgtgga tgctgcagca caaaaggttg tctctcgtat
    11401 gctgattcag atgacggaac cttcggctgg ggcggaagtc attaccgacg ataatatgat
    11461 tgtagaatac aaatacggca gagggattta accgtcttaa agggtttcag gcaacgcagg
    11521 ttttaggtaa cgtcctgcta gttcaaaaaa accgcatcac agcagtcggg acaaaatggt
    11581 ttaaacattt tgtcccgaat tcttattcct a
//
LOCUS       DAXHRP010000050        11484 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.050, whole genome shotgun sequence.
ACCESSION   DAXHRP010000050 DAXHRP010000000
VERSION     DAXHRP010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.050"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            204..1046
                     /locus_tag="ACFM72_000995"
     CDS             204..1046
                     /locus_tag="ACFM72_000995"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HFC6257577.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            1075..1539
                     /locus_tag="ACFM72_000996"
     CDS             1075..1539
                     /locus_tag="ACFM72_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HFC6257578.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGLRD
                     IPSAELADMVLKELLEHNTEAAVRFAALHKRFDNPADFASWLAQAVKTGGKA"
     gene            1572..2684
                     /gene="ribD"
                     /locus_tag="ACFM72_000997"
     CDS             1572..2684
                     /gene="ribD"
                     /locus_tag="ACFM72_000997"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HFC6257579.1"
                     /translation="MFSDTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALHQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEVAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERNEDRLHPYREHAHIRILMPSETAGGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAEDLADEIVLYRSPKILGGGGGGLFCL
                     LENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            2879..4300
                     /locus_tag="ACFM72_000998"
     CDS             2879..4300
                     /locus_tag="ACFM72_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HFC6257580.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEANAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFW
                     LFFAFKTESSCRLWQPLKRLPLYLHTLFCLTSSAAYTCFGTPANYPLFAGVWAAYLAG
                     CILRHRKDLHKLFHYLKKQGFPL"
     gene            4468..5709
                     /locus_tag="ACFM72_000999"
     CDS             4468..5709
                     /locus_tag="ACFM72_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NeuD/PglB/VioB family sugar acetyltransferase"
                     /protein_id="HFC6257581.1"
                     /translation="MSKFFKRLFDIVASASGLIFLSPVFLILIYLIRKNLDSPVFFFQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDGERLTPFGKKLRAASLDELPELWNILK
                     GEMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYI
                     DHFSLCLDIKILLLTVKKVLIKEGISAQGEATMPPFTGKRKLAVVGAGGHGKVVADLA
                     AALGRYREIVFLDDRAQGSVNGFSVIGTTLLLENSLSPEQYDVAVAVGNNRIRRQIAE
                     KAAALGFALPVLVHPDATVSPSATVGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHD
                     CLLNAFVHISPGAHLSGNTHIGEESWIGTGACSRQQIRIGSRATIGAGAVVVRDVSDG
                     MTVAGNPAKPLPRKNPETSTA"
     gene            5842..7017
                     /locus_tag="ACFM72_001000"
     CDS             5842..7017
                     /locus_tag="ACFM72_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HFC6257582.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEF
                     AAFAGTRYAVALANGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAALTPTTKAVIVVHLAGMPAEMDGIMALAKEHNLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYNHEHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKRLPEWTARRRENAAKLAESLG
                     KFSSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVGELNARKVPCYQGSCSEV
                     YLEKAFDNTPWRPKERLTNAVELGDTSLMFLVHPTLTDDEIAFCKKHIEAVLTEAAR"
     gene            7065..8975
                     /gene="pglD"
                     /locus_tag="ACFM72_001001"
     CDS             7065..8975
                     /gene="pglD"
                     /locus_tag="ACFM72_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HFC6257583.1"
                     /translation="MNLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYHAVTRFVSFRILTTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVETFVLISTDKAVRPTNTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTANETMLPWHELSALLDRIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            9033..10325
                     /locus_tag="ACFM72_001002"
     CDS             9033..10325
                     /locus_tag="ACFM72_001002"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HFC6257584.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(10378..11214)
                     /locus_tag="ACFM72_001003"
     CDS             complement(10378..11214)
                     /locus_tag="ACFM72_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HFC6257585.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RH"
     gene            11223..11465
                     /locus_tag="ACFM72_001004"
     CDS             11223..11465
                     /locus_tag="ACFM72_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257586.1"
                     /translation="MCVVNGGQGVSILSGGVAAVISKNRCMANAKEKPLCGHSRAGGN
                     PDFDLLEMFKVNRYFKLPDSCFRGNGDMTVFNFNLL"
BASE COUNT         2542 a         3676 c         2951 g         2315 t
ORIGIN      
        1 aaaagttacg gaacgaaaaa caaccaaaac cggacaagtc ggattcccgc ctgcgcggga
       61 atgacggaat cttaagtttc cgtctttgtt ttctgttttc tgttttcgag ggaataatgg
      121 ggaacaagcc gtatttcaga cggcattttc agttcggggt ataatccgaa tacttgcgac
      181 catctgaatc attgggacaa accatgtgtc aactgctggg catgaactgc aatacgccga
      241 ccgatattat gttttccttt gaaggcttcc gccgcagggg cggcattacc gaccaccatg
      301 ccgacggttt cggcatcggc tttttcgaag gcaaaggcgt gcgcctgttc catgacgaca
      361 aacccagtgc caattcgccc gtcgccgacc tcgtgcgcgc ctaccagatt aaatcggaaa
      421 acgtcgtcgc ccatatccgc aaagcatcac aaggacaaac ctcgctggcg aacacccatc
      481 cctttatgcg cgaaatgtgg ggcggctact ggctgtttgc ccacaacgga catttgattg
      541 attttttccc cgaacagggc gaatttttcc accccgtcgg cacaaccgat tccgaacgcg
      601 cgttctgcca catcctcaac cgcctgcgca cccgctttgc cgcccgtccc gacgacgaca
      661 cgctgtttga cgcgattgcg gggctgacgc acgaaatccg caagttcggg ctgtttaact
      721 ttatgctttc agacggcatt gccctgtttg cccacgccag cacactgctg cactacatcg
      781 tccgccaagc cccgttcggc aaggcgcgcc tgctcgacga cgacgtgatg gtcgattttg
      841 ccgaagtaac cacgccctcc gaccgcgtcg ccgttatcgc caccctgccg ctgacccgcg
      901 acgaatcatg gtcccaactt gccgtggacg aactggtcat gttccgcgaa ggcaacatcg
      961 tccgacacga ccgtcccgaa aaccccgtct atatgagtgc cgaagaaggt ctggaaatcg
     1021 cccgcgccgc cggcgtatcg gtttgacgtt cagacggcat caggaagaaa cgccatgaaa
     1081 tgcccgtttt gcgcccaccc cgacacccgc gttgccgatt cgcgtctgat ggaagaacgc
     1141 aacgccgtgc gccgccgccg ccactgcccc aactgcggca aacgcttcgg cacgctcgaa
     1201 accgccgaac tcaaaatgcc cgccgtcatc ggtccggaca aaaaacgttc gcccttcaat
     1261 gcacaacgcc tccgcaacga cctgaccgcc gccgcccgaa aatccgccct gacacccgaa
     1321 cagattgacg aaaccgtccg cctgacggaa cacaggctct acacttcggg tcttcgcgac
     1381 atcccctctg ccgaacttgc cgacatggtg ctaaaagagc tgcttgagca caacacggaa
     1441 gccgccgtcc gtttcgccgc cctgcacaaa cgcttcgaca atccggcaga ctttgcctcg
     1501 tggctggcgc aagccgtcaa aacaggcggc aaagcctgat tctccccaac ccatactgat
     1561 acggtatccc catgttttcg gacacagata tatccatgat ggaaaacgcc ctccgacttg
     1621 ccgctttggg gcgtttttcc acttcgccca atccgcgcgt cggctgcgtt atcgcacacg
     1681 gcagccaaat tgtcgggcaa ggcttccacg tcaaagcggg cgaaccgcac gccgaagtcc
     1741 acgccctgca tcaggcgggc gaaatggctc aaggcgcgac cgcctttgtt accctcgaac
     1801 catgcagcca ttacggacgc acaccgccct gcgccgaagc tctgctccgt tccggcgtaa
     1861 cacgcgtcgt cgccgccatg cgcgacccca acccgctggt tgcaggcaaa gggcttgccc
     1921 tgctcgaagt agctggcatc aagacggaat gcggtttact cgaacatcag gcaagggaac
     1981 tcaaccgagg cttcctgtcg cgcatcgaac gccgccgccc ctttgtccgc ctcaaatgcg
     2041 ccgtttcgct ggacggcaaa accgcccttt cagacggcag cagcttttgg attaccggcg
     2101 aagacgcgcg tgccgacgta caggttttgc gtgccgaaag ctgcgcggtg ctgaccggca
     2161 tcggcacggt gttggcggac aatccccggc tcaacgtccg cgcttttcca actttgcgcc
     2221 aacccgcacg catcgtgtta gacagccgcc tgcgcctgcc cttggacagc caccttctga
     2281 ccgacggaca atctccaacc tacatcgcca cactcgaacg caacgaagac agactgcacc
     2341 cctatcggga acacgcacac atccgcatcc tgatgccgtc tgaaacggca ggcggcaaaa
     2401 tcgacctgca ccacctgatg cgcctccttg ccgacgaagg tttcggcgaa atcatggtcg
     2461 aagcaggctc cgaactcaca tccgcatttt tggcagaaga tttggcggac gaaatcgttt
     2521 tataccgctc gcccaaaatc ctcggcggcg gcggcggcgg tttattttgc ctgctcgaaa
     2581 accgcgccgc cctttccgca ccgcccttgt ggacacccgt ttcaagcgaa atcctcggac
     2641 acgacatcaa aaccgtgttc cgaaaaaacg gcaacgcctt ttaaagggtt tgcgccgttt
     2701 cactatataa taacgccgat aaaaaacggc accattcaga ccgccgccca cccgaaaaaa
     2761 cgcaacccgg actgccgcac cccgccggca gccgcgacgg tctgaaagcc gtcaaattcc
     2821 gatcaagaaa ggcttcagac ggcacaggca gcatcccgcc gccgcccgga catcaaaaat
     2881 ggacacaaaa gaaatcctcg gctacgcggc aggctcgatc ggcagcgcgg ttttagccgt
     2941 catcatcctg ccgctgctgt cgtggtattt ccccgccgac gacatcgggc gcatcgtgct
     3001 gatgcagacg gcggcgggac tgacggtgtc ggtattgtgc ctcgggctgg atcaggcata
     3061 cgtccgcgaa tactatgccg ccgccgacaa agacaccttg ttcaaaaccc tgttcctgcc
     3121 gccgctgctg tctgccgccg cgatagccgc cctgctgctt tcccgcccgt ccctgccgtc
     3181 tgaaatcctg ttttcgctcg acgatgccgc cgccggcatc gggctggtgc tgtttgaact
     3241 gagcttcctg cccatccgct ttctcttact ggttttgcgt atggaagggc gcgcccttgc
     3301 cttttcgtcc gcgcaactcg tgcccaagct cgccatcctg ctgctgctgc cgctgacggt
     3361 cgggctgctg cactttccgg cgaacaccgc cgtcctgacc gccgtttacg cgctggcaaa
     3421 ccttgccgcc gccgcctttt tgctgtttca aaaccgatgc cgtctgaagg ccgtccggca
     3481 cgcaccgttt tcgcccgccg tcctgcatcg cggcctgcgc tacggcatac cgatcgcact
     3541 aagcagcatc gcctattggg ggctggcatc cgccgaccgt ttgttcctga aaaaatatgc
     3601 cggcctagaa cagctcggcg tttattcgat gggtatttcg ttcggcggag cggcattatt
     3661 gttccaaagc atcttttcaa cggtctggac accgtatatt ttccgcgcaa tcgaagcaaa
     3721 cgccccgccc gcccgcctct cggcaacggc agaatccgcc gccgccctgc ttgcctccgc
     3781 cctctgcctg accggcattt tctcgcccct cgcctccctc ctgctgccgg aaaactacgc
     3841 cgccgtccgg tttatcgtcg tatcgtgtat gctgccgccg ctgttttgca cgctggtaga
     3901 aatcagcggc atcggtttga acgtcgtccg caaaacgcgc ccgatcgcgc tcgccacctt
     3961 gggcgcgctg gcggcaaacc tgctgctgct ggggcttgcc gtgccgtccg gcggcgcgcg
     4021 cggcgcggcg gttgcctgtg ccgcctcatt ctggctgttt tttgccttca agaccgaaag
     4081 ctcctgccgc ctgtggcagc cgctcaaacg cctgccgctt tatctgcaca cattgttctg
     4141 cctgacctcc tcggcggcct acacctgctt cggcacgccg gcaaactatc ccctgtttgc
     4201 cggcgtatgg gcggcatatc tggcaggctg catcctgcgc caccggaaag atttgcacaa
     4261 actgtttcat tatttgaaaa aacaaggttt cccattatga aaatcgtttt gaccacatct
     4321 atggcaggct tgggcggcac gggcacgata tcatcgattg ccaaatggcg tgcaaaaacg
     4381 accccgttca gtccgacgaa atcgtccgcc gcttcaggcg cgacatttcc tatcggaaaa
     4441 tcgtcaacct gattgaaaga ttggcaaatg agtaaattct tcaaacgcct gtttgacatt
     4501 gttgcctccg cctcgggact gattttcctc tcgccagtat ttttgatttt gatatacctc
     4561 atccgcaaga atctagattc gcccgtcttc ttctttcagg aacgccccgg aaaggacgga
     4621 aaacctttta aaatggtcaa attccgttcc atgcgcgacg cgcttgattc agacggcatt
     4681 ccgctgcccg acggagaacg cctgacaccg ttcggcaaaa aactgcgtgc cgccagtttg
     4741 gacgaactgc ctgaattatg gaatatctta aaaggcgaga tgagcctggt cggcccccgc
     4801 ccgctgctga tgcaatatct gccgctgtac gacaacttcc aaaaccgccg ccacgaaatg
     4861 aaacccggca ttaccggctg ggcgcaggtc aacgggcgca acgcgctttc gtgggacgaa
     4921 aaattcgcct gcgatgtttg gtatatcgac cacttcagcc tgtgcctcga catcaaaatc
     4981 ctactgctga cggttaaaaa agtattaatc aaggaaggga tttccgcaca gggcgaagcc
     5041 accatgcccc ctttcacagg aaaacgcaaa ctcgccgtcg tcggtgcggg cggacacgga
     5101 aaagtcgttg ccgaccttgc cgccgcactc ggccggtaca gggaaatcgt ttttctggac
     5161 gaccgcgcac aaggcagcgt caacggcttt tccgtcatcg gcacgacgct gctgcttgaa
     5221 aacagtttat cgcccgaaca atacgacgtc gccgtcgccg tcggcaacaa ccgcatccgc
     5281 cgccaaatcg ccgaaaaagc cgccgcgctc ggcttcgccc tgcccgttct ggttcatccg
     5341 gacgcgaccg tctcgccttc tgcaacagtc ggacaaggca gcgtcgttat ggcgaaagcc
     5401 gtcgtacagg caggcagcgt attgaaagac ggcgtgattg tgaacactgc cgccaccgtc
     5461 gatcacgact gcctgcttaa cgctttcgtc cacatcagcc caggcgcgca cctgtcgggc
     5521 aacacgcata tcggcgaaga aagctggata ggcacgggcg cgtgcagccg ccagcagatc
     5581 cgtatcggca gccgcgcaac cattggagcg ggcgcagtcg tcgtacgcga cgtttcagac
     5641 ggcatgaccg tcgcgggcaa tccggcaaag ccgctgccgc gcaaaaaccc cgagacctcg
     5701 acagcataag cgattaaaat acacccccgt acagaccgat tttgacaaca cctgcggcgc
     5761 gcgcccgatt cttcggaaca cgcccccctt cagacggcat agggtcggaa atgccgtctg
     5821 aaaaccgacg gacaaaccat catgctgaac actttccttt ccccgtggcc ctgcttcacc
     5881 caagaagaag ccgatgccgt ttccaaagtc ctgctgtcca acaaagtcaa ctactggacg
     5941 ggcaacgaat gccgcgaatt tgaaaaagaa tttgccgcct ttgccggcac gcggtacgcc
     6001 gtcgcccttg ccaacggcac gctggcactc gatgtcgcgc tcaaagcaat gggcataggc
     6061 gcgggcgacg atgtgattgt tacctcgcgc accttcctcg cttccgcgtc ctgcattgtg
     6121 aacgcgggcg caaaccccgt gtttgccgat gtggatttga acagccaaaa catcagcgcg
     6181 gaaaccgtca aagccgcgct gacaccgact accaaagccg tcatcgtcgt ccacctcgcc
     6241 ggtatgcccg ccgaaatgga cggcattatg gctttggcaa aagaacataa tctttgggta
     6301 atcgaagact gcgcccaagc gcacggcgca aaatacaaag gcaaatccgt cggctctatc
     6361 ggacacgtcg gcgcgtggtc gttctgccaa gacaaaatca tgaccaccgg cggcgaaggc
     6421 ggtatggtta cgaccaacga caaaaccctg tgggaaaaaa tgtggtcgta caaagaccac
     6481 ggcaaaagct acgatgccgt gtacaaccac gaacacgcgc ccggtttccg ctggctgcac
     6541 gaaagtttcg gcacaaactg gcgtatgatg gaaatgcagg cggtcatcgg acgcatccag
     6601 ctcaaacgcc tgcccgaatg gacggcgcgc cgccgagaaa acgccgccaa gctggcggaa
     6661 agtttgggca aattcagcag catccgcttg gttgaagtcg ccgactacat cggacacgcg
     6721 caatataagt tctacgcctt cgtcaaaccc gaacacctca aagacggctg gacgcgcgac
     6781 cgcatcgtcg gcgaactgaa cgcgcgcaaa gtcccctgct atcaaggcag ctgctccgaa
     6841 gtctatttgg aaaaagcctt cgacaacacg ccgtggcgac cgaaagagcg tttgacaaat
     6901 gctgtcgagt tgggcgacac cagcctgatg ttcttggtgc acccgacgct gaccgacgac
     6961 gaaattgcgt tttgcaaaaa acacatcgaa gccgtcttga ccgaagccgc acgataaccc
     7021 ttcagacggc atatgccgcc tgaaaacaca taccgcccca cgatatgaat ctggaaactc
     7081 tgatcgccct gccgcgcaac atcaagaaaa tctgtttcct catacacgat tttctgatga
     7141 ttttcattgc cttttggttc acccaaagcc taaaggccga ctactcggac gaatggttcg
     7201 attttgccaa ctggcagtct tttttgctga ctgccttgct gaccatcaca ttatttatcc
     7261 gaatggggct ttaccacgcc gttacacgct tcgtcagctt ccgcatcctc accaccgcac
     7321 tggcgggcag cctcgcctcc gccgtgttgt ttttcctcaa tacgctgata tttgaagaaa
     7381 ggctgcgcct cgccctgccg attgtctatt tcttactgct gtttgtttcc gtgaccggct
     7441 cgcgtatggt tttgcgcgga ctgttgtccg aacaccccaa aaaacagatg atccctgtca
     7501 tcatttacgg cgcgggacgg tcgggcagac aactgcttga ggccgtcaaa caaatgcgcg
     7561 aatattccgc cgccgccttt gtagacgacg accccaaact gtggcacacc gtcatctacg
     7621 accttgccgt ttaccagccc gatgccatcg ccttcctcat cgaacgctac ggcgtggaaa
     7681 aaatcctgct cgccatcccc ggcgcgaccc aggaacaacg ccgccgaatc atcaacaaac
     7741 tggaagccta tccgtgcgaa gtgttgacca ttcccggaat gaaagacctg atggacggaa
     7801 aaatcagcat cggcacgctc aaaaaaatct ctgtgtccga cctgctcggg cgtgattccg
     7861 tcgcgcccga cgaccgcctg atgagtgccg acatcgaagg caaaaccgtc atggtaaccg
     7921 gcgcgggcgg ctccatcggt tcggaactct gccgccagat tatccgccgc cgccccgaaa
     7981 agctgctgct gttcgagtta tccgaattcg ccctgtacgc cgtcgaaaaa gaattgcgcg
     8041 aaacctgcat ccaaaaacgc ctcgacaccg aaatcctgcc ctttctcggt tcggtgcaaa
     8101 accgcacgct gctcgaacac gtcatgaccg ccttttccgt tgcgaccgtc tatcacgccg
     8161 ccgcctacaa acacgtcccc atggtcgagt tcaacaccgt cgaaggcata cgcaacaaca
     8221 tcttcggcac actcgagtgc gcgcttgccg ccacgacatc gggcgtggaa actttcgtcc
     8281 tcatctccac cgacaaagcc gtccgcccca ccaacaccat gggtgccggc aaacgcatgg
     8341 cggaactctg ccttcaagcg ctcgccgccg aacccggaca aaaaacccgc ttcagcatgg
     8401 tgcgtttcgg caatgtttta ggttcgtccg gctccgtcgt cccgctgttt gaaaaacaga
     8461 ttgccgaagg cggcccgctt accctgaccc accctgaaat cacacgttat ttcatgacca
     8521 tacccgaagc cgcccaactc gtcatacagg caggcgcgat gggtacgggc ggcgacgtat
     8581 tcgtcctcga tatgggcgaa tccgtcaaaa tcatcgacct tgcccgccaa atgattacct
     8641 taagcggcct caaacccaaa acacccgaac aacccgacgg cgacatcgaa atcctcatta
     8701 ccggactgcg tcccggcgaa aaactctacg aagagctgct catcggcgac aacgtccgca
     8761 aaaccggcca tccgcgcatc atgaccgcca acgagaccat gctgccgtgg cacgagctct
     8821 ccgccctgct cgaccgcatc cgtgcggcct gcgaccgtta cgaccagcag gcaatccgca
     8881 ccctgctcat caacgccccg accggcttta ccccaagcga cggtatctgc gacctgcttt
     8941 gggtacgaga aacacacaga aaaaatgccg tctgaacctt cagacggcat aacgtacaaa
     9001 ccaacctacc ttacacacac acggagtttg acatgcagtt ttcggcattc ggcgaaaaat
     9061 tcacgcaaca cagcggcatc ctccaactga tggacgacct cggcgacgcg ctcaaaagcg
     9121 acaagcccgt caacatgctc ggcggcggca acccggcgcg cattccggaa atcgatcggg
     9181 cgttcgccga catattctcc aaactggcgg cagaacacgc cgtcgaaaac atcggcaact
     9241 actccaaccc ccaaggcgat gccgcgctga ttgacgcgtt gaccgccttc ctcaaccgcg
     9301 aatacggctg gaacctgacc gccgacaata tcgcgctgac caacggttcg caaaacgcgt
     9361 ttttctattt attcaacctc ttcggcggca aattcaagct ttcagacggc acatccgcag
     9421 aaaaagccat tttgttgccg ctcgcgcccg aatacatcgg ctatgccgac gtacatatcg
     9481 aagggcagca cttcgtttct gtcaagccca aaatcgaaaa cgtcgaacac gaaggcgaag
     9541 caggcttctt caaataccgc gtggactttg acgcactgga aaacctgccc gaactcaaag
     9601 cgggcaaaat cggcgcgatt tgctgttcgc gcccgaccaa cccgaccggc aatgtgttga
     9661 ccgacggcga aatggcacgt ttggacgctt tggcgcgtga acacgggatt ccgctgatta
     9721 tcgacaacgc ctacggaatg ccgttcccca acatcattta cagcgacgta acgctgaatt
     9781 ggcacgaaaa catcatcctc tgcttcagcc tttccaaagt cggcctgccg ggcgttcgca
     9841 ccggcatcat cgtcgccgcg cccgaagtcg tcaaagccgt cagcagcctg aacgcgattg
     9901 tgaaccttgc ccccacgcgc ttcggcgcgg ccatcgccgc cccgctgctg gaaagcggcg
     9961 agatgaaacg gcttgccgac caagtcatcc ggccgtttta ccgcaatcag gcgcaaaccg
    10021 ccgtctcgct gctcaagcgc gagctgggcg cgtacccgat gaaaatccac aaacccgaag
    10081 gcgcgatttt cctgtggctc tggtttgaaa acctgcccgt ttcttcgcaa accctgtacg
    10141 aaatgctcaa agccgaaggt acgctgatta ttccgggcga gcatttcttc gtcggcatcg
    10201 acacgcggga ttacccgcac gcgggcgagt gcatccgcat gagcatcgcg caggacgctc
    10261 aaacgctgga aaaaggcatt gccgccatcg gtaaaaccgt ccgaaaactg tacgacaacg
    10321 tttaaaacgc aaaaaaatgc cgtctgaaag gttttcagac ggcattttta tccgcattca
    10381 atgtcgggaa aaatgcgccc acaccggcct gcagttttcc ggcagctcgg gacacgcacc
    10441 gaggatgccg ccgctgaagt cgtttaaacg gtggaagtcg ctgcccgcgc tggcgagcat
    10501 accgaagcgt tctgccaaaa gcgcgtagtt gaggcggtcg tttttgcagc agttgccgct
    10561 gtggacttcg atgcctgcgc cgccgaggtt tttaaattct tcaaacagat tgcgcttggc
    10621 ggtggcggac aaatcgtagc gcatggggtg ggcgatgact gccatgccgc ccgcgccgtt
    10681 gacggcggag acgcagtctt ccagcgtcgc ccattcgtgg cggacggcgc aggatttgcc
    10741 gtcgcccaag tatttggtga acgcctgctg cttgtttttg acgtgtccca cccgaatgag
    10801 gaactcggcg acgtgtgtgc ggctgaccat ttctttgttt gccgccagcg cgagcgcgcc
    10861 gtcgtatgcg cccgaaatgc cgcgtttttc cagcttggcg gcgatggctt cgaggcgttt
    10921 cagacggcct tgccgcactt gcgccaacag gttttgcagg ttttcgtctt gttcgtcaaa
    10981 gtctaagccg acaacgtgta tggtacgccc gcgccacgtt acggagattt ccacgccgtt
    11041 aatcaggcgc aaaccgagcc tgtcggcttc ggcacgcgct tcggcgatgc cgccggtgtg
    11101 gtcgtggtcg gtcaacgcca gcagcgtgca gccgttttga tgcgcgaggc gcacaacttc
    11161 ggcgggggag agcataccgt cggaaacggt ggaatggcag tgcaggtcta tcataaggcg
    11221 ttatgtgcgt ggtaaatggt gggcagggtg tttcaatatt gtcgggcggt gtggcggcgg
    11281 tgatttcaaa aaacaggtgt atggcaaatg caaaggaaaa gccgctatgc ggtcattccc
    11341 gcgcaggcgg gaatccagac tttgatttat tggaaatgtt taaggttaac cgctatttca
    11401 aacttccgga ttcctgcttt cgagggaatg gcgatatgac cgttttcaat tttaatctac
    11461 tataaaagac tgtctgaaaa cgtg
//
LOCUS       DAXHRP010000051        11406 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.051, whole genome shotgun sequence.
ACCESSION   DAXHRP010000051 DAXHRP010000000
VERSION     DAXHRP010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11406
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.051"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..77)
                     /locus_tag="ACFM72_001005"
     CDS             complement(<1..77)
                     /locus_tag="ACFM72_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFC6257587.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            280..1608
                     /gene="miaB"
                     /locus_tag="ACFM72_001006"
     CDS             280..1608
                     /gene="miaB"
                     /locus_tag="ACFM72_001006"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HFC6257588.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1693..3600)
                     /gene="dxs"
                     /locus_tag="ACFM72_001007"
     CDS             complement(1693..3600)
                     /gene="dxs"
                     /locus_tag="ACFM72_001007"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HFC6257589.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSENKPAAKPTYTQVF
                     GKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACE
                     GMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLR
                     CVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKGII
                     RREGEKTAFIAFGSMVAPALAVARKLNATVADMRFVKPIDEELIVRLARSHDRIVTLE
                     ENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVERRV
                     RAWLSDRDAAN"
     gene            complement(3685..4602)
                     /gene="xerC"
                     /locus_tag="ACFM72_001008"
     CDS             complement(3685..4602)
                     /gene="xerC"
                     /locus_tag="ACFM72_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HFC6257590.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEAEGGVPQGLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4796..5860
                     /gene="fba"
                     /locus_tag="ACFM72_001009"
     CDS             4796..5860
                     /gene="fba"
                     /locus_tag="ACFM72_001009"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HFC6257591.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAAGKLSHDQMLTGVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEHGGKIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            5880..6842
                     /locus_tag="ACFM72_001010"
     CDS             5880..6842
                     /locus_tag="ACFM72_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HFC6257592.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTAFCCFSLTAALILTACSSGGGGVAADIGAGLADALTAPLDHKDKGLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGKLITLESGE
                     FQVYKQSHSALTALQTEQVQDSEDSGKMVAKRQFRIGDIAGEHTSFDKLPKGGSATYR
                     GTAFGSDDAGGKLTYTIDFAAKQGHGKIEHLKSPELNVELATAYIKPDEKRHAVISGS
                     VLYNQDEKGSYSLGIFGGQAQEVAGSAEVETANGIHHIGLAAKQ"
     gene            6982..7659
                     /gene="tsaB"
                     /locus_tag="ACFM72_001011"
     CDS             6982..7659
                     /gene="tsaB"
                     /locus_tag="ACFM72_001011"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HFC6257593.1"
                     /translation="MQADFNRPVLAIDTGTSYLSLALRADGETHLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSGYQVGRAADIRLPEGCAFSDG
                     IGNAFALENRPPFSGKPDMPTAADFLNLAEEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERRALL"
     gene            7656..8096
                     /gene="rimI"
                     /locus_tag="ACFM72_001012"
     CDS             7656..8096
                     /gene="rimI"
                     /locus_tag="ACFM72_001012"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HFC6257594.1"
                     /translation="MNIRRAVYADCAALAALDAVCNPSAWTQHQFESALVSPSEQVFL
                     AEKDGRLAAFIVWQNLPDESELHLIATAPECRRQGIASALLEYWYAHLPEGTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8090..8827
                     /locus_tag="ACFM72_001013"
     CDS             8090..8827
                     /locus_tag="ACFM72_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC6257595.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMP
                     SEQAVANALGQIARELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8889..9530
                     /gene="pyrE"
                     /locus_tag="ACFM72_001014"
     CDS             8889..9530
                     /gene="pyrE"
                     /locus_tag="ACFM72_001014"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HFC6257596.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRQSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIQFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9604..10038
                     /locus_tag="ACFM72_001015"
     CDS             9604..10038
                     /locus_tag="ACFM72_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HFC6257597.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGMFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10035..11345
                     /gene="argA"
                     /locus_tag="ACFM72_001016"
     CDS             10035..11345
                     /gene="argA"
                     /locus_tag="ACFM72_001016"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HFC6257598.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
BASE COUNT         2566 a         3606 c         2975 g         2259 t
ORIGIN      
        1 aggaactgat gttccctgtc gccaaaattg ctggtacacg cacacagcag caatgccgcc
       61 cacacagccg gtttcataca cacctcccat taaagccaaa cattatacag ccgttctgac
      121 cgattaaatt catattttaa aacaatattc tgtttacaaa acccacatcg tgctataatc
      181 cgcaccgatt ttcagacggc atcgtcatgc cgtctgaaat tttttcattc caacaacaat
      241 cagccccgcg attacggctg cctgagaaag acacaaacca tgaaaaaagt atttatccgc
      301 accttcggct gccagatgaa cgaatacgac agcgacaaaa tgctcgccgt cctcgccgaa
      361 gaacacggcg gcatcgaaca ggttacccaa gccgacgaag ccgacatcat cttgttcaac
      421 acctgctccg tgcgcgaaaa agcacaggaa aaagtgttct ccgatttggg gcgcgtgcgt
      481 ccgctcaaag aaaaaaaccc cggccttatc atcggcgttg ccggctgcgt cgcctcgcaa
      541 gaaggcgaaa acatcatcaa acgcgcgcct tatgttgacg tggttttcgg cccgcaaacg
      601 ctgcaccgcc tgcccaaaat gattgtggac aaagaaacca gcgggctgtc gcaagtcgat
      661 atttccttcc ccgaaatcga aaaattcgac cacctgccgc ccgcccgcgt cgaaggcggc
      721 gcggcatttg tatcgattat ggaaggctgt tccaaatact gctcattctg cgtcgtcccc
      781 tacacgcgcg gcgaagaatt ctcccgcccg ctcaacgacg tattgacaga aatcgccaac
      841 cttgcccagc aaggcgtgaa agaaatcaac ctcttgggac aaaacgtcaa cgcctatcgc
      901 ggcgaaatgg acgacggcga aatctgcgac ttcgccaccc tgctgcgcat cgtccacgaa
      961 atccccggca tcgaacgtat gcgcttcacc accagccacc cgcgcgagtt taccgactcg
     1021 attatcgagt gctaccgcga cctgcccaaa ttggtttccc acctgcacct gccgattcaa
     1081 agcggttccg accgcgtatt gagcgcgatg aaacgcggct acaccgcttt ggaatacaaa
     1141 tccatcatcc gcaaactgcg tgccatccgt cctgatttat gcctgagcag cgatttcatc
     1201 gtcggcttcc ccggcgagac cgaacgcgag ttcgagcaaa ccttgaaact ggtgaaagac
     1261 attgccttcg acttgagctt cgtgtttatt tacagtccgc gccccggcac gcctgccgcc
     1321 aacctgcacg acgacacgcc gcacgaagaa aaagtgcgcc gcctcgaagc cttgaacgaa
     1381 gtcatcgaag ccgaaaccgc gcgcatcaac caaaccatga tcggcacggt tcaacgctgc
     1441 ctggtcgaag gcatctccaa aaaagacccc gaccaactgc aagcccgtac cgccaacaac
     1501 cgcgtcgtca acttcaccgg cacgcccgac atgattaacc aaatgatcga tttggaaatc
     1561 accgaggcct acaccttctc cctgcgcggc aaagttgtcg aagcctaaac cctcacgccg
     1621 aaaaaatgcc gtctgaagcg tttcagacgg cattttgcct tgtatcggca gacgacggcg
     1681 cggccgggcg gcttaatttg ccgcatcccg atccgacagc cacgcgcgca cacgccgttc
     1741 caccgcttcg gcactcaagc ccaaatcgtc taaaagtttt ttcggatcgc cgtgtccggt
     1801 tacggtatcg gcaacgccca aaagcaaaac gggtttgcag atgccgtgtt tcgccaatac
     1861 ttccagcacc gcgccgcctg cgccgccctg ttcggcgttt tcttcaaggg taacgatgcg
     1921 gtcgtggctt cgggcaaggc ggacaatcaa ctcttcgtct atcggtttga caaagcgcat
     1981 atcggcgacg gtggcgttca gttttctggc gaccgccaat gcaggggcga ccatactgcc
     2041 gaaggcaatg aatgcggttt tctcaccttc gcggcggata atgcccttgc cgatttccac
     2101 ggtttccatg ccgtctgaaa ccggcgcgcc cgtacccgtg ccgcgcggat agcggacggc
     2161 ggcgggcgcg tctgcctgat agcaggtcga aagcaacagg cggcattcgt tttcatcgct
     2221 cggcgcggcg acaatcatgt tcggcacgca gcgcaaaaag ctcaaatcgt acagaccggc
     2281 atgggtcggg ccgtccgcgc cgacgatgcc cgcgcggtcg acggcaaaca aaacgggtag
     2341 gttttgcagg gcgatgtcgt gcaccagttg gtcgtaggcg cgttgtaaaa aggtggaata
     2401 aatcgccacg acgggcttca tcccttcgca agccaaaccg ccggcaaagg taacggcgtg
     2461 ctgctcggca atgccgacat cgaaatagcg gtcggggaat cgttgttcaa actccaccag
     2521 tccgctgccc tcgcgcatcg cgggcgtgat ggcgatcaaa cgctcgtctg ccgccgcccg
     2581 gtcgcacagc catttgccga acacttgggt ataggtcggt ttggcggcag gtttgttttc
     2641 agacggcatt tgcgccgcgc tttctttggg caggttggcg acggcgtggt atttgacggg
     2701 atcgttttcg gcgagtttgt agccgttgcc ttttttggta atgacgtgca gcaactgagg
     2761 gcctttgcgg ctgcgcaagt ctttcaatac gtccaccaga ttttcgacgt tgtgtccgtc
     2821 cacggggccg gtgtagcgga agccgaagtt ttcaaacaaa gacagtgact gtttggcgtg
     2881 ttcggcttct tcggcaaggg ttttgatttt atgttcgact ttttgggcaa actccatcgc
     2941 gccgggtatt ttgtctaata ccttgcccgt ttgcgctttg acggtactca acagtccgtg
     3001 catatcgcgc acgacgttgc tggcaaggta tttgggcaac gcaccgacgt tgggggaaat
     3061 cgacatttcg ttgtcgttga ggacgaccag caaatccaca tccatatcgc ccgcgcaatt
     3121 caaggcttca aacgcctgcc ccgccgtcat cgcgccgtcg ccgatgatgg cgacgctgcg
     3181 gcggtcgctg cccaagagtt tgtctgccgc cgccatgccc aacgccgcgc cgatggatgt
     3241 ggaagaatgc cccacgccga acgcgtcgta ctcggactcg caacgtttcg gaaaacccgc
     3301 caaaccgcca tattggcgca tggtgtgcat ctggtttttc ctgcctgtca ggattttgtg
     3361 cggatagctt tggtgtccga catcccatac cagcttgtct tcgggcgtat cgtacacata
     3421 gtgcagggcg atggtcagtt cgaccgcgcc caaattgctg gcgaaatgcc cgccggtctg
     3481 cccgacagat tccagcagaa aggcgcgcaa ctcgccggca aggcgcggca gctgtttttt
     3541 gtccagacgg cgcaaatctt gcgggctgtc aatcaggtcg agtagggggc ttgggttcat
     3601 ggtgtgtctt ttttatgtgt cgtccgggtg caacggccaa ttatatatca agagcgtgcg
     3661 gctgacggct gattttgccg tatgtcattc gtcctgccgc ttggcgcgcg ggtgggcttc
     3721 gtcatacagg cgggcgatgt ggtcgaaatc gagcttggta taaatctgcg tggtcgaaag
     3781 gctgctgtgc ccgagcagct cctgcaccgc cctgatgtcg cgcgaagcct gcaacaggtg
     3841 tccggcgtag ctgtggcgca tcatatgcgg cgaaacgtgc ctgccgtcgc cgttttgcgc
     3901 cgcccattgc gccaaacgtt tttggatttg gcgttggctc aggcgcgtgc cgttcctgcc
     3961 ggtaaacagg gctttgccgt ccgatgccgt ctgacgcagc ggcagatagt ttttcagggc
     4021 ttccacgctt ttgccggtca gcggcacctg ccgctgcttg cgccctttgc cggtaacgtg
     4081 tacccacgcc tcgtccaaat agacatcatc tgcattcaag ccgtgtatct cgctcacgcg
     4141 caaaccgctg ccgtacatca gctcgaacag ggcgtgatcg cgcaccgcca gcgggtcgcc
     4201 gccgtccacg ggcaaatcca gcatccggtt cagccattcc tgcggcagtg ctttgggtac
     4261 gcgctcgggc tgcttcggcg gtttgatgtc ggcggtcggg tcggtatgca gcagaccgcg
     4321 tttgaccagc caggcgcaat actgccgcca agacgacagc ttgcgcgcca gcgtccgcgc
     4381 attcaaaccg cgctgcgaca gccgccgcaa cgccgccgta aaatcgcgcc gcgacaagcc
     4441 ctgcggcacg ccgccttcag cttcagacgg catttgtgcc aacagcgcaa acagttcttc
     4501 caaatcgcgc cggtatgccg ccactgtgtg ctccgacttg ccctcgcgca cgatgttttc
     4561 caaataagcg tcaaaatgcg ccgcaaaccc gtccaaaacc ataaccgccc cacacaaata
     4621 tcaaaaaaac agtgaaaaca ttatcataaa cgacacacca aaaccccgaa ctgcccaaaa
     4681 tccgacccgt ccgcccgccg ttatcgttaa cataaaatca atgagccgtt tatggttttt
     4741 tgccgcaaaa aacattataa tccgccttat ttacctattg cccaaggaga cacaaatggc
     4801 actcgtatcc atgcgccaac tgcttgatca tgctgccgaa aacagctacg gcctgcccgc
     4861 gttcaacgtc aacaacctcg aacaaatgcg cgccatcatg gaggcggccg accaagtcaa
     4921 cgcccccgtc atcgttcaag catccgccgg cgcgcgcaaa tacgcgggcg cgccgttttt
     4981 gcgccacctg attttggcgg cagtcgaaga atttccgcac atcccagtcg tgatgcacca
     5041 agaccacggc gcatcgcccg acgtgtgcca acgctccatc caactgggtt tttcttcggt
     5101 aatgatggac ggctcgctgc tcgaagacgg caaaacccct tcttcttacg aatacaacgt
     5161 caacgccacc cgtaccgtgg ttaacttctc ccacgcctgc ggcgtatccg tcgaaggcga
     5221 aatcggcgta ttgggcaacc tcgaaaccgg cgaagccggc gaagaagacg gcgtaggcgc
     5281 agcgggcaaa ctttcccacg accaaatgct caccggcgtc gaagatgccg tacgtttcgt
     5341 taaagatacc ggcgttgacg cattggcgat tgccgtcggc accagccacg gcgcatacaa
     5401 attcacccgt ccgcccacag gcgacgtatt gcgtatcgac cgcatcaaag aaatccacca
     5461 agccctgccg aacacccaca tcgtgatgca cggctccagc tccgttccgc aagaatggct
     5521 gaaagtcatc aacgaacacg gcggcaaaat cggtgaaacc tacggcgtgc cggttgaaga
     5581 aatcgtcgaa ggcatcaaac acggcgtgcg caaagtcaac atcgacaccg acctgcgcct
     5641 tgcctctacc ggcgcggtac gccgctacct tgccgaaaat ccgtccgact tcgatccgcg
     5701 caaatatttg agcaaaacca ttgaagcgat gaagcaaatc tgcctcgacc gctacctcgc
     5761 gttcggttgc gaaggtcagg caggcaaaat caaaccggtt tccttggaaa aaatggcaaa
     5821 ccgttatgcc aagggcgaat tgaaccaaat cgtcaaataa caggttgctt gtaaacaaaa
     5881 tgccgtctga accgttgttc ggacggcatt tgatttttgc ttctttgacc tgcctcattg
     5941 atgcagtatg caaaaaaaga taccataacc aaaatgttta tatattatct attctgcgta
     6001 tgactaggag taaacctgtg aaccgaactg ccttctgctg cttttctctg accgccgccc
     6061 tgattctgac cgcctgcagc agcggagggg gcggtgtcgc cgccgacatc ggtgcggggc
     6121 ttgccgatgc actaaccgca ccgctcgacc ataaagacaa aggtttgcag tctttaacgc
     6181 tggatcagtc cgtcaggaaa aacgagaaac tgaagctggc ggcacaaggt gcggaaaaaa
     6241 cttatggaaa cggcgacagc cttaatacgg gcaaattgaa gaacgacaag gtcagccgct
     6301 tcgactttat ccgtcaaatc gaagtggacg ggaagctcat taccttggag agcggagagt
     6361 tccaagtgta caaacaaagc cattccgcct taaccgccct tcagaccgag caagtacaag
     6421 actcggagga ttccgggaag atggttgcga aacgccagtt cagaatcggc gacatagcgg
     6481 gcgaacatac atcttttgac aagcttccca aaggcggcag tgcgacatat cgcgggacgg
     6541 cgttcggttc agacgatgct ggcggaaaac tgacctatac tatagatttc gccgccaagc
     6601 agggacacgg caaaatcgaa catttgaaat cgcccgaact caatgtcgag cttgccaccg
     6661 cctatatcaa gccggatgaa aaacgccatg ccgttatcag cggttccgtc ctttacaacc
     6721 aagacgagaa aggcagttac tccctcggta tctttggcgg gcaagcccag gaagttgccg
     6781 gcagcgcgga agtggaaacc gcaaacggca tacaccatat cggtcttgcc gccaagcagt
     6841 aaccattgtg aaaatgccgt ccgaacacaa taatttaccg ttcggacggc atttttgcgc
     6901 cataccgccc taggacacga cggcacggca ggcaagctga tttcactata taatgccgtc
     6961 tgaaccaacg agaaccatac catgcaagct gattttaacc gtcccgtcct ggccatcgat
     7021 accggtactt cctatttgtc gctcgcgctg cgcgccgacg gcgaaaccca cctgttccat
     7081 caagaggccg gcagccgcca atccgaactg attctgccgg aaatccgcac cctattccga
     7141 aatgcgggca ttaccgccgc cgatttgggg gcgattgttt atgcgaaagg ccccggcgcg
     7201 tttacgggac tgcgtatcgg catcggcgtg gcgcaaggtt tggcaacgcc gtttgatacg
     7261 cctttaatcg gcatccccac gctcgatgcc gccgcctcgc tgccgccgcc gcaaagctgc
     7321 atactcgccg ctgcggacgc gcgtatgggc gaagtgtttt atgcgtggtt cgacacgctg
     7381 aaccgccgcc gtttgagcgg ttatcaagtc ggtagggcgg cagacatccg gctgccggag
     7441 ggatgtgcct tttcagacgg catcggcaat gcgttcgcgc tggaaaaccg tccgcccttc
     7501 tcaggcaaac ccgatatgcc gactgccgcc gattttctca atctggcgga agaaggcggt
     7561 tttcccgccg tcgctgcggc acacgccgag ctgctctacg tccgcaacaa aatcgccttg
     7621 actgccaaag aacaggcgga acggagggcg ctcctgtgaa catccgccgc gccgtttatg
     7681 ccgattgcgc ggcactcgcc gcactcgatg ccgtctgcaa cccgtccgcg tggacgcaac
     7741 accaatttga gtccgcattg gtttcgccgt ccgaacaggt tttccttgcg gaaaaagacg
     7801 gcaggttggc cgcctttatc gtttggcaga acctgcccga cgaatccgaa ctgcacctga
     7861 ttgccaccgc gcccgaatgc cgccgccaag gaattgcgtc cgccctgctc gaatattggt
     7921 acgcacacct gcccgaaggc acgcaacgcc tgctgctcga agtccgcgca ggcaacaccg
     7981 ccgcacaggc actgtacgcg gcgcacggct ttaccgatgc gggcaggcgg aaaaactatt
     8041 accgtacagc cgacggtaaa accgaagatg ctgtcttgat ggagaaaata tgttaagcgc
     8101 gcgctacctc cacctgcacg aagccttggg tttgggcccg atgtggctga aacaggccgc
     8161 tgccgtcctg ccgcccaaaa acacacccgc aaccccggca caggcacgtc ctcaaaccgt
     8221 ccgcgccgcc ccgatccgcc cttcccaacc ccataacggt caggcgcggc tcgaaacgat
     8281 gaaagcgttg gaaaccgccg ccgtacctac gcgcaaaccc gcgcctgaaa ccgaaacgcc
     8341 tctgcccggc ctttcagacg gcatcgcccc tgttcccgcc gcttcgggca taaccaaact
     8401 tgccgtcgtc agcctttgcc caccgatcga ggatgcggtt tacgggcagc tgttccacgg
     8461 caaagcgggt gtcctgcttg acaacatact caaagccgta ggactggatg ccgcttatgt
     8521 acacaagacc agctgggtga aaaccgccgc cgtcggcaac ccgatgccgt ctgaacaggc
     8581 cgtcgcgaat gcgctgggtc aaatcgccag ggaactcgac ggctgccgtg cccccgccgt
     8641 ccttttcctc gggcaggctt ttgtccagcc tgaacggcaa acgatgattg aaactttgtg
     8701 cggcagccgt cccttcttca tcatcgacca tcccgcccgg ctgttgcgcc aacccgaact
     8761 taaagcccgc gcctggcagg tgttgaaaca gttgaaacgc gccttgcggc aaggcggcgg
     8821 cagttgaagc gcgccgcacg gggcggtaga atcgcaactg cgtcccaata tctgacagaa
     8881 agcacaaaat gaccgatttc cgccaagatt tccttaaatt ctccctcgcc caaaatgtct
     8941 taaaattcgg cgaattcacc accaaggcag gacggcagtc gccttatttc ttcaatgctg
     9001 gcctctttaa cgacggcttg tccacgctgc aactggcaaa attttacgca caatccatca
     9061 ttgaaagcgg catccaattc gatatgctgt tcggccccgc ctacaaaggc attattttgg
     9121 cggcggcaac cgcgatgatg ctggcggaaa aaggcgtaaa cgtcccgttt gcctacaacc
     9181 gcaaagaagc caaagaccac ggcgaaggcg gcgtgttggt cggcgcgccg cttaaagggc
     9241 gcgtgctgat tatcgacgat gtgatttccg ccggcacatc cgtacgcgaa tcgatcaagc
     9301 tgattgaagc ggagggtgca acccccgccg gtgtcgccat cgcgctcgac cgcatggaaa
     9361 aaggcacggg tgaattgagc gcggttcagg aagtggaaaa acaatacggc ctgcccgtcg
     9421 cccccatcgc cagcctgaac gatttgttta ttctgttgca aaacaacccc gaattcggac
     9481 agttcctcga acccgtccga gcctaccgtc ggcagtacgg cgtagaataa aaacaaagca
     9541 tatgccgtct gaaccgcctt acgcctcaga cggcatcaaa cctgacacac acgaggaaat
     9601 accatgcccg cctgtttctg cccccactgc aaaacccgcc tctgggtcaa agaaacccaa
     9661 ctcaatgtcg cccaaggctt cgtcgtctgc caaaaatgcg aaggaatgtt taaagccaaa
     9721 gaccatctgg caagcacgaa agaacccata ttcaacgatt tgcccgaggc tgtttcggat
     9781 gtcaaactcg ttcaccgcat cggcacgcgc gccatcggca agaaacagat ttcccgcgat
     9841 gaaatcgccg gcatcctcaa cggcggcaca acccagcccg atattccgcc cgcaaccgcc
     9901 gccacccctg ctgccgcacc gcaggttacc gtaccgcccg ccgcgcccgc ccgtcaggat
     9961 gggttcaact ggacgattgc aaccctgttt gcccttatcg tcctcattat gcagctttcc
    10021 tacctcgtca tcctatgatc gtgcccgacc tctttgtcgc ccacttccgc gaagccgtcc
    10081 cctacatccg ccaaatgcgc ggcaaaacgc tggtcgccgg catagacgac cgcctgctcg
    10141 aaggtgatac cttaaacaag ctcgccgccg acatcgggct gttgtcgcaa ctgggcatca
    10201 ggctcgtcct catccacggc gcgcgccact tcctcgaccg ccacgccgcc gcgcaaggcc
    10261 gcacgccgca ttattgccgg ggcttgcgcg ttaccgacga aacctcgctc gaacaggcgc
    10321 agcagtttgc cggcaccgtc cgcagccgtt ttgaagccgc attgtgcggc agcgtttccg
    10381 ggttcgcgcg cgcgccttcc gtcccgctcg tatcgggcaa cttcctgacc gcccgtccga
    10441 taggtgtgat tgacggaacc gatatggaat acgcgggcgt tatccgcaaa accgacaccg
    10501 ccgccctccg tttccaactc gacgcgggca atatcgtctg gctgccgccg ctcggacatt
    10561 cctacagcgg caagaccttc catctcgata tgcttcaaac cgccgcctcc gtcgccgtct
    10621 cgcttcaggc cgaaaaactc gtttacctga ccctttcaga cggcatttcc cgccccgacg
    10681 gcacgctcgc cgtaaccctc tcggcacagg aagcgcaatc gctggcggaa cacgccggcg
    10741 gcgaaacgcg acggctgatt tcgtccgccg ttgccgcgct cgaaggcggc gtgcatcgcg
    10801 tccaaatcct caacggagcc gccgacggca gcctgctgca agaactcttc acccgcaacg
    10861 gcatcggcac gtccattgcc aaagaagcct tcgtctccat ccggcaggcg cacagcggcg
    10921 acatcccgca cattgccgcc ctcatccgcc cgctggaaga acagggcatc ctgctgcacc
    10981 gcagccgcga atacctcgaa aaccacattt ccgaattttc catcctcgaa cacgacggca
    11041 acctgtacgg ttgcgccgcc ctgaaaacct ttgccgaagc cgattgcggc gaaatcgcct
    11101 gccttgccgt ctcgccgcag gcacaggacg gcggctacgg cgaacgcctg cttgcccaca
    11161 ttatcgataa ggcgcgcggc ataggcataa gcaggctgtt cgcactgtcc acaaataccg
    11221 gcgaatggtt tgccgaacgc ggctttcaga cggcatcgga agacgagttg cccgaaacgc
    11281 ggcgcaaaga ctaccgcagc aacggacgga actcgcatat tctggtgcgt cgcctgcacc
    11341 gctgaccgca acggaaagcc gccgcagaaa tgccgtctga accccgtttc agacggcatt
    11401 tccccg
//
LOCUS       DAXHRP010000052        11080 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.052, whole genome shotgun sequence.
ACCESSION   DAXHRP010000052 DAXHRP010000000
VERSION     DAXHRP010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11080
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.052"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..1287)
                     /locus_tag="ACFM72_001017"
     CDS             complement(<1..1287)
                     /locus_tag="ACFM72_001017"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFC6257599.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQS"
     gene            1365..2333
                     /locus_tag="ACFM72_001018"
     CDS             1365..2333
                     /locus_tag="ACFM72_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257600.1"
                     /translation="MKLTLAIPSLNLDEDETRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDSLHGSSQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAYLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     IYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(2534..4000)
                     /locus_tag="ACFM72_001019"
     CDS             complement(2534..4000)
                     /locus_tag="ACFM72_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC6257601.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKSPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFEDRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(4242..6284)
                     /locus_tag="ACFM72_001020"
                     /pseudo
     CDS             complement(4242..6284)
                     /locus_tag="ACFM72_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(6703..6948)
                     /locus_tag="ACFM72_001021"
     CDS             complement(6703..6948)
                     /locus_tag="ACFM72_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257602.1"
                     /translation="MLKSIEFNSHIRNRLAAYLKGRGLDFQTAMREEKGNKEIASIIH
                     GGLPVLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            7060..7488
                     /locus_tag="ACFM72_001022"
     CDS             7060..7488
                     /locus_tag="ACFM72_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HFC6257603.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYV
                     RLSDMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQNYSNTFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            7500..7976
                     /locus_tag="ACFM72_001023"
     CDS             7500..7976
                     /locus_tag="ACFM72_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HFC6257604.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GKRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKRRYPVRWGGSLFEVD
                     VFLGENAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(8326..8814)
                     /locus_tag="ACFM72_001024"
     CDS             complement(8326..8814)
                     /locus_tag="ACFM72_001024"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HFC6257605.1"
                     /translation="MLKITLIAACAENLCIGADNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTSYAFVHYL
                     RY"
     gene            complement(8882..9937)
                     /gene="aroG"
                     /locus_tag="ACFM72_001025"
     CDS             complement(8882..9937)
                     /gene="aroG"
                     /locus_tag="ACFM72_001025"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HFC6257606.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            complement(10099..10326)
                     /locus_tag="ACFM72_001026"
     CDS             complement(10099..10326)
                     /locus_tag="ACFM72_001026"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257607.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAARCPVPD
                     CRGNGKTDVPCGFARMNGGYCFYQSVSFSLE"
     gene            complement(10386..10547)
                     /locus_tag="ACFM72_001027"
     CDS             complement(10386..10547)
                     /locus_tag="ACFM72_001027"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257608.1"
                     /translation="MDFQSKVFMLGNAVFFLIADGGFAFRVAGKDFVFALAVRLGNIG
                     YRNGGYGCK"
     gene            10635..10892
                     /locus_tag="ACFM72_001028"
                     /pseudo
     CDS             10635..10892
                     /locus_tag="ACFM72_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233493.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10874..>11080)
                     /locus_tag="ACFM72_001029"
     CDS             complement(10874..>11080)
                     /locus_tag="ACFM72_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6257609.1"
                     /translation="LDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIEKVWANIK
                     RYLQTVLSDYARFDDALLSYFDFN"
BASE COUNT         2512 a         3137 c         2696 g         2735 t
ORIGIN      
        1 cgattgcgac acggtaaccg gtatgccgcg caagcgcgca agcagcgcgt ccgccttctg
       61 tttctgcgcg gcaaacgccg ccttgtccgc ctgcgtcaat tcgggtgtcg gcaatgcgac
      121 tgaaacagga ttgacgggct gcccgttgat gcgcgcctcg taatgcaggt gcggcccggt
      181 cgaacgccct gtcgaaccga caaaaccgat gacctcgccg ccgcgcacat tgccttgtgc
      241 ctgcgaaaac gcgctcaagt gcgcgtacag cgtttccaca ccgttggcgt ggcgtatcat
      301 caccgcgttg ccgtatccgc ccttccggcc tttaaaggta atcacgccgt cggcggaagc
      361 cctgaccggc gttccctgcg gtgcggcata atcgatgccc gtgtgcagcc gccaagtgtg
      421 caggatgggg tgcatacggt agccgaacgg cgaagaaatg cgcgtataga ccagcggctc
      481 gatgttgaag ccgccttttt cctgcaacac cctgccgtct tcatcataat aattgccgcc
      541 ccctccgcct tccttgtccg aacggtaata gaacgcctga tgccttgtgc cgcccttaac
      601 gacttcagcc gccaaaatat cgcccgccgc cacctgctgc ccgtggaaat acaggctgtc
      661 gtacatcagg cgcacggcat cgccttcctt caaaccgtca aggctgaagc ggccggcgaa
      721 aatcccgctt aaggattcgc ggatttcgac gggcacttcc gcccgcgcca gcgaaccgcg
      781 cgccgacgtt ttgaccacga ccgaacgcag cgtcggcaaa accttcatat ccgcctcaga
      841 agccgaccgc cgccatatgc cgcctttttt ttccaaagcg accagattgc gctcgccgtc
      901 ttcgtcggta aaaaactgca cttcgcgcgc gccgccgtcg ccgccgacca aaacatgaac
      961 cgactggtcg gcacgcaaat gccgcaaatc ggcttcgccg ccatattttt ccgttattcg
     1021 ggcaatttcg tcccgcgcca tacccgaacg cgccagcacg tccgccagcg agtcgcctgg
     1081 ctgcaccgcc tcctgcaccc aatatgccgt ctgaacaccg ctgccgcccc aagacagcgg
     1141 cggcagtttt tgttccacgc gctgcggtct gacgcgctcc gtcctctctg tcgaagcaat
     1201 gtatgccgcc gacaccaaaa taatcgaaac ggcaagcgcg cgcagcgcgt atttccgatg
     1261 ttttgccgaa agtgggaaga cagccatatt gttccttttt gacggcgttt gcgccgaatc
     1321 ctctataatg ttgcgcctga cctgcatttc tgaaacgtca aacgatgaaa ctcaccctcg
     1381 ccattccctc gctcaatttg gatgaagacg aaacccgaat acctctctgc ctgcccgcct
     1441 tcaacaaaat cctgcaatac ggctcgctgc accgccaaag ctgcacggct tcggcatttt
     1501 acgcgcgtta tttgtggtgc ggcagactgg cggaacgcgc ggcacaaagc ctgaatatgc
     1561 cgtctgaagc cgtcgcgctc gccacgcccg tctggcaaaa gatggggatg catcaggcaa
     1621 atgtgctaac ggcggaatat ctgaacgtcg gtacggatga agcggaacgg ctctgccgcg
     1681 acctgtcggc gttttacggc gacattccat ggcgtttcgt tcccgtcctg cccgaattat
     1741 ggctggtttc ccttccttgc gcgtaccgct ggggcgcgaa gcccgttttg gacttgggcg
     1801 gattgttggg cgcggacgat cagccggacg gggaagacgc gttggaatgg ctgcgcgtcc
     1861 aaaccgaaat ccaaatgtgg ctggcggcgc accccgtcaa ccataaccgc aagaaacgcg
     1921 ggctgcccga gttgaacggg ctgtggcttt gggacagtct gcacggaagc agtcaaggcg
     1981 gcacgctttt cgccgatacg gtttggagcc gtttccaccc cgaccgccgc gcattgcccg
     2041 acaacttccg cgcctatgaa gaaacggcgg catacctacc cgacacgcac catatcctgt
     2101 ttatggacga tttgcgcctg accgccctga caggggacag ggagcggtat gcggcaatat
     2161 tgcagcagtg ggaagaacgc tggttcgcac cgatctacga agccgtccgt accggcaaaa
     2221 tcaaacggct ggacatcacc acggacggac aacacggcgg tacgctgacc ttcaaacccg
     2281 ccgacaggtg gaaattttgg cgcggcgcga aaacctttga cggaatctgg tgaacccgcc
     2341 tgccgcaacc gcgacaatgc cgtctgaagc ccgaatcggg tttcagacgg cattttacct
     2401 cgcatcgccg ttatgccgga aaaaccggaa tgcgtttccg cacacgcggc ggcacgcaaa
     2461 gcaccgcccg aaagccgccg atgcccgccg tgataccgcc gccggcaggg tttcctccga
     2521 aaaggaacag caatcagaac gttttattaa actcgacaaa cgcccgattt ttctcatatt
     2581 cgttgaacac atcgttactc cacgtttcgc ggtgcgacag cgtcaggcgc ggcgtgatgc
     2641 ctttgaaatg caatgcccgg tgccaaaggc tcaaggatgt gttcaattct ttatccctgc
     2701 gcctttcccc tttaaaaccg ctgaaaaagc cgggtttttc ataatgccgt ttcgccgcgc
     2761 cgaggcgcaa cagcgaagac aggccgctgc cgccccattc ctgcccccag gcaaagcgca
     2821 ggccgtaacg gttgaaattg tcgccccggt cggcggggtt gcgctcgcgg taaaaatcca
     2881 aaccgcccat ccaatattgg cgcgcattcc ggtaaaacac cagcgaattg gaaatttgca
     2941 aatgggtatt gtcggaacgc gcccggcgcg tattcttcaa acgcccccac tccgccgaag
     3001 acaacgtttg ccatttcggg gtttgccaac ggttgaaata aaggcgtgcg ccgttggtgt
     3061 aagaataagc gtcgttgccg taggtgcggc gttcgtggaa cactgccagc ccggcatctt
     3121 tgcgccggtc ggcaaaaccg atgccgccgg aaacgcctgc cgtcatatcg ttgaatttct
     3181 tattccccgg ataaaccctg ccggacacgt cgccgcccgc cgtcgtgtac cagccgtttt
     3241 tcagcgacca ttttttctcc gcgccgagcc ggtaattgac cgccgtgccg tccacctgtt
     3301 tcgggaaagt ccatttgccg tactgctgcc gtttcggggc ttggttgata ttgtgttcgc
     3361 gggtaacgct gaagccgccg tttaccttcc acgcatcgcg ttcgcgcaat gccttgcggt
     3421 acagctcgac ctgctccatc agctgcggcg gcaggttttc cgccttcagg cggtcgaact
     3481 ggtctgccgc cgcctcgttc tgcctgtctt caaacaatgc tgccgccaaa cgcatacgga
     3541 cggcgggcgc gtcgggttgg gcggcaatca attcccggta atgggaaatc gcctccttca
     3601 ccctaccgtc tgcctgcgcc aaaatccctt gtgcataaag tgccaacatc ttatcctgct
     3661 gcgcctgttg taggtaaatc ggcaaaataa cgcggatacc ggcaatattg tttgagacca
     3721 ctgcggaata catcgcgcgg gacaacaatt cgggactttt cagcagggtt tctccgtcaa
     3781 tctgcaaaac ttttcctttt tcccgcacct gccccggtac cttctccctg tcgattggtt
     3841 tgacctccgc ttcatgaagc ctgaactcgg gacggcttct caaatccggt tcgcgcggtg
     3901 tttcttcggc atatgccgca cttgccaata aaggcagcag cagcatccat ctgtttcgtg
     3961 caggcataaa tgtcttccca caaaaataaa aaataaccat tatcaatcgg cggattgtat
     4021 cagtttttta tgccgctgtt ccaaaccctg ccgcccgatg ccgcgacaat gccgtctgaa
     4081 gccagaatcg ggtttcaaac ggcggcaaaa aaccggcggt tttccgccgg tttcatcatt
     4141 atgccccgcc cttcggggca gcagggttcg gattggtttg cggggcggcg tgcggtgccg
     4201 tgccggtgtg ccgcctgtac gtcaaaacat ttcccgacgc atcaaaacag ccatttgagc
     4261 gacaatgcgg cttctttgtc gccgtccgtc cttttgccgt atccgatgcg tgcggacata
     4321 tgacctttcc aaccggcttc aatgccgaac cgcccttcga gcgccgtcct gcctgccagc
     4381 gtctgttttt cgccgtccat ttccacgccg aaagattttg acctgtgcaa aacattaaaa
     4441 gcggcaaaag gctgaagatt gacaccatta cgcaaagcaa aacggttttt tgcccgaatg
     4501 ccggcgcggc tttgccactg accgctgccg agcagtccga cccccgtccc ctcgctgtcg
     4561 gtaaagccgc cgtttacgcc caagtaggta aactgcgcct gcggttgcag gtaaaaccgc
     4621 acattattgc cttttccgac aactccttcc gccacaagcg tgttgtagcc gccttcgaca
     4681 gaagccgtcc aacctttggt tttgtagcgt tccgcacggt tttcatcatt gatgcggtgt
     4741 ttgaaacgtt ggtattgcaa ccagccgtcc aaatacgcac ccgtttgttt atcgcgcaac
     4801 tgatgccacg cagcataaac acccccgcca taaccatgca aatcactgcc tgccgcaccg
     4861 cctttgctgt taactgatgc gtgctggccg accctgccgc ccatcacgcc gattgccagc
     4921 cggctgcctt cattttgccg tacaaacacc tcgccgccga tttgcacgcc tttgcgccgc
     4981 ccgtccgcag ccgcgccacc ccgtatattt tgacgggacg gatcggcggc atacacgtcg
     5041 tcgcccctgt cggcggcacg cagcccaaac aaagtatttg ccgcataagc ctgttgggca
     5101 tataaaaccg cttccgcctc ggggatagcc aaacgctgca cgcccaagca aaatccgcct
     5161 tcgcattgct tgagcaataa ttcgtacagt ccctgccggt aattttgttt aaacgcaaac
     5221 gaattagagt ctgccttttc cgccgcaatc agtttgcgcc cgtcgagcgt tttcagattt
     5281 tccggccggc gttccaaaac cacgccggat tttccgctga ctttgtcttc aaaggtcagg
     5341 gcgggtttgt ccgactcccg cacgtcgtag ccgaacagga aatccgcgcc gccctgatac
     5401 gctttatgga cggtcagttt ttcatctttc gtgttcaggc ggatccgggc attatcggaa
     5461 gtttccagca tatggatgtc ggaatggcgg cgcggttccc aaagggaatc tttcagcgtc
     5521 atcttggtca gttccaacac ctgtccggcg acgtgggatt tgttttcgat tttgacgtgc
     5581 agtgttttat tgaagatgtt gttgagacta gtctgtgatg tattactatg aggagtgagt
     5641 acggaatctt ctaccaattt attaattaaa tcgggcatcg tctgtttgag cgtactaaat
     5701 tttgttccaa actgtgctat atacgcctcc tcagtccgtt ttttattttc tgcccaagct
     5761 tccggtcttg ttttgtataa atcctgtaat tgcttcttaa ccgcatcctt taaatcagcc
     5821 ccatacttct ctgtaatata ttttttgaca acgggcatat tatcgacggc gaggatgccg
     5881 ctattgtaat ttttaccttg gatattgatt tcgtcatacc catattcgga tgaattttga
     5941 tcggttttac cgctggaaaa ataatgggaa gtgccgggtt tcggcttgtc tgaaaatgaa
     6001 aaatcggcat cgtcgccgat tttggtagaa cgagtatttg aaccaagctg agctctgaac
     6061 ataccgaagc aatcaaaaga tatgctgcac ggaccgcgcc aaacgtggga atctctgttt
     6121 tccgccgctt ctaaaatgaa tcgcggaaga acttcaggat catattcatc cgcaccccaa
     6181 gcatatggcg tgcaaaacag cgataaaaca gataatgtta atagattaac ccgaccgctt
     6241 gcttgcttgc ttgcttgctt gcttgcttgc ttgcttgctt gctttcagtg tcatgagaaa
     6301 ttttcctttg tcaagtgtta aaattataat gattatatac tacattatac tacatcgcaa
     6361 tgaaaaatca ggaaaagcaa aaaaccctcc gccgtcattc ccgcgcaggc ggaaatctag
     6421 aattttaatg cggcaagaat ttatcggaaa aaactgaagt ttaaagacct agattcccgc
     6481 ctgcgcggga atgacggttt agaaatcacc cgaaacgaga aaaagaaccg aaaccgaaca
     6541 agccggatta ccgcctgcgc gggaatgacg gctcaaaagt tacgaaacga aaaataaccg
     6601 aaaccagaca agtcggattc ccgcgcgggc gggaatgacg ataagcgtaa tttcaatctg
     6661 ccatattgtc ttttcacttg cctgaaaaca gatttcagcc gcctatccct gcatccggcg
     6721 gctgatgtag tcggcaatca aatcccgctt ttcccaaaaa aatttctgca ttttttgttc
     6781 ggaatacagt ttgcgaacca gtacgggcag gccgccatga ataattgagg caatttcttt
     6841 gttgcctttt tcctcccgca tcgccgtctg aaaatccaaa cccctgcctt tcagatatgc
     6901 tgcaaggcgg ttgcggatgt gggaattgaa ttcgatggat ttgagcattt tgcctccgtt
     6961 ttgcggtaag gatttattcg atttgtttat ccgcctgatt ttatcacgtt tcccaagcgg
     7021 tttgcctgta caataccgct tttcggcagg gtgtgggcga tgatgttttc ttggttcaag
     7081 ctgtttcact tgttttttgt catttcgtgg tttgcagggc tgttttacct gccgaggatt
     7141 ttcgtcaata tggcgatgat tgatgcgccg cgcggcaatc ccgagtatgt gcgcctgtcg
     7201 gatatggcgg tgcggctgta ccgttttatg tcccctttag gtttcggtgc ggtcgtgttc
     7261 ggcgcggcga taccgtttgc cgccggctgg tggggcagcg gctgggtaca cgtcaaactg
     7321 tgtttgggct tgatgctttt ggcttaccag ttgtattgcg gcgtgctgct gcgtcgtttt
     7381 cagaattaca gcaatacttt ctcacaccgc tggtaccgcg tgttcaacga aatccccgtg
     7441 ctgctgatgg ttgccgcgct gtatctggtc gtgttcaaac cgttttgacg gagcatctta
     7501 tgccgataga aatcgaacgc cgttttttga ttggaaacga caactggcgg caatacgccg
     7561 atgagccgct gctgttgagg cagggttatc tgtctgttga aaaagaacgc accgtccgtg
     7621 tccgcattgc cggaaaacgg gcgtggctga cgctgaaagg ctatatttcg gaaatcagcc
     7681 gcagtgagtt tgaatacgaa atcccgcttg ccgatgcgga aaagatgatg gaaacgatgt
     7741 gcccgtttaa gatggaaaaa cggcgttatc cggtcagatg gggcggcagc ctgtttgaag
     7801 tcgatgtttt ccttggcgaa aacgcgcctt tggtcgtcgc ggaaatcgag ttgcccgacg
     7861 agaatgccga ttttgaccgt ccggactggc tgggacggga aatcactgcc gacggtatgt
     7921 ttaccaatgc ttatttgagc aggcatccgt tctcaagctg gaaaaatgcc gtctgaaacg
     7981 gcttcagacg gcattctccg acaaccatcg caaatccaaa gacagcctct atatccttat
     8041 ttctgctttc tttgttccat tattcccaat aaatccccat aacctaaaat ctcgtcattc
     8101 ccgcgcaggc gggaatccgg ttctttaaac ttcggttttt tccgataaat tgctttagct
     8161 tttcgtttcc ggattcccgc ttttgcggga atgacgatgg aagattgttg ttatttcgga
     8221 taaattaccc taactttaaa atcccggatt cccatcttcg ggggaataac aatattttct
     8281 atttcagccc atcatttgcg ggggatttta tagagagttt atatttcaat atctcaaata
     8341 atgcacaaaa gcatagctcg tgcctttgct gctgacacgg cgttccgtcc gctctgcttc
     8401 tttccaatgc gtccggtcta ttgcggggaa aaatgcatct ccttccacag acaaatccac
     8461 ttcggttatc cgcaaatcgg tcgccaatgg catcgcttgt ccgtatatct gcgcgccgcc
     8521 cataatgacg gcttcttccg cgcctgcgca caatgccaat gccgcctcca aacttgccgc
     8581 cgtttccgcg cctgccgcgc aataatccgc ctgccggctg atgacgatgt tcctccgtcc
     8641 gggcaggggt ttgacgggca gggattccca cgttttccgc cccataatga cgggtttgcc
     8701 caaggtatag gctttgaaaa atgcgaaatc ttcggggatg tgccaaggca tagcattgtc
     8761 cgccccgatg cacaggtttt ccgcacacgc cgcaattagg gttattttga gcatatttcc
     8821 tccacaaaaa tgccgtctga acgcttcaga cggcatttta tgacattccg tgtcaaaaat
     8881 ctcaaccggc gcgcgccata cgttttttgt ttgcacctgc caacaatgcc aacagttctt
     8941 cagtcgcgcc ccaaccgata cacgcatcgg taatgctttt gccgtacact tccggcttat
     9001 cctgtctgcc ttcgaccaaa tggctttcca ccatcacgcc cataatattg ctcccgtcct
     9061 gttccaattg ggcagcaata tcttgtgcca cttccatctg ccgggtgtaa tccttgcggc
     9121 tgttggcgtg gctgcaatct atcatcagct tatcggttac ccctgccgca cgcagttgtt
     9181 ccgccgcctc gctgacgtgt cccgcatcat aattcggctc ttttccgccg cgcaaaatga
     9241 catgacagtc gggattgccg ccggtatgga caatggcgga atgtccggcc ttggttacag
     9301 acaagaaatg atgcgaatgg ctcgccgcac cgattgcgtc gatggcaatc ttcaaattgc
     9361 cgtccgtacc gtttttaaag ccgacggggc aggacagccc gcttgccaat tcgcggtgaa
     9421 cttggctttc ggtcgtccgc gcaccgattg ccccccaaga aatcaagtcc gcataatatt
     9481 gcggcgtaat catatccaaa aactcggtag aggcaggcat acccatattg ttcagcgaca
     9541 acaacaggct gcgcgcctga cgcaaaccga aattgatatc gaacgtaccg tccaaatgcg
     9601 ggtcgttaat caaacctttc caacccaccg tcgtcctcgg cttctcgaaa taaacgcgca
     9661 tcacaatcaa aagctcgttt tcatactgct tgcggagttt caacaaacgc tccgcatatt
     9721 ccaacgccgc tttcggatcg tgaatcgaac acggcccgat aataaccaac agccgcttgt
     9781 ccctaccgtg aaccaaatcg gaaatttcct gacgggtgcg gtgaaccaag cccgaagcct
     9841 ctttggaaat cggcagctcg taaagatggg caatcggcgg cagcagttct ttaacttctt
     9901 taatcttaat atcgtcagtg gggtaatggt gtgtcatctt gcatctttcc tgatggtttt
     9961 ttatacgcgg cttaggttac atcgtttacc ttacacaaac aagtgcaaca tattactaca
    10021 aagctatttt atttcaaaat aactgatata tcttttttca tagattttaa atttcatatt
    10081 tttaatattt taggaatttt attccaaaga aaaagaaaca gattgataaa aacaataccc
    10141 gccattcatt cgggcaaaac cgcacggaac atccgttttc ccgtttccac gacaatccgg
    10201 tacaggacac ctcgctgccg attccgcctg cacatccggc aaaatttcat acgcaaggaa
    10261 aatgttgaaa acaaaaagaa ctaattgctt gaaaaaagat ttaattggaa tgcgggtatt
    10321 tcccacactt tctccattta tttatcctca ttataaaaac atgaaaaaaa accctgcttg
    10381 cactcttact tgcaaccgta tccgccgtta cggtagccga tattcccgag tctaacggca
    10441 agggcgaata caaagtcttt accggccact ctaaaggcaa agccaccgtc ggcgataagg
    10501 aaaaacaccg cgttaccaag catgaaaacc ttgctttgaa agtccatggc gaaatccgcc
    10561 aagatttggg ggatggataa tccctgaccc ccttggcgga tgcatatgca gatttgcgtg
    10621 gcaaaaccaa agtgatgacg acccagatgg gtgcttcccg cgatgtcagc aaaagcacca
    10681 aaggttggag tgtcggtatc ggtctgaatg taggcaaaca gttcaccgac agcgtcagtc
    10741 tcgagtttga tccatactag cgtcacaaaa caatctgcaa atcccgtgag attgtcttgg
    10801 acggctacag aaccaaaatg ggctgctcca aatccaacga gtacgacttc cgcgtaaccg
    10861 caacgttcta tagtcaatta aaatcaaagt aggacagtag tgcatcgtca aatcgggcgt
    10921 aatcagacaa aacggtttgc agataccgct taatattcgc ccacactttc tcaatcgggt
    10981 tgagttcagg tgaataaggt gcaagaggca ataccttatg tcccaatttt tccgccattt
    11041 cccgtaagac acccatacgg tgaaatcgcg cattatctaa
//
LOCUS       DAXHRP010000053        10861 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.053, whole genome shotgun sequence.
ACCESSION   DAXHRP010000053 DAXHRP010000000
VERSION     DAXHRP010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.053"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(32..235)
                     /locus_tag="ACFM72_001030"
     CDS             complement(32..235)
                     /locus_tag="ACFM72_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HFC6257610.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(213..446)
                     /locus_tag="ACFM72_001031"
     CDS             complement(213..446)
                     /locus_tag="ACFM72_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC6257611.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            986..4420
                     /gene="dnaE"
                     /locus_tag="ACFM72_001032"
     CDS             986..4420
                     /gene="dnaE"
                     /locus_tag="ACFM72_001032"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HFC6257612.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLVAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPGQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLEKAMEAEPQIQELIEVEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDLPRWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPTKLDR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLS
                     SHQLPDTPRIPLQLSYANEKVSGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            4463..4717
                     /locus_tag="ACFM72_001033"
                     /pseudo
     CDS             4463..4717
                     /locus_tag="ACFM72_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4854..5786)
                     /locus_tag="ACFM72_001034"
     CDS             complement(4854..5786)
                     /locus_tag="ACFM72_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC6257613.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEIPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMNNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFAAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLDGIDVCLNIGALERGSGCKRREERDMAGLSERMAAELDRHG
                     AAVFFREYPNADHGNVSFYSLTDCVEYLRKAWQR"
     gene            complement(5856..7970)
                     /locus_tag="ACFM72_001035"
     CDS             complement(5856..7970)
                     /locus_tag="ACFM72_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HFC6257614.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTEGLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVRKRPTKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRRETFYAAADWDINPDTVLGAGYLYQQRRLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMHSHDVFADLKHYFGNGGYGKVGMRYSDRKADSNYTFAGSKLNNTG
                     QADVAGLGTDIKQKAFAVDASYSRPFALGNTANEFVIGADYNRLRSTNEQGRSTLSKS
                     VALDGFRALPYNGILQNARAGNKGFNHSVTEENLDETGLYAKTVFRPLEGLSLIAGGR
                     VGHHKIESGDGKTLHKASKTKFTSYAGAVYDIDGSNSLYASASQLYTPQTSIGTDGKL
                     LKPREGNQFEIGYKGSYMDDRLNTRVSFYRMKDKNAAAPLDSNNKKTRYAALGKRVME
                     GVETEISGAMTPKWQIHAGYSYLHSQIKTASNSRDEGIFLLMPKHSANLWTTYQVTSG
                     LTIGGGVNAMSGITSSAGIHAGGYATFDAMAAYRFTPKLKLQINADNIFNRHYYARVG
                     SESTFNIPGSERSLTANLRYSF"
     gene            8130..8789
                     /locus_tag="ACFM72_001036"
     CDS             8130..8789
                     /locus_tag="ACFM72_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC6257615.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRTLLEMPSETAVADITRTYSAHYLNPNNRNMSLFPDALPCLDKLKAQ
                     GYWLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGLDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLAQHY
                     A"
     gene            complement(8877..9845)
                     /gene="ispH"
                     /locus_tag="ACFM72_001037"
                     /gene_synonym="lytB"
     CDS             complement(8877..9845)
                     /gene="ispH"
                     /locus_tag="ACFM72_001037"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HFC6257616.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(9874..10401)
                     /gene="lspA"
                     /locus_tag="ACFM72_001038"
     CDS             complement(9874..10401)
                     /gene="lspA"
                     /locus_tag="ACFM72_001038"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HFC6257617.1"
                     /translation="MVLFYRLLKNMSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQ
                     YRERVNVIPSFFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEF
                     ATLGKTGAAMIIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLA
                     VLDNIVHRKTQEEKY"
BASE COUNT         2478 a         3091 c         2854 g         2438 t
ORIGIN      
        1 tgttaattca ctatatcaag ccgaaccgtt ttcagacggc atcgtccgac caacccgctt
       61 ctttcaattt ccgccgttgc gcgtcgtagc gggccttatc cgcccaataa atcgtctgaa
      121 tacacgcctc gccgcagtcg ctgccgcagc attcccacga ctcgggtcgg acgggttcgt
      181 ctaaaagcgg ctcgcccaaa agggcttcgg ctttatgctt cagggtcata tccatcggcg
      241 atttccaagc gcgcaccgtc aaactcgatg acttcgccgc cgcgtatttt ggcggtttta
      301 cgggtttcgg tttcgccgtt gcgcgacacc aacccttcgg caatcaacgc cttcgcctgt
      361 ccgccgcttt cggcaagtcc ggccaatttc aagaggtcgc acagggcgat gtattcgttg
      421 tcttcgagat agacggtggc ttccataatg ttcccttgca gaaagaggcc gttattgtag
      481 cacctgccgc cgccgtaccc aaaattaccg caaaacaggc agcacatccc gccccgcctg
      541 ttccgtaaaa atgccgtctg aaaccccata tgccgtcatc cgatcaaaga aatcctgccc
      601 aacagcaggc tgcaaatcct gttccccgac gaatccgcat tgacgctgat gcacatcctc
      661 aaacacgaac tgcccgatac actggtcatc ggcatcagcc atcaaaacga aatcaaaaac
      721 ctgtttgaac gtaaaattaa tttaactgct tgccatccgt ccgaataagg tatatagtta
      781 tttataacta gtttgatagt tctttatatc tatcaatact ccttgggaag cctccaccac
      841 acggtaggag gcattttttt gccgtcgtaa aagctcaaaa acatttgcag gtcatgccgt
      901 ctgaatccga aacagcatta cctacaccgc catctaaaga caaccctgct acaatacgcc
      961 ttttattgtt cacgccgatt ttgccatgac cgagccgacc tacatcccct tgcgcctgca
     1021 taccgagttc tcaattaccg acggtatggt gcggattaaa aaactggttg ccaaagcgca
     1081 ggaatacggt ttgcctgctt tgggcatcag cgatttgatg aacgaattcg gcttggtgaa
     1141 attctataaa gcctgccgcg gcgcagggat taaacccatc ggcgcggcgg acgtgtggat
     1201 aggcaatccg aatgcgcccg acaagccgtt tcgcgccatg ctgattatcc gcaacgatgc
     1261 gggctatctg cgcttgagcg agcttctgac ggcggcttat gtcggcaaag accgcaatat
     1321 ccatcatgcg gaactcaatc ccgaatggct ggaaaacggc gacaacagcg gcttgatttg
     1381 tttgagcggc gcacattacg gcgaagtggg cgtgaatctg ttgaacggca atgaagacgc
     1441 ggcgcgtgcg gcggcgttga aatatgcggc atggtttccc gatgcgtttt atttagagct
     1501 gcaacgcctg cccgaacgcc ccgaatggga ggcttgcgtt tccggcagcg tgaagctggc
     1561 ggaggaactg ggtttgccgg tggtggcgac ccacccgacg cagtttatga gcagcgatga
     1621 tttcaacgcg cacgaggcac gggtgtgtat tgcgggcggc tgggtgctga cggacaaaaa
     1681 acgtccgcgc gatttcacac cgggccagtt tttcattccg ccggaaacga tgctggagcg
     1741 tttcgccgat ttgcccgagg ccttggaaaa cacggtagaa attgccaaac gctgcaatct
     1801 gcacatcaca ttgggcaaaa acttcctgcc ccttttcccc acgcccgacg gtttatcgcg
     1861 cgatgactat ctcatcaaac tctcaaacaa gggcttgcag gaacgcatgg ttcagcttta
     1921 tcccgacgag gcggagcgtg cggcaaaaat gccggaatat caggaacgtt tggattttga
     1981 gctgaacatc atcatccaga tgaaattccc cggctatttc cttatcgtac aagactttat
     2041 caactgggcg aaaacgcacg gctgtccggt cgggccggga cgcggttcgg gcgcgggttc
     2101 gctggtggcg tattcgctga aaattaccga cctcgacccg ctgaaatacg cgctgctgtt
     2161 tgaacgtttc ttaaaccccg aacgcgtctc catgcccgac ttcgacgttg acttctgtca
     2221 ggcaaaccgc ggccgcgtga tcgaatatgt gcgcgataaa tacggcgctc aggcggtcag
     2281 ccagattgtt accttcggca cgatgtcgtc caaagcggtc atccgcgacg tggggcgcgt
     2341 gttggagctg ccgtttatgc tgtgcgacaa actgtccaag ctgattccgt tggaagccaa
     2401 caaacctctg agtttggaaa aagccatgga ggccgagccg cagattcagg aattgatcga
     2461 ggtggaagaa gcggacgaac tgattacact ggcgaaaaag ctggaagatt tgacgcgcgg
     2521 tctgggtatg cacgcgggcg gcgtgttgat tgcgccgggc aagatttccg attacagccc
     2581 cgtgtatcag gcggatgaat ccgcctcgcc cgtatccatg tacgacaagg gtgacgtgga
     2641 agacgtgggc ttggtgaaat tcgacttttt gggtctgcgc aacctgacca ttatcgaaat
     2701 ggcgcagaac aacatcaaaa acaccaccgg cgacatcatc gatgtcggca aaattcctct
     2761 cgacgaccaa gccgcctacc aaatcttccg agatgcgaac accaccgccg tgttccagtt
     2821 cgagtcgacc ggcatgaaaa aaatgctgaa aacggcgcac acgaccaagt ttgaagaact
     2881 gattgccttc gtatcgctct accgccccgg cccgatggac aacatccccg acttcgtcgc
     2941 gcgtatgaag gggcaagaat tccaatatat ccatccgctg ctcgagggca tcctcgcgcc
     3001 gacctacggc attatggtgt atcaggaaca agtgatgcag gcggcacaga ttatcggcgg
     3061 ctactcgctc ggcggcgcgg acttgctgcg ccgcgcgatg ggtaagaaaa agcccgaaga
     3121 aatggtgaaa caccgcgaaa tcttcgccga aggcgcggca aaacaaggca tttcgcgcga
     3181 aaaatccgac gaaatcttca actatatgga aaaattcgcc ggctacggtt tcaacaaatc
     3241 ccacgccgcc gcctacgccc tgatttccta ccagaccgca tggctcaagg cgcactaccc
     3301 cgccgaattt atggcggcga ccatgtcgtc cgaattggac aacaccgacc agctcaagca
     3361 tttctacgac gactgccgcg ccaacggcat cgagttcctg ccgcccgaca tcaacgaatc
     3421 cgactaccgc tttacgccgt atccggacat gaaaatccgc tacgcgctcg gcgcgattaa
     3481 aggcacgggc gaagccgccg tcgaatccat caccgccgcg cggcaaagcg gcggcaagtt
     3541 taccggcctg ttggacttct gcgagcgcgt cggcaaagaa cacatgaacc gccgcaccct
     3601 cgaagccctg atacgcggcg gcgcgttcga cagtatcgaa cccaaccgcg ccatgctctt
     3661 ggcgaacatc gacctcgcta tggacaacgc cgaccaaaaa gccgccaacg ccaatcaggg
     3721 cgggctgttc gacatgatgg aagacgccat cgaaccggtg cggctcatcg acctgccgag
     3781 gtggagcgaa tcggaaaaac tcgccgaaga aaaaaccgtc atcggctttt acctgtccgg
     3841 ccacccgttc ggcccgtatg cccaagaagt ccgccaaatc gcaccgacca aattagaccg
     3901 tctgaagccg caagacagcg tgcgcctcgc cggattcgtt accgccgtac gcaccatgat
     3961 gggcaagcgc ggcaaaatcg ccttcgtcag ccttgaagat ttgagcggac aggttgaaat
     4021 catggtcggc ggtcagacgt tggaaaactg cgccgactgc ctcaaagccg accaagtgct
     4081 gattatcgaa tccaaagtca gccgcgacga ctacggcggc ggcgacgggc tgcgtattct
     4141 ggcaaaccaa gtcatgaccc tgcaaacggc acgcgaacgc tacgcccgca gcctcagcct
     4201 cgccctcgcc ccgcatcacg acatcggcgg actggtacgg ctgctctcct cccaccaact
     4261 gcccgacacg ccgcgcatcc cgctgcaact gtcgtatgcc aacgaaaaag tgtcgggcag
     4321 gcttcaagtg ccgccgaaat ggacggttac accgagctcc gcattgttcg gcgaactgga
     4381 aacattgctc ggcagccggt cggtgcgcgt caactggtaa cccaaaatat aaatgccgtc
     4441 tgaagcccaa aaaccggttt cattcgtact ttattcgaat gattgaataa aagtaactgc
     4501 caagaaaaac gtattttttg gttatttcgc cagtctaaat agagcaaccg ggacgattga
     4561 tatccgtgtg catgacacag acagcaccaa agggaaaaac ggcattttcc aaagtatcgg
     4621 tatcaaaacc gccctttcac tccaaaaata ccaaatcgac aaaccgggca aagaaatcag
     4681 accgtgccgc ctgaaaaaac gcccacccgt ccgttaaatt aacctatccc tgtttcagac
     4741 ggcctgaagc agggattttt atatcaaaat aaaatgagaa agggagcaat aacccttagg
     4801 tagctcttgt tattttccga tgcaaaacaa agcagtcata tatttaattc cccctacctc
     4861 tgccaagcct tcctcaaata ttcgacgcaa tcggtcagcg agtagaacga gacattgccg
     4921 tggtcggcat tcggatattc ccggaaaaag acggcggccc cgtgcctgtc caactctgcc
     4981 gccatgcgtt cggacagtcc tgccatatcg cgttcttccc tgcgtttgca accgctgccc
     5041 cgttctagcg cgccgatgtt gaggcagaca tcgatgccgt ccagccggtt ttcagacggc
     5101 ataaaatcga gtatccgcct gttgtgccac caaatcgagg gggatacgag ccaatgccgt
     5161 ctgaaacggc ggtgggaaag cagggaatac agtccgaaca gtgcgccgaa cgagtgtccg
     5221 aatacggcgg tttcattgcg gttgagggtg tagcggcttt ctaaaaaggc ggtcagctcg
     5281 ctgtcgataa aggcggcgaa gcggtctgcc tgtccgaact gctgccgttc gtctgctgtg
     5341 gcgttgtctc caagcggcgg cgtgtagtcg gcggcacgtt gtgccaaatc gcgcacactg
     5401 cctgtcgtgt agccgatacc gacaatcagg cagggggcgt tgcttcgggt aacggggttg
     5461 ttcatcagcg actgcatgat gttgaaaagt gcggggaaaa aggcttcgcc gtcgaggaca
     5521 aagaggacgg gatagccttc agacggtatt tcgccgagtg ttgccgtctg aatccgatag
     5581 attcgccccg tgcaggtgga tttgatttcg gtttcaaagg cttggggcag tatggcaggt
     5641 tggaatgtgt cggtcggtat gggtttcatg atgttcggct tgtgggtcag actggcggca
     5701 agcggtaaaa ccgaaccggc aaagcggtct gcctgccggt tcggtctatt ttccttcgca
     5761 atgccatact ccagttgtga gagcataggg tatgccgcgc agcttgttgt agtttgatga
     5821 tgctgcggct gccgtttcag acggcatatt ggtctttaaa aactgtaacg caggtttgcc
     5881 gtcaggctgc gctccgaacc gggaatgtta aaggtgctct cgctgccgac gcgggcgtag
     5941 taatggcggt tgaagatgtt gtcggcgttg atttgcagct tcagtttggg cgtgaagcgg
     6001 tatgccgcca tcgcatcgaa cgtggcataa ccgcctgcat gtatccctgc agatgaagta
     6061 atgccgctca tcgcgttcac gccgccgccg atggtcagcc cggacgtaac ttggtaagtc
     6121 gtccacaggt ttgcgctgtg tttgggcatc agcaggaaga tgccttcgtc gcgcgaattg
     6181 gaggcggttt tgatttggct gtgcaggtag ctgtaacctg catggatttg ccatttcggt
     6241 gtcatcgcac cgctgatttc ggtctcaaca ccttccatca cgcgtttgcc caatgcggcg
     6301 taacgggttt ttttgttgtt tgagtccagc ggtgcggcgg cgtttttatc cttcatgcgg
     6361 tagaacgaaa cccgggtatt gaggcggtcg tccatgtagc tgcctttgta gccgatttca
     6421 aactggttgc cttcacgcgg tttgagcagc ttgccgtcgg tgccgatgct ggtttgcggt
     6481 gtgtagagtt gggaggcgga agcgtacagg ctgttgctgc cgtctatatc gtaaaccgcg
     6541 ccggcgtagc ttgtaaattt ggttttcgaa gctttatgca gggttttgcc gtcgcccgac
     6601 tcgattttgt gatgtcctac acgtccgcct gcaatcaacg acaaaccttc cagaggacgg
     6661 aacaccgtct tggcatacaa accggtttcg tcgaggtttt cttcggtaac ggagtgattg
     6721 aaacctttgt ttccggcgcg ggcgttctga agtatgccgt tataaggcaa agcgcggaaa
     6781 ccatctaaag cgacgctttt tgacaaagtc gaacgccctt gttcattagt actgcgcaag
     6841 cggttgtagt ctgcaccaat cacaaattcg ttggcggtgt tgcccaaggc aaacggacgg
     6901 ctgtaacttg cgtcaaccgc aaaggctttt tgtttaatgt ccgtacccaa acccgctacg
     6961 tcggcttgtc cggtattgtt gagtttgctg cccgcaaacg tataattgga atcggctttc
     7021 cgatcggaat agcgcatacc gactttgccg tagccgccgt tgccgaagta atgtttcaaa
     7081 tcggcgaaca cgtcgtggct gtgcatttta aatttgttcc aatccgcgcc gacaaatacg
     7141 tgttgcggca gggacggtaa tttgttattg gcatcggcag gcaggccgtt gtacggcgcg
     7201 aggcggcgtt gctggtaaag atagcccgcg cccaaaaccg tatcggggtt gatgtcccaa
     7261 tccgccgccg cgtagaaggt ttcgcgccgg ttgtttttct cggcgggacg cggagacgcg
     7321 ccgacggtct gcgccatcac gcggccgcgc acgctgccgt ctgaattgag gctgcccgat
     7381 acgtccgcct cggctttata ttgtttgtgc gtaccgaacc ctgccgccgc atgaccttgg
     7441 aacgctttgg tcgggcgttt gcgcaccaga ttcacgatgc cgcccatctc gccgctgctg
     7501 tcgaacagtc cgctcggccc gcgcatcact tccacgcggt cgaaggcgaa caggttgggc
     7561 agcgtgccgt tgatactctg catctgcgcg ggcaggccgt cgatgttgta ttcgctgtat
     7621 tcgtaaccgc gcgcgtaaac cgaagagcgt ccgtcgtcgt tgctcaacac gcgcaggccg
     7681 ggcgttttgc gtgccaactg gtcaaacgta tcaacattgc ggtctttgac ctgctggttg
     7741 gtaatgatgc tgacggattg cggaatttcg cgcaaagaag cggggatttt tgtaccgacg
     7801 gtagcggcaa acgagctgta atcgccgttt ttctcggtgg caatcgcgtt gtaagaacgc
     7861 tgacccttaa tatggacggt ttccaaacct tccgtttgtg cggcaaaaac cgaagacgag
     7921 agtgctgcca aaaccgtggc ggcggtcata ttgatgcgga aaactgacat aaactgtccc
     7981 attcacataa atgataatgg ttctatttta ataaagcgca acgcggcttg ttcggaaaaa
     8041 catatcgcgc agccgacaaa ttttgtcgaa aatgcgacac gtctgcgttt tccgcataaa
     8101 atttgctttt ttactgcaac caacctgcta tgaccacgcc caaactcatc atcttcgact
     8161 gggacggcac gcttgccgat acgacccaac ccatcatcga caccatgcgc cgcagcttcg
     8221 ccgaatgcgg ttttccgccg cccgaagcgg aacgcgtccg cagcctgatt ggctacagcc
     8281 tgcccgaaat catccgcacc ctgctcgaaa tgccgtctga aaccgccgtt gccgacatca
     8341 cacgcactta ttccgcacat tacctcaatc ccaacaaccg caatatgtcc ttatttcccg
     8401 atgccctgcc ctgtctggac aagctcaaag cacaaggata ctggcttgcc gtcgccacgg
     8461 gcaaagggcg ggcgggtttg gacaacgcca tcagtcaaac cgccaccggc ggctattggc
     8521 tcgccaccgc ctgcgcgggg gaatatccct ccaaaccctc gcccgaaatg gtattcggaa
     8581 tctgcggcga actgggactc gacccgaaag aggcattggt cgtcggcgat acggcgcacg
     8641 acctgcatat ggcggcaaac gcaggcgcgg cggcagtcgg cgtggccacc ggcgcacatt
     8701 cgcgcgaaca gctccttagc gcaccgcatc tcgccgtatt ggacggtttg tccgaactgc
     8761 ccggttttct tgcacaacat tacgcctgat tggtttccgc atccggcaca cggcaaaaat
     8821 gccgtctgaa gcctgttcag acggcatttg tgttgcccaa acattcaacg cctgcgtcaa
     8881 cgtttgcaca aatcgggttt ggtttcgccc tcgcggcgca actctttggg caggacgaac
     8941 acaatgcttt cttccgcacc ctcgccttcg cgtacggttt cgtgccccca tccgcgtatg
     9001 gttgccagta cttcccgcac caacacttcg ggcgcggacg cgcctgccgt tacgccgact
     9061 ttgtttttgc cctcaaacca tgcgcgttgc aggtagcctg cattatccac catatacgca
     9121 tcgattccgc gcgatgccgc cacttcgcgc aagcggttgc tgttggacga attgggcgaa
     9181 ccgaccacaa tcacgatgtc gcactgttct gccaactctt tgacggcggt ttgccggttg
     9241 gtcgtcgcat agcagatatc ttccttgtgc ggattgcgga tattggggaa acgcgcgttc
     9301 agcgcggcga tgatgtcttt ggtttcatcg accgagagcg tggtttggct gacataggcg
     9361 agtttgtcgg ggtttctgac ttcgagtttt gccacatctc cgaccgtttc gaccaaaagc
     9421 attttgcccg gcgcaagctg ccccatcgtt ccttcgacct cgacgtgccc cttatgcccg
     9481 atcatgatga tttcacagtc ttgggcatcc agtcgggcga cttccttatg cactttcgtc
     9541 accagcgggc aagtcgcatc aaacacgcgg aaaccgcgct ccgccgcttc ttgccgcacc
     9601 gccttcgata cgccgtgtgc cgaataaacc agtgtcgcgc ccggcggcac ttccgccaag
     9661 tcttcaataa acaccgcacc tttttcacgc aggttgtcca cgacgaattt gttgtgaacg
     9721 acttcgtggc gcacataaat cggcgcgccg aactcttcca aagcacgttc gacaatactg
     9781 attgcccgat ccacaccagc gcagaagccg cgcggattgg caaggatgat ggttttctcg
     9841 ttcataagcc cggtatttcg ttttcagacg gcatcaatat ttttcttctt gggttttacg
     9901 gtggacgatg ttgtccaaca ctgccaacac cgcgccgacg cagataaagc tgtcggcaat
     9961 attaaaggcg ggataaaacc aattttgcca ataaaacaat aagaaatcga cgacatgacc
    10021 gtgtatcagg cggtcgatga cattgcctaa cgcaccgccg ataatcatcg ccgcacccgt
    10081 tttgccgagg gttgcaaact catcgcgcaa gatggcgcgt accaaatacg cgctcaccgc
    10141 caccgccagc accaaaaaaa agtatttttg ccagccgccc tgatcggcaa ggaagctgaa
    10201 cgccgcaccc gggttgtaca ccaaggtcaa atcgaaaaag gaaggaatga cattgacgcg
    10261 ttcccgatac tgaaacgacg acagcaccgc ccacttcgac cactggtcca gcacgatggc
    10321 ggcaagtgcc aatacccaat agcgcgtttt acttgaaaca gatgaagaca tatttttcaa
    10381 cagccggtaa aagagtacca ttttacccga aaaccccctt tcctgtaccc gaaacggcaa
    10441 atgccgtaat cttaaaaccc gtcattcccg acaacaccgt aatctcgaaa cccgtcattc
    10501 ccgcgtaggc gggaatccag acctgtccgc acagaaactt atcggataaa aacagttgcc
    10561 caaaccccgc gttctatagt ggattaaatt caaaccagta cggcattgcc tcgccttgcc
    10621 gtactatttg tactgtctgc ggcttcgttg ccttgtcctg atttaaattt aatccactat
    10681 agattcccac ttccgtggga atgacggttc agttgcattc cgacaacacc gtaatcttga
    10741 aatccgtcat tcccgcgcag gcgggaatct atcggaaatg actgaaacct cgagattcta
    10801 gattcccact ttcgtgggaa tgacggttca gttgcgttcc gacaacaccg taatcttgaa
    10861 a
//
LOCUS       DAXHRP010000054        10852 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.054, whole genome shotgun sequence.
ACCESSION   DAXHRP010000054 DAXHRP010000000
VERSION     DAXHRP010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10852
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.054"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..86)
                     /locus_tag="ACFM72_001039"
     CDS             complement(<1..86)
                     /locus_tag="ACFM72_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HFC6257618.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPV"
     gene            complement(472..747)
                     /locus_tag="ACFM72_001040"
     CDS             complement(472..747)
                     /locus_tag="ACFM72_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC6257619.1"
                     /translation="MNATNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRKLWEQAEKMPSET"
     gene            complement(744..2027)
                     /locus_tag="ACFM72_001041"
     CDS             complement(744..2027)
                     /locus_tag="ACFM72_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC6257620.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDGELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGSVQAVTVLGFVWLAGFGHFDTVGTSERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWMG
                     YVPFFRLCFILALPGMLLLLKVAPWNEEKITVINK"
     gene            complement(2175..3593)
                     /gene="glnA"
                     /locus_tag="ACFM72_001042"
     CDS             complement(2175..3593)
                     /gene="glnA"
                     /locus_tag="ACFM72_001042"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HFC6257621.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGETAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPTVKGGYAPVAPIDCGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            3677..3862
                     /locus_tag="ACFM72_001043"
     CDS             3677..3862
                     /locus_tag="ACFM72_001043"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257622.1"
                     /translation="MPSETGFASNFKPENIVSDGKIVNNADKPAHRIRIFPDRYRKRC
                     RLKAVSDGIVSICTPPL"
     gene            3893..4702
                     /gene="aroE"
                     /locus_tag="ACFM72_001044"
     CDS             3893..4702
                     /gene="aroE"
                     /locus_tag="ACFM72_001044"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HFC6257623.1"
                     /translation="MTALPRYAVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAL"
     gene            4705..5406
                     /gene="mtgA"
                     /locus_tag="ACFM72_001045"
     CDS             4705..5406
                     /gene="mtgA"
                     /locus_tag="ACFM72_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HFC6257624.1"
                     /translation="MFRIIKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWMPYKRISTNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LKRMGSAELPESDTD"
     gene            complement(5731..5806)
                     /locus_tag="ACFM72_001046"
     tRNA            complement(5731..5806)
                     /locus_tag="ACFM72_001046"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5771..5773),aa:Phe,seq:gaa)
     gene            complement(5997..6731)
                     /gene="lptB"
                     /locus_tag="ACFM72_001047"
     CDS             complement(5997..6731)
                     /gene="lptB"
                     /locus_tag="ACFM72_001047"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HFC6257625.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(6805..7335)
                     /gene="lptA"
                     /locus_tag="ACFM72_001048"
     CDS             complement(6805..7335)
                     /gene="lptA"
                     /locus_tag="ACFM72_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HFC6257626.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7316..7897)
                     /gene="lptC"
                     /locus_tag="ACFM72_001049"
     CDS             complement(7316..7897)
                     /gene="lptC"
                     /locus_tag="ACFM72_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HFC6257627.1"
                     /translation="MKIRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(7894..8430)
                     /locus_tag="ACFM72_001050"
     CDS             complement(7894..8430)
                     /locus_tag="ACFM72_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HFC6257628.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(8495..9469)
                     /locus_tag="ACFM72_001051"
     CDS             complement(8495..9469)
                     /locus_tag="ACFM72_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HFC6257629.1"
                     /translation="MAENGKYLDWAREVLHAEAEGLREIAAELDKNFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            9566..10621
                     /gene="tal"
                     /locus_tag="ACFM72_001052"
     CDS             9566..10621
                     /gene="tal"
                     /locus_tag="ACFM72_001052"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HFC6257630.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWAQYFGSPEFAALETKGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLATRLQED
                     GLKQFEEAFEKLLAPLA"
BASE COUNT         2589 a         2977 c         2784 g         2502 t
ORIGIN      
        1 ttaacaggtt cacatgaggt catagtaaaa acactcccaa taaacaaaat aaaaagttga
       61 taaatggtag tagcatatgg tctcataatt tcaagcttag aaattagtta aagaatatat
      121 tatggtagat actaactctt taagttgaca tattgtgcga tatcgagggc tgtaccgtat
      181 tttcccatcg tattttcccg ttctttatat gagcggcagg catcctcata aaagaaggga
      241 taccgataag gaaaaatacc ccaacataaa aaatatactg attaatcaat acaaatccaa
      301 caaacagttc atcgtattct tttctgttgg cgtataaaaa atactgatat atgccttcac
      361 tttcataggg cgacgcttta tataccgtcc tgtgtgttga aacgtcggtt ttccttaccg
      421 cctgccccgc ttttccctga ttgctgccaa ctgccgtccg aacctgaacc gtcaggtttc
      481 agacggcatt ttttccgcct gttcccacaa tttccgtttt tgtgcggcgg tcagtttttt
      541 gacggcgatt tcctgtttga gcgcagtgcc tttatccatc ccgcctgcaa cgatacgcat
      601 cgccaccggt ttgaatacgc gggtatattt cgcgccttta ccggttgtgt gggcggcaag
      661 ccgctgttgc ggattcgggc tgatgccgca atagaacgcg ctgttttcgc acaatatcag
      721 gtaaacgctc cagtttgttg cattcattta ttgataaccg tgattttttc ttcattccac
      781 ggtgcgactt tcagcagcag cagcataccc ggcagggcaa gtatgaaaca cagccggaaa
      841 aacggcacat agcccatcca ttcgatcaga tagccggcaa aggaattgat gaccgtacgg
      901 ggaacagcgg ataggctggt aaacagtgcg agctgcgttg cggtaaatgc gggattggtc
      961 tcgcgcgcca tatacgatac gaacgccgcc gtccccaaac ccacgccgac tgcctctgcg
     1021 ccgataactg ccgccagcat cagcctctcg cttgtaccga ctgtatcgaa atgtccgaac
     1081 cctgccagcc atacaaaccc caaaacggtt acagcctgca ccgagccgaa tagccataag
     1141 gctttgttta cgccgatttt cagcatccac acgccgccca agatacctgc cgccactgcc
     1201 ggccacagtc ctgcattttt cgcaatcaaa ccgatgtctg tcttgctgaa acccatatcc
     1261 aaataaaacg gcgttgccaa cgcggttgcc atactgtcgc cgagtttgta aaggaagata
     1321 aacagcagca cgcatacagc cgaagcgatg cccttgcgcg taaaaaattc tttaaacggc
     1381 tctaccacgg tctgcttcaa cgttttagga acggcaggcg gcaacacggg ttcgcgcgcg
     1441 agaaacagcg tcatcagaag gccgggcagc ataaataatg aagtgataac aaatacttcc
     1501 gaccacggca tcctgtctgc caacaccaaa ctcaatgaac cgggaatcag ggcggcaacc
     1561 cggtaggcgt tgacgtgaac ggaattgccc aaacccaatt ctccgtccga caaaatctcg
     1621 cgcctgaacg catccaatac aatgtcctga ctggcggaaa aaaaagcgac aagcaccgac
     1681 aagccggcaa tcagcggcag atgattccga gggtttaaaa aggcatatgc cgccaaagcc
     1741 gccagcaacc ctgcctgcgt cagcagcatc cacccgcgcc gccgccccaa aacgggcagc
     1801 ctgaccgcgt ccatcagcgg cgaccacaaa aatttccaag taaacggcag accgattaac
     1861 gccatcagcc cgatgctttt taaatccacc tgctcgctgc gtaaccacgc cggaatcagg
     1921 ttaatcagaa agtacagcgg cagccccgag gtaaaccccg taaaaataca gacaagcata
     1981 ttgcgggaaa agatttgccc gataaaacct gatttcgatg cagtcatcgt tcgtgcagcc
     2041 aaaaaacaaa agcctattgt agcaaatatc gcccgcctgc tgaaaaacgc cgcgccgccg
     2101 ttttgccgtt ccaatgcaaa atgccgtctg aaactgtgtt cagacggcat tgcttttctg
     2161 aaaacccgac gtgcttacag gctgtaatac atttcaaatt ccagcggatg cggcgccatg
     2221 cggatgcggc ggacatcttc ctctttaaag gcgatgtagc tgtcgatcca gtctttgctg
     2281 aacacgccgc cgcgcagcag gaattcgtgg tcggctttga gggcggcgag tgcttcttcc
     2341 aaagaagcgc agacggtcgg gacgagcgcg tcttcttccg gcggcaggtc gtagaggttt
     2401 ttatcggcag gatcgcccgg atggattttg ttttgaatac cgtccaaacc ggccatcaac
     2461 aaagcggcaa atgccaagta tgggttggcg gtcggatcgg ggaaacgcgc ttcgatgcgg
     2521 cgcgccttgc tgctgttcac ggacggaatg cggatggaag cggaacggtt tttggcggaa
     2581 taagccagtt tggtcggtgc ttcaaagtgc ggcacgaggc gtttgtagga gttggtggac
     2641 ggattggtaa tcgcgttcag ggctttggca tgtttgatga tgccgccgat gtaataaagg
     2701 gcggtgtcgc tcaagccggc atagccgtcg cctgcgaaca ggttttgacc gtctttccag
     2761 atggattggt gaacgtgcat accgctgccg ttgtcgccca tgattggttt gggcataaag
     2821 gtggcggttt tgccgaagtt gtgggcaacg ttttggatga cgtatttcat gtcttgggtt
     2881 tggtcggcgc gtttaaccaa agtggcgaag cgcgtgccga tttccatttg gctgccggtg
     2941 ccgacttcgc tgtggtgcac ttccacttca ataccgagtt cttccaaaat gtttaccatc
     3001 gccgaacgca aatcctgacc gcagtcaatc ggtgcaacag gtgcgtaacc gcctttgacg
     3061 gtcgggcggt ggccggtgtt ttgaccgtcc atatgcagac cgcttgccca cgcgccgctt
     3121 tcggacgtga tttcgtaacg ggttttgtgc atatcggttt caaattctat gccgtcgaat
     3181 acgaaaaact cgggttcggg accgaaatag gcggtctcgc cgatgccgga agatttcaaa
     3241 taggcttcgg ctcggcgggc gatggagcgc gggtcgcggt cgtaaccctg accgtcggcg
     3301 ggatcgataa cgtcgcaagt caacacaaca gtcgcatcat cataaaaagg atcgacgaag
     3361 gctgtagacg catcggggcg caactgcata tcggaagcct gaatgccttt ccagccgccg
     3421 atagacgaac cgtcaaacgc ctgaccgttt tcgaaccact cttcggggtc ttccaacacg
     3481 atgcgcgcag gcacggtaaa gtggtgctgc ttgcctttgg tatcggtaaa gcgcaaatcg
     3541 acaaagcggg cttcgctttc ttcaatcaat tttacggcgt ttttaataga catttttcag
     3601 ctcctggaaa agggaaatag caaaatatgc ggaacgcggc ggcttgacgc aaagtcggca
     3661 cgattttacc acgccgatgc cgtctgaaac cggttttgcg tcaaatttca agccggaaaa
     3721 tatagtttca gacggcaaga ttgtcaacaa tgcggacaag ccggcgcacc gcatccggat
     3781 ttttcccgac cgatacagga aacgatgccg tctgaaggcg gtttcagacg gcatcgtttc
     3841 catctgtacg ccgccgttat aaaatagcct tcccgtcttt tggaacacga ccatgaccgc
     3901 cctcccccgc tacgccgttt tcggcaaccc cgtcgcccac agcaaatcgc cgcaaattca
     3961 tcaacaattt gcccttcagg aaggcgttga cattgaatac gaacgcattt gcgccgacat
     4021 cggcggtttc gcgcaggcgg tttcgacatt ttttgaaaca ggcggttgcg gggcaaacgt
     4081 taccgtaccg ttcaaacagg aagcgtttca tctggcggac gagcattccg aacgcgcatt
     4141 ggcggcaggt gcggtcaata cgctgattcc gttgaaaaac ggcaagctgc gtggcgacaa
     4201 caccgacggt atcggtttga ccaacgacat cacgcaggtc aaaaatattg ccatcgaggg
     4261 caaaaccatt ttgcttttgg gcgcaggcgg cgcggtgcgc ggcgtgattc ctgttttgaa
     4321 agaacaccgt cctgcccgta tcgtcattgc caaccgtacc cgcgccaaag ccgaggaatt
     4381 ggcgcagctt ttcggcattg aagccgtccc gatggcggat gtgaacggcg gttttgatat
     4441 catcatcaac ggcacgtcgg gcggtctaaa cggtcagatt cccgatattc cgcccgatat
     4501 ttttcaaaac tgcgcgcttg cctacgatat ggtgtacggc tgcgcggcaa aaccgttttt
     4561 agattttgca cgacaatcgg gtgcgaaaaa aactgccgac ggactgggta tgctagtcgg
     4621 tcaagcggcg gcttcctacg ccctctggcg cggatttacg cccgatatcc gccccgttat
     4681 cgaatacatg aaagccctat aaacatgttc cgcatcatca aatggctgat tgccctgccc
     4741 gtcggcatct ttatcttttt caatgcctat gtgtacggca acatcattac ctaccgcgcc
     4801 gtcgcgcccc atcggactgc ctttatgtcg atgcggatga agcagtttga acaggaaggt
     4861 cgcgatgtcg cactggatta ccgctggatg ccctacaaac gcatttccac caacctgaaa
     4921 aaagccctga ttgcttccga agatgcccgt ttcgccgggc acggcggctt cgattggggc
     4981 ggcattcaaa acgccatcag gcgcaaccgg aacagcggca aagtgaaggc gggcggctcg
     5041 accatcagcc agcagcttgc caaaaacctg tttttaaacg aaagccgcag ctatatccgc
     5101 aaaggcgaag aagcggcgat taccgcgatg atggaagccg ttaccgacaa agacaggatt
     5161 tttgaactgt atttaaactc aatcgaatgg cactacggcg ttttcggcgc ggaagccgcg
     5221 tcccggtatt tttatcaaat acccgccgcc aagctgacca aacagcaggc ggcaaaactg
     5281 acggcgcgcg tccccgcccc gctctactac gccgaccatc cgaaaagcaa acggctccgc
     5341 aacaaaacca atatcgtgct caaacgcatg ggttcggcag agttgcctga aagcgacacg
     5401 gactgattgt ttcagatatg gaaatgccgt ctgaactgcg gttcggacgg catatgtttt
     5461 ctggttttta tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca
     5521 aatagcacgg aatcgattca cttggtgctt cagcacctta gagaatcgtt ctctttgagc
     5581 taaggcgagc caacgctgta ccggtttaaa tttaatccac tatacctgcc cgacagccgc
     5641 aaagaccgta tcatacatag caggcattgc ggtgcgggat tactgccgca aacggcaggc
     5701 aaaaaaaata accgcttcaa ggcggttttt tggtggccag aggcggaatc gaaccgccga
     5761 cacacggatt ttcaatccgt tgctctacca actgagctat ctggcctttg tctgtctcgt
     5821 taagagatgc gtattaaacc aaattacggg acgacatgca agcatatcgg gcaatattct
     5881 ttgaaaacag gtttaagtca atgttttaaa tttaaattaa tttatgtaaa aacaacataa
     5941 atccgtattt ttgccgcctg cccgacgata ttaggtcgcc cgtctgaaaa atattttcaa
     6001 tatttgaagt tcttacccag ataaacagaa cgaacctgtt cgtttccgac caaatcatca
     6061 ggttttcccg atgccaacac cgtgccgtct gaaataatgt aggcccgatc gcagatgctg
     6121 agggtttcgc gtacgttgtg gtcggtaatt aatacgccga taccgcgcga cttgagaaat
     6181 ccgatgattt tttggatgtc gatgacggcg atgggatcga cgccggcaaa aggctcgtcc
     6241 aacaaaataa aatgcggttt catggcaagt acgcgggcga tttcgacgcg tcggcgttcg
     6301 ccgcccgaca aagatggggc aggattattg cgcaaacgct cgatattcag gtcggcaagc
     6361 agtttttcaa cttcgccgtc gatgcggctt ttgtctttgg tactgatttc taaaatggcg
     6421 cggatgtttt gttcgacggt cattttacgg aaaatagagg cttcctgcgg taggtagccg
     6481 acacccaggc gggcgcgttc gtgtatgggc aggtgacgca attcctgccc gtccagcatc
     6541 acgctgcccg catcggcggc aatgagtcca acaatcatgt agaagctggt ggttttaccc
     6601 gcaccgttgg gcccgagcag gccgacgact tccccgcttt cgatttcaag ggagaagctt
     6661 ttaacgactt ggcgtttttt gaaacttttt tgcaggtttt gaacaacaag gcggctgacg
     6721 tttgcgctca taaatatctc ttcaatatct tcggtcggca aatgccgtcc gaaccaggtt
     6781 tatgtttcag acggcatttt gggattattc ggatttttgc gtactcgaag gctggataac
     6841 gacgctgacc ctgccggatt tggaagcgga ttttgcgccg gattttgtgc tgccgctgat
     6901 ggtatagact tcggttttgg tgttgtatgt aatcaccgca ccttcggcga catcgccgcc
     6961 gcgctgtact ttggcattac cggttaagac tacggtgctg cctgcagatg aataagcaac
     7021 gttgtttgcc tgtccgcgca ccgtgccttt gccgccgtcc aatgtctggc tgaagcggac
     7081 tggcgaacct tccgccctca cggattcgcc gcctttgccg ccgcgtgtaa cattgacgcg
     7141 ggcggcggaa atattgagcg taccctgtct gatgacgacg tttccgctga atgtggtgct
     7201 ttggttggct tgatcgagcg aaccttggtc ggcctcaatc tgaataggct gcctgctgtc
     7261 gctttgaagg gcaaaagcgg gggacgccga aaaaaatgct attaaaacaa atagcttaca
     7321 tatcttttgt atcataaatc gtggctttca ctttagatga gaagttcaac atgcctgttt
     7381 tgtggtcgta agtcatgccg cccgcctgac cgtgcgatgc accatattgg aaactgacag
     7441 gcgtatcggt ttgggcatat tgagattcgg tatcgacatg cagcttttcg gcttcaactt
     7501 tacccgcctg ccgtttgccg tcggcggttt tggtcagcac aacgttgttt ttaaaaagaa
     7561 cctgtttgtt ttcggtatgg taaacggctt catcgctgcc gacttcgtac aacaacctgc
     7621 cttcttggaa gaacacgaga tgcggcgaat caaaatggat gtcgctgctt tcgggaaact
     7681 gtttcgcgcc tttcgcgctc aaatgttctt ttaagtatcc ctgttcgtca aaccgcctgc
     7741 catccaatcc gtccattgtg tattgcggtt cgtcgggatt gagcctgact tcttcaatct
     7801 cgacttcgct gatgcgtccc aaccatgccg acaggctgcc caaggcaacc gccaatatca
     7861 atgggaacgc aattccgtac cgccatctta ttttcatttg atgtactcgt tcaaagccgc
     7921 gcccaaagtc ccttgcgcct gcataatcag gtcgcacact tcgcgcaccg cgcccgcacc
     7981 gccggggcgt ttggcaatat aggcggcgtg ttgcagcgta aaccaatgcg cgtcggggac
     8041 ggcaaccggc aatccgcaac gcaccatcac cggcaaatcg accacgtcgt cgccgacaaa
     8101 ggcacactcg gcttcttcca cgccgacctg agcgcgcagc tcttcatacg cggcgcgttt
     8161 gtccgaaatg cctttgaagt agtaatttat gcccaactgt ttgacgcgga tgccgacgga
     8221 gggcgcgtcc cgacctgtga taatcgcagt ctgcacgccg cttgcctgaa gcattttcag
     8281 accgtgtccg tccagtgtgt gaaacgattt gatttcttcg ccgttatcgc ggataaagat
     8341 gcgcccgtcg gtcaaaacac cgtccacatc caggatcagc agtttgattt tggcggcgcg
     8401 cgcctgtaat tcgggagaaa ttgcctgcat gggatttcct tgttttcaga cggcatatct
     8461 taccacaaat gccgtctgaa acggctgcaa cgccttatac aatccgcgcc gccaaaaggt
     8521 cgtgcatatt cagcgcaccg atcagcacgc cgtctgcatc ggtaaccaga agcccgttca
     8581 catggtttgc ctgcatgact ttcagggctt cggtggcgag gcgttcggcg gcgatggttt
     8641 tagggtgtgt atgcatgact tcgtctatcg aaagaccggt aaaattgtcg cattcttgaa
     8701 acaggcggcg caaatcgccg tcggtgaata cgcctttcag acggccttgc ccgtccgtta
     8761 ccgccagcat ccccagccct ttttcactca tgctgacgat ggcttctttc aagggcgtgc
     8821 cgagtcggac ggcaggcagg ccgccgcctt tgtgcataat gtcggcaacg cgcaaaagta
     8881 ggcgtttgcc gaggctgccg gcagggtggc tcaaggcgaa gtcgtcgggc gtgaacgcgc
     8941 gcgcgcgcaa cagaacgacc gccaacgcat cgcccaaagc catgacggcg gtggtgctgg
     9001 tggtcggggc aagccccagc gggcaggctt ctttggaaac cgacgccgtg atgtggatgt
     9061 cggcatggcg cgccatggtt gaatcggggc gggcggtgat gcagacaagc gtgatgtctt
     9121 tgcgtttgag cgcggggatg atggcggcga tttcgtcgct ttcgccggaa ttggaaatcg
     9181 cgacgaccac gtcgttgtcc acaatcatac ccaaatcgcc gtgtgccgct tccgcagggt
     9241 ggacgaaaaa cgcaggcgtg ccggtcgagg ccatagttgc cgccattttg cgcccgatat
     9301 gtcccgactt gcccatgccc gtgataacga ccctgccctt gcagtgcaac aacgcgtctg
     9361 ccgcaaggac gaagtttttg tccaattccg ctgcaatttc gcgcaagcct tccgcttcgg
     9421 cgtgcaacac ttcgcgtgcc cagtcgagat attttccgtt ttctgccatt gccatccgcc
     9481 tttgctgtaa taaaactacc caaaatttcc gaatcggggt agcataagcc ctcaaacccc
     9541 gcctatccat ccaaaggaat cagagatgac cattttatcg gacgttaaag cattaggaca
     9601 acaaatctgg ctggacaacc tttcccgctc gctagtgcaa agcggcgaat tggcgcaaat
     9661 gttgaaacag ggcgtgtgcg gcgtaacttc caatcccgcc atcttccaaa aagccttcgc
     9721 cggcgacgcg ctttacgccg atgaaatcgc cgccctcaag cagcaaaacc tcagccccaa
     9781 acaacgctac gaaacaatgg cggttgccga tgtgcgtgcc gcctgcgacg tttgccttgc
     9841 cgaacacgaa tccaccggcg gcaaaaccgg cttcgtcagc ctcgaagttt cgcccgaatt
     9901 gtccaaagac gcgcaaggca cggttgaaga agcgcgccgc ctctacgccg ccatcgggtg
     9961 caaaaacgcg atgattaaag tgcctgccac cgacgcaggc atcgatgcgc tcgaaaccct
    10021 cgtttcagac ggcatcagcg tgaacctgac cctgctgttc tcacgcgccc aaaccctcaa
    10081 agcctacgcc gcctacgcgc gcggcatcgc caaacgctta gcagccggac aaagcgttgc
    10141 ccatatccaa gttgtcgcca gcttcttcat ctcccgtgtg gacggcgcgc tggacacaac
    10201 actgcccgac cacctcaaag gcaaaatcgc catcgccctt gccaaagccg cctaccaaga
    10261 ctgggcgcaa tacttcggca gccccgaatt tgccgcgctg gaaaccaaag gcgcaaaccg
    10321 cgtgcagctt ttatgggcat ctaccggcgt gaaaaacccg gcctatcccg acacgctcta
    10381 cgttgacagc ctgatcggcg cgcacaccgt caacaccgtt cccgatgcca cgctcaaagc
    10441 ctttatcgac cacggcacag ccaaagccac gctgaccgaa ggcgtagaag aagcacaagc
    10501 gcagctcgcc gaaaccgccg cgctcggcat cgatgtcgaa accttggcaa cgcgtttgca
    10561 ggaagacggt ttgaaacagt ttgaagaagc gtttgaaaaa ctgctcgcgc ctttggctta
    10621 ggcattttcc cgatgccgtc tgaaaggctt tcagacggca tcgcccgttt gaccggacac
    10681 agtgcggcat atcaaggatt caccctaaaa atattaatgg gcaagaagtt aatgcacgac
    10741 attacccact aacacaaaag gaaatagaat catggcaaaa gcaatcgaaa tcatttcacc
    10801 caatgaaatt tattcagatc tgatttttaa ggatccggta cctccccata ct
//
LOCUS       DAXHRP010000055        10794 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.055, whole genome shotgun sequence.
ACCESSION   DAXHRP010000055 DAXHRP010000000
VERSION     DAXHRP010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.055"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..148
                     /locus_tag="ACFM72_001053"
                     /pseudo
     CDS             1..148
                     /locus_tag="ACFM72_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(158..1267)
                     /gene="mltB"
                     /locus_tag="ACFM72_001054"
     CDS             complement(158..1267)
                     /gene="mltB"
                     /locus_tag="ACFM72_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HFC6257631.1"
                     /translation="MKNRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDAAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASIANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1264..1446)
                     /locus_tag="ACFM72_001055"
     CDS             complement(1264..1446)
                     /locus_tag="ACFM72_001055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257632.1"
                     /translation="MPSEGGSAFRRHFRRRHTDFGRCKRQRAAFRKAADCGGCRISRR
                     ALVPLSHLPYLFGTYL"
     gene            complement(1469..2896)
                     /locus_tag="ACFM72_001056"
     CDS             complement(1469..2896)
                     /locus_tag="ACFM72_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC6257633.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGINLMQYLPEDK
                     WLALKQAGLLLPFLDKKYGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYTLENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            3081..6971
                     /gene="mfd"
                     /locus_tag="ACFM72_001057"
     CDS             3081..6971
                     /gene="mfd"
                     /locus_tag="ACFM72_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HFC6257634.1"
                     /translation="MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKQLKVVLTLDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLP
                     DVSGKEHTLPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSAAATNPLPSPLPQEREQSAAAVSDDLKAKSSLHLVASNLHGQIRQQPTPSPVGEGW
                     GEGKAVAAQTEFPASATNPLPSPLPQEREQSAAAVSDNLKTESSLPPGKSNLHGQIQQ
                     QPAPSPVGEGWGESKAVADQSAIAVITESELYQYVARSRAHNRRKKHAAVSDGLLRDL
                     AEINIGDPVVHEEHGIGRYMGLVTMDLGDETNEMMLLEYAGEAQLYVPVSQLHLISRY
                     SGQAHENVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDY
                     QAFADGFGYEETEDQAAAIAAVIKDLTQTKPMDRLVCGDVGFGKTEVALRAAFVAVMG
                     GKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDI
                     VIGTHKLVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLS
                     MALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTI
                     ENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNA
                     NTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELG
                     AGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGRQPDLDAPL
                     GITTEIKLHSPALLPEDYCPDIHERLVLYKRLAVCETVQQINTIHEELVDRFGLPEQP
                     VKTLIESHHLRLMAKELGIDAIDAAGEAVTVTFGKNNNVDPTEIILLIQNDKKYRLAG
                     ADKLRFTAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            7120..7503
                     /gene="panD"
                     /locus_tag="ACFM72_001058"
     CDS             7120..7503
                     /gene="panD"
                     /locus_tag="ACFM72_001058"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HFC6257635.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7525..8367
                     /gene="kdsA"
                     /locus_tag="ACFM72_001059"
     CDS             7525..8367
                     /gene="kdsA"
                     /locus_tag="ACFM72_001059"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HFC6257636.1"
                     /translation="MDIKINDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            8382..8822
                     /locus_tag="ACFM72_001060"
     CDS             8382..8822
                     /locus_tag="ACFM72_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HFC6257637.1"
                     /translation="MMQTFRKISRYVATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSIVFMATALLSAVLSWRLSGKDAV"
     gene            8870..10156
                     /gene="eno"
                     /locus_tag="ACFM72_001061"
     CDS             8870..10156
                     /gene="eno"
                     /locus_tag="ACFM72_001061"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HFC6257638.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGRVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGK"
     gene            10170..10448
                     /gene="ftsB"
                     /locus_tag="ACFM72_001062"
     CDS             10170..10448
                     /gene="ftsB"
                     /locus_tag="ACFM72_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HFC6257639.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10489..10779)
                     /gene="yfaE"
                     /locus_tag="ACFM72_001063"
     CDS             complement(10489..10779)
                     /gene="yfaE"
                     /locus_tag="ACFM72_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HFC6257640.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         2594 a         3153 c         2764 g         2283 t
ORIGIN      
        1 tgcaaaaatg ccgtccgaac cgaaacgtgg ttcagacggc attttatagt ggattaacaa
       61 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcaaggcaac
      121 gccgtactgg tttaaattta atccactata aaaaacatta caatcccggg ccgccaagcg
      181 aattggcaat gtccctgacc gccgttacat acatccgact gtgattgtac tgccataccg
      241 tataaaaatt gttcaagccc aaataatatt caaacacgcc gggtgcggtt tccagtttga
      301 acaaaaccgc cttttcatca tcggcaagct cttcgccggg gatgatgccg tacgccttca
      361 aatccgccac cgtccgcgtc agggcggttt tttcgccaat gattgcctga acatccgcac
      421 ccggcgccaa tgttgcagac accagtattt tcccgcccgt gcgccaaccg tgctgcttca
      481 tataattggc aatcgatgcc gcgacatcgc caacattgcc ccatatgtcc cgatgtccgt
      541 ccccgtcata atccaccgcc catttccggt agctcgaagg cataaattgc ggcatcccca
      601 ttgcgcccgc atagctgcct ttaaaggcga aaacatcgcc gccttcttct tttgccagct
      661 ttaaaagctc gaccaattct ttttggaaaa acccggcgcg gcgggggtaa tcaaagccta
      721 aggtcgccaa tgcgtccgcc acacggaaac tgcccgtatt tttgccgtaa ttcgtttcaa
      781 tcccgataac cgccacgata agttcggcag gcacgccgta tttttgcgcc acatcatcga
      841 taagcgcgcg gttttccgca taaaaccggc gcgcgccgcg aaatttcgcc ttgcccgaat
      901 ttcccgtgcg gaacacatac cacggacgcg atgtggaggg gcggtgcata atcttgacga
      961 tgtccgcctt gtaagccgct ttgtcaaaaa aatcctgcca ttccgcccgg gaaaaatccc
     1021 ctttcccgac ttcatcgtcc acaaaacggc ggacatttgc attggcggca aacccgctgt
     1081 cggataccgg tacggctgcc gcgtcaaata cggctgccgc gtcaaacgcg gggcggcttt
     1141 cttttttcat ttcatccgcg cggggggctt gggcttcatt tgcccggggc gggcgtgcct
     1201 ccatcgccgt acaggcagac aaagccgcca aacaaattgc cagcggcagt atttttctgt
     1261 ttttcataaa tatgttccga acaaataggg taagtgggaa agcggcacaa gggcgcggcg
     1321 cgaaatgcgg catccgccgc aatcggcggc tttgcggaat gccgcacgtt gcctcttgca
     1381 ccgcccgaaa tccgtatgcc gccgccgaaa atgccgtctg aaggcacttc ccccttcaga
     1441 cggcattacc tgccgccgta tttgcccgct atccgcaata tcggcagtcc aatatgtctt
     1501 tgcggatgtc gttcagcagg aaggctgcgg tgtcttcgtg ttccgcctgt acgaagacaa
     1561 agagtcgggc gatgattttg ccgataaaga ctttttgcag ggcgcaggca tcggtcaggg
     1621 tgtgttcctg caggaagctg cggatgtctt cgggcaaagt gtagtcgcgg gcgacggcgg
     1681 caaagcgggc atcggtttgc aggcggtcga gcagggtttg gtttttgtcc aacttcatgc
     1741 ctgcttcttt ttcttcggcg gtggcgcgga caaactggtc gtaaatttcg gcataaagca
     1801 tatcgttcgg gccttcaaaa atcgtgaagg ggcggatgtc gatagcgata ttgccggcgg
     1861 tgtgtccgcg ttcaaaaccc ttcgcgccca agagtttttg caacatttgc gcggcggcgt
     1921 aagtgtattc cgtggcgagg gttttgacga tgttcgcctc catcagttga tgggcgacgg
     1981 gtgcaacggg cgaaacggaa tggcagacgt agcggtaaag aatctcggaa acctgatggc
     2041 ggcgccggat ttcgcggcgt tcgtaatcga cgaatctgat gtcgttgcgg acgtatcgtt
     2101 ccaggttttc aagggtgtat tccataatgc cgtgcgtcat gccgatcagt tgcaggcggc
     2161 tgcggataaa gatgttttgg aacgcgcgca aaccggcagc gtcgctctgg gagagtttca
     2221 tcacggcggt tgcaggcatt tcggcatcga tgcggttgac ggcgtaacgg acggcgcgca
     2281 agccttcgga tgcgagggtt tcgcagcgga tgtatgtttt ggggacgagc agcaggtcga
     2341 tgactttggc gagtttgccg tttttgcgct ctttggcggc aacgaggagg aagtcgcttt
     2401 gcgagttgcc ctgccagtat ttcgcggcgt tgacgtaaat ggtttgtccg tcggtatatt
     2461 cgtagtaaga ctgcatttct cgggcaatcg ccgcgccgga ggtttcgggt tcggtaacgc
     2521 ctaaaccgcc gccctcgcct ttgaaaacca tgtccaaacc ctgtgcgatt tgcgcttcat
     2581 cgccgaactc ttgcagtggc tgcaacacca gcgcgccttc gatgccggta cgcagcgtaa
     2641 cgggcacgcc gtaatgcccc gcaatccgca agacttcctg aatttcaaac tggctgccct
     2701 tgcgcccgcc gtattttttg tcgaggaagg gcaacagcaa acccgcctgc ttcaaggcaa
     2761 gccatttgtc ttcgggcagg tattgcatga ggttgatgcc gtccgaaaaa atgcggcgga
     2821 atgcggattc gatgtgcttt aaaaaagcag ccgtgtccat ggttgacggc tgcgcgctcg
     2881 gttcggtgtg tatcatcggc ttcctctgtc ggttcccatt aatcggcggc cggtcaaacc
     2941 gcctgccaca gtttagagtt gattttctaa actttaccac aaagtgcgcc gggcaacaat
     3001 ccgccgacct ttcagacggc atcgcgcccc ctcccgtgct aaaatgaccg tttgcatcac
     3061 tgtccgccga ttgccgcact atgacctacc ccatccccaa accccgtgaa aaatcccgtt
     3121 ggcccaatct ttcgcaaggc tcgctgccct tggctttggc gcgttatctg ccgcataagc
     3181 agctcaaagt cgtgctgact ctagatgcgg aacaggcgct acgccttcag acggcatggc
     3241 ggtttttccg tccgcacgat acggcggtgt tcctgccgga ctgggaaacg ctgccttacg
     3301 agcgtttttc gccgcatcag gatttggtgt cggaacggct gtcggcgttg tggcagatta
     3361 agagcggcgc ggcggatgtg ttgtttgtgc cggttgccac ggcgatgcag aagctgccgc
     3421 ctgtgccgtt tctggcaggg cgcacgtttt ggctgaaaac agggcagact ttggatatag
     3481 gccgtctgaa aagcgatttg gtggatgcag gttataacca tgtttcccac gttgttgcgg
     3541 caggcgagtt cgctgtgcgc ggcggtattg tcgatttgtt cccgatgggc agcgaaatgc
     3601 cgtaccgcat cgatttgttc gacgatgaaa tcgacagcat taaaaccttt gacaccgaaa
     3661 cgcaacgcac catttccccc gtttccgaaa tccgcctgct gccggcacac gagttcccca
     3721 ccgacagcga ggcgcaaaag attttccgca gccgcttccg agaagaagtc gacggtaatc
     3781 cgaacgatgc ggctgtgtac aaagccgtca gcaacggtca tttcggcgcg ggcgtggaat
     3841 actacctgcc gctgtttttt gaaaacgagt tggaaacgct gtttgactat atcggcgaag
     3901 atgcgctgtt tgtctcttta ggcgatgttc atgccgaggc aaaccgtttt tggagcgatg
     3961 tcaaatcgcg ttacgcgatg gcgcagggcg acgaaaccta tccgcctttg cttccacagt
     4021 atttgtatct ctctgccgat gtgttcgcag gccgtctgaa aaactacgga caggtgctgc
     4081 ccgatgtttc cggcaaggaa cacaccctgc ctgaccttgc cgtcaaccgc caatccgacg
     4141 agccgttgca ggcattgaag gattttcaga cgacctttga cgggcggatt ctgctgtgcg
     4201 ccgaaagctt gggacggcgc gaaaccatgc tcggtttctt gcagcaaaac ggtttgaaag
     4261 ccaaacctgt gtccgactgg cagggcttct tgtcggcgca tgagccgctg atgattacgg
     4321 tcgcgccgtt ggcatacggg ttcaaactgg gcggactgca atcgccgaac caacagcaaa
     4381 ctacttccgc ctccgaggga gaaggcgatg cggttaccga ccaaaccgaa ttttccgcag
     4441 ccgcaacaaa ccctctccct agccctctcc cgcaggagag ggaacaaagt gccgccgccg
     4501 tttcagacga cctgaaagcc aaaagcagcc tgcatctcgt cgcaagtaat ctgcacgggc
     4561 aaatccgaca gcaacctact ccctcccccg tgggggaggg ttggggagag ggcaaagcag
     4621 ttgccgctca aaccgaattt cccgcatccg caacaaaccc tctccctagc cctctcccac
     4681 aggagaggga acaaagtgcc gccgccgttt cagacaacct gaaaaccgaa agcagcctgc
     4741 cccccggtaa aagtaatctg cacgggcaaa tccaacagca acctgccccc tcccccgtgg
     4801 gggagggttg gggagaaagc aaagcggttg ccgaccaaag tgccatcgcc gtcatcaccg
     4861 aatccgagct ctaccaatac gtcgcccgtt cgcgcgccca caaccgccgc aagaaacacg
     4921 ccgccgtttc agacggtctg ttgcgcgacc ttgccgaaat caatatcggc gaccccgttg
     4981 tgcacgaaga acacggcatc gggcggtata tgggcttggt cacaatggat ttgggcgatg
     5041 aaaccaacga aatgatgttg ctcgaatacg cgggcgaagc gcagctttat gtgcctgttt
     5101 cgcaactgca tttaatcagc cgctactccg gtcaggcgca tgaaaacgtc gccctgcaca
     5161 agctcggcag cggcgcgtgg aacaaggcga agcgtaaagc cgccgaaaag gcgcgcgaca
     5221 ccgccgccga attgctcaac ctctacgccc aacgcgccgc ccaatcggga cacaagtttg
     5281 aaatcaacga gttggattat caggcgtttg ccgacggctt cggctacgag gaaaccgaag
     5341 accaggcagc cgccatcgcc gccgtgatta aagacctgac acagacgaag ccgatggacc
     5401 gactcgtgtg cggcgatgtc ggtttcggca aaacggaagt cgccctgcgc gctgcgtttg
     5461 tggcggtgat gggtggcaaa caggtcgccg tactcgcccc gaccacgctt ctggtcgagc
     5521 agcacgcgca aaacttcgcc gaccgtttcg ccgatttccc cgtaaaagtc gccagccttt
     5581 cgcgtttcaa caacagcaaa gccaccaaag ccgcgctgga aggcatggcg gacggcacgg
     5641 tcgatatcgt tatcggcacg cacaaattgg tgcaggacga catcaaattc aaaaacttag
     5701 gtttagtgat tatcgatgaa gaacaccgat tcggcgtgcg ccagaaagag cagctcaaac
     5761 gcctgcgcgc caatgtcgac atcctcacca tgaccgccac accgattccg cgcaccctca
     5821 gcatggcgct cgaaggtctg cgcgacttct cgctgattac taccgcgccg agccgccgcc
     5881 tcgccgtcaa aacctttgtc aaacccttca gcgaaggcag cgtgcgcgaa gccgtattgc
     5941 gtgaactcaa acgcggcgga caagtgtttt tcctgcacaa tgaagtggat acgattgaga
     6001 atatgcgcga gcggctggaa accctgctgc ccgaagcccg catcggcgtg gcgcacggac
     6061 aactgcgcga gcgcgagctg gaacaagtca tgcgcgactt tttgcagcaa cgatttaacg
     6121 tgttgctctg ttccaccatc atcgaaaccg gtatcgatat ccccaacgcc aacaccatca
     6181 tcatcaaccg cgccgacaaa ttcggactgg cgcaactgca ccagcttcgc gggcgcgtcg
     6241 gccgcagcca tcaccaagcc tacgcctacc tgctcacgcc cgaatacatc actaaagacg
     6301 cagaaaaacg cctcgatgcc attgcggcgg cagacgaact cggcgcaggt tttaccctag
     6361 ccatgcagga tttggaaatc cgtggtgcag gcgaaatcct tggcgaagga caatccggcg
     6421 aaatgataca ggtcggcttc acgctctaca ccgaaatgct caaacaagcc gttcgcgacc
     6481 tcaaaaaagg ccgccagccc gacctcgacg caccgttggg catcaccacc gaaatcaaac
     6541 tgcacagccc cgccctgctg cccgaagatt actgccccga catccacgaa cggctcgtcc
     6601 tctacaaacg cctcgccgtc tgcgaaaccg tgcaacaaat caacaccata cacgaagaac
     6661 tcgtcgaccg cttcggcctg cccgaacaac ccgtcaaaac ccttatcgaa agccaccact
     6721 tacggcttat ggcaaaagaa ttgggtatcg atgccattga tgcggccggc gaagcggtaa
     6781 cggtaacctt tggtaaaaac aataatgtcg atccaaccga aatcatcctg ctgattcaga
     6841 acgacaaaaa ataccgcctt gccggcgccg ataagctgcg gtttaccgca gagatggaaa
     6901 atatcgaggt cagaatcaac accgtaaaaa acgttttaaa aaccttgcaa aacagatgcc
     6961 tgcccaaata aagccgacac cgcaatgccg tctgaaacac cgttttcctt gtccgaaagc
     7021 cgccattatg aatttgaagg aaactccact ataatacggc attcagattt ccagacggca
     7081 tcgcgcccgt caaaccgcac acaaaccaaa aggaaataca tgttccgtac catgcttggc
     7141 ggaaaaatcc accgcgccac cgttaccgaa gccgatttga actatgtcgg cagtattacc
     7201 gtcgatcaag acctgttaga cgcggcaggc atctacccca acgaaaaagt cgccattgtc
     7261 aacaacaaca acggcgaacg ttttgaaacc tataccattg cagggaaacg cggcagcggc
     7321 gtgatttgtc tgaacggtgc tgcagccagg ctggtacaga aaggcgatat cgtcatcatc
     7381 atgtcttacg tccaactctc cgaacccgaa atcgccgcac acgaacccaa agtcgtcttg
     7441 gtagacggaa acaacaaaat ccgcgacatc atctcctacg agccgccgca caccgtgctg
     7501 taattccgca aacggacatc gattatggat attaaaatca acgacatcac cctcggcaac
     7561 aactcgccct tcgtcctatt cggcggcatc aacgttttgg aaagcttgga ttccaccctc
     7621 caaacctgcg cgcattacgt cgaagttacc cgaaaactcg gtattcccta tatctttaaa
     7681 gcctctttcg acaaggcaaa ccgttcctcc atccattctt atcgcggcgt aggcttggaa
     7741 gaaggcttaa agatttttga aaaagtcaaa gcagagttcg gcatccccgt cattaccgac
     7801 gtacacgaac cccatcagtg ccaacccgtc gccgaagtgt gcgatgtcat ccagcttccc
     7861 gcctttcttg cgcggcagac cgatttagtg gttgccatgg caaaaactgg caacgtcgtc
     7921 aacatcaaaa aacctcagtt cctcagcccc tctcaaatga aaaacattgt ggaaaaattc
     7981 cacgaagccg gcaacgggaa actgatttta tgcgaacgcg gcagcagctt cggctacgac
     8041 aacctcgttg tcgatatgct cggtttcggc gtgatgaaac agacttgcgg caacctgccg
     8101 gttattttcg acgttaccca ttccctgcaa acccgcgatg ccggttctgc cgcatccggc
     8161 ggtcgtcgcg cacaggcttt ggatttggca cttgcaggca tggcaacccg ccttgccggt
     8221 ctgttcctcg aatcgcaccc cgatccgaaa ctggcaaaat gcgacggccc cagcgcgctg
     8281 ccgctgcacc ttttagaaga ttttttaatc cgcatcaaag cattggacga tttaatcaaa
     8341 tcacaaccga ttttaacaat cgagtaacac ggtttcgcct tatgatgcag actttccgaa
     8401 aaatcagccg gtatgtcgca accttgtggc tcggtatgca gattatggcg ggttatatcg
     8461 ccgcaccggt gctgttcaaa atgctgccca aaatgcaggc gggcgaaatt gccggcgtat
     8521 tgttcgacat cctctcttgg agcgggcttg ccgtttgggg cgcggtactg gctgccgcct
     8581 ttgccgccct aacccggcgg caaaccgccc tgctgctttt tttattgtcc gcccttgccg
     8641 ccaaccgatt cttgattaca cccgttatcg aggcactgaa atacggacat gaaaattggc
     8701 tgttgtcgtt tgtaggcgga tccttcggaa tgtggcacgg catttccagt attgttttta
     8761 tggcaaccgc cctactttca gcagttttaa gttggcggct ttccggcaaa gatgccgtct
     8821 gaagccctcc cattttttta cctcccttca cttcacttgg agaacattca tgagcgcaat
     8881 cgttgatatt ttcgcccgcg aaattttgga ctcacgcggc aaccccacag tcgagtgtga
     8941 tgtattgctc gaatccggcg taatgggacg cgcagccgta ccgagcggcg cgtccaccgg
     9001 tcaaaaagag gctttggaac ttcgcgacgg cgacaaatcc cgttattcgg gcaagggcgt
     9061 attgaaggcg gtcgaacacg tcaacaacca aatcgcccaa gccctcattg gtatcgatgc
     9121 caacgagcaa tcttatatcg accaaatcat gatcgaattg gacggtactg aaaacaaagg
     9181 caatttgggt gcgaatgcga ctttggcggt ttctatggcg gttgcacgcg ccgctgccga
     9241 agactcaggc ctgccgcttt accgctactt gggcggcgca ggcccgatgt ccctgcccgt
     9301 accgatgatg aacgtcatca acggcggcga acacgccaac aacagcctga acatccaaga
     9361 gtttatgatt atgcccgtcg gcgcaaaatc tttccgcgaa gcgttgcgct gcggtgcgga
     9421 aattttccac gccttgaaaa aactgtgcga cagcaaaggc ttcccgacca cagtcggcga
     9481 cgaaggcggt ttcgccccca acctgaacag ccacaaagaa gccctgcaac tgatggtcga
     9541 ggcgaccgaa gccgccggct acaaagcggg cgaagacgta ttattcgcat tggactgcgc
     9601 ctccagcgag ttctacaaag acggcaaata ccacttggaa gccgaaggcc gctcctacac
     9661 caacgcggaa tttgccgaat atctggaagg cctggtcaac gagttcccca tcatctccat
     9721 cgaagacggc atggatgaaa acgactggga aggctggaaa ctgctgaccg aaaaactggg
     9781 cggtagagtt caattggttg gcgacgactt gttcgtaacc aatccaaaaa tcttggccga
     9841 aggcatcgaa aaaggcgtag caaacgcatt gctggtcaaa gtcaatcaaa tcggtacttt
     9901 gagcgagacc ctgaaagccg tcgacttagc caaacgcaac cgctacgcca gcgtaatgag
     9961 ccaccgctcc ggcgaaaccg aagacagcac cattgccgac ttggcagtcg ccaccaactg
    10021 tatgcagatc aaaaccggtt ctttgagccg ttccgaccgc atggcgaaat acaaccaact
    10081 gctgcgtatc gaggaagaat tggcggaagc cgccgactac cccagcaaag ccgcattcta
    10141 ccaactgggc aaataaaaaa ggttaaggta tgaagtgggt aactgtcgtt ttatccttcg
    10201 cacttgtctg ttgccaatac agcctctggt tcggcaaagg cagcatcgga cgcaacagca
    10261 gtctgagaga acagattgcc gttcaagaag aaaaaaacca gacactcgcc ctacgcaatc
    10321 attcccttgc cgccgaagtc tatgatttgg aaaacggtca agaagccatt tcggaaatcg
    10381 cccgggtaga actgggttat atccaagacg gtgaaacctt ttaccgactc atcaggcata
    10441 accggtaata ccgtcaaaaa gccgtccgaa ccaatgttcg gacggctttt atttcaacaa
    10501 actgtcagac agcccctcat cctcccccga caaaccgcaa tccagcctga catccccctc
    10561 gacgcaacag cagcacggca gtatctcgtc ccgccccaaa aaagccaaag gcggctcccg
    10621 ataagtaacg cttccctcca aaatcttcac tcggcacgat ccgcaatatc cgcttcggca
    10681 ctgatattcc accatatgcc ccgtccgttc caagccttcc aacagagtct cgccctccaa
    10741 gagttcaaaa aaacccttat tcgtaccaat gcgcgccatt tccgaccaat caaa
//
LOCUS       DAXHRP010000056        10730 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.056, whole genome shotgun sequence.
ACCESSION   DAXHRP010000056 DAXHRP010000000
VERSION     DAXHRP010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10730
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.056"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(26..652)
                     /locus_tag="ACFM72_001064"
     CDS             complement(26..652)
                     /locus_tag="ACFM72_001064"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HFC6257641.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFHRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDAAKVAAFIATANRLFR"
     gene            complement(711..1202)
                     /gene="greB"
                     /locus_tag="ACFM72_001065"
     CDS             complement(711..1202)
                     /gene="greB"
                     /locus_tag="ACFM72_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HFC6257642.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            complement(1302..2846)
                     /gene="purF"
                     /locus_tag="ACFM72_001066"
     CDS             complement(1302..2846)
                     /gene="purF"
                     /locus_tag="ACFM72_001066"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HFC6257643.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANERSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            complement(3054..3551)
                     /locus_tag="ACFM72_001067"
     CDS             complement(3054..3551)
                     /locus_tag="ACFM72_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HFC6257644.1"
                     /translation="MNNLPVADLLVSAIIAACIVLSAMRGVIAEAGSMAAWVVAFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVILASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            complement(3544..4542)
                     /gene="ftsN"
                     /locus_tag="ACFM72_001068"
     CDS             complement(3544..4542)
                     /gene="ftsN"
                     /locus_tag="ACFM72_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC6257645.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            complement(4555..5829)
                     /gene="folC"
                     /locus_tag="ACFM72_001069"
     CDS             complement(4555..5829)
                     /gene="folC"
                     /locus_tag="ACFM72_001069"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HFC6257646.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKVGTLTSPHLLRYNERIAVNAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPKSLLSHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDGPARNRNALPFPALRGTYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            complement(5861..6307)
                     /locus_tag="ACFM72_001070"
     CDS             complement(5861..6307)
                     /locus_tag="ACFM72_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HFC6257647.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAAALSGSSMVTPYALF
                     LQWDTGGKTVRHCITHDMADPESYRRLKVWVLWRQPKKTAETDTPS"
     gene            complement(6312..6671)
                     /locus_tag="ACFM72_001071"
     CDS             complement(6312..6671)
                     /locus_tag="ACFM72_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257648.1"
                     /translation="MYFVDRTAVVLKPTARFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            complement(6744..7472)
                     /locus_tag="ACFM72_001072"
     CDS             complement(6744..7472)
                     /locus_tag="ACFM72_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC6257649.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            complement(7645..8424)
                     /gene="rsmA"
                     /locus_tag="ACFM72_001073"
     CDS             complement(7645..8424)
                     /gene="rsmA"
                     /locus_tag="ACFM72_001073"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HFC6257650.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            8621..9331
                     /locus_tag="ACFM72_001074"
     CDS             8621..9331
                     /locus_tag="ACFM72_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC6257651.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFGDADYFKVPSNGEAAHS
                     EKAFDAEKIKAFLHERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAKIPECR
                     HICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKK
                     AAAYRAFFEMAGLCEKQL"
     gene            9516..10718
                     /gene="trpB"
                     /locus_tag="ACFM72_001075"
     CDS             9516..10718
                     /gene="trpB"
                     /locus_tag="ACFM72_001075"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HFC6257652.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPE
                     FWEAFRHDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVESGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
BASE COUNT         2184 a         2775 c         3108 g         2663 t
ORIGIN      
        1 cattccagcg gcaatttttg ttgctttaac ggaataggcg gttggcggtt gcgataaagg
       61 cggcaacttt ggcggcatct ttttttcctt tcgatgcttc cacgccgccg gatacatcga
      121 ccgcttccgc tccggtgatg cggacggctt cgccgacgtt ttcaggggtc agcccgccgg
      181 caagtaccca cggtttgccc gaatattccg ccagcagcgt ccagtcgaag cggtgtccgg
      241 tgccgccgta ttccgaagga tggtaggcat cgaaaagcag tgcctgagcg tcggggaagc
      301 ggtcggcggc gtttcggatg tctgatgtcg tctgaacacg aatggccttg atataggggc
      361 ggtggaactg acggcagaat gtgtcgtctt cgtcgccgtg gaattggatg atgtgtatcg
      421 gcacttcggc aaggatgcgg cggatgtttt gcgcgctttc gttgacgaaa agggcgacaa
      481 cgctgacaaa cggcggcagt gcggcggtga tttttttggc gcgggcaata tcgacggccc
      541 ggctgctgcc ttggaaaaag accagcccga cggcatctgc acctgccgct acggcggccg
      601 atgcgtcttc cggtgtggtg atgccgcaga ttttggtgcg gattttcctc attcggtatt
      661 cctttatttg ggaaacggcg cgcttgcacc gtttcagacg gcattcccga tcagtcgatt
      721 ttgatgtatt cgacagaaag gatttcaatt tcctcacgcc cttccggcgt gttcaaaacc
      781 acttcgtcgc cttcgcgcgc tttaatcaga caacgagcca gcggcgaaat ccaagaaatt
      841 ttgttttgcg cggtatcgat ttcatcgatg ccgacgattt tgacggtttg ctcgcgcccg
      901 tcgccgcgca acaggccgac ggtcgcgccg aaaaatactt ggtcggtcgc ttcgcgcaat
      961 tcgggatcga cgacgacggc ggactccaaa cgcttggtca ggaaacggat gcggcggtcg
     1021 atttcgcgca tacggcgttt gccgtaaaga tagtcgccgt tttcgctgcg gtcgccgttg
     1081 cctgccgccc agttgacgat ttggacgatt tcggggcgtt ctttgttgac cagttgataa
     1141 agctcgtctt tcaatgcctg ccatccggcg ggcgtaatgt agtttttggt ttcggtactc
     1201 atattgtgtg cggatgaaac gggaaatgtg atgccgatat gggaaatgcc gtctgaaaac
     1261 ccggcgttcg gatttcagac ggcatcgcgg tttgggaagc cttattcttc gtcgcccgca
     1321 tcgctgatgc tgatgctgtg ttccatcctg ctcgggtgga ttttcagacc gccgcagccg
     1381 gatttctcgg cagacaggcg gtcgaggtag gcatcatcga tgtcgccggt ctgataaatg
     1441 ccgttgaaac aggacgaatc gaaggattcg attttcggat tgagtgcttt gacgacggct
     1501 tccaaatcgc tcaaattttg gaacacgatg ccgtctgcgc cgatttcggc ggcgatttcc
     1561 gccgcgctgc gctcgttggc aatcaactct tcgcgcgtgg gcatatcaat gccgtacaca
     1621 ttgggatagc gcacttcggg cgcggcggag gcgatataga ctttgcgcgc gcccgccgcg
     1681 cgtaccattt cgacgatttc gcggctggtc gtcccgcgca cgatggagtc gtccaccagc
     1741 aacacgcttt tgcctgcaaa ttcggtttcc atcgggctga gtttttggcg cacggatttt
     1801 ttgcgcgtcg cctgtccggg cataataaag gtgcggccga tatagcggtt tttaatcaaa
     1861 ccctcgcggt agggtttgtc gagatggacg gcaagctcca tcgcgctggg gcggctggtg
     1921 tcggggatgg gcatcacgac atcgatgccg tccacgggca gctcgcgttt gattttttcc
     1981 gccagcgaca cgcccatatc caagcgcgat tggtaaacgg atacgccgtc aatcacagag
     2041 tcggggcggg caaaataaac atattcaaaa aggcaggggc tgagtttggc acggtcgctg
     2101 cattggcggg caatcattgt gccgtcaaag ccgacaaata ccgcttcgcc cggccggatg
     2161 tcgcgttcca aatcgtaggt aagcgcgttg aaggcgacgg attcggaggc gacggcatag
     2221 gattttctgc cttcgctgtc ggtttgcgaa cccaatacca gcgggcggat gccgtaaggg
     2281 tcgcggaagg cgagcatacc gtagcccgca atcatggcaa tcacaccgta tgcgccgcgc
     2341 accaggcggt ggacttgggc aacggcgttg aaaatattgt cggcattgag ccggtgcggg
     2401 tcggcgtttt tagagacttc gcggcgtaat tcgtgcgcga atacgttgag caagacttcg
     2461 gaatcggagc tggtgttgac gtggcgcagg tgtttgttac acacgttttc atacagttcg
     2521 gcagtgttgg tgaggttgcc gttgtgcgcc aaaacgatgc cgaacggcga gctgacgtag
     2581 aaaggctgcg cctccgcgct gctgcctgcg ttgcccgcag taggataacg gacgtgggcg
     2641 atgccggcgt tgccggtcaa atcgcgcata ttgcgtgtgc ggaacacttc gcgcaccatg
     2701 cctttgcctt tgtgcatatg gaaggtaccg ccttccgccg ttgcaatgcc cgccgcatcc
     2761 tgccccctgt gctgcaacat ctgcaaaccg tcgtacagaa gctggttcac gggttcatga
     2821 ctgaccaaac ctaatacgcc gcacatatcg tcttctccga ttcgaggttt aagggtaaaa
     2881 cggaattata aagcaaacgg tggttttttg cctgaattgt tgacaatatt tgagtgaagg
     2941 acagataggt gggtttatgg aggataagat ttaatctgtg atatggctga ggaaaggaaa
     3001 aaacatttca gacggcataa aagagaatgc cgtctgaaat atccgtatgg caatcaatcg
     3061 tcttccggag tttccgccgt gccgccgcta tggttcaaca cggcttcgga aagcgatacg
     3121 aaaaacggca gtgtgtaaga ttgccgccat tcttcggtat cgggcaggtc ggtttttgaa
     3181 gcgagtatga ccagcagggt aataatcaaa atgcctttca atgcaccgaa tacgccgccc
     3241 aaaatgcggt tggcaaagcc caaaccgacc gccgaaactg ccccggtcag cagcgagcgg
     3301 agtattttct ggatcagaca ggcaatgacg aatagggaaa tgaacgacag agccaatgca
     3361 aacaggcggg gttggaacga tgcaaaggcg atgtcggcga agggtgcggc aaagagtttg
     3421 gcgaaaaaaa aggcaaccac ccatgccgcc attgagccag cctccgcaat cacgccgcgc
     3481 atcgcggata gcacgatgca ggcggcgatg atggcggaga cgaggaggtc ggcaacgggg
     3541 aggttattca ttcgttacct gaccggcgat accgtgtacg cgcaatttgt tcaaatcgcg
     3601 ttcggcatcc cttgcgtttt tatagttgct tgatttgacg cggtaaactt tgccgttgtc
     3661 ggtcataatt tcggtgatgg tcgaatcgat acccgccgcc ttcattttgc gctggaggct
     3721 taaggcgcgt tctttttcgg cataacctgc ctgaatggcg gcttttttac cggatttttc
     3781 cttctcggcg gttttggtct tgtccgcttt gtcggttttt tgtgccgttt cgtgtttttt
     3841 gccgtccgaa cggtcttttt cggctgtttt tttgctttca gccttgtcgg cttttttcgc
     3901 ttcttttacc gcgctgtcgg attttgccgt atccggtttg gttttttcgg cggcagtttt
     3961 cggtttgtcg gcaacttttt cggcggtttt ggtttctttg gctttgggct tggctttggc
     4021 agtgcgttcc gctttttgcg gttttgtttc ggcagtgcgt ttcggttttt caaccgctac
     4081 cgtatccgta ctgtcggcag ttgccggcac tttttcggca gcgcgttgtt ttgcctgctt
     4141 cggtgcggtt ttggcggttt ctgcctgttg cagtttctcg gatgcttcca aacctttgat
     4201 gttgctgtct tcgaggcggt cgttaatcag caccagcggc gcgcctacgt tttcaggctc
     4261 gctgatttcg ctgtcggcgg cagaaggctt gtcttcgcct gccaagtcct gcggtttgtc
     4321 ggcggcggat ttcaaggcag gggtttgtgc cgcacctgcc gctttgtttt ctacgccgct
     4381 tgtttcgccg gcagtctgtt cggcagggcc ggaactgagg gcggctgcca gcaggatgca
     4441 ggaggcggca accaggcaac ttgccgttac gaggcggcgg cggttgcgcc gtttgagttg
     4501 ttcgtaaccg ctcaggactt cgttttgttt gttttcggac atagaagttt ccttttaaag
     4561 taccgacatg acatcggcaa cggtatgaaa tgagccgaaa acgacgattc tgtcgttctc
     4621 gcccgctttt gaggctgccg cccggtatgc ttcgcggacg gcggcgaatg tctgtatgtt
     4681 ttcgatgctg tgttcgtgca gtttgttttg caggctctcg agcgtcatgc cgcgcggtac
     4741 gtccaacggt gcgatatacc actcgtcaaa ctggtcttta acgatttcca acacgccgtc
     4801 tatgtctttg tcggacagca tactgaatac ggcggtgcgt ttttgcgcaa acgccaaatt
     4861 aatcaggctg cggcgcaggg cgcgggcagc gtggggattg tgtccgacat ccaaaacggt
     4921 cagcggacgg ccgggcagga cttggaagcg gccggggttt tcaaccagca gcaaaccgcg
     4981 tttgatggcg ccgatgtcca caggcaattt gtcgttcaag cattccaata cggtcaacgc
     5041 gcaggcggcg ttggaaagct ggtatgtgcc gcgtaatgca gggaaaggca gggcattgcg
     5101 gttgcgtgcg gggccgtctg aatgttgcgg ccggaagcgg tagttccatt ggatgttttc
     5161 catcgcgtga aactcgaaat cgcgctgcac catcagcagt ttcgcgccta tggcttcggc
     5221 gtgtgaaagc aacgatttgg gcgcggggtt ttgaccgcag atggcgggtt tgccgctgcg
     5281 gaacacgcct gctttttcaa agccgacctg ctcgaccgta tcgcccaaaa atgcctgatg
     5341 gtccaaatcc acgctggtaa ccaccgcgca atcgccgtca aacgcgttga ccgcgtccaa
     5401 gcgtccgccc aagccgactt ccaatatcat cacgtcaacc tgttcgcgca tgaagatgtc
     5461 gaccgccgcc aaggcattga attcaaaata agtcagcgat atttcgccgc gcgccgcttc
     5521 gatgcgctcg aaagaggcaa taatcgtatc gtccgaaacg ggttcggcgt tgacggcgat
     5581 gcgttcgttg taacgcaata aatgcgggct ggtcagcgta ccgactttaa agcctgcctg
     5641 tttgtaaatc tgtgtcaggt aggcgcagac cgaacctttg ccgtttgttc ccgcgacaac
     5701 gacgacgggg cattgcggcg tgagcttcat ccgttttttc acttcgccta cgcgttccaa
     5761 gcccatatcg atcaagccac cgctgtgggc ggtttccaaa tgggagagcc agtcttgcag
     5821 tgttttcatt gagtgttccg tgttcaaatg ccgtctgaaa tcagcttggt gtatcggttt
     5881 cggcggtttt tttcggctgc cgccaaagca cccagacttt cagccgccgg taggattccg
     5941 ggtccgccat atcgtgggtg atgcagtggc ggacggtttt gccgccggtg tcccattgta
     6001 agaataaggc ataaggcgta accatactgc tgcccgacag tgccgccgcc tttgccgttt
     6061 tttctttgcc ggatacgatt tccgcctgtc cgtcgcggtc tatggtaatg gcggttatgg
     6121 catggcggtg tttcagattc gttatcctga gcgagtatgc gtaacttgcc gccaaagccg
     6181 ccaaaccgaa ccacatcatc cggccgtaaa accaggtcag gcagacggca agggaagccg
     6241 agtggagcga tacggtcagg atgttcagga tgcgggacgg cctcaatgcc gtctgaaagg
     6301 cgcgcacagc cttacatcat gttgtcgaac acgggggtaa tgttcaattc cgcttcttcc
     6361 atgtccaaca ccatatcgtg gatttcgatg tcgaaaaatt cccaaaacgc cttcagcccc
     6421 atatcttgcg gccatttatc cttattgatg tcccaacctg ccagctccgc ctcgaaaatc
     6481 tggcggtagc gttcgtcgaa gtaggaaacg acggcttccg gttcgtcgaa ctgcggaacg
     6541 aggaagacgg aacagttggc acgaagctgc tctatggtca ggtcgggcat attttcgtcg
     6601 gtgcttttga gccattccaa aaagcgcgcg gtcggcttga ggacgacggc ggtgcggtca
     6661 acaaaataca tggttttctt tctcaatcat cttgcggtgt cgggatatgc tgtctgaacg
     6721 ttcggttttc agacggcata gcatcaatgg gtcatgacct gttgcaggaa ctgcttggcg
     6781 cgttcgtgtt tcgggttggt aaaaaacgct tccggcgttt cgtcttcgag gatttgccct
     6841 ttatcgacga aaatcacgcg gtcggcaact tcgcgggcaa accccatttc gtgggttacg
     6901 cacatcatgg tcatgccgct ttctgccaag tctttcatca ctttcaacac ttcgccgacc
     6961 atttcggggt cgagtgcgga ggtcggttcg tcaaacaaca ttacgcgcgg ttccatcgcc
     7021 aaaccgcgtg caatcgccac gcgttgctgc tggccgccgg aaagttggga agggaaggcg
     7081 tcttttttgt gtgccagtcc gacgcgttcc aaaagctcca ttgccttttt ctccgcctgt
     7141 tccgcatttt gccccttaac cttcatcggt gcgagggtaa tgttttccaa cacggtcagg
     7201 tgcgggtaga ggttgaaact ttgaaacaca aagccgactt cttcgcggat tttgttcaaa
     7261 tcggtttttg ggtcggcaac gttgacaccg tccacccaaa tctcgccgct ttcgatgctt
     7321 tcaagctggt tgacggtgcg gatgagtgtg gatttgccgc tgcccgaagg cccgcagacg
     7381 acgaccactt cgcctttttt gatttccaag ttcacgccgt tgatgacgtg caggtctttg
     7441 aaatgtttgt gtacgttttt gaatttgatc atgtcttttc tttcagacgg catttgccgt
     7501 tgcaggttgt cgttacggga gctccatatg atgaagcgtg tagcgtctgc cgtcaaaaaa
     7561 acggtcgttc ggattggtca ggcaggctgc aagcggcagt atcaggggta aaagcaggta
     7621 tttcttcatc ggcttactcc cttttcagac ggccttgccc gccagataat tgctcaacgc
     7681 tacgtatttt tccggcgcga tgtgttcggc acggtcttgc ggattgatgc cgacagcctg
     7741 caaatcatcg tcgcctgcaa gctctttcag gttgttgcgt atggttttgc ggcgttggtg
     7801 gaaggcgagt ttcaccagtt tggcgaaatg ctcgaaatcg tccgccttgc cgatgcggtg
     7861 tttcaccgga atcatacgga cgacggcgga atccactttc ggcgcagggt cgaacgattc
     7921 gggcggtacg tcaatcagca tttccatatc gaaaaaatat tgcagcatca cgcccaagcg
     7981 gccgtagtcg ttgcttttcg gcgcggcaac catacgctcg accacttctt tttgcagcat
     8041 aaagtgcata tcgacgacat cgtccgccac ctccgccagc ttgaacaaaa gcggtgtgga
     8101 aatgttgtac gggaggttgc cgacgatttt ctttttgcct gcgatgccgt tgaaatcaaa
     8161 ctgcaataca tcgccttcgt gaatcaccag tttatccgca aacggcagcg ttttcagacg
     8221 gcatacgatg tcgcggtcga tttcgacaac gtgcaggcgg ttcagctttt tcgccaaagg
     8281 ttcggtaatc gccgccaaac ccggaccgat ttcaatcacg acatcatccg cctgcgggcg
     8341 cacggcgttg acaatatcgc tgataatccg cgtgtcctgc aaaaaattct gcccgaaacg
     8401 cttgcgggct ttgtgttctt tcatcgtgtt tccttttcgg ttgaaacccc gccctttagg
     8461 gcggtagaat cagactctat ttgggagggg cgtaacccct tccaaatcag gatggcacat
     8521 agggcggtgc tttatgtgtc gtcctgtgtg ttgaaacata aatgtgttta cagtatccgt
     8581 ttgatgtcgg cattgtaacc gaaaacggca gggcgtgata atgctgtttg aaggcttgcc
     8641 gtgtttggcg gtttggtgca aaaaccggct gtctgccgtt ttgcctgttg gaggattgaa
     8701 cgtgtctgaa aatctgcttg aaatcgaaac ccatcccttc gattccgtgt tgccgccgaa
     8761 ggctgcggtc atgatgatgg ggacgtttcc gcccaaggaa gacaaacgcg cgatgcagtt
     8821 tcattatccg aatttccaaa acgatatgtg gcgcgtttac gggctggtgt ttttcggcga
     8881 tgcggattat ttcaaagtgc cgtccaacgg ggaggctgcg cactctgaaa aagcgtttga
     8941 tgccgagaaa atcaaggcgt ttttgcacga acgggggatt gcgtcctgtc cgaccgtttt
     9001 gaaggcggta cgtcagcacg gcaatgcgtc cgacaagttt ttaaaggtag ttgaaaccgt
     9061 cgatttggcg gcggtgttgg caaaaatacc cgagtgccgc catatttgta cgacaggcgg
     9121 caaggcgacg gaaatcctgc tcgatattca aggtggcggc atcaaaatgc cgaaaacggg
     9181 cgaaaccgtg ccgtttccgt ttgccggacg ggatttgacg ctgacgcgcc tgccttcgac
     9241 ttcgcgtgcc tatcctttga gtttggcgaa aaaggcggcg gcgtatcggg cgtttttcga
     9301 aatggcgggt ttgtgtgaaa aacagttata attgccgaca atttcccgtt cggacggcat
     9361 gtttgaaaaa tatagtggat taacaaaaat caggacaagg cggcgaagcc gcagacagta
     9421 caaatagtac ggcaaggcgg ggcaacgccg taccggtttt tgttaatcca ctataaattg
     9481 ccgtctgaaa atttgaagca caaggacgaa atctgatgaa gaactaccac gcgcccgacg
     9541 agaagggctt tttcggcgaa cacggcgggc tgttcgtgtc cgagaccctg attccggctt
     9601 tgcaagagct ggcggatgcc tataaggcag cgaaaaacga tcctgaattt tgggaagcgt
     9661 tccgccatga tttgaaacat tatgtcggca ggcccagccc cgtttaccac gccgcgcggt
     9721 tgtccgaaca tctgggcggc gcgcaaatct ggttgaagcg cgaagacttg aaccacaccg
     9781 gcgcgcacaa agtcaacaac accatcggtc aggcactgtt ggcaaaacgc atgggtaaaa
     9841 aacgcgtcat cgccgaaacc ggcgcgggtc agcacggcgt ggcgagtgcc accgttgccg
     9901 cacgcttcgg tatgacttgc gacgtgtata tgggcgcgga cgacatccaa cgccaaatgc
     9961 ccaacgtgtt ccgtatgaaa ttattgggtg cgaacgtggt cggtgtagaa agcggcagcc
    10021 gcacgctgaa agacgcgatg aacgaagcca tgcgcgaatg ggtcgcccgc gtggacgaca
    10081 cgttctacat catcggtacc gccgccggcc ccgcgccgta tcccgaaatg gtgcgcgatt
    10141 tccaatgcgt gattggcaac gaagctaaag cgcagatgca ggaagccatc ggcagacagc
    10201 ccgacgttgc cgttgcctgc gtgggcggcg gatcgaacgc catcggtttg ttccacccgt
    10261 atatcggcga agaaaacgtg cgcctcgtcg gcgtggaggc tggcggtttg ggcgtgaaca
    10321 cccccgatca cgccgcgccg attacttcgg gcgcaccgat tggcgtattg cacggtttcc
    10381 gcagctatct gatgcaggac gaaaacggtc aggttttggg tacgcactct gtttccgcag
    10441 gcttggatta ccccggcatc ggcccggaac acagccatct gcacgacatc aagcgcgtcg
    10501 aatacactgt tgccaaagac gacgaagcac tcgaagcctt tgacttgctc tgccgcttcg
    10561 agggcatcat ccccgcgctc gaatccagcc acgccgttgc ttgggcggtg aaaaacgcgc
    10621 cgaaaatggg caaagaccaa gtgattctgg tcaacctatc cggtcgtggc gacaaagaca
    10681 tcaataccgt cgcgaagctc aaagggatta aactgtaacc tcgtccgtct
//
LOCUS       DAXHRP010000057        10583 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.057, whole genome shotgun sequence.
ACCESSION   DAXHRP010000057 DAXHRP010000000
VERSION     DAXHRP010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10583
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.057"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(124..444)
                     /locus_tag="ACFM72_001076"
     CDS             complement(124..444)
                     /locus_tag="ACFM72_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HFC6257653.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLENVVQSGETLLLKP
                     LAAQ"
     gene            complement(467..1093)
                     /gene="upp"
                     /locus_tag="ACFM72_001077"
     CDS             complement(467..1093)
                     /gene="upp"
                     /locus_tag="ACFM72_001077"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HFC6257654.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            complement(1199..1510)
                     /gene="grxD"
                     /locus_tag="ACFM72_001078"
     CDS             complement(1199..1510)
                     /gene="grxD"
                     /locus_tag="ACFM72_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HFC6257655.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            complement(1611..1798)
                     /locus_tag="ACFM72_001079"
                     /pseudo
     CDS             complement(1611..1798)
                     /locus_tag="ACFM72_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
     gene            complement(1866..2645)
                     /locus_tag="ACFM72_001080"
     CDS             complement(1866..2645)
                     /locus_tag="ACFM72_001080"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC6257656.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRYTAEHIAKLRNQTLEQVAAYTTENFYQLFKKVPDMRAV"
     gene            complement(2650..3000)
                     /locus_tag="ACFM72_001081"
     CDS             complement(2650..3000)
                     /locus_tag="ACFM72_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HFC6257657.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            complement(3004..3981)
                     /locus_tag="ACFM72_001082"
     CDS             complement(3004..3981)
                     /locus_tag="ACFM72_001082"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HFC6257658.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDESENGRKLLQIKIDAVRKII
                     DNVYLTSVRGGLRVVLIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRDRGVAEPEEFLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            complement(4015..5145)
                     /locus_tag="ACFM72_001083"
     CDS             complement(4015..5145)
                     /locus_tag="ACFM72_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC6257659.1"
                     /translation="MFTDENMTAKEELFAWLRHMNQNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRTITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGDISLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            5313..6014
                     /locus_tag="ACFM72_001084"
     CDS             5313..6014
                     /locus_tag="ACFM72_001084"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HFC6257660.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWIIREFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            6157..7950
                     /gene="lepA"
                     /locus_tag="ACFM72_001085"
     CDS             6157..7950
                     /gene="lepA"
                     /locus_tag="ACFM72_001085"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HFC6257661.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKVPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPASEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            8093..9112
                     /gene="lepB"
                     /locus_tag="ACFM72_001086"
     CDS             8093..9112
                     /gene="lepB"
                     /locus_tag="ACFM72_001086"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HFC6257662.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFAAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(9331..9480)
                     /locus_tag="ACFM72_001087"
     CDS             complement(9331..9480)
                     /locus_tag="ACFM72_001087"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257663.1"
                     /translation="MNWQAVKTGKTKHAGNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(9526..10431)
                     /locus_tag="ACFM72_001088"
     CDS             complement(9526..10431)
                     /locus_tag="ACFM72_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC6257664.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLSFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
BASE COUNT         2563 a         2797 c         2695 g         2528 t
ORIGIN      
        1 tatcgtcctg tgtgttgaaa catcattgcc cgtatcctga aatagaaaag aaaatgcccg
       61 ttttacggtc ttctttccga taaaatgccg tctgaaacgg atttcagacg gcatggtcga
      121 aaattattgc gcggcaagcg gcttgagcag caaggtttcg ccgctttgca cgacattttc
      181 aagcaggtcg atattgggat gcttgccggg atgggcgcgc gcgtcggcaa cgtgttcggc
      241 aaaccatatc aaaccctgtt ctgccgcttc tttgtccaat tttccgtcaa aacgttctgc
      301 caaagcattg tacagcttga gcgaaccgag cttaccctga acggcgggaa tgtggtgaac
      361 cgttttgccg tcggcatcct gaacgtccaa accgcccaga tggtcgattg aaggaaatgt
      421 ggcgagatag tcttggaaat tcatatcaaa tccgaaaatc agtcagttag cgcgtgccga
      481 aaatcttgtc gcccgcatcg cccaagccgg ggatgatgta gccgttctcg ttcaagtggc
      541 tgtcgagcgc ggcggtgtaa atcgtaacgt cgggatgcgc gtcgttgacc gccttcacac
      601 cctcgggcgc ggcaaccagc accagtgcct tgatgttttt gcagcccttg gctttcaaca
      661 ggtcgatggt ggcaaccatc gaaccgcctg tcgccagcat cgggtcgata atcagggcag
      721 gacgttcgtc catgctgtcc acgaatttct cgaagtagga aacgggtttc agcgtttcct
      781 cgtcgcgctg cagtccgact acgctgattt tggcagtcgg aatcaggtcg agtacgccgt
      841 caagcatacc caaacctgca cgcaggatgg gaacgacggt caatgttttg cccttgatgc
      901 ggtcgccttc aatctgaccg caccatccgt cgataaggta tttttcgatt tcaaaatcac
      961 ggcttgcctc gtatgccatc aggcgcgcca gctcgatggc aagcgtccgg aatttgtagg
     1021 tgctgcaatc cgcctccctc atcagggtta atttgtggcg gacgagcgga tggttgataa
     1081 cgttaacgtt catcgcggtg ttccagtgtg attttgagac gcgccattat actttttttt
     1141 gatttgccgg aaaagaaaat gccgtctgaa acacgttcag acggcattgc cgaatccatc
     1201 aggctttcag cagctcttgc agctcgcctg cctcatacat ttccatcagg atgtccgaac
     1261 cgccgacaaa ctcgccgttc acataaagtt gggggatggt cggccaatcg ctgtattcct
     1321 taatgccttg gcgtacttcg ggattttcca atacgttgac ggtaacgtaa tcggtgcagc
     1381 ccgccgcgtt caggatttgc acggcgcggg aagagaaacc gcattgcgga aactgcttcg
     1441 tacctttcat aaacaatacg acgcggtgtg tcgttactac ttctttaatt tggtcgtgga
     1501 tggaagccat cgcttattcc ttttgataaa gttgacaaaa tttgtcaggt aggacgcatt
     1561 atacgcaaaa gcggaaactt cccacaatat ttgctgtata tcgtgcagta tcaatgttgt
     1621 gaacggaaat attcccactc ctcgacaatc ctgctgtccg gcaaatggca cagggcatat
     1681 ccgccgccgc tttcgtcttt ttttgcttcc cgtccgccgc ctttggcaat gcagaatttg
     1741 gaagcggaat ttgccatacc gactgcctca tgcctgtccg aaacgtgttg gcaggcagtc
     1801 agcagcagtg cggacataca tacggatgaa ttgccttcat ggttttcctt atcgtcggca
     1861 cagggtcaga cggcccgcat atcgggtact tttttaaaca gctggtaaaa gttttccgtc
     1921 gtatatgccg caacctgttc caatgtttgg ttccgcaatt tggcgatatg ttcggcagta
     1981 taacgcacga aagccggttc gttctgcctg ccgcgcttgg gtacgggggc gaggaacggc
     2041 gcatcggttt ccactaaaat gcggtcgtcc ggaacgtatt tcgccgcctc ctgaaccaag
     2101 ggtgcgtttt taaaggtaac gattcccgag aaagaaatat aaagccccaa atccattgct
     2161 gcacgggcaa aaccgatgtc ttcggaaaaa cagtggataa cgcccgaatt aacccggcat
     2221 tctttcagga tagacaaggt gtccgccgcc gcatcacgcg tatggacgat aacgggcagt
     2281 ccggtttgat tggctgcttc gatgtggtct gcaaagcgtt tgtgctgcca ggacaaatcg
     2341 cctttgcacc agtaataatc caagcccgtc tcgccgatgc cgaccacttt cggatgggcg
     2401 gctgcagcaa ccatttccgc aatagaaaat tcttcggctt ccttgctgtc gggatgtacg
     2461 cctattgtgc agtaaatatg ttcataaact tcggcgatag cggatacttc ggcaaaactt
     2521 tccctgctga cgctgatggc gagcgcctgc cccacgccgt ttgcttccat gttggacaaa
     2581 acttcgggca ggcgttcttt caaaccttca aaattgaggt ggcagtgcga atcgatgata
     2641 tgcatggcgt tacatggtaa acgtaggtct gctgccgccg attgtgttgc ccagttcgac
     2701 ttcgatctgg tctttgactt tcaggcagtt ttcgtgtttt gtgaatgcca gccccacccc
     2761 tttgggtttg gaggaagtac gcgcaggatt gatccaggcg actttggtcg gcaggaacag
     2821 tttggggaag ttgaggattt ctacggcaag cagaatatcg tccccgatgg aaaatacgtc
     2881 gttggtctgc acaaacagac cgccgtgttc caaaaacggc atgtaggagc tgtacagcag
     2941 attcatgtct ttcagctgca acgacatcat ttttgccgga atattttgtc cgtctgacat
     3001 aattcacccg ttctctttct tcaattccaa atagttgatg agcagatgct cgatctgcat
     3061 tttgacattt aaagtatgaa acccgtaggg ggcaagctgt ttgagcatat cctccgccgc
     3121 aaatacattg cgcggacgga aaccggatac cgtctgaagc agcctgtctt cataagcggg
     3181 ataatagacg ggtttcatgt gttgcaggca caatcccaaa tcgaccagcc atttctgcat
     3241 ccacccgaca aatacgtcga gcggaagttt ctccttatcg aaaagcgcgg cgtaatccaa
     3301 aatcttcaac aaccttggtt ctgccaaaat atctaacagt ttaatccgca acgcacggac
     3361 accgtccgcc tcatcaaaca gcggcgcacc cgaatggaac gccaaaaatt cttccggctc
     3421 cgccacaccc ctgtcgcgca gatatgccaa tgcctcttca tgggaaggag cgggcaaaac
     3481 catcttccgg cagcggcttt taatggtcgg taaaaccttg tccgccgcgt ggctgaccag
     3541 caaaaagacc acttgtggcg gcggctcttc caacactttc aacaaactgt tggcggcctg
     3601 gacattcata ctttccgcag gatggatgag taccacgcgc aaaccgcccc gtaccgaagt
     3661 cagatacacg ttatcgataa ttttcctgac ggcatcgatt ttaatctgca acagtttgcg
     3721 cccgttttcg gattcgtccg acaagggggt gatttcgtaa aaatccggat ggcttccctg
     3781 tccaaacaga tggcaggaca tacattcgcc acagggtttg cagcccggtg caggggtttc
     3841 gcacaacagt gccttcgccg caaagcgggc aaatgtagtt ttccccgtat cttttttgcc
     3901 ggcaaacagc catgcattgg gacgacgctc ccaatgttcc gcaatctgcc gccattgctc
     3961 attatgccac ggataaatca tttcaaacca tccgtccgga aatccatacc gccatcagag
     4021 cagttccaaa tcggggctgg aactttgcgc gcggcggctg cgcaactgta ccgccaaacg
     4081 caaatcgtgt gcggaatcgg catttttcaa tgcttcttgc agggaaatat cgcctttttc
     4141 atacaattgg taaaggtgtt gatcgaaggt ctgcataccc agggtagtgg attttttcat
     4201 cacttctttg atttcatgga tgttgccgtt gtgaatcaac tccgaaatca ggggcgaatt
     4261 gagcagcacc tcgactgccg ccaccctgcc cttgccgccg tctcgcggaa cgaggcgttg
     4321 cgaaataaac gcctgaaggt tgagcgacaa atccgtcagc aattgttcgc gccgctcctc
     4381 ggggaaaaag ttgatgatgc ggtcgagtgc ctgattggtg ctgttggcgt gcagcgtcgc
     4441 catacacaaa tgccccgttt cggcaaaggc aatggcgtag tccattgttt cgcggtcgcg
     4501 gatttcgccg ataaggatga catccggcgc ctgacgcagc gtgtttttca acgccgccat
     4561 ccagttttcc gtatccacgc cgacctcgcg ctgggtgatg atgcagtttt tgtgttcgtg
     4621 gacaaactcg atcgggtctt cgatagtgat gatgtgtccg aacgaatttt cattgcggta
     4681 gtcgataagc gaggcaagcg aagtcgattt gcccgagccg gtgccgccga caaaaataac
     4741 cagcccgcgt tttttcagcg cgacatcctt caagaccggc ggcaggttca ggctttcaaa
     4801 cttgggaatc ttgctggtaa tcgtacggaa taccaacgcc gtcgcgccgc gctgtatcat
     4861 cgcattgacg cggaagcggc tggtgtccgg caggctgatg gcgaagttgc actcgttggt
     4921 cgatgaaaat tcttccgcct gcttcgcact cataatcgaa aaggcgattt ccatacattt
     4981 ttccgccgtc agcggttcgt ccgtgatgcg ggtgattttg ccgtccaact tcatcgcggg
     5041 cgggaaatgg gtcgtcacga acaggtcgga acctttgttt tggttcatat ggcgcagcca
     5101 tgcgaacagt tcttcctttg cggtcatatt ttcatcggta aacatcctcg tcccctaatc
     5161 ttcaaacaat ctgtaccttc ccattctacc aaaaacccgc cgtgccgtct gaaaccgttt
     5221 cagacggcac ggacaaacca cctccactca atcctgccgt gttagcgtgt ataattcggc
     5281 attctatccg aaattcacag caggtcagca atatgtcttt gaaaacagta gccgttatcg
     5341 gcgcaatgga acaagaaatc gagcttttgc gcgagatgat ggaaaatgtc aaagccgtct
     5401 ctttcggcaa gtttgccgcc tatgaaggcg aattagcggg aaaacgcatg gtgcttgcat
     5461 tgagcggcat cggcaaggtc aacgcggcgg ttgcaacggc ttggattatc cgtgaattcg
     5521 caccggactg cgttatcaac accggcagcg cgggcggctt gggcaagggt ttgaaagtcg
     5581 gcgatgtcgt ggtcggcaca gaaatcgcgc accacgatgt cgatgtaacc gcattcggct
     5641 atgtttgggg acaagtgccg caactgcccg ccgtatttgt ttcagacggc ctcttggtcg
     5701 gcaaagcaaa acaggcggcg gaagtgtttg aaggcgcggc ggtagaacaa ggcctgattg
     5761 tcagcggcga ccgcttcgtc cacagcagcg aaggcgtggc ggaaatccgc aagcacttcc
     5821 ccaaagtcaa agcagtggaa atggaagcgg cggcgattgc ccaaacctgt catcagttgg
     5881 aaacgccttt cgtcatcatc cgcgcggttt ccgattcggc ggacgaaaag gcagacatca
     5941 gctttgacga atttttgaaa acggcggcgg caagttctgc aaaaatggtg gcagaaatcg
     6001 tcaaatcttt ataaaacctt tatcaaatca tgccaaaaca gcggttttcc gttagaatat
     6061 cgggctattt ccacgttgca cccgatattc ggacgcaacg ccgtttgttc agacggcatt
     6121 tcccaaaccc actgtccgac attcaaaaca actctaatga aaaatatccg aaatttctcc
     6181 atcattgccc acatcgacca cggcaaatcg acgcttgccg accgcttcat ccaatattgc
     6241 ggcggtttgg atttgcgcga aatgagtacg caggtactcg attccatgga catcgaaaaa
     6301 gagcgcggca ttaccatcaa agcgcaaacc gccgcgctca actataaagc gcgcgacggg
     6361 caggtgtatc agcttaattt gattgacacg ccgggacacg tcgacttctc ttacgaagta
     6421 tcccgttcgc tgtcagcttg cgaaggcgcg cttttggtgg tcgatgcgtc ccaaggtgta
     6481 gaagctcaaa ctgtggcgaa ctgctatacc gcgattgatt tgggcgtgga agttgtgcct
     6541 gttttgaaca aaatcgacct gccggccgcc gaccccgagc gcgtggagca ggaaattgaa
     6601 gacatcatcg gcattgatgc cgttggtgcg gtacagtgtt ccgctaaaag cggcattggt
     6661 gtggaagatg ttttggaaga aatcgttgcc aaagtccctg cgccaaccgg tgatgaaaat
     6721 gcgccgttgc aagcggttat tgttgattca tggtttgaca actacgtcgg cgtagttatg
     6781 ttgattcgtg tgaaaaacgg caccatcaag ctgaaagaca aagtgcgctt tatgagcacc
     6841 aaggcggaaa ctcaggttga gcagctgggc gtttttacgc cgaaatcggt tcaaaaacaa
     6901 gaactcaaag ccggagaagt gggctttttg attaccggcg tgaaagaatt gggacaggcg
     6961 aaagtcggcg atacggttac tttggttgcc aaccctgcct ctgagccgct gcccggcttc
     7021 caagaggtgc aaagccaagt attcgcgggt ctctaccccg tagaaagcca cgactatgaa
     7081 gccttgcgtg acgctttgga aaaattacag cttaacgacg cttcgctaaa attcgagcct
     7141 gaagtttccc aagcattggg cttcggcttc cgttgcggct tcttgggtct gttgcacttg
     7201 gaaatcgtgc aggaacgctt ggagcgcgag ttcgacatgg atttgattac caccgcgccg
     7261 acggtggttt atgaagtcgt gttgaaaagc ggcgaaaaaa tcgaagtcga aaatccgtcc
     7321 aaactgcccg acatcggcag catcgaaacc atactcgagc cgattattac cgcgaccatc
     7381 ctcgtgccgc aggaatacgt cggcaacgtc atgactttgt gtaaccaaaa gcgcggcgtt
     7441 caggtcaata tgcaatatat gggccgccaa gtcatgctga cttatgattt gccgatgaac
     7501 gaagtcgtca tggacttctt cgacaaactc aaatccactt cgcgcggtta tgcttcgttg
     7561 gactaccatt tcaaagagtt ccaaccgtct gatttgatta agctggatat tatggtcaac
     7621 ggcgaaaaag tcgatgcatt aagcctgatt gtgcaccgtc aaagcgcggt tcaccgaggc
     7681 cgcgagctgg catcaaaaat gcgcgagctg attccgcgcc aaatgttcga catcgccgtc
     7741 caagccgcca tcggcagcca gattatcgcc cgcgaaaacg tcaaagccct gcgtaaaaac
     7801 gttttggcga aatgttacgg cggcgatatt acgcgtaaga aaaaactgct tgaaaaacaa
     7861 aaggcaggta aacgccgtat gaaacaagtg ggcaatgtgg aaattccgca aagcgcgttc
     7921 ttggcgattt tgcaggtgag cgacaaataa ctctggcaca cagggcggcg cgtcgggaac
     7981 acccctcaaa ccgccctgat ttcaggggca cgcgcccgca aacaaatttt gcaatttgcc
     8041 gccttaaaac ggttgcacgg acaggcgggt ttttaagcat taaggaacaa caatgaacac
     8101 aatgctaatg tcgggcgcgg ctgccgcgct gcttgccggc atcatccttt atttcaaaag
     8161 cgacaaaaag cggcaggaaa acggtgaatg gagttccggt ctggaatacg cctatatcct
     8221 gacggcggtc ggcgtgtttg ccgctttgtc cctgtttatg agctttgccg ccgttttcct
     8281 gattttcgtt gtattgtgcg gtacggcttg gggggtatat aaataccgcc tgaagactca
     8341 tcccgaaatc tcggaaagca gccacttcgg cgattatttc ggcagtttct tccctaccgt
     8401 tttggtattg ttcctcatcc gatcgtttat tgccgaaccg ttccaaattc catccagctc
     8461 gatgcgcccg ggcctgatca agggcgattt cattttggtc ggcaaatttt cctacggcct
     8521 gcgcgtaccc gttttaaaca atatatttat tcctacaggc aaaatcgaac ggggtgatgt
     8581 cgttgttttt aattatcctc tgcagccaga gatgacctac atcaagcgta ttgtcggcat
     8641 tccgggcgat gtggtcgaat atcgggataa gattttgacg gtaaatggca aacccacttc
     8701 cgatattcct aacggcacat accgttatcc cgacgatacc gacccatccg aaatccacaa
     8761 cacggatatg ttccgcagcg gtttggacgg caaatccttc aatattctga aaaaagaagg
     8821 acagcctgcc gtttccctgc ccgtattggg caaatatacc tccgatatta tgtctgaaaa
     8881 cggatattcc atagagcaaa gcggtttgga acactgccaa tatgccgacg acggcagcgg
     8941 tttcgtgtgc aaagttcccg aaggacgcta tttcgctatg ggcgacaacc gcgacaacag
     9001 tgccgattcg cgctactggg gatttgtgga tgacaagctg gttgtcggca aggcaatgtt
     9061 cattttgatg aacttcggcg atttcggcag ggccggtacg gcaatccgtt aggccggaaa
     9121 attacgccgg aacatcaaaa atgccatccg aaccctgttt cagacggcat ttttatcatc
     9181 aaacgccttg tttccctgcc ggcagcctcg gggataatat agtggattaa atttaatcca
     9241 ctatatttcc gtttgtgtgg aaacccatcc cattgaataa agggcatttc gtccgactga
     9301 cggtgtgggc ggcatatgga aatacggaca ttattttagt tgcattgcca ttccagcgga
     9361 ggcggctttt ttgattctgc ccgccccgat gccgtctgaa agggcttcag acggcatttt
     9421 ccgctccgcg ccgttgccgg cgtgtttggt cttgccggtt ttgactgcct gccagttcaa
     9481 tcgtacgcag gtttgccacg gcagaaaatc tgatgccgga cggagtcaag gctcggactg
     9541 ctgtttcagc gaaccgaggt aaattgccga aagcgtcagc gccacccctg cccactgcac
     9601 gccttcaatc ggtttgccca acccgaaata atcgatgaac agggcggcaa ccggttcgga
     9661 caaaagcagc agccccgtca gcgacagcga aagcagcgga atcgcatagg caaccatcgc
     9721 ccacgcgaag cactgcatca ccacgccgta cacaagcacc aaacccgcat ctttccaagt
     9781 cgtcggataa agcgcgccgc catccatcag caatgccgga acaaccagcg ataccgcgcc
     9841 gcccaaactc aaaatcatca ttgaagggaa aagcgccacc gtctcgattt catgggtttt
     9901 gcggacgaac accatcgaca gggcgagcat cagtcccgat accaaaccgc tgacgaatcc
     9961 ccaaaccgca ttaccgttgt agccgaattc cgcaccggca atcattgcca cgccggcaac
    10021 tgccgatatt aagcctgcct ttttcagccc gctcaaacgc tcgccgaaaa agaaaacacc
    10081 gattgccgac aaaaaaaaga tttgcaggct gttgagcagg gtggaaatac ccggcccgac
    10141 cgcgtgtatg ctttcgtgcc acaacgccaa atcgaaagag agaaacacgc ccgccgtcag
    10201 ggcatatcgg acggttttcc tgttttttgg gaatttttgc ctgaaaaacc gtgctaaaaa
    10261 ccaaaatacg aacaccgaaa tcagcaaccg ccaaaatgcg attgcatacg aaccgacggg
    10321 gacggatctg acaatcagac tgcccagacc gaacaccacg caacccagca ccagcaatgg
    10381 tgcggcatat tttttgccgt taccgaccac aatatcccct cccttcccca tacggctgcc
    10441 gcgccgacgg caagaatgcc gccattccga aaatatgccg tctgaagccc aaagccccgg
    10501 ctgcacccgg acaaacggct gattttacgg gcaggccgac tattttccgt tggggcaaaa
    10561 aaccgtcctg ctagataaaa ccc
//
LOCUS       DAXHRP010000058        10549 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.058, whole genome shotgun sequence.
ACCESSION   DAXHRP010000058 DAXHRP010000000
VERSION     DAXHRP010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10549
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.058"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(217..2625)
                     /locus_tag="ACFM72_001089"
     CDS             complement(217..2625)
                     /locus_tag="ACFM72_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HFC6257665.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEHGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPIFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPSVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSVEWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGEVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYITAHSLSAGR
                     NKRP"
     gene            2695..3699
                     /gene="amgK"
                     /locus_tag="ACFM72_001090"
     CDS             2695..3699
                     /gene="amgK"
                     /locus_tag="ACFM72_001090"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HFC6257666.1"
                     /translation="MQRQIKLKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLHRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(3756..4454)
                     /locus_tag="ACFM72_001091"
     CDS             complement(3756..4454)
                     /locus_tag="ACFM72_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC6257667.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            4481..4672
                     /locus_tag="ACFM72_001092"
     CDS             4481..4672
                     /locus_tag="ACFM72_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257668.1"
                     /translation="MLEINRNPAILLHFRVLIQFAAGKERFRFRKPLQTASNPMPSEA
                     VSVVQYAPLPQTGTTVEEQ"
     gene            4672..6210
                     /gene="murJ"
                     /locus_tag="ACFM72_001093"
     CDS             4672..6210
                     /gene="murJ"
                     /locus_tag="ACFM72_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HFC6257669.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLIIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMCGGLWAAQAYLPFEWAHAGGMRKAGQLCILIVIGGCLYFASLAALGFRPRHFK
                     RVES"
     gene            6343..7299
                     /locus_tag="ACFM72_001094"
     CDS             6343..7299
                     /locus_tag="ACFM72_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HFC6257670.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPTYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRSRGWHGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGERGENALPQAAA
                     AVSAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRRTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHAGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            7350..8132
                     /gene="trpC"
                     /locus_tag="ACFM72_001095"
     CDS             7350..8132
                     /gene="trpC"
                     /locus_tag="ACFM72_001095"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HFC6257671.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVNAEHIRALAENAPPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEREQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIEAEVGKLF"
     gene            8197..10497
                     /gene="recQ"
                     /locus_tag="ACFM72_001096"
     CDS             8197..10497
                     /gene="recQ"
                     /locus_tag="ACFM72_001096"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HFC6257672.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLMVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAHEIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADVATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEVIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNTADFSHNAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHTVLSDESLADMLADTPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKHKRRLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT         2162 a         2985 c         3015 g         2387 t
ORIGIN      
        1 ctttggcagc tttggcagct ttggcggatg cggtttttgc cttttgcggt gcggcgtgga
       61 catcggctgc tgccagcaat gcggcggcaa tcatcagggc tttgattttc atcattcttt
      121 ccttatcgtt tgaatcctgc ctttgatggc gggtttgggg ttgtcggtgg aatgccgtct
      181 tgtgcgggaa cggtgctcct gccaggtttc cgacggtcag ggtcgtttgt tgcgtccggc
      241 ggaaagagag tgggcggtga tatagccggg aacggcgaca tccatcctgt ctgcggggtt
      301 tctgccgaca ctgctgaggt ctttcaactg aagtgagaaa aagacagcgt ttttgtaggt
      361 gttttcgccg gtaacgtagc gttgggcgta cacgcccgcg ccccagcagc cgcaactgct
      421 tttgtattcc gcacccgcca gcacctctat cggttttttg gcttcaaaac cgtagttgta
      481 acggacgacg gccgacaggt tgcgcgtcag cggccattgt gcggacaggt cgagctggct
      541 gagtttgtcg taaaaatagg aaccgtcgga cttcaggtag attttttcgt tgcgcccgta
      601 tttgtagcgg gcgttcagca ctttgccctg tgcgggacgg tagcttgcac cgacggcgta
      661 gttctcggcg cgtttgtcgt tttggttgta gtggatgctg ctgtcgagga tgaagcggct
      721 gccgatgctg ccggaggcaa atgccaccca gtcggaacgg ttgcgcggtt ttttgccgac
      781 gctgccgtca agcatcaccg catcatcctt gaaatagaat ttctgaccga tgccggcgcg
      841 gaaacgctct tcccccgtcg cgccgtccaa aatacggctt tgcacggcgg cggaaaggct
      901 gtttgcggtg ttaatcctgt cgttgccgta atagaggttt tcgcgaaaga gctgcccgta
      961 gccgaagctg ctttccgacg aatcgaaatt gggcaggtcg ttttgggatt tggcaggaat
     1021 atagttgtag aacaggcgcg gctcgagggt ttgcaggact tctccgccga acatccgcgt
     1081 attccgctca aaagttgcgc cgctgtcgat gttgacaatg ggcagagtgc ggctgacgcg
     1141 tcgggcttct tggctgccga agcggttgag gctgtaatag gtggcgtgca gtccgagttt
     1201 gggacggaca tagccccagc tgttgctgaa atcccatttg atgtcgggat agacgaccag
     1261 gcggctgccg tcttggcggc tgtcgtggct gaatcgggta aattgtgcgg acacgccgat
     1321 ttgcgccctg ccggtgtttt tacgccactc gaccgaaagg cgcggcatga gggcatacgg
     1381 tttgtctttg tagccgcttt ggtttgccag cgtctggtat ttcagaaccg aaaggccggc
     1441 attcaggctg ccgcccgccg ccctgccgcc ataatccagc catacacggc ggttgaggtt
     1501 gacgttgccg gcgatttctt tgttgccgta aaagtcgcgg tagtagccgc tgtcggagac
     1561 ttggttgaaa tcgacacccg cctgaagcgt gtcggaaatg tcgtgccgat gctgccattt
     1621 cgcctgatag cggttattcc tgccgctttt cttgtcgtgc ggcagccagg tcaggtcgga
     1681 ctggccggca taatccggcc gcaggtagcg tacctgcccg tcaaagaccg cgccgcgttc
     1741 gccgatcacg ctgggcgcga acgtggcatc gagattgggg gcaaggttga aataataggg
     1801 aacggaaagg gaaacgccgt ccgaaccggc ggacagtgag ggaacaagca ggccgctttt
     1861 gcggttgccg tcaagcggga agtccgccca aggggtgtag aaaatgggaa cgccgccgaa
     1921 cacgaaggcg gcgtgtttgg caacgcctat gcctttttcc cgatcggctt cgacggaagc
     1981 ggccttgaca taccagccgg catcgccggc ggaacaggtg ttgaattggg tttccgtcag
     2041 tttgtaatgc ccttcgccca acatttcggc ggtgcggctg acgctttgca gccgccgtcc
     2101 gccgtgttcg gtttccatac ggacgttgtg cgcttccccg gtctgctgct cgagattgta
     2161 ggtcagggtt tcgccccgaa tcagcgtacc gtcctgttgg agggcgaacc ggtcgcctgc
     2221 ggtaacggtg tcgcccgact ggtcgtaatc cgcccaatcg gtattgaggg tcgtccggtt
     2281 gcgttcgacg acgacgttgc cttcggcacg cacctgcacc tgcgactgtc cttccacctt
     2341 gtcggcaaca atgcgcgtat agtcttcggg gatggatgct tcgccgctgc ctcggacggc
     2401 ggcttcggtt ctctcggggc tgccgctttc gttactgcaa aacaggcagg tcgaaccgag
     2461 gctcaggctg gtaggctgta tgggttcgga cacgctccga acgcttcctc cggcggtcgg
     2521 attgtccgtt tcctccgccg caacggcatc ggcggcggcg caatgcgtgc cgaagcagag
     2581 gcccaatgcc agcaccagtg gtttgagtga aaataaacga gccaaaatcg cccctcaagt
     2641 cggtttgcca gttagaatag cgtttattgt aacctgaaat gctttcgtac tgttatgcaa
     2701 cgacaaatca aactgaaaaa ttggcttcag accgtttatc ccgaacggga cttcgatctg
     2761 acttttgcgg cggcggatgc tgatttccgc cgctatttcc gtgcaacgtt ttcagacggc
     2821 agcagtgtcg tctgcatgga tgcaccgccc gacaagatga gtgtcgcacc ttatttgaaa
     2881 gtgcagaaac tgtttgacat ggtcaatgtg ccgcaggtat tgcacgcgga cacggatctg
     2941 gggtttgtgg tattgaacga cttgggcaat acgacgtttt tgaccgcgat gcttcaggaa
     3001 cagggcgaaa cggcgcacaa agccctgctt ttggaggcaa tcggcgagct ggtcgaattg
     3061 cagaaggcaa gccgtgaagg ggttttgccc gaatatgacc gtgaaacgat gctgcgcgaa
     3121 atcaacctgt tcccggaatg gtttgtcgca aaagaattgg ggcgcgaatt aacattcaaa
     3181 caacgccaac tttggcagca gaccgtcgat acgctgctgc cgcccctgtt ggcgcagccc
     3241 aaagtctatg tgcaccgcga ctttatcgtc cgcaacctga tgctgacgcg cggcaggccg
     3301 ggtgttttag acttccaaga cgcgctttac ggcccgattt cctacgattt ggtgtcgctg
     3361 ttgcgcgatg cctttatcga atgggaagaa gaatttgtct tggacttggt tatccgctac
     3421 tgggaaaagg cgcgggctgc cggcctgccc gtccccgaag cgtttgacga gttttaccgc
     3481 tggttcgaat ggatgggcgt gcagcggcac ttgaaggttg caggcatctt cgcacgcctg
     3541 tactaccgcg acggcaaaga caaataccgt ccggaaatcc cgcgtttctt aaactatctg
     3601 caccgcgtat cgcgccgtta tgccgaactc gccccgctct acgcgctctt ggtcgaactg
     3661 gtcggcgatg aagaactgga aacgggcttt acgttttaaa cccaatcaaa atgccgtctg
     3721 aaaaccaagt ttcagacggc atttttcaaa cgggcttact gcgcggcttt ttgttcttcg
     3781 cgtactttgt ccgccaaaag gtcgatggtg ttcataccgg actcccagtc ggcaaattca
     3841 actttatatt taccgccgac gataaccgtg ggcgtaccgt cgatttggaa ggtttcggtc
     3901 agctcctgca ttttgtcggc gcgcgcctgg ctttcggggg actcgtaggc ggcaaggact
     3961 tttttgccgt caaaggcggt ttgttcgccc agccattttt tgaggacttc cggattttgc
     4021 agcttgattt tttggttgac catcgcatcg aaaatatggc tgttcgccac atctttgctt
     4081 tcggcggcag ccatatcgac ggcggcggcg aggcgggcca gcgtcagcat ttctttctgc
     4141 cagacgacgt gttcggtacg caggtacata tcgtctttaa aagacttggc gtgtttgctt
     4201 aaaacaggtt cgaggtgggc gcagtgcgga cagaaatagc cgaaaaactc aaggacttcg
     4261 actttgcctg cctgctgttg cggaatcgga ttggcaagga cggtatagtt ttgcccttcg
     4321 accagccctg ccggggcggc ggctgccgaa gcggcaggcg cgctgtcggc ggggacgctg
     4381 gtttggactt tgctgtcgca cgcggcaagg gcgaacaggg cggcaacgcc gagggcgagg
     4441 tgtctggatt tcatacggct ctccgtgatg ttggaaatga atgttggaaa tcaatcggaa
     4501 tccggctatt ttattgcatt tccgcgtgtt gatacagttt gccgccggaa aagaacgttt
     4561 tcgtttcagg aaaccgcttc agacggcatc aaacccgatg ccgtctgaag cggtttctgt
     4621 cgtacaatac gcgccgttgc cccaaacggg tacgactgtt gaggaacaat aatgaatatg
     4681 ctgggagctt tggcaaaagt tggcagtctg acgatggtgt cgcgcgtttt gggatttgtg
     4741 cgcgatacgg tcattgcgcg cgcattcggc gcgggtatgg cgacggatgc gttttttgtc
     4801 gcattcaaac tgcccaacct gctgcgccgc gtgtttgcgg aaggggcgtt tgcccaagcg
     4861 tttgtgccga ttttggcgga atataaggaa acgcgttcga aagaggcgac ggaggctttt
     4921 atccgccatg tggcggggat gctgtcgttt gtgctgatca tcgttaccgc gctgggcata
     4981 ctcgccgcgc cttgggtgat ttatgtttcc gcgcccggct ttgccaaaga tgccgacaaa
     5041 tttcagctct ccatcgattt gctgcggatt acgttcccct atatcttatt gatttcactt
     5101 tcctcttttg tcggctcggt actcaattcc tatcataaat tcagcattcc ggcgtttacg
     5161 cccacgttcc tgaacgtgtc gtttatcgta ttcgcgctgt ttttcgtgcc gtatttcgat
     5221 cctcccgtta ccgcgctggc ttgggcggtt tttgtcggcg gcattttaca actcggcttc
     5281 caactgccct ggctggcgaa actgggtttt ttgaaactgc ccaaactgaa tttcaaagat
     5341 gcggcggtca accgcgtcat gaaacagatg gcgcctgcga ttttgggcgt gagcgtggcg
     5401 cagatttctt tggtgattaa cacgattttc gcgtcttatc tgcaatcggg cagcgtttca
     5461 tggatgtatt acgccgaccg catgatggag ctgcccggcg gcgtgctggg ggcggcactc
     5521 ggtacgattt tgctgccgac tttgtccaaa cactcggcaa accaagatac ggaacagttt
     5581 tccgccctgc tcgactgggg tttgcgcctg tgcatgctgc tgacgctgcc ggcggcggtc
     5641 ggactggcgg tgttgtcgtt cccgctggtg gcaaccttgt tcatgtaccg cgaattcacg
     5701 ctgtttgacg cgcagatgac gcaacatgcg ctgattgcct attctttcgg tttaatcggt
     5761 ttgatcatga ttaaagtgtt ggcatccggc ttttatgcgc ggcaaaacat caaaacgccc
     5821 gtcaaaatcg ccatcttcac gctcatctgc acgcagttga tgaaccttgc ctttatcggc
     5881 ccactgaaac acgtcggact ttcgcttgcc atcggtctgg gcgcgtgtat caatgccgga
     5941 ttgttgtttt acctgttgcg cagacacggt atttaccaac ctggcaaggg ttgggcagcg
     6001 ttcttagcaa aaatgctgct ctcgctcgcc gtgatgtgcg gcggactgtg ggcagcgcag
     6061 gcttacctgc cgtttgaatg ggcgcacgcc ggcggaatgc ggaaagcggg gcagctctgc
     6121 atcctgattg tcatcggagg ctgcctgtat ttcgcatctc tggcggcttt gggcttccgt
     6181 ccgcgccatt tcaaacgggt ggaaagctga ccgatgccga tatccttttt cggcaaacgc
     6241 tttttccgcg cctatattcg ggcgcgcatc ccccacgtcc gcaccagccg gacgggctgc
     6301 cgcatcatca atgccgtctg aaaacaagaa aaccgatacc ttatgatttt aacaccgccg
     6361 gacacgccct ttttcctccg caacggcaat gccgacacga ttgccgccaa attcctgcaa
     6421 cgccccgcac ccacataccg ccgcgagctg cttcccgaca gcacgggtaa aaccaaagtc
     6481 gcctacgatt tttcagacgg catttcgccc gatgcgccgc tggtcgtgct gtttcacggt
     6541 ttggaaggaa gcagccgcag ccattacgcg gtcgaactga tgctcgcggt acgcagccgc
     6601 ggttggcacg gcgcagtcgt ccatttccgc agctgcggcg gcattgccaa caccgctccg
     6661 gtgttctacc acttgggcga taccgccgaa atcgccttta ctttggacac gcttgccgcg
     6721 cgttaccgtg aaatatacgc cgtcggcgta tcgctgggcg gcaacgcgct ggcaaaatat
     6781 ttgggcgaac ggggcgaaaa cgcgctgccg caagccgctg ccgccgtatc cgcccccgtc
     6841 gatgcagagg cggcaggcag acgcttcgac agcggcatca cgcggctgct ctacacgcgc
     6901 tacttcctcc gcaccctgat acccaaagca cggtcgctcc acggttttca gacggcattt
     6961 gccgcagggt gcaaaacact gggcgagttt gacgaccgct tcaccgcacc gctgcacggc
     7021 tttgccgacc ggcacgacta ctaccgccga acttcctgca aaccgctgct caaacacgtt
     7081 gccaaaccgc tgctcctgct caatgccgcc aacgacccct tcctgccgcc cgaagcgctg
     7141 ccgacaccgg acgaagtgtc cgaagccgtt accctgttcc agccggcaca cggcggacac
     7201 gccggctttg tcggcagcac cggcggcagg ctgcacctgc aatggctgcc gcagaccgtc
     7261 ctgtcctatt tcgacagctt ccgcacaaac aggcgttaac ggtttgatgc taatattccc
     7321 cctttccccg gacgaatacg gaacacaata tgaccgacat cctcaataaa atccttaccg
     7381 ccaaggcaca ggaagttgcc gcccaaaaag ccgccgtcaa cgccgaacac atccgcgcac
     7441 ttgccgaaaa cgcaccgccc gtccgcagct ttatcggttc gatacgcggc aaacaccgcc
     7501 taaacctgcc cgccgtcatt gccgaaatca aaaaggcaag cccgagcaaa ggcctgatcc
     7561 gtccggactt ccgacctgcc gagattgccc gcgcctatga aaacgccgga gcggcgtgtt
     7621 tgtccgtact gaccgacgaa ccctatttcc aaggttcgcc cgaatacctc aaacaggcgc
     7681 gcgaagccgt atcgctgccc gtcttgcgta aagacttcat catcgacgaa tatcaggttt
     7741 atcaggcgcg cgcctggggg gcggatgccg tcctgctgat tgccgccgca ctggaacggg
     7801 aacaattgga acgctttgaa gcggtggcgc acgaattggg tatgaccgtc ctgctcgagc
     7861 tgcacgatga aagcgaattg gaaaaatgcc gcaacctgac cacgccgttg tggggcgtaa
     7921 acaaccgcaa cctgcggact tttgaagtct ccctcgacca aaccctgtcg ctgctgcccg
     7981 cgctggaagg caaaaccgtc gttaccgaaa gcggcattac aggtaaggcg gatgtggaat
     8041 ttatgcgggc gcgcggcgtg cacaccttcc tgatcggcga aacgtttatg cgtgccgacg
     8101 atattgaagc agaagtgggc aaactcttct aaatcccgat ttcagacggc atattgccgc
     8161 cgaccgatca acatccttac cgagcacgga accatcatgc accgaccgac cgccaaacag
     8221 attctgcacg aagtatttgg ttatcccgaa tttcgcggca ggcaggaggc tgtcatcaat
     8281 actttggcag gcggcgggag tttgatggtg ctgatgccga cgggcggcgg aaagtctttg
     8341 tgttaccaga ttcccgcgct gatgcgcgaa ggcgtggcgg ttgtcgtatc gccgctgatt
     8401 gcgctaatga acgaccaagt ggccagcctg catgtggccg gcatcgaagc ggcggcagtc
     8461 aacagcggca catcggcaga tgaggcgcac gagattgccg acaagcttgc ccaaggccgt
     8521 ctgaaactgc tttatgtcgc gccggaacgc ctagttaccg accgcttttt gcgttttctc
     8581 gaccaacaaa ccgtcagcct gtttgccatt gatgaggcgc attgcgtcag ccaatgggga
     8641 cacgatttcc gccccgaata ccaacagctc ggcatgcttg ccgaacgcta tccgaacgtt
     8701 ccgcgcatcg ccctgaccgc caccgccgat gtcgccacgc gcgccgacat caaacattat
     8761 ctgcacttgg acgatgcgcc cgaatttatt tccagcttcg accgcccgaa tatttattat
     8821 caggttatcg aaaaaaacaa cggcaaaaaa caactgcttg aatttatccg caaagaaatg
     8881 gcggggcaaa gcggcattgt gtattgccta agccgcaaaa aggttgaaga tgtggcgcag
     8941 tttttgcgtg aaaacggatt aaacgcgatt ccgtatcatg ctggtttgag catggacgtg
     9001 cgcgaggaaa accaacgccg ctttacgcat gaagacaata ttatcgtggt ggcgaccgtg
     9061 gcgttcggca tgggcataga caaacccgac gtgcgctttg tcgcccatct cgatatgccc
     9121 cagagtgtcg aacatttcta tcaggaatcg gggcgtgccg gccgggacgg gctgcctgcc
     9181 gcgagctggc tgtgttacgg tttgaacgat tgggtgttgc tgcgcgaacg gattgccgaa
     9241 ggcaacagcg acgaggtgca aaagcaaatc gaaatgcaaa aactcgatgc catgctttcc
     9301 gtctgcgaaa ccgccgcctg ccgccgcgta ctgctgctca aacatttcgg cgaagaatcc
     9361 gaaccctgcg gccattgcga caactgcctg catccgcccg tacggtttga cggcacggtg
     9421 ttggtgcaaa aattactcag ctgcgtgtac cgcgccggac aacgttttgc cgccggttac
     9481 attaccaacc ttttgcgcgg caaaagcgac gattggatac gcggcaaccg gcacgaacaa
     9541 ctgtccacct tcggcatcgg tacggagttg tccgacaaag aatggcgcag cgtcatccgc
     9601 cagtgtatca gcctcggcta cctcaccgtc aacattaccc gatatcaggc attgcaactg
     9661 accgaagccg ccaaaaaagt cctcaaaggc gaaaccgaag tgatgctgcg tccgctcaag
     9721 cgcgacaagc ccgccgcccg caccctcaaa gacaactggc tgcgtaccga acgcgaagaa
     9781 cgcctgtggc aggcattgcg cgtttggcgt atgaaacagg cagaagccga agtcatcccc
     9841 gcctatatga ttttcggcga caaaaccctg cgcgaccttg tcgaaaaaat gccgcaagac
     9901 ctcaacggac tgcacgacat ctacggtttg ggcgaagcca aaatcgaccg tttcggacac
     9961 ggcatcctcg aagtctgccg caacaccgcc gactttagcc acaatgccgt catccgcccg
    10021 caaaccgaac gcgaacaaca actgcgtcaa aaactcgaag cctggcggta tgaacaggca
    10081 agggcggaaa actgcgccct gcataccgtc ctctccgacg aaagccttgc cgatatgctt
    10141 gccgatacgc ccgaaaccga aaccgacctc gaaggcgtac acggcttggg cagcgtacgc
    10201 gccgccaaat acggacggga catcctcgcc gtctgccgtc cgttttcaga cggcatcgat
    10261 gaagccgcca aacacaaacg ccgcctgatg cgcgccctga ttcaatggtg caacgaaacg
    10321 gcaaaacacg aacagtccga accctaccgc attctcagca aagccgccct gcgcgccatt
    10381 gccgccaaac agccggaagg tttggcggag cttgccgccg tatacggcgt aggcgaagaa
    10441 aaagccgcac gttacggtgc ggcggtgttg gcggtgttgg aacggaatgc cgtctgaagc
    10501 ccgttaccaa gtttcagacg gcattgcctc tatttaaaaa ttcctgttt
//
LOCUS       DAXHRP010000059        10497 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.059, whole genome shotgun sequence.
ACCESSION   DAXHRP010000059 DAXHRP010000000
VERSION     DAXHRP010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.059"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(182..394)
                     /locus_tag="ACFM72_001097"
     CDS             complement(182..394)
                     /locus_tag="ACFM72_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC6257673.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAKPD
                     TETRRTDMSLEKWRQFLDWTEKTNAV"
     gene            complement(406..687)
                     /locus_tag="ACFM72_001098"
     CDS             complement(406..687)
                     /locus_tag="ACFM72_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257674.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDSEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(725..928)
                     /locus_tag="ACFM72_001099"
     CDS             complement(725..928)
                     /locus_tag="ACFM72_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257675.1"
                     /translation="MNIIEQEMKHSSLRKVDAEIAKIIADAHKINAESVKIAQESRWY
                     PMMAATGLVTAIAAVLALIFKFA"
     gene            complement(1008..1580)
                     /locus_tag="ACFM72_001100"
     CDS             complement(1008..1580)
                     /locus_tag="ACFM72_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC6257676.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVL
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            complement(1555..1899)
                     /locus_tag="ACFM72_001101"
                     /pseudo
     CDS             complement(1555..1899)
                     /locus_tag="ACFM72_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(1892..2767)
                     /locus_tag="ACFM72_001102"
     CDS             complement(1892..2767)
                     /locus_tag="ACFM72_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HFC6257677.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2812..3102)
                     /locus_tag="ACFM72_001103"
     CDS             complement(2812..3102)
                     /locus_tag="ACFM72_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC6257678.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3114..3359)
                     /locus_tag="ACFM72_001104"
     CDS             complement(3114..3359)
                     /locus_tag="ACFM72_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC6257679.1"
                     /translation="MINHECINQPYGRILKFSRVQAKEMLTADELKENFAKNGQTLAQ
                     WARENGFKPRDVYLVIGGQRKGNYGKGHEIAKKLGLK"
     gene            complement(3352..3576)
                     /locus_tag="ACFM72_001105"
     CDS             complement(3352..3576)
                     /locus_tag="ACFM72_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC6257680.1"
                     /translation="MEKPLNFKPIPYPQTRESAAGWFKRNGVCKAHWAKYFNLERTTV
                     EHLLRGKLKGNFGKSHEAAVLLGMKEKSDD"
     gene            3737..4219
                     /locus_tag="ACFM72_001106"
     CDS             3737..4219
                     /locus_tag="ACFM72_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6257681.1"
                     /translation="MSLQSVHFFVLSRDDLGCLCFDVEIIGRILPILQGIFMNNSSFF
                     GNRLKEERKKLKMTQAEIAEKCGVSGRMWGDYERGISQPKAELFFQFEKVGIDVQYVM
                     HGRRGETAVMPSETLNAEEQELLVLFREAAAADREMILMVARRAEKKAQTALGKVSNG
                     "
     gene            4212..4844
                     /locus_tag="ACFM72_001107"
     CDS             4212..4844
                     /locus_tag="ACFM72_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257682.1"
                     /translation="MDKMDQFELCQKEHVNPFALSKQYLLVVTFVKSSSKNFQAALLW
                     ARSAKLFENLEIGKETIYCCAFDKTAEQAGMAGVFLNYIENWNGKQIYINGRIHSGSI
                     YDLLGVLDCYQKSQSCPNPKSHCCFVSDDIFLWHGSRPTFEISLDLTGKKKETSSAKK
                     FVMPCINFRHHRIEKETYLGNWNEQIAALAVKQNIDWCPSFDIENFRQYE"
     gene            4837..5031
                     /locus_tag="ACFM72_001108"
     CDS             4837..5031
                     /locus_tag="ACFM72_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6257683.1"
                     /translation="MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLAL
                     AEHPDIQIIGQVVQVSKDLN"
     gene            5055..5618
                     /locus_tag="ACFM72_001109"
     CDS             5055..5618
                     /locus_tag="ACFM72_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257684.1"
                     /translation="MKILALLIAATCALSACGSQSEEQPASAQPQEQAQSELKTMPVS
                     YTDYQSAANKGLNDQKTGLTLPEHVVPIDNAEGKNLLHDFSDGLTILTVDTDKADKIT
                     AVRVVWNTDAMPQKAEKLSKAAAALIAATAPEDRTMLRDTGDQIEMAIDSHNAQKEPT
                     REWARGGIAYKVTVTNLPSVVLTAKAE"
     gene            5649..6596
                     /locus_tag="ACFM72_001110"
     CDS             5649..6596
                     /locus_tag="ACFM72_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257685.1"
                     /translation="MMIEKSISIVDGKEYSVFAVSHEFRYTFDEPILVADLISSLKAY
                     ETLTSSYLPAILNQLFDVKIQKIKVAVSEIERGSFLEKLIFNLFFKDEDAYNEFCLKI
                     RKFLGTENQDGSINMSKIIMFAMTTLLGVGAGYLLFKNPPQEKQAITNNIVTVINADS
                     SVALDGEHLVSVVKEVTGSSKQKTAENVAKVYAPASKNNGSITLGTDDVRIEPVAQQT
                     VATLPKDVDLRDTPLTEDYTDIDVQIRATDRDKNSGWYAVIDQIVPSRVRLELPEDID
                     LNRLANNATIRANVTVEFDLKQNGSRKPKKIILTSLSTD"
     gene            6681..7184
                     /locus_tag="ACFM72_001111"
     CDS             6681..7184
                     /locus_tag="ACFM72_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HFC6257686.1"
                     /translation="MSDEFNRFIERVLSHEGGYANHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAISIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGVIGAVSLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            7296..7628
                     /locus_tag="ACFM72_001112"
     CDS             7296..7628
                     /locus_tag="ACFM72_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257687.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAVVPQLAEVKKS
                     ANQEGGRQ"
     gene            7625..8035
                     /locus_tag="ACFM72_001113"
     CDS             7625..8035
                     /locus_tag="ACFM72_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HFC6257688.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            8040..8618
                     /locus_tag="ACFM72_001114"
     CDS             8040..8618
                     /locus_tag="ACFM72_001114"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HFC6257689.1"
                     /translation="MPSVELLLEIVGLPRGTFYYQLAVQSAEDKYADLKQHIHDIYRR
                     HKGRYGYRRIAAAILHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFIKSS"
     gene            8678..8860
                     /locus_tag="ACFM72_001115"
                     /pseudo
     CDS             8678..8860
                     /locus_tag="ACFM72_001115"
                     /inference="COORDINATES: protein motif:HMM:NF024729.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(9178..9540)
                     /gene="ssrA"
                     /locus_tag="ACFM72_001116"
     tmRNA           complement(9178..9540)
                     /gene="ssrA"
                     /locus_tag="ACFM72_001116"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(9603..10208)
                     /locus_tag="ACFM72_001117"
     CDS             complement(9603..10208)
                     /locus_tag="ACFM72_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HFC6257690.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QLSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT         2545 a         2453 c         2671 g         2828 t
ORIGIN      
        1 aacctgtgtt tgggtttcgg ctgtcgggag ggaaaggaat tttgcaaagg tctcagagtg
       61 agtttatttt ggggcggcgg caggtcgggg gcaagcggcg tggggcttgg ttgtggtttt
      121 taggtttggg ggtgggtaaa aaatgccgta cccggcgggc aggcttcgca ctctgaaggt
      181 ttcagacggc gtttgttttt tctgtccaat cgaggaactg ccgccatttt tccagcgaca
      241 tatcggtccg ccgcgtttcg gtatcgggtt tggcttccca gcggcctacc tgtatgtagt
      301 gcttcacccc gacgatttgc gccaactcgg cctgtgtcag tttgcagcgg ttgcgcaggg
      361 tgcgaaggtt gtaaggcgtg tagccgagtt ccatgtcgtt gcggtttatt ttgtttcgca
      421 tatttttttg actgcccggc ggcaggtttc ggtaaggacg gcggcaaatc gggcttcgtc
      481 tgccggtttt ccgtcgaaaa aaataaaatc gtaaagggtg atgccgtttt cggaatggcg
      541 gtaatgcccg cccgggcatt cgctgtctgt ctgcctgtgg attttggcaa tcaggcgggg
      601 atagcggcaa tgggtaatga aacggcttgc gccgtcttgc ccgataatcc attcggggta
      661 gcggttgaat agtgcggctc tgttcatttt gttcggggga taaagcccct cgcggggctt
      721 gtggtcaggc aaatttgaat atcagtgcca acacggcggc gatggcggta accagcccgg
      781 tggccgccat catgggatac catcgggatt cttgggctat ttttacggat tcggcgttga
      841 ttttgtgcgc gtctgcaatg attttggcga tttcggcatc tacttttctc agactggagt
      901 gtttcatttc ttgttcgatt atgttcatcg tacttccttt cgtttttggc ggttgccgcc
      961 gcttgtcgga tggtaggatg tctgccatgt gtatatattg atacctttta ggttttattg
     1021 caagtgtttt gggcggcggc ttcgtatgct tggcggtggc ggcggctgta ccattcggcg
     1081 agttcgcgcc gctcttggag gcggtagctg tcggcggtca ggtagtggtg caggcttgag
     1141 aagccggcgc gttggagggc ggcgcggctg atgtggccga gggcgaggtc tgttgtgagg
     1201 gtgtcttttc cggcggtcag gctgatgttg gtgaagaggt ggcggaatcc gtgcattgtg
     1261 tgtttggatt tgccgggggt gctgccgtca tagcccagtc gtcggatggc gttgtgggcg
     1321 aatttgatgc tgatgtggtc gggatggggg gcgggtttgc gccgtgggcg gatgccgggg
     1381 aaaaggtgga tgttgtcgcc ggtctgtgtg tgcagctctc ggagtatttc taccgcccag
     1441 tccgacagta ggacggtaaa ggggtgtttg gtcttcatgt cggcggcggg gatgtgccat
     1501 aaccgggcgg tgaggtcgat gtcttgccag cgggcggaaa gcagtgcgga cggacgggat
     1561 gacttccccg gtttccccat caatccgcgc cgcctcgatt tttccgttgg cgcgcagcat
     1621 ttccaccgcc tgccgcaccg acatcaaccg cttgccgttg cgcctcatcg cctccaccaa
     1681 aaccgccgaa atcaatttgg cttcttccgg tttaagctcc gtcttgcccg catcgctgcg
     1741 ccgtttgcgc gtcggcttga cgctgaccgc ctccagcttg cggtatagcg tggcaaggct
     1801 gatgcccaat tcctgcgcct gctgcttaag atatgcagag cgtgcgccgc gttccattgc
     1861 ttccgcctga ttctcgactg ccttaagacg ctcaatcatt gccggattca tcgccttctc
     1921 ccgtttcacc gcccaaccat tccggcacat tgtctgtcgg tgcttcagtc ggcagggcat
     1981 agctttcgcg cagttgctcg cagtccaaaa taatttgatt gagcgtgccg accatctttg
     2041 cctgatggct gatcccgtgt gcctcactgt gcgcattaag ttggtcgaac aaatctttca
     2101 gacggctcac ttgactgcgg ataccgacct caaggcttgt taactgcatc gccaactcgc
     2161 tgcctacgtc ttccgccttc ggctctctga caacggtttg cttcttagcc agcttctcgg
     2221 ccagctcatc aattttggct gttttggttt tcatcacttc gtctttggcg gcgaggtttt
     2281 cgcggctttc gcgcagggcg acgcgcagct cgcgcaccgt cattcggtcc acatcgtcaa
     2341 aggtcatgcc gttgacttct tccccttcgg ccaaacccac cagcgtaacg tcttcttcga
     2401 ccagcagctc aagcagcttc gacttgccca aatccatcag cttcggcgcg gctttctgca
     2461 tttgcggggt cgcaaagcgg cgagtggctg acatcagacg tgatgtttct gcgataccca
     2521 gcccaaattg gcttttcaca atttccataa accgtccgtg ttccgtatgc tcttttaaaa
     2581 taatcagcgc acgtcccagt tcgaacatgc cttccatcgt ctgccgtact gcttgacgac
     2641 cgcgttcaac ccaacgctct tcgctataag tctcgccgtt accccactgc tccatcacca
     2701 gcacactgcg catcgctgcc tgattgctta ctttgtcggt tgcgataatt tcaatttctg
     2761 tattcatttt ttatctccaa agtttccgac gtcggaaact ttcaaaatcc gttaatccac
     2821 atcgacccgc ttgccgattt cggcaatctt gctttgcagc cgttcatgct gctgcctgaa
     2881 ccgctctgcg atttgcaggg ttttgatgcc gtaggcgtag ttgccgtttt caagtttgat
     2941 gaccaatccc gaggcaacca aatcatcaat atccctgctg acttgcgatg gcgtcagccc
     3001 cagtccgacc gataaatcct tattgctcag accgataatc ggatgctcgt caagcgcgat
     3061 aaagaccctc aatagccgtt gtaccctttt actttctgcc atccgcatcc tccttatttc
     3121 agtcccagct tcttggcaat ttcgtgcccc ttgccgtaat tgcctttgcg ctgtccgccg
     3181 atcaccagat acacatcgcg cggcttaaag ccgttctctc ttgcccactg cgccagcgtc
     3241 tggccgtttt tggcaaaatt ttctttcaat tcgtctgccg taagcatttc tttggcctgt
     3301 acgcgggaaa atttcagtat ccgtccgtac ggttggttaa tacactcatg attaatcatc
     3361 gcttttctcc ttcatcccca gcaaaaccgc cgcttcgtgg cttttgccaa aattgccttt
     3421 cagcttgccg cgcaagaggt gctccaccgt ggtgcgctcc agattgaaat atttcgccca
     3481 atgcgccttg cacaccccgt tgcgcttaaa ccacccggcc gcgctctcgc gcgtttgcgg
     3541 atagggaata ggcttgaaat tcaaaggttt ttccatatta tttatgcctt tcgtgtgata
     3601 taatgtgttt gtttttaggt ctctttgcac gataaacatc cggtctgttg tgcagcagca
     3661 gggtcttggc ttgttttaaa gtaaacaagc tttttctcgt agctgggtgt atgtgatcca
     3721 tcatgagctg tcgcgcatga gccttcaaag tgttcatttt ttcgtccttt ctcgtgatga
     3781 tttagggtgt ttgtgtttcg atgtggaaat tataggaaga attcttccta ttttgcaagg
     3841 aatatttatg aataactctt ccttttttgg caaccgattg aaagaagaaa gaaaaaaatt
     3901 aaaaatgact caagctgaaa tcgctgaaaa atgtggggtt tcaggaagaa tgtgggggga
     3961 ttatgaacgt ggcatcagcc agccaaaagc ggaacttttc ttccaatttg aaaaggtggg
     4021 tatagacgtt caatacgtca tgcacggcag acgcggcgaa acagcggtca tgccgtctga
     4081 aaccctgaac gccgaagaac aagaactgct ggtcttgttc cgcgaggcgg cagctgccga
     4141 ccgtgaaatg attctgatgg ttgcgcgcag ggcagagaaa aaagcccaaa ctgcgcttgg
     4201 taaagtgagt aatggataaa atggatcaat tcgaattgtg ccaaaaagaa catgtcaatc
     4261 catttgcctt gtcaaagcaa tatctattgg ttgtaacatt cgtcaaatcc agcagtaaaa
     4321 attttcaggc agcattactt tgggcaagaa gtgccaaatt atttgagaat cttgagattg
     4381 gaaaagaaac catctattgc tgcgctttcg ataaaacagc agaacaggct gggatggccg
     4441 gggtattttt gaattatatt gaaaattgga atggcaaaca gatttacatc aatggccgaa
     4501 tccatagtgg cagtatttat gatttgttag gggttttaga ctgctatcaa aaatcacagt
     4561 cctgtcccaa ccctaaaagc cactgttgct ttgtttcaga cgacattttt ctatggcatg
     4621 gatcaagacc aacgtttgaa atcagtcttg atctaactgg aaagaaaaaa gaaacatcct
     4681 ctgcaaagaa atttgtgatg ccttgtatta atttccgtca ccataggatt gaaaaagaaa
     4741 cctacttagg aaattggaat gaacaaattg ccgcattggc agtaaaacaa aatatagatt
     4801 ggtgtccaag ttttgatatt gagaatttta gacagtatga ataattacta tctatatagg
     4861 aattgcagca gcgatgtgtt atgggtcaaa cgtatccaac gccaaatcga cggcagccta
     4921 ctcttgattt ctgacaattc aacctatcca cccatgccct tggcactggc ggaacacccc
     4981 gatattcaaa tcatcgggca ggtagtgcag gtatcaaaag acttgaacta gacacaatca
     5041 aaaagggaaa tagaatgaaa atactcgctt tattaattgc cgctacctgt gctttatctg
     5101 cgtgtggcag ccaatctgaa gaacaaccgg catctgcaca accccaagag caggcacaat
     5161 ccgaattaaa aaccatgccg gtaagctata ccgactatca atcagcagcc aataaagggc
     5221 tgaatgacca aaaaaccggt ctgacccttc ctgaacatgt tgtccctatc gacaatgcgg
     5281 aaggaaagaa tctgctgcat gacttttcag acggcctcac aatcttaacc gttgataccg
     5341 ataaagccga caaaattact gctgtccgag tagtctggaa tacagatgca atgcctcaaa
     5401 aagcggaaaa actgtccaaa gctgccgcag ccttgattgc ggcaaccgct ccggaagacc
     5461 gcacaatgct gcgtgatacc ggcgaccaaa tcgaaatggc gattgacagc cataatgcgc
     5521 aaaaagagcc aacccgagaa tgggcgcgtg gtgggattgc ttataaagtc actgttacca
     5581 atttaccgag cgtggttttg acggcaaaag ctgagtaaat ctattaagta gaaaaaatag
     5641 aaagggaaat gatgattgag aaaagtattt ctattgtaga tggaaaggaa tactccgttt
     5701 ttgctgtatc acacgagttt cgttatacct ttgatgagcc tattttagtc gctgacttga
     5761 ttagttctct aaaagcttat gaaacactga caagtagtta tcttccagca attttgaatc
     5821 agctgtttga tgtcaaaatc caaaaaatca aagtagctgt atctgaaatt gaaagaggat
     5881 ctttccttga aaaactgatt ttcaatttat tcttcaaaga tgaagatgct tataatgaat
     5941 tttgtcttaa aatacgaaaa tttctaggaa cagaaaatca ggacggaagt attaatatgt
     6001 ccaaaatcat tatgtttgca atgactacac ttttaggggt aggtgctggt tatctcttgt
     6061 ttaaaaaccc gccacaagag aagcaggcaa taaccaacaa catcgttacc gtcattaatg
     6121 ctgatagttc tgtcgcactg gatggtgaac atttggtttc agtggtaaaa gaagtaacag
     6181 gaagcagcaa gcaaaaaact gcagaaaatg tggcaaaagt atatgctcca gcaagtaaaa
     6241 ataatggcag tattaccctt gggacagatg atgttcggat tgaacctgtt gcacaacaaa
     6301 ctgtagcaac tttgcctaaa gatgtggact tacgtgatac gccattgact gaagattaca
     6361 ccgatattga tgtgcaaatt cgtgctactg accgtgataa aaattcaggg tggtatgcag
     6421 tcatagacca aattgttcca tcacgtgttc gattagaact gcctgaagat attgatttga
     6481 ataggctggc taacaatgct actatccgtg caaatgtaac agttgagttt gacttaaagc
     6541 aaaatggctc tcgtaagcct aaaaaaatca tcctcacatc tctctctact gattaagttt
     6601 taacccgtat taaaggctta gtcagacggc ctttcctaca atccctgtat tgatttttaa
     6661 ttcaatacag ggatttttcc atgtcagacg aattcaaccg atttatcgaa cgcgtcctct
     6721 cccacgaggg cggttacgcc aaccatccca aagaccccgg cggcgaaacc aattggggca
     6781 tcactaagcg caccgcacag gcaaacggct acaacggctc catgcgtgcc atgacgcgtg
     6841 aacaggcaat cagcatttac cgtaaagcgt tttgggagcg ttaccgcgcc gaccaaatgc
     6901 cggaagcggt cgcgttccaa ttttttgatg cctgcgtcaa ccacggttac ggcaatgccg
     6961 cccgtatgct gcaacgcgcc gcaggcgtac cggacgacgg cgttatcgga gcagtcagcc
     7021 tcaaagccat caattccctt cccgaaaacg accttttatt gcggttcaac gccgagcgtc
     7081 tggtctttta taccaagctc ggtacgttca cctctttcgg caagggctgg gtacgccgtg
     7141 tggcgcaaaa cctgattcac gcgtctgcag ataacactga ttaaagggag ataaaccatg
     7201 tcaaaaaagt cactcatcgc cctaatgacc gcagccatgc agcccgattt cagccacagc
     7261 gacctaggca ttcgctacgc catgccgact cagggatgtt ggacgcaagc ccaccgcaag
     7321 agcggggtag ccgccgcgaa acgcgcagcc aaaaaaaagc gtcgcaaata actgcctttt
     7381 tccgatggct gggcggcttg gtctctaatc cggccacagg aaaaatcagc cataccaaac
     7441 tttgggcaaa cgtcgccgca gccgccatga cttggaagtt cgtgcaggcg gcggacgcgc
     7501 ccgaatggct ttggtgggca tacggcgcga tggtcggcgg gtatgcatta atcaaacgcg
     7561 gcatcgccgt cgtaccgcag ttggcggaag tcaaaaaatc cgcaaatcag gaaggggggc
     7621 ggcaatgatt gaatttgtcc gagccaaaaa acggctgctt tgggcatttg tgcttttgct
     7681 tgtgtggacg tgcggttacc gatacgccgc cgacaaggcc gaagcggaac aaaccgccct
     7741 gattgccacc tatcggcatt cttctatggt tgcggcggaa caatatgcct tgcagcttaa
     7801 aaaagcgcag gacgaaaggc agcggtggta cgacttttcc caaaaacaag gaagaaagcc
     7861 cgtgaaaaaa cagtatccgc cgcaaacgaa aaaagccggc tatctgaaaa ccaaggaaga
     7921 actgcttgcg gaattggctt gccttacagc ggaaatggct gccctaaaaa agcccgatgc
     7981 cttaatccat gggaaagaag tgcggcagaa agaacgcaac tcgtcgcagg gttaaggcaa
     8041 tgccatccgt tgaactgctg ttggagattg tcggactgcc acgcggcacc ttttattacc
     8101 aattggccgt ccaatcggca gaagacaaat atgccgattt gaaacagcat atccatgata
     8161 tttatcgacg acataaggga agatacggct accggaggat tgcagcagcc atccttcatg
     8221 caggaacacc ggtcaatcac aagaaagtca gccgtctgat ggcgaagacg gggctgaagg
     8281 cagtgatacg gcggcgcaaa taccgctcgt tcaaaggaga agtcggcaaa attgcgccga
     8341 atatcctgcg acgctgtttc catgcagaaa agccgaatga gaaatgggta acggacgtta
     8401 ccgagttcaa tgtaggcgga gaaaagatat acctttctcc gattatggat ttgtttaacg
     8461 gggaaatcgt cagttaccgt attcaaatcc gcccgacttt cgatttggcc ggcgagatac
     8521 tgaaaggtgc gccggagaaa ccgggatcgt ctgaaaagcc gatactgcat tcggatcaag
     8581 gttggcaata tcagatgttt tttatcaaaa gcagttgaaa ggcaacggtc tggttcagag
     8641 tatgtcccgc aagggaaact gcttggacaa tgcggcaatg gaaagtttct tcggaacgtt
     8701 gaaatcggaa tgtttccata cgtgcaaata tgattccgtt accgaatcgt aagcggcact
     8761 gcacgaatat atccgttact acaacaacga tagaatcaag ttgaaattaa aaggactgag
     8821 ccctgttcag tacagaactc agtccctgaa agccgcttga ttaaactgtc cgactttttg
     8881 gggtcagttc ggcttcggca tttttttatc cgttttgggg gtaacttgtt tggaaagctg
     8941 caagcttata aataaaggat tacatttaag ttttgggtaa cctttttaaa aaaatgcgtg
     9001 atgacttttg catttttaag gcgttttttg gggtaattcg tgaaaagtta ccccaaaagt
     9061 taccccataa atggcgaaaa ctcaagcata cgccagcatc ctgcaacaca aaaaagcctt
     9121 gaaactgttg aagttcaagg cttttttgtg ttgcaggatg ctgctgaaaa tagggtatgg
     9181 tggaggcggg gggaatcgaa cccccgtccg aaagtcctct acaaagcgtt ctacatactt
     9241 agttgtgtct atttgaaaat cttatttcca tcatgccgac caacaggcct tttggaaacc
     9301 agttacctta agtcttattt cctgccaagt aacccggtag gaaaccagtc aatgtaagat
     9361 gacgttgcgg tggctttcgc cacacagccc attgaccgac tgctgcaacg gctagcctta
     9421 agcggctaaa gcgtaagttt cgtcgtttgc gactatttga attcagtgtt ttacgggaat
     9481 ctgagacccc ggtatgcccg catctgcttc gcaaccctcg tcgaaaccaa ggtcgccccc
     9541 aaaaatggtt tgcaaattat acggatattg tgcggtgctg ccaagtctgt cggagaaatt
     9601 tgtcagtctt gctgccttaa tttgcgtttg agcaggatgc ggacgcagcc gtcgttgcct
     9661 tcccggggtt cggcgtaggc gagtacgtcg gggtgttgca tcagccagtt tcgggtcata
     9721 tttttcagaa cgggtttgta gcctttggaa cctaatccgc tgccgtggat gatttcgccg
     9781 catacgccgc gtttttgggt gaatgcgatg aattcgttga ggactttttg ggcttcttcc
     9841 tgtgtgtagc cgtgcaggtc gacatcggta acgacgggat agtatccgtt tttcaggcgt
     9901 tggatgtcgt tttttccctg tccgtttttg ctgaagctgg cgggcgggtc gttgtatgtg
     9961 ctgccgatgt agaagtagtt ttcttcgtcg gcgcggttgt ctttgggacg gactttgatg
    10021 ggggttttgt cgggcggcgc ataatattgc tgccggtttt ttaatgggga gagttgtccg
    10081 actgcttgtg aaaaatcgaa atcctgttct tgtttttgct tgtttttttc ggctgcctgt
    10141 ttttctgccg cttctttttg ggcttgtttg cccagttgtt tgaggatgtt ttggaagtcg
    10201 gtattcatat tttttcctgt tatttgtccg atggctgttt cgggcggggt tttaatttgc
    10261 cggaatgttt gccaatcggg ggaggatgat tttgttgcct gcgtatgttt tttgaaagtg
    10321 tgattgtata tcaaaaagaa atgcggcaac cgtcggcagt gttgattgcc ggaaatgcgg
    10381 accggtcgaa ccgatatgcc cgaacgcctg ataaagtttt aaaaacctgc cttgcgaagc
    10441 aggctgacgt gttttgccaa tcttgaattg ccggaaacgc gaaacacgga aatctga
//
LOCUS       DAXHRP010000060        10327 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.060, whole genome shotgun sequence.
ACCESSION   DAXHRP010000060 DAXHRP010000000
VERSION     DAXHRP010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10327
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.060"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            204..965
                     /locus_tag="ACFM72_001118"
     CDS             204..965
                     /locus_tag="ACFM72_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC6257691.1"
                     /translation="MQPPKTFSSLLFSSAAQAASEDSSRSPYYVQADLAYAAERITHN
                     YPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGDWRIAADYASYRKWNNNKYS
                     VNIKKERETPHNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPYIGARVA
                     YGHVKHQVHSVETKTTIVTSKPNGGPVPSSVTKPPYHQSHSISSLGLGVIAGVGFDIT
                     PKLTLDTGYRYHNWGRLKNTRFKTHEVSLGMRYHF"
     gene            complement(939..1148)
                     /locus_tag="ACFM72_001119"
     CDS             complement(939..1148)
                     /locus_tag="ACFM72_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257692.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGLMPSEGSDGIGIGESEVVAHAQ"
     gene            complement(1166..1723)
                     /locus_tag="ACFM72_001120"
     CDS             complement(1166..1723)
                     /locus_tag="ACFM72_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC6257693.1"
                     /translation="MDALKLLTNRRSSKKLKPPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(1799..3433)
                     /locus_tag="ACFM72_001121"
     CDS             complement(1799..3433)
                     /locus_tag="ACFM72_001121"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFC6257694.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(3503..3836)
                     /locus_tag="ACFM72_001122"
                     /pseudo
     CDS             complement(3503..3836)
                     /locus_tag="ACFM72_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221902.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3836..4942)
                     /gene="serC"
                     /locus_tag="ACFM72_001123"
     CDS             complement(3836..4942)
                     /gene="serC"
                     /locus_tag="ACFM72_001123"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HFC6257695.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPCLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KTVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            5307..5738
                     /gene="rimP"
                     /locus_tag="ACFM72_001124"
     CDS             5307..5738
                     /gene="rimP"
                     /locus_tag="ACFM72_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HFC6257696.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            5766..7268
                     /gene="nusA"
                     /locus_tag="ACFM72_001125"
     CDS             5766..7268
                     /gene="nusA"
                     /locus_tag="ACFM72_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HFC6257697.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            7280..10168
                     /gene="infB"
                     /locus_tag="ACFM72_001126"
     CDS             7280..10168
                     /gene="infB"
                     /locus_tag="ACFM72_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HFC6257698.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKTGGGDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAATRAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKAAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARSL"
BASE COUNT         2788 a         2974 c         2570 g         1995 t
ORIGIN      
        1 caagacgacg aagccgcaga cagtacaaat agtacggaac cgattcactt ggtgcttcag
       61 cacattagag aatcgttctc ttttttgttc atccgctata ttgtgttgaa acatcgcccc
      121 aaacctgata tagtccgctc ctgcaacatc attgaaaatt gttcttttta atcagttaaa
      181 accgaatacg gagtcgaaaa tgaatccagc ccccaaaaac cttctcttct cttctcttct
      241 cttccgcagc gcaggcggca agtgaagaca gcagccgcag cccgtattat gtgcaggcgg
      301 atttagccta cgccgccgaa cgcattaccc acaattatcc gaaaccaacc ggtacagaca
      361 aagacaaaat aagcacggta agcgattatt tcagaaacat ccgtgcgcat tccatccacc
      421 cccgggtgtc ggtcggctac gatttcggcg actggagaat agcggcagat tatgccagtt
      481 acagaaaatg gaacaacaat aaatattccg tcaacataaa aaaggagaga gaaaccccgc
      541 acaacaggca agacctgaag acggaaaatc aggaaaacgg tacattccac gccgtttctt
      601 ctctcggctt atccgccatt tacgatttca aactcaacga taaattcgat aaattcaaac
      661 cctatatcgg tgcgcgcgtc gcctacgggc acgttaaaca tcaggttcat tcggtggaaa
      721 ccaaaaccac gattgttacc tctaaaccaa atggaggccc tgtcccaagt tcggttacca
      781 aacctcccta tcaccaaagc cacagtatca gcagcttggg tcttggtgtc atcgccggtg
      841 tcggtttcga catcacaccc aagctgacct tggacaccgg ataccgctac cacaactggg
      901 gacgcttgaa aaacacccgc ttcaaaaccc acgaagtctc attgggcatg cgctaccact
      961 tctgattccc cgataccgat gccgtctgaa ccttcagacg gcatgagacc tttgcctgcg
     1021 cacttggtgc gctggtcgcc tccgaacatg gcgcgacacc cgacatttcc gccgaacgca
     1081 tcgggcgttt catgaatccg gtttaaaacg catggaaaaa tgccgtctga aagcctttca
     1141 gacggcattg tgcttgagat tccgtttacc aatgactgac aaacgcttcc aaatcggtat
     1201 tcttgggctt atgcacttcc tctgtcggcg tgccgaccat catcagcccg atgattttat
     1261 ccttatccgc acatccgaaa gcctcacgca acagggggct gttgacccac atccccgtaa
     1321 tccagacatt gtcgaaacct tgcgccgttg ccgccagttg cagcgcatac gccgcacaac
     1381 ccgccgtcag catctgttcc cattccggtt tcggcttagg cacatcgcgg ttcggcgcaa
     1441 acgttacccc gataaccatc ggcgccatat tgcccacttt ttccgccttt ttcatcgcat
     1501 cgtcgccgaa attcaattcg gcaaccgttt gcttcaacac atcgcgaaaa cgttgcaatc
     1561 ctacctcgcc ttgaatcacg gtaaaacgga aggggcgcat attgccgtga tcgggaactt
     1621 gggttgccgc ctgaaatatt tgttccaact ccgccgcatc gggggcgggg ggcttcagct
     1681 ttttggaaga tcggcggttc gtcaataatt ttaaagcatc catatcgtta tactccggtc
     1741 atcggtcggg tgttcggaca catatgccgt ccgaaggctt cagacggcat atccggcatc
     1801 agcgcggacg gcggcaggct gccaatatat ccatttcctt ccgataggtt tggctattgg
     1861 aaatgtccat cagccccaat accgtgctga aatagtggtc gtgcgaatat tcgttttccg
     1921 ccgctttttg tttgaggcat tggaaatcta tgcccccgtg ttggcggaag gctttggaaa
     1981 accacataac catcgggata tgcgtctgcc cggaaggcgc gatggcgtaa ggcgcggcgt
     2041 gcaggtacat cccgttttcg cccaaacttt cgccgtggtc ggaaacataa tgcaccacgc
     2101 tttccaaatc gtcgcggttt tcaagtttgc ggataacctt gtcgataaac tggtccacat
     2161 acaaaaccgt attgtcgtaa gtgttgacca gcgtggcgcg ggtgcatttg ttgatttcgt
     2221 tggtgtcgca ggtcggcgtg aatttgcgtt cggcttcggt atagcgttcg taatacgtcg
     2281 gcccgtggct gccgatggta tgcaggatta aaaccgcgtc tttatcgttt ttgttgagga
     2341 cttcgtcgaa cttggtcagc aggatattgt cgaggcactc gccgttgcgg cagtattcgg
     2401 gcaggttgag cgaggtaacg tcggtattcg gcactttgcc gcacacgccc ttgcagccgg
     2461 aatcgttttc caaccaagta acttccacac cggcgcgctg cacgatgtcc agcaggttgt
     2521 cttggtgttc ggctttgatt tcgtcataat ccgtgcggtc gaaggttgag aacatacacg
     2581 gcagggagtg cgcggtcgat gtgccgcagc ttctgacctg cgggaaattg acaatttcat
     2641 cgccgcgcgc ggcaagcagc ggcgtagttt ggcggctgta accgttcaaa ccccagttgg
     2701 cggcacgcgt ggtctcgccc acgaccagca ccacgaaacg gcgcaggctg ccggccggcc
     2761 ggttttgcac gaccgccata tccaattgcg tataaggaat attggaacgc ttccaatctt
     2821 tgtatttcga cacgcccgcg ccgatgaaat tagatggcac aatcagatgg gttactgatt
     2881 tattgttgcg gaaaaacgag gcgtaatcct gatattgcaa cattgcgatg cccaacgcgc
     2941 acaaaaagga aacggcggca agcacaaggc gcgtcaaaag ctccttatac caaacgcggt
     3001 atttaacctt gacggcgata tacgccagcg cgggcaatac gcccaaacat acaatccaca
     3061 gcacatagcc cggcgtaatc aggcgcgcgc tttcggcagc cgtagtttgc aagacattat
     3121 tcaacatcga cttgttgaaa tagatattga aaaatatttc ttggtaagac accgccgcac
     3181 tgataaccaa tatcaacgga atcaatacct tatgcacgaa aggcagggca atgacgtgaa
     3241 aaacgaaatt acttaaaaaa aacagcacca ccggcatcgt atagaggaag atatccgccc
     3301 cggtgccgtt aaaaggatga agctcgacaa ctttggcaaa aaaggcgtaa ttcaatacca
     3361 gcgaggaata cagggaaagg aaggcaatca gcgcggaaga gccgagcttc ggcctcaggt
     3421 tcggttttat catttggaat gtgtcggata agggttggaa aaggcatccg gcatttggaa
     3481 tccggattat tgaaaaagat tcttaattat aaggcaacgg agcaaagcag ggcaagaaaa
     3541 cggcggctgt gcggggggtt ccgcccgcca ttcaaacgtc cggcagacat aaaaacatcg
     3601 taagcaagat tcgaaccggt ctgcaaccgc ccctgccaga aaaacgggca aagcatttca
     3661 tattggaaaa acccggccgc gccgccgacg ggacagtccg gcacaaacag catcacgccc
     3721 ggattgaaaa ggacggatag ccgccggcag cacaatctta ccacctccaa aacgccgccg
     3781 gagaacgccg aaacagccga tgccgtctga agccgcttca gacaacatcg ggacatcaac
     3841 cgtaacgccg ttggaaatcg cgcataaaat ccgccaaagc ccgcacgcct tcaagcggca
     3901 tcgcattata aatgctggca cgcataccgc cgacggtttt atagccctta agcaggcaca
     3961 agccctgcaa ttcggcttcc agcacaaaac ggcggtcaag ctcctcatcc cccgtttgga
     4021 acacgacatt cattttagaa cgcgcattcg gacggatacg gttgatatag aaaccgccgc
     4081 tgccatctat cgtctcatac aaggtttgcg ccttcagccg attgaccgct tcaatttttt
     4141 tcacaccgcc ctgcgcctgc agccagcgga acaccagccc cgacatataa atcgcgtaag
     4201 ttgacggcgt gttgtacata ccgtcgcggt tcaaatgcga acggtagttg aacacatcgg
     4261 gaatatcgtt cggacaacgc tcgagcaaat cctcacgcac aatcaccacc gtaacccctg
     4321 ccggcccgat gtttttttgc gcgcctgcgt aaatcaagcc gtaatcggca acatcaaact
     4381 cgcgcgacaa aatctcgctg gacatatcgc acaccagcgg cggcatgcct tctgaaaggc
     4441 acggcacttc acggtattgc agcccgttga ccgtttcatt gacggcaaaa tggacaaacg
     4501 ccgaatcggg tgcaacatcc cacgtttcca caggcggcag gtcgagatag tcgaactgct
     4561 cgccgccatg cgccgccaaa cggatttccg tatcggtcaa acggctcatc tgttcataag
     4621 cgatacggct ccagttgccc gttaccaccg cgtcggcagt gcggaaaccg tgtgccagat
     4681 tcatggctgc catattaaat tgggttgttg ctccgccctg cagaaacaat atcttatagt
     4741 tgtcaggcac tttcaaaagc tgcctcaaat cctgttccgc atgatgcagg atgctcaaaa
     4801 acatttccga acggtggctc attgccatca caggaaaacc cgtaccgttg tagtccaaca
     4861 tttcctgccg cgccgtttcc aacacggctt cgggcaatac ggcagggccg gcggaaaaat
     4921 tgtaaatcgg ataaagagac atgatgcagc cttgattctg aacaataacc cgcccgattt
     4981 taggcttgca gcaggctttg tgcaaggatg gaaaatacct gtcctccgcc cgattccatg
     5041 ccgcccgaac acggaaaata atatcaatat attgatttac aaacataaaa atcatgcacg
     5101 cgacaaatag atacatttgt tttgtcaaca atattcacga tttcccatta caaacctccc
     5161 ttacacccgc ttttttccgt cccaaaaaca caaaataaat caacactttc atttctccgc
     5221 aaaagcggtt ataatcacgc cgatttttca actttgacga aaaatggcca cggggccatt
     5281 tttttattat gtacataggg agcagcatgg atatccaaac catcctcgaa aaaaccctgc
     5341 ccggcctggg ctacgaactg gtcgatttcg aactgaccgc gcaaggaaca ttgcgcgtgt
     5401 tcatcgacaa agaaagcggc attaccgtcg aagactgcgc aaccgtcagc aaccacttga
     5461 gccgcgtctt catggttgaa gacatcgact acaaaaacct ggaaatttcc agccccggac
     5521 tcgaccgccc cttgaaaaaa gccgccgact tcgtgcgctt tgccggtcag aatgccaaaa
     5581 tcaaaacccg cctgccgata gacggtcaga aaaactttat cggtaaaatc gaaggctgcg
     5641 aaaacgatac cgttaccgta tccttcgacg gcaaaaccgt acaaatcgaa ttgggcaaca
     5701 tcgacaaagc ccgtctgcgc cccgaattca aattctaaaa cacaacaata ttggagatgt
     5761 tcaaaatgag tcgtgaaatg ttacagctgg cagaagcact ggcaagcgaa aaaaacgttg
     5821 atgcggaagt cgtcttccaa gcactggaat tcgccctgtc taccgccgcc aagaaaaagg
     5881 cagaccgcga acacatggac gtgcgcgtcc aaatcaaccg cgacaccggc gaataccaaa
     5941 ccttccgccg ctggctgatt gtcgccgatg aagactatac ctatcccgat gtcgaaaaaa
     6001 ccatcgagga aatccaagag gaaattcccg gcactaccat ccaaatcggc gaatactacg
     6061 aagagcagct gcccaacgaa ggcttcggcc gccaagccgc gcaaaccgcc aaacaaatca
     6121 tcctgcaacg catccgcgat gccgagcgcg agcagaatct gaacgagttt ctcgccgtca
     6181 aagaagacat cgtgtccggc acggtcaaac gcgtcgaacg ccacggcatc atcgtcgaag
     6241 tcgttgccgg caaactggac gcgctgattc cgcgcgacca aatgattccg cgcgaaaact
     6301 tccgcagcgg cgaccgcatc cgcgccctct tcctgcgcgt cgaagaaatc ggcaacaccg
     6361 gccgcaaaca agtcatcctg agccgtactt ccggcgattt cctcgtcaaa ctgtacgcca
     6421 atgaagtacc tgaaattgca gacggcatgc ttgaaatccg cgctgtcgcc cgcgacccgg
     6481 gacaacgtgc caaagtcgcc gtcaaagcca acgaccagcg catcgatccg caaggcacct
     6541 gtatcggcgt tcgcggttcg cgtgtcaatg ccgtcagcaa cgaattgtcc ggcgagcgca
     6601 tcgatgtcgt cctctggtcg cccgaacccg cgcaattcgt gatgagcgcg ctctcacccg
     6661 ccgaagtcag ccgcatcgtc atcgacgaag acaaacacgc cgtcgatgtc atcgttgccg
     6721 aagaccagct cgcgctcgcc atcgggcgcg gcggtcaaaa cgtgcgcctt gcttccgacc
     6781 tgaccggctg gcagctcaac atcatgactt ccgccgaggc agacgaacgc aatgcggcag
     6841 aagatgccgc catccgccgc ctgtttatgg atcacttgaa cgtggacgaa gaaaccgccg
     6901 acgtactggt tcaggaaggt tttgcaacct tggaagaagt cgcctatgtt cctgccgccg
     6961 aactgcttgc cattgaagga tttgacgaag aaatcgtcga tatgctccgc aaccgcgccc
     7021 gcgatgccat cctgaccatg gcgattgccg ccgaagaaaa actgggcgaa gtgtccgacg
     7081 atatgcgcaa cctcgaaggc atagatgccg atatgctccg cagccttgcc gaagcaggca
     7141 ttaccacccg cgacgacttg gcagagcttg ctgtggacga actgattgaa atcaccggtg
     7201 taaacgaaga aaccgcaaaa gccgtcatcc tgaccgcacg cgaacactgg tttaccgaag
     7261 acaaataaag ggggtacaga tgagtaacac aaccgtagaa caatttgccg ccgagctgaa
     7321 acgccccgtc gaagacctgt tgaaacagtt gaaagaagcc ggcgtcagca aaaccggcgg
     7381 cggcgattcc ctgacgctgg acgacaaaca gcttctgaac gcctacctga ccaagaaaaa
     7441 cggcagcaac ggcggcacca tcagcatccg ccgcaccaaa accgaagtca gcaccgttga
     7501 cggcgtaaaa gtcgaaacac gcaaacgcgg acgcaccgtc aacattcctt ctgccgaaga
     7561 attggcagca caggtaaaag ccgcccaaac ccaagccgca cctgtccggc cggagcagac
     7621 ggcagaagac gcggcaaaag cccgagccga agctgccaca cgtgcagaag cccgtgccaa
     7681 ggcagaagcg gaagcggcaa aactgaaagc ggcaaaagca ggcaacaaag ccaaacctgc
     7741 cgcacagaaa cccaccgaag caaaagccga aaccgcaccc gttgcggcgg aaaccaaacc
     7801 cgccgaagaa agcaaagcgg aaaaagccca agccgacaaa atgccgtcta aaaaacccgc
     7861 cgagcccaaa gaaaaagccg ccaagccgaa acacgagcga aacggcaaag gcaaagatgc
     7921 caaaaaacca gcgaaacctg ccgcacctgc cgtgccgcaa cccgtggtca gcgcggaaga
     7981 acaggcgcaa cgcgatgaag aagcacgccg tgccgccgca cttcgcgccc accaggaagc
     8041 cctgttgaaa gagaaacagg aacgccaggc acgccgcgaa gccatgaaac aacaggcaga
     8101 acaacaggca aaagccgcac aggaagccaa aaccggcaga cagcgtcccg ccaaacctgc
     8161 cgagaaaccg caggcagccg cgccggccgt cgaaaacaaa cctgtcaatc cggcaaaagc
     8221 gaaaaaagaa gaccgccgca accgcgatga cgaaggtcaa ggccgcaacg ccaaaggcaa
     8281 aggcggaaaa ggcggacgcg accgcaacaa tgcacgcaac ggcgacgacg agcgcgtacg
     8341 cggcggcaaa aaaggcaaaa aactcaaact cgagccgaac caacacgcct tccaagcacc
     8401 gaccgaaccc gtcgttcatg aagttttggt tcccgaaacc attaccgttg ccgatttggc
     8461 gcacaaaatg gcggtcaaag gcgtggaagt ggtcaaagcc ctgatgaaga tgggcatgat
     8521 ggttaccatc aaccaatcca tcgaccaaga caccgccctg attgtcgtcg aagaactcgg
     8581 acacatcggc aaacctgccg cagccgacga ccctgaagca ttcttggacg agggcgcgga
     8641 agcggtggaa gccgaagcat tgccgcgtcc gcccgtcgtt accgtcatgg gccacgtcga
     8701 ccacggcaaa acctcgctgc tggactacat ccgccgtacc aaagtggtac agggcgaagc
     8761 aggcggcatt acccaacaca tcggtgcata ccacgttgaa accccacgcg gcgtgattac
     8821 cttcttggat actccgggtc acgaagcgtt tactgccatg cgtgcgcgcg gtgcgaaagc
     8881 aaccgatatc gtgattcttg tggtcgccgc cgacgacggt gtgatgccgc aaaccatcga
     8941 agcgattgcc cacgccaaag cggcaggcgt accgatggtg gttgccgtca acaaaatcga
     9001 taaagaagcc gccaacccag agcgtatccg ccaagagctg accgcacacg aagtcgtgcc
     9061 tgacgaatgg ggcggcgatg tacagtttat cgacgtttcc gctaaaaaag gcctgaacat
     9121 cgatgcattg ctcgaggcag tcttgctcga agccgaagtt ttggaactga ccgcacctgt
     9181 cgatgcgccc gccaaaggca tcatcgtcga ggcgcgcttg gacaaaggcc gcggcgcggt
     9241 tgccacattg ctggttcaaa gcggtacgct gaaaaaaggc gacatgctgc tggccggtac
     9301 ggcattcggc aaaatccgcg cgatggtcga tgaaaacggc aaatccatta ccgaagccgg
     9361 cccgtccatc cccgtcgaaa tcctcggctt gtccgacgta ccgaatgcgg gtgaagacgc
     9421 gatggtattg gcggacgaga aaaaagcgcg cgaaatcgcc ctcttccgcc aaggcaaata
     9481 ccgcgacgtg cgccttgcca aacagcaggc ggcgaagctg gaaaatatgt tcaacaatat
     9541 gggcgaaacc caggcccaat ctttgtcggt catcatcaag gcagacgttc agggttctta
     9601 cgaggctttg gcgggcagcc tgaaaaaact gtccaccgac gaggtgaaag tgaacgtatt
     9661 acacagcggc gtgggcggca ttaccgaatc agatgtcaac cttgccatcg cttcgggcgc
     9721 gttcattatc ggctttaacg tgcgtgcaga tgcctcttcg cgcaaacttg ccgaaaatga
     9781 aaacgtggaa atccgctact acaacatcat ctacgatgcc atcgacgacg tgaaggcggc
     9841 gatgagcggt atgctttccc cggaagagaa agaacaggtt accggtacgg tcgaaatccg
     9901 tcaggtcatc tccgtttcca aagtcggcaa cattgcaggc tgtatggtta ccgacggcgt
     9961 ggtcaaacgc gattcccatg tccgcctcat ccgcaacaac gtggttatcc acacgggcga
    10021 actggcttcg ttgaaacgct ataaagacga tgtaaaagaa gtccgcatgg gcttcgagtg
    10081 cggtctgatg ctcaaaggct acaacgaaat catggaaggc gaccaactgg aatgcttcga
    10141 catcgtcgaa gttgcccgca gcctgtaatt cctttgcaaa taaaatgccg tctgaagcgt
    10201 tcagacggca acgaaacggg ttctgtatca tacagaaccc gttttttgtc gcaaatcggc
    10261 ttcagacagc cctcttgcct tatcccgatt tgaatctgac ttgccataca aacaggcttc
    10321 agacggc
//
LOCUS       DAXHRP010000061        10315 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.061, whole genome shotgun sequence.
ACCESSION   DAXHRP010000061 DAXHRP010000000
VERSION     DAXHRP010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10315
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.061"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(5..1006)
                     /locus_tag="ACFM72_001127"
     CDS             complement(5..1006)
                     /locus_tag="ACFM72_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HFC6257699.1"
                     /translation="MIDRQTNEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRERLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEAYEPPAHWEWIRKIRDTVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPLARLKQWLGMMKKEFAAAQNLFDRVRTVKDADEVRNILAEFEREMNT"
     gene            complement(1187..5020)
                     /locus_tag="ACFM72_001128"
     CDS             complement(1187..5020)
                     /locus_tag="ACFM72_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HFC6257700.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGNEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALIREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHNGVEFVELAGLDGKHPIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKTRWEWLLANLDTPLADYKARYGAA
                     VHAAPEAKNNESCFIAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDADMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLTDEDLQPFWNYKNQVDPKHTFNRHKLMKGSDLSNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKNVPAKTPRSLLGIEDGKSIPIIRNPASPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKYILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5281..5377
                     /gene="ffs"
                     /locus_tag="ACFM72_001129"
     ncRNA           5281..5377
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACFM72_001129"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5544..7235
                     /gene="dld"
                     /locus_tag="ACFM72_001130"
     CDS             5544..7235
                     /gene="dld"
                     /locus_tag="ACFM72_001130"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HFC6257701.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINDNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKVMQFVSKFLPDHLPKSMRDYRNKYEHHLILKMGG
                     KGVDEARAFLKEYFSHHGGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7367..7474
                     /locus_tag="ACFM72_001131"
                     /pseudo
     CDS             7367..7474
                     /locus_tag="ACFM72_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7530..7901
                     /locus_tag="ACFM72_001132"
     CDS             7530..7901
                     /locus_tag="ACFM72_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HFC6257702.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8056..8604
                     /locus_tag="ACFM72_001133"
     CDS             8056..8604
                     /locus_tag="ACFM72_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC6257703.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLANAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLAQTEINPELQAYA"
     gene            8740..9831
                     /locus_tag="ACFM72_001134"
     CDS             8740..9831
                     /locus_tag="ACFM72_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC6257704.1"
                     /translation="MNAQTLLTNVAELVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDK
                     YLADILQGKVLAGTGMSNTVKHLVGIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQREGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNSYLDDGYDSLKARLD
                     GAWAETERLADLAWDGAPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
BASE COUNT         2418 a         2874 c         2760 g         2263 t
ORIGIN      
        1 atattcaagt attcatttct cgctcaaatt cagccaagat gttccgaact tcgtccgcat
       61 ccttaaccgt tcggacgcgg tcgaacagat tttgtgctgc tgcaaattct ttcttcatca
      121 tacccagcca ctgtttcagc cgcgccagcg gatatttgtt gtttgcctct tttgtcaggc
      181 acagctcgaa aaactgccgt atccatttgg aaacttcggc aaaatccgtg tctttgaccg
      241 gcccgccgtt ctcgtattgc ttgatttgcc gcgccaaatc ggggcggatg accgcgccgc
      301 gaccgagcat cacgctgttg cagccgctga ttgttttgat gccgatatag tcctgcaggc
      361 tgaaaacgtc gccgttggcg gtaacgggaa tattgacggt atcgcggatt ttgcgtatcc
      421 attcccaatg cgccggcggt tcgtaagcct cggctttggt acgcgcgtgt acggtcagtc
      481 cgcatgcgcc cccttcggca atcgcacagg cgcattccaa agcccggctt ttgtcttcgt
      541 aaccgagccg catttttgcg gtgagcggaa tatgtgcggg caaacgttcg cgcagcgttt
      601 tgacgatgtg gaatatcagt tccggctctt ttaaaaggat tgcgccgcct ttgtgtttgt
      661 tgacggtggg cgcggggcag ccgaagttca aatcgatttt gttcgcaccg aagcggacgg
      721 cttccagcgc attcgccgcc atattgtccg catcgctgcc caaaagttgg acggtgcagg
      781 gcgtgccgga aaacgttttg tttccgttgg cgatttcggg gacatatttt aaccatatgg
      841 atcgggaatg cacggtatgg gtaatgcgta caaattcgct gacgcattcg tcgtagccgc
      901 caatacgcgt cagcaggtcg cgcatcacgt catcgaccag accctgcata ggggcaagga
      961 tgattcgggt tttttgtttg ggttcgtttg tttgtctgtc aatcatgatt tgggtaggta
     1021 tagtggatta aatttaaacc agtacagcgt tgcctcgcct tgccgtacta tttgtactgt
     1081 ctgcggcttc gtcgccttgt tctgattttt gttaatccac tatatttggt tcaaacaatg
     1141 ccgtctgaag gctttcggcg ttcagacggc atttccgtgt ccgttgttac agcaacactt
     1201 tctctacacc gccgttgttg gcttttttta caaactcatc cagccagttt tcgccgagga
     1261 tgtatttcgc catttcgatg acgatgtagt cggcaggcat attgttgtcg tcggcgtagc
     1321 ggctcaagcc ttgcaggcag gcggggcagg aggtcagcat tttgacgggt tcgccctgcg
     1381 gcagctcttt gaggtttttc tcgatttcct cttgtttgcg gaacttgacc tgagtggcga
     1441 tgtctggtcg tttgactgca aacataccgg attcgccgca gcagcggtcg cttaaaacga
     1501 ctttctgccc catcaggctg ctggccattt gggtggcgtt catggttttg atgggcgtgt
     1561 ggcaggggtc gtggtagagg tattgctgac ctttcacgcc gtcgagtttc acgccttttt
     1621 cgagcaggta ttcgtggatg tcgatgatgc ggcagccagg gaagatttcc tcgaagcggt
     1681 atttttcgag ctggtcataa caagtgccgc aactgacgac gacggttttg atgtcgaggt
     1741 agttgagggt gttcgccata cggtggaaag ccacgcggtt gttggtgctc atttcttcgg
     1801 cttttgcctt attgccgccc gcgtcttgcg gatagccgca acacatatag ccgggcggca
     1861 gaacggtttg tacgccgacg tgccagagca tagcttggac ggcaagcccg atttggctga
     1921 acaggcgttc cgaaccgcag ccggggaagt agaacacggc ttcggcatct tccggagaag
     1981 ccggattacg gatgatgggg atgcttttgc cgtcttcgat gcccaataag gagcgcggtg
     2041 ttttggcggg tacgtttttg ggcagggggc ggttgatgaa atggataacc tgttctttaa
     2101 tcggggcttt gccgacagtg gctttgggtt cggctttttg ctttttagtg ccgatcggaa
     2161 gaagcttgcc gattttgtag gcaaagttct gcgcggggaa gccggtctgt atcatcgcgg
     2221 cgcgcagggc tttgatggtt ttaggaccgg tcgcgtttag gaatgccata cccattgaag
     2281 ccgccggcgc aaagcgtttg tggccggaat cggcaaggta gttgcggacg gctacggtaa
     2341 cgtcgccgaa gtcgatgttg acagggcagg gtttgacgca gcggtggcac acggtgcagt
     2401 ggtcgccgat gtccatgagt tcttcaaagt gtttgacgga aacgcctcgg cgggtttgtt
     2461 cttcgtataa gaaggcttcg gtcagcaagc ccacgccgag gattttgttg cgcggactgt
     2521 acagcaggtt ggcacgcgga acgtgagtag agcagacggg tttgcatttg ccgcagcgca
     2581 ggcagtcttt gacggaatcg gcgatggtac cgaggtctga tttttccata atcaacgatt
     2641 ccgcacctaa aagctcgaag gatggcgtat aggcgttgct taagtccgag cctttcatca
     2701 gtttgtgacg gttgaaggtg tgtttcggat cgacttggtt tttgtagttc caaaacggtt
     2761 gcaaatcttc atcggtcaaa aattcgagct tggtaatgcc gatgccgtgt tcgccggaaa
     2821 tcacgccgcc gagcgaacgg gcgattttca taatgcgttc gaccgaacga taggcagtct
     2881 gaagcatgtc ggcatcgtct gaattgaccg gaatattggt gtgaacgttg ccgtcgccgg
     2941 cgtgcatgtg cagggcgacg aagacgcggc tgcgtacggt tttggcatgg attttgccta
     3001 agccttggat aattttggtg tcagttttgc cgctgaagat ttcggcaagc ggcttcatta
     3061 cgtccgcttt gacagacacg cgcaggcgga aatcgcggaa ggcaataaag cagctttcat
     3121 tgtttttggc ttcgggtgcg gcgtggacgg ctgcgccgta gcgggctttg tagtcggcaa
     3181 gcggcgtgtc gagattggcg agcagccatt cccaacgcgt tttgacggcg gaaacgtggg
     3241 ctagggcgtg tttgccgcgt tcgcccaaca gttcggcggt cggcaggtca gtgcccattt
     3301 tgtcgatggg gagtttgccc gaaagatatt gctccaaggc ggcacagagt ttgagcttgt
     3361 tttggatgga aagctcaatg ttgatgcgtt cgatgccgtc cgaatactcg ccgagccttt
     3421 cgagcgggat gaccacgtct tcgttaattt taaaggcgtt ggtgtgcttg gcgatggcgg
     3481 cggtgcggct gcggtcgagc caaaaggttt tgcgcgcttc gggagacacg gcgataaagc
     3541 cttcgccatc gcgggcgcgg gcaagttcgc aaatgtgttc ggcggctgcc tctacggcgg
     3601 cttcgtcgtc ggaaaccacg tccgccagca agaccatttt cggccgtccc ttgcccgccg
     3661 ctttggttgc gtagccgacg gcgcggacgt aacgccagtc caaatgttcc aaacctgcca
     3721 gccgaacgct gtcgtgggcg agcaggaaat cgcggatttc gacgatagaa ggcgtagcgg
     3781 tggcgaccgt gccgaaaaac tccatacaca cagtgcgcgt gtatttcggc attttgtgca
     3841 acacgaaagc aacgccggtg atgatgccgt ccgtgccttc tttctgtacg ccgggcaggc
     3901 cgctcaagaa tttgtcggta acgtctttgc ccaaaccgac tttgcgaaat ttgtggccgg
     3961 gaatttccaa acgttcggtt ttaacgatat tgaggccgtc tgaatccagc gtgtgaacgt
     4021 cgaacacggc ggtttcttcg tcgtggattt tgccgaaatt gtggcgcacg cgctcgatgc
     4081 gcagccattc gccctgcggg ttgaccatct gccagtaggc gaggttgtcc aacgccgtcc
     4141 cccacagcac ggctttttta ccgcccgcgt tcatcgccac attaccgccc acacaggacg
     4201 catcggcgga agtcggatcg acggcgaaca ccaaacctgc ctgatgcgcg gtttcttcca
     4261 cccgccgcgt taccacgccc gcgccgcaat ggataatcgg atgtttgcca tccaagcccg
     4321 ccagttcgac aaactccacg ccattatgtt tatccagctt ttccgtattg atgaccgcgc
     4381 tcatcgcgtc caaaggaatc gcgccgccgg tataacccgt accgccgccg cgcgggataa
     4441 taaccaaatc cagctcgatt aaggcgcgca ccaaaggcgc gatctctgcc tcggtatcag
     4501 gattgacgac gacaaacgga tattcgacgc gccagtcggt tgcatcggta acgtgcgtta
     4561 cccgcgccaa tccgtcaaac ataatattgt gcggcttggt gattttgctc aaacgctcca
     4621 aaatctgccg ccgcttttgg ctggtttcat caaaactgct atcaaaacgc tcgactgctt
     4681 tttctgctgc ggcaaccaag acatccactt gccgattatc gtcgcggcgt ttgcggattt
     4741 cgttcaggcg gtggcgcatt tcgcgtatca acgcggcgcg gcgtttcgga tgctccagca
     4801 aatcatcgac cagatacgga ttgcgcacga ccacccaaat atcgcccaac acttcaaaca
     4861 gcatccgcgc cgaacgtcca gttttacgct gtccgcgcaa gtcttgcaga atctgccacg
     4921 cttcgttgcc caacagtcgg atgacgattt cgcggtcggt ataagaagta tagttatagg
     4981 gaatttcccg aatacgctgc ggggcggtag tcgtggtcat ggtgtgtccg tgtttggcag
     5041 tttttatttg aatgccgtct gaaaagtcgg tttcaggcga gtttgaaaag gcgataatgt
     5101 agttcaattt ttgatatttt tcaatgccga aacaggaaat acccttatag aaacaaaata
     5161 acgctttgag aaattgttga caatattatc aaatataaat tttaggtggt gtttccggcg
     5221 tatgaccgta tcaaaacggt tgagtttttc agaaaacccg ttataatgcc gtttctctga
     5281 ggcgggtctc cccgcatggc aaatcggaac accgggtcag gggcggaagc cagcagccca
     5341 ctccgatgcg ccagtgccgg gggtttggcc cgccgcccta tttgaaacgc cggagcttcg
     5401 atgttccggc gttcccgtat cgcaccgatg ccgtctgaaa gccgttcaga cggcattttc
     5461 tttactttgc cataacgtat aactacaatg tgaaaacaat tccaatgtgc aatgcacctg
     5521 ccgacaattt taaggaaact gccatgagcg catcacaatt actgtcaaga ctgacccaaa
     5581 ccgtaggcga aaaatacatc atcaccgacc ccgcgaaaac cgaacaatac cgccagggct
     5641 accgcttcgg cgagggtaag gcgttggcgg tggtgcgccc cggaagcatt ctggaaatgt
     5701 ggaaaattct acaggcgtgc gtcgaagcgg acgtgattgt gattacgcag gcggcgaata
     5761 ccggtttgac gggcggctcg acccccgacg gcaacgatta cgaccgcgac atcgtgatag
     5821 tgaacactat gcggatgaac atcatccaaa ccatcaacga caacgaacaa gtcgtctgcc
     5881 tgcccggttc gaccctgaac cagcttgaat tgctgctgaa acctttgggg cgcgaaccgc
     5941 attcggtcat cggctcttcc tgcatcggcg cgtccgtctt gggcggcgtg tgcaacaact
     6001 ctggcggcgc gttggtacag cgcggcccgg cctacaccga aatggcgttg ttcgcccaaa
     6061 tcaacgaaga aggcaggttg gaactggtca accacttggg catagacttg ggcgatacgc
     6121 cggaagaaat cctgaccaac ctgcaaggtc atcattatca aaacaaagac atcaaacaag
     6181 acgcgggcaa aggacacgac cacgcctatt gcgaacacgt ccgccaagtg gacgaaccga
     6241 ccgccgcgcg tttcaacgcc gaccccgcgc gccattacga agcctcgggc tgcgcgggca
     6301 aactgatggt gttcgccgtc cgtttggaca ccttcccgca agaaaaacaa accgccgtgt
     6361 tctacatcgg caccaacgac atcaacgagc tgaccgacat ccgccgcgcc gccttgggcg
     6421 aatttgaaag cctgcccgtt tccggcgaat acatccaccg ccacgctttc gatattgccg
     6481 acgtgtacgg caaagacacg ttttacgtca tcaaaaaatt cggtacgcac caactgccga
     6541 aattatttga tttgaaggca cgcgtggaca ggttcggcaa aaaagccagc ttcctgccca
     6601 agcatttttc cgacaaggtc atgcagttcg tcagcaaatt cctgcccgac cacctgccca
     6661 aatccatgcg cgattaccgc aataaatacg aacaccacct gattctgaaa atgggcggga
     6721 aaggcgtgga tgaggcgcgc gcattcttaa aagaatattt ttcacaccac ggcggcgcgt
     6781 ttttcgaatg caacgccgaa gaaacccaag ccgcgatgct gcaccgtttc gccgtcgcct
     6841 ccgccgccat ccgctaccgc gccgtgcatg atgacgaagt ggaagacttg gtcgcgctcg
     6901 acatcgccct gcgccgcgac gatcgcgact ggtttgaaaa actgccgtcg gaaatcgaca
     6961 ataaaatcat ccataaactc tactatggac atttcatgtg ccacgttttc catcaggatt
     7021 acatcatcaa aaaaggcaac gactgcatgg cgttggaaca cgaaatgctg catcttttag
     7081 accaacgcgg cgcgcaatat cccgccgaac acaacgtcgg tcatttgtat gaagccaaac
     7141 ccgcgctcaa acagttttac cgcaaacttg acccgaccaa cagcttcaac ccgggcgtag
     7201 gcaaaaccag caaaaagaaa aactgggcgg aataagcgtg tccgctttga aggcaggcaa
     7261 tgccgtctga aggcaaaacg ccgttcagac ggcattgtcg ggtttgaagt tccccgtcgg
     7321 gtaatcgctt tcaaaccgta tgccgacaca cgggcgcgcc cctcccaaat atagtggatt
     7381 aaatttaaat caggacaagg caacgaagcc gcagacagta cagatagtac ggcaaggcga
     7441 ggtaacgccg tactggttta aatttaatcc actataaagt ctgatcctac cttcccaaag
     7501 ggcagggttt caaccgaaaa ggaaacacga tgaaaccata caaaatctac acccatcccg
     7561 ccctgccgcc ccaagccgtc aaacaaggct ggtcgtggcc gggccttttg ttcggcacgc
     7621 tgtgggcgtg tttcaaaaga atgtggggtt tggggctggg gctgacgggc gcgatattcg
     7681 tgctggctgt gtttgcccaa ctggtttacg gcgacacgcc cgccacagac tcggcgttta
     7741 acgtattggg cttggcggtt tccgtctggt tcggcgcaaa gggcaacagc ctttatgcac
     7801 gccacctttt atcgcgcggc tataccgaat tgcccgaaac ggttgaggca gccaatcccc
     7861 aagccgcatt ggcgcaatat ttcgggcgcg ggggccgata agcgcgtttt cttttccatc
     7921 atgccgtctg aaaaatgttc agacggcatt tcttataacc ttttgtttgc agcacataac
     7981 caatcagtct ttcctattcc gttccgaaat gcataccatg cgcccgtccc caatatttgc
     8041 gaacaaggaa agaaaatggc acgtttaacc gtacacaccc ttgaaaccgc ccccgaagcc
     8101 gccaaagcgc gcgtagaggc ggtacttcaa aacaacggct tcatccccaa ccttatcggc
     8161 gtattggcaa acgcccccga agccttggcg ttttaccaag aagtcggcaa gctcaacgcc
     8221 gccaacagcc tgactgccgg cgaagtcgaa gtcatccaga tcatcgccgc ccgcaccaac
     8281 caatgcggct tctgcgtggc agggcatacc aaactggcaa ccctgaaaaa actcctttcc
     8341 gaacaatccg tcaaagccgc gcgcgctttg gcggcaggcg aatttgacga tgccaaactc
     8401 ggcgcgctcg ccgccttcac ccaagccgtg atggcgaaaa aaggcgcggt atccgacgag
     8461 gaactcaaag cattttttga tgcaggctac aatcagcagc aggcggtcga agtcgtgatg
     8521 ggcgtagcct tggcaaccct gtgcaactac gtcaacaacc tcgcccaaac cgaaatcaac
     8581 cccgaattgc aggcatacgc ctaagcaaac aaaaccgcct gaatgcaggc ggtttttcaa
     8641 aaacaccccc tcaaacaaaa acaagccgcc caagcggcag gggaagcagc cgcgcatcag
     8701 gcgcgccccc gattccctcg caaaccttaa ggaacaaaga tgaacgccca aaccctactt
     8761 accaacgttg ccgaactcgt caaaaccaag ctcaaaccca tagtggacga catcgaccgc
     8821 aaaggatact accccgaagc atttatgcgc gaactcggcg caatcggcgg attcggcgca
     8881 gtcggtacag aagccgaagg cggcaacggc ttgggtttgg caacgcaaat cgctgttttg
     8941 cgcgaaatcg gcaaagaatg cggcgcaacc tccttcagcg cgtggtgtca ggcggcttgc
     9001 gcgtggtatc tgcaccaaac gcccaaccaa gccgtcaaag acaaatacct cgccgacatc
     9061 ctgcaaggca aagtattggc aggcactgga atgtccaata ccgtcaaaca ccttgtcggc
     9121 attgaaaaac acaaccttca agccgagcgc gtggagggcg gctacacagt caacggcgcg
     9181 ttgccgtggg tgtccaacat cggcgaagac cacatctggg cgaataccgc ccaaatcggc
     9241 ggcggctacg ttatgttcat cacaggcggg caaagggaag gcgtaagcct gcaaaactgc
     9301 cccgaatttt gcgccctcga aggcacgcgc accttcagcc tgaacttcaa agacgtattt
     9361 atccccgacg aagacatcat cgccgcgccc gaacagtttg ccgactacat ccaaagcatc
     9421 aaagcaggct tcatcttgct gcaaatcggc atcggcgcgg gcgtgattga cggcagcctc
     9481 ggcatcatcc gcctcgccaa cgtcgtcaac gccgaagtca acagctatct cgacgacggc
     9541 tacgacagcc tcaaagcaag gttggacggc gcgtgggcag aaaccgaacg gctcgccgac
     9601 ttggcgtggg acggcgcgcc cgataacctc gccaccctca agctgcgcga agccgccgcc
     9661 gtactggcac ttgccgccgc ccaatccgcc gccctgcatt ccggcgcaaa aggctacctg
     9721 atgcgcagtc ccgcccaaag gcgcgtccgc gaagcaatgt ttgtcgccat cgtaaccccc
     9781 gcgatcaaac acctgcgcaa agaaatagcg gcaatcgaag ccgcaaaata aacaggcgga
     9841 aaaaacagaa acccccaccg cgtcattccc gcgaaagcgg gaatccagcc cccaacgcaa
     9901 caggaatcca tcggaaaaaa cagaaacccc caaaccgtca ttcccgcaaa agcgggaatc
     9961 cagcccccta acgcaacagg aatccatcga aaaaaacaga aaccctcaaa ccgtcattcc
    10021 cgcaaaagcg ggaatccagc ccccaacgta acaggaatcc atcggaaaaa acagaaaccc
    10081 tcaaaccgtc attcccgcaa aagcgggaat ccagccccct aacgcaacag gaatccatcg
    10141 aaaaaaccga aacctccaaa ccgtcattcc cacggaagtg ggaatccagt aaccgaaaaa
    10201 ccacaggaat ctatcgaaaa aaaacccaac ccccaaaaaa accgggcgga tacctcacca
    10261 tcctcccaaa ccctgattta tagcggatga acaaaaatca gggcaagacg gcgaa
//
LOCUS       DAXHRP010000062        10246 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.062, whole genome shotgun sequence.
ACCESSION   DAXHRP010000062 DAXHRP010000000
VERSION     DAXHRP010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10246
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.062"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            306..1742
                     /locus_tag="ACFM72_001135"
     CDS             306..1742
                     /locus_tag="ACFM72_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HFC6257705.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRHPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFNGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1753..2739
                     /gene="patB"
                     /locus_tag="ACFM72_001136"
     CDS             1753..2739
                     /gene="patB"
                     /locus_tag="ACFM72_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HFC6257706.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTFSDGIKAFLSGETPSTAQGGGSTDMPSEAAASEAVPQTGEI
                     QEWKQDTDTAAIRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYP
                     KFFDWPKTIEETLQKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDR
                     ILEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGED
                     RHTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2736..3929
                     /locus_tag="ACFM72_001137"
     CDS             2736..3929
                     /locus_tag="ACFM72_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HFC6257707.1"
                     /translation="MNSKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     TAGRQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(3989..4165)
                     /locus_tag="ACFM72_001138"
     CDS             complement(3989..4165)
                     /locus_tag="ACFM72_001138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257708.1"
                     /translation="MPYENGRRQFIIFAFRRHIKRRLCAVCRRFACVLPMPEANAGCI
                     WQTVRGVAMPSEAI"
     gene            4216..5769
                     /locus_tag="ACFM72_001139"
     CDS             4216..5769
                     /locus_tag="ACFM72_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HFC6257709.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5859..7886)
                     /locus_tag="ACFM72_001140"
     CDS             complement(5859..7886)
                     /locus_tag="ACFM72_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HFC6257710.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLAVLVLTVPDQVQMWLD
                     RAKEVIFTEFGWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLENLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGNLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8175..10181
                     /locus_tag="ACFM72_001141"
     CDS             8175..10181
                     /locus_tag="ACFM72_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HFC6257711.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRISTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
BASE COUNT         2431 a         3220 c         2484 g         2111 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat acaacgtcgg tatcggcagc ggcgcactgt
       61 tgggacattg ggtaacgcaa tatgtcggca tttcccgtat cggcatcgcc ggtatgctga
      121 cggcggcggc aggtttgtgg gtctgcctga acctgaaccg ccatatccga acctgaccgc
      181 acgatgccgt ctgaagcccc tcccgccctt cagacggcat tttgattgaa gaaatatccg
      241 cccctgctta aaataacggg ctttgccgtg ttttaacgcc tattttctta ttccaaggat
      301 ggtttatgcc gctgctgtct gtcgagttcg cactgttctt tctcgccttc ctgccgattt
      361 actggggctt ggcgaaatac ccatccgtcc aaaacctgct gcttttggct gccggtatgg
      421 gctggctcta ccatatcggc cccgtatttg cggcaatcgt cgtcctctat tcctcctgcg
      481 tgtacctttt gggcgaactg ctccgttccg atcgcgaaaa tacgcgccgc ttttggctgg
      541 ggtgcggcat tgccgtctcg ctgaccgtct tgggcttttt caaatatttc gactttttcc
      601 gcccgctgat tgcacaatat gccggaaaag gcggcgcaat cgacatcctg atgccgctgg
      661 ggctttcgta ttacaccttc cagtcgctcg cctatctggt ttactgcttc cgcgccccgc
      721 acgccgcgcg tttcgagtgg cacgagctgc tgctgcacct gagttttttc cccaccgtta
      781 cctccggccc gattatccgc gccgccgcat tcaaaagcgc ggacggcgaa caggcgggcg
      841 cactggcgca aatccgcacc cgccatccgc gttcgcctgt ccgccccgca ctcgccgttt
      901 ccctgattct gctgggtatt gccaaaaaat ggtggctggc ggggatgctg gcggaaaact
      961 gggtgtcgcc cgtgtttgaa aaccccgccc aattcaacgg ctggggcgtg ttggcgggcg
     1021 tgtacggcta taccttccaa ctcttcctgg acttttccgg atattccgat ttggttatcg
     1081 gcatggcgat gctgctgggc ttccgactgc ccaaaaactt ctccgcaccg cttcgtgccg
     1141 cgaatatccg tgcattttgg gacaaatggc acatcagcct ttccacctgg atacgcgact
     1201 acatctacat ccccttgggc ggcagcaaaa aaggcttttt gcggacacag ctcaacctga
     1261 tggcggcaat ggtactctca ggcatctggc acggctacgg ctggaacttc ctcatttggg
     1321 gcgcgctgca cggcacggcg ctggtgctgc tcaacacggg cgatcgctat ttcggacgca
     1381 acgcgctatg ccgtctgaaa taccttgcgc cgctctcgtg gtttgttacc ttccatttcg
     1441 tctgccttag ctttgttgtc ttcaataccg caagccccga cgatgcaggc gcagttttca
     1501 atgccctctt tgccaatgcc aacggctgga atgcgccgca acaggcaaac atgctgctgc
     1561 ttgcctcgtt tgcatccgtg atgctgctct acccttacct gcaacgcgct ttcgacggcg
     1621 cggtcaaagg tttggaaaaa atcccgatgt ggctgtggtt tatccccgtt tccgccgtcc
     1681 tgctgctgat tatcgtattg gccccctcgg ggatacccgg ctttatttat gccaattttt
     1741 aagggtttgg acatgaaaaa ctttctttcc cttttcgcct ccatactgat gtctgccctg
     1801 attgccgtgt ggttcagcca aaaccccatc aacgcctact ggcagcagac ctaccaccgc
     1861 aacagtccgc tcgaaccgct tgccgcctac ggatggtggc ggagcggtgc ggcgttgcaa
     1921 gaaaacgcct acaccttttc agacggcatc aaagccttcc tgtccggcga aacgccgtcg
     1981 acggctcaag gcggcggttc gacagatatg ccgtctgaag ccgccgcatc cgaagccgtc
     2041 cctcaaaccg gcgaaatcca agaatggaaa caggacaccg acaccgccgc catccgcagc
     2101 ggcgacaaag tctttttcgc cggcgactcg ctgatgcagg gcgttgcccc cttcgtgcaa
     2161 aaaagcctga aacaacaata cggcatcgaa tccgtcaacc tcagcaaaca aagcacgggg
     2221 ctttcctatc ctaaattctt cgactggccg aaaacaattg aagaaaccct gcaaaaacat
     2281 cccgaaatca gcgtgctcgc cgtcttcctc ggcccgaacg acccgtggga tttccccgtc
     2341 ggcaaacgct acctcaaatt cgcttccgac gaatgggcgc aagaatacct gaaacgcgtc
     2401 gaccgcatcc ttgaagccgc acacacgcac cgcgtccaag tcgtttggct cggcatcccc
     2461 tacatgaaaa aagccaagct cgacgggcag atgcgctacc tcgacaaact gctttcggaa
     2521 cacttggaag gcaaaatcat cctgattccc accgcgcaca ccctgagcgg cggggaagac
     2581 cgccacaccg actccgtcaa cgtcaacggc aaacccgtcc gctaccgcag caaggacggc
     2641 atacacttta ccgccgaagg acaaaaactg ctggcggcaa aaataatgga aaaaatcgtt
     2701 tttgaaccaa gtacgcaacc atcaagtaca cagccatgaa ttccaaacac ctcatcgcat
     2761 tttccgccct gttcgccgcc acgcaggcag aagccctgcc cgtcgcctcc gtcagcctcg
     2821 acaccgttac cgtttccccg tccgccccct acaccgatac aaacgggctc ttgaccgact
     2881 acggcaacgc cgccgcctcg ccttggatga aaaaactccg atccgtcgca caaggcagcg
     2941 gcgagacctt ccgcatcctg caaatcggcg actcgcatac cgccggcgac ttctttaccg
     3001 acagcctgcg caaacgcctg caaaaaactt ggggcgacgg cggcataggc tgggtttacc
     3061 ccgccaacgt caaagggcag cgcatggcgg ccgtccggca caacggtaac tggcaaagcc
     3121 tcaccagcag gaacaatagc ggagacttcc cgctcggcgg catcctcgcc cacaccggca
     3181 gcggcggcag catgaccctg accgcatcgg acggcacggc aggcaggcag cgcgtttccc
     3241 tgtttgccaa acccctgctc gccgaacaaa ccctgaccgt caacggcaac accgtctccg
     3301 ccaacggcgg cggctggcag gtactggata cccgcgcggc actgcccttg accatacaga
     3361 ccgaaatgcc gtgggacatc ggcttcatca acatcgaaaa tcccgccggc ggcattaccg
     3421 tttccgccat gggcatcaac ggcgcacaat tgacccattg gtcgaaatgg cgtgccgacc
     3481 gtatgaacga ccttgcccaa accggcgccg atttggttat cctttcctac ggcaccaacg
     3541 aagccttcgg cgacaacatc gacattgccg acaccgaaca aaaatggctg gataccgtcc
     3601 gccaaatccg cgacagcctg cctgccgccg gcatcctcat catcggcgca cccgaatccc
     3661 tgaaaaacac gctcggcgta tgcggcacac gccccgtccg cctgaccgaa gtccaacaga
     3721 tgcagcggcg cgtcgcccga caggggcaga cgatgttctg gtcttggcaa aacgccatgg
     3781 gcggcatatg cagcatgaaa aactggctca accaaggatg ggccgccaaa gacggcgtac
     3841 acttctccgc caaaggctac cggcgcgcgg cggaaatgct cgccgacagc ctcgaagaac
     3901 tcgtccgcgc cgccgcaatc aggcaataat cggacagggg gcggacggta tttccgcaac
     3961 agggggatgc cgtctgaaac gcataccttc atattgcttc agacggcata gccaccccgc
     4021 gcacggtttg ccagatgcaa ccggcattcg cctcaggcat cggaaggacg caggcgaacc
     4081 tccggcatac ggcgcaaagg cggcgtttga tatgccgtct gaaggcaaag atgataaact
     4141 gccgccttcc gttttcatac ggcatattgt tttcaaatga gggcgttcgc cgtccgcaac
     4201 cataaaggaa gtttcatgaa ccggacttat gccaatttct acgaaatgct cgccgccgcc
     4261 tgccgcaaaa acggcaacgg cacggcagtg ttcgacggca aggaaaaaac cgcctaccgc
     4321 gcgctcaagc aggaggccga agccgtcgcg gcgtatctgc aaaatatcgg cgtgaagttc
     4381 ggcgacacgg tcgcgctggc ggtttccaat tccacagaat ttattaccgc ctatttcgcc
     4441 gtctccgcca tcggcgcggt cgccgtaccg atgaacacat ttttgaaaaa cagcgaatac
     4501 gcgtatatcc tgaacgactg caaggcgcgc ttcctgttcg cctcggcggg cctgtcaaaa
     4561 gagttggcgg gcttgaaggc gcaaacgccc gtcgaaaaaa tcatttggac ggacaaaagc
     4621 cgtccggccg gcgaaatggc ggaaggcgat gccttttttg aagacgtgcg ccgcttcccc
     4681 gaaaaacccg acttgggccg ccaaccccgg ataaatgatt tggcacacat catctacacc
     4741 tccggcacga cggggcatcc caaaggcgcg ctaatcagtt acgccaacct gttcgccaac
     4801 ctgaacggca tcgaacgcat ctttaaaatc tccaagcgcg accgctttat cgttttcctg
     4861 ccgatgttcc acagcttcac gctgacggct atggtgctgc tgccgattta tatggcgtgt
     4921 tcgattattt tggtcaaatc cgttttcccg ttttccaacg ttttgaaaca ggccctgctc
     4981 aaacgcgcga ccgtgttttt gggcataccc gcgatttaca ccgcaatgag caaggcgaaa
     5041 atcccttggt atttcagatg gttcaaccgc attcgcctgt ttatcagcgg cggtgcgcct
     5101 ttggcggaac aaaccatcct cgatttcaaa gccaagttcc cccgcgccaa attgctggaa
     5161 ggctacggac tgagcgaagc ctctcccgtc gtcgccgtca atacgcccga gaggcaaaaa
     5221 gcccgcagcg tcggcatccc cctgcccggt ttggaagcca aagccgtcga tgaagaattg
     5281 gtcgaagtgc cgcgcggcga agtgggcgaa ctgatcgtca ggggcggttc ggtgatgcgg
     5341 ggctacctca atatgcctgc cgccaccgat gaaaccatcg tcaacggctg gttgaaaacg
     5401 ggcgatttcg ttaccataga cgaagacggc tttatcttta tcgtcgaccg caaaaaagat
     5461 ttgattattt ccaaaggtca aaacgtctat ccgcgcgaaa tcgaagaaga aatctacaaa
     5521 ctcgatgccg tcgaagccgc cgccgtcatc ggcgtgaaag accgttatgc cgacgaggaa
     5581 atcgtcgcct tcgtccaatt gaaggaaggt atggatttgg gcgagaacga aatccgccgc
     5641 cacctgcgta ccgtgctggc aaatttcaaa atccccaaac aaatccactt taaagacggg
     5701 ctgccgcgca acgctacggg caaggtattg aaacgggtgt tgaaggagca gtttgacgga
     5761 aacaaatgaa cgccgtgccg tccgaagccc cgtccggcaa aaaaaatgcg gtgaatctgc
     5821 ttcaccgcat tttttggcaa acgccggagc gaggatattt actctgccaa ttccacctgc
     5881 tcgtgcgcca tcagttcctg accgacatca tccaacaaca tcaaataacg ttcgtagttt
     5941 ttcaaaatgt cggcaatcag ctcgtccttg ttcatatact gcacatcgta cccgacgcgc
     6001 ccgtcgaaaa aataagcgta gggtttgtaa gttgtctgat gccggatatg cggcaggttg
     6061 ccgtcgttaa tcaactggtc ggatacatcc tgcccgacag acttaatccc gtacataaaa
     6121 tcgcgcatcg tctctttccg aatgacgaac tcgattgcgg gctcgtcctg atgaaacatc
     6181 ttatcgaccc ggacgctcaa gccgtattct tccgaaagct cccgttgcaa ctcgtgcata
     6241 gcgggcgatg cggtatgttt gaggaatttt aaaatatcct gctcctgcgt ctggctcatt
     6301 atctgcacca gccgttcttt ccacttgccg cccgtccaaa atacactggt agggttaacc
     6361 cgggtctcaa aatatttctt atccgcactc aatcctttcc acaggctgaa acacattatc
     6421 agcatcagca gggcaaacgg cagggaaaca atcagggtca tagactgcag gttgcctagc
     6481 ccgcccgagc gcatcagcaa aacggcaacg gcagacatca gcacgcccca cataaccgcc
     6541 tgccaccgtg gtgcgctcaa gcccttgtcc cgagaggtaa tattgttcag gacataaatc
     6601 ccggaatcgg cagaagttac aaaaaacagg gaaatgacca gcaggctgac gatgctcgtc
     6661 aattcgggca gggggaggta attaaagaat ttaaaaagca gcgtttccgg agaggaggtc
     6721 atcttttcga gcattccccc cgcaaccccg tcattcagcc aaatcgccgt attgccgaag
     6781 acggtaaacc acaaaacgcc gaacaggccg gggatgagca aaaccccgaa gacaaactcg
     6841 cggatggtgc gcccctttga aatacgcgcg ataaacaaac ccacaaacgg cgcccaagaa
     6901 caccaccacg cccaataaag caccgtccaa gattcaaacc acggcttgtg ttcccgttcg
     6961 tacgcataag ttttaaaact gaggcgcacc agattttcga ggtagttccc tatgttgtcg
     7021 ccgaatgccg acaacaggta aacagtgggg cccgccgcca aaacaaaaaa cagcagcaaa
     7081 aacgcaaggc tcaggttcaa ctcgctcaac accttcacgc ccttccccac gccggatatt
     7141 gccgaaacga cggcgaggga catgacggcg gcgataatca aaacctgcac gctgaagctg
     7201 ttttcggcaa tccagcccat ttcctgcaat ccggcgccca gttgcgaagc cccgaacccc
     7261 aatgtggtga tgatgccgaa aaaagtagca agcaacgcca taatatcaat ggcatcgccg
     7321 aaccttccgg aaattttttc tttcaacagg gggtaaaaac aagaacgcag ggcaagcggc
     7381 agcttgtagc ggaaaccgaa ataagccaaa gccaatgcaa tcgtaccgta caccgaccaa
     7441 gcgtgaacgc cccaatggaa caccgtgtgc agcaatgcct gctgctgcct gtgttccggc
     7501 gtgccggccg taatgtccga aaaataatgc atcaacggct ctgccacgcc gaaaaacatc
     7561 agacccacgc ccatcccggc cgcaaacagc atcgccagcc acgacaggaa gccgaattcc
     7621 ggcacatctt catcccgtcc gagcctgatg tttcccaaac tgctgaccga gagtatcagc
     7681 aggaaaccca gaaaaatgga aaacgttaaa acataaaacc agccgaactc ggtaaaaatg
     7741 acttcttttg cccgatcgag ccacatctgc acctgatccg gcacggttaa aaccaatacc
     7801 gccaaaacac acacaaaaaa caaagtcgtc aaaataacca tcggattaaa tgacgttcgg
     7861 cgttctataa attcagacag ggacaaacct tctcactcct ttgttaaaaa cagacaaacc
     7921 cggtcatcgg gcaaagcggt caaaacctgc cggcaaaata ccggcttccg gatgacgaaa
     7981 tgcacaaacc ggccgaaatt gttataatcg aaaaaattaa aaatcaatac ggattattct
     8041 atcagattga tttatcgata tttattatat cattaatata gtttgatttc aaaccggcgg
     8101 aaaatgcgcc gcccaccgca ggcgcgccct ccccgccatc ggggcgttta acgccagatt
     8161 gccgatgcgg tacaatggct gatatgaaga aaattacccc tcaaaacctg cgccccctgc
     8221 tttcggaaag cttgggacat accgattttg tcaacgtcct caacgcactg attaaatttt
     8281 tgcgccgtgg cggcaaaaaa tgtgcggggg aacgtttcga cctgattatc gacacattca
     8341 aacaagacag ggaattgctg tcccgcttca gccggtgttt ttacatctgg ctcgcgcaaa
     8401 tacacattta tccggcactc atcaaactcg gcatcttctc gcgccacagc tttgcccggg
     8461 aaatgggcat acgcatctac gaacgcttca gcccgtcata taaagatttt gccaacttgg
     8521 gcgaagtctt cctttatctt ttccattccg aaaacgacga caaatggctg caaacgctca
     8581 atatccgcca atggctggtt ttatacgaac tcatccggag ccacgccgag ccgtccaaat
     8641 tgcagacggc gggcatccgc cttgccgatg cgcgtttgcg cgccatcgaa atgctgtctg
     8701 tctggacggc atccgaagcc atcgaacccg acctcatccg catcgccccg cgcctgctgg
     8761 aagccgattc ttccttcgtc gccctccaac gcgaaaccgc caaactggtc gaacactacc
     8821 gcaacggcac cacgccttac gacaccgccc acctcgaagt gatgttcgac caatgtttca
     8881 gccagattga ctatttgcgc cgcaaaggga cgggcgccgg ctccggttcg tcggtcaaag
     8941 tcgcccacct gctcgaacgg ctccggcaga ccgtagaccg tctgaagctg ctcaccgaca
     9001 tccaaaccgg cgccggcaac agcaaccgcc tgaccatcgc gctgatgaac tccctcatct
     9061 acgcggcggt cgaacaatac agcacccgcc acctgcgccg cagcagcatc cgtatgctcg
     9121 cccgcagcat taccgaaaac aaaagccacc acggcgaaca ctacattacc cgcaaccgca
     9181 aagaatattt caaaatgttc tactcggcgg caggcggcgg catcatcatc gccctgatgg
     9241 cgctgctcaa aatccgcatc agcacactcg gcctcagccc cttcctgact tccttgtcgg
     9301 ctgggttcaa ctacggcatc ggctttatga tcatccatat gctgcactgc accgtcgcca
     9361 ccaaacagcc cgcgatgact gccgccagct ttgccgaaca ggtcgatctc aacgaaggcg
     9421 gcaaagcggt ggacaacaaa ctcgccaagc tcctcatcga cgtatgccgt tcccaaagtg
     9481 tcgccgtttt cggcaacgtt tccatcgcca tccttttggc gtgcgccata tcgttcggct
     9541 atgcccatct gtaccggcag cccatactcg atgcccacac cgccgcctac cagttcaaat
     9601 ccatagacat catcgcttac ccgacgctgt ggtatgccgc cattgcaggt ctgtggctgt
     9661 tctgctccgg catcatcgca ggttttttcg acaaccgcgc cgactacctc aacctgcgcc
     9721 aacgcctgcc cttcaacccc ttgctgcgta aaatcatgcg ccccgggccc cgccgcgtcc
     9781 tcgccgccta catccacaaa cactacggct cgttggcagg caacttcatc ttcgggatgc
     9841 tcttgggtat gaccggctat ttcggacacc tcctcgggct gccgctggac atccgccacg
     9901 tcgccttttc ctccgccaac ctcggctatg ccgccgtcag cggcaacgtc ggtttgggca
     9961 cgttcgtact cggcattttc agcgtcctcg ccatcggcct ggtcaacctc tgcgtcagct
    10021 tcagcctcgc cctcttcgtc gccctgcgct cgcgcggcac gaaaatcggc agcatccgca
    10081 atctgattaa gagtttttgg aatcagatta aaagcaatcc ctgcatactt ttcctcccgc
    10141 ccgccaaaga acagggacat cctccttcgg acaagccttg accggcaatg ccgtctgaag
    10201 cgggattcgc cccgaatacc gccctgatgc gggaaatccc cataaa
//
LOCUS       DAXHRP010000063        10195 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.063, whole genome shotgun sequence.
ACCESSION   DAXHRP010000063 DAXHRP010000000
VERSION     DAXHRP010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10195
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.063"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(48..122)
                     /locus_tag="ACFM72_001142"
     tRNA            complement(48..122)
                     /locus_tag="ACFM72_001142"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Glu,seq:ttc)
     gene            complement(140..216)
                     /locus_tag="ACFM72_001143"
     tRNA            complement(140..216)
                     /locus_tag="ACFM72_001143"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(180..182),aa:Arg,seq:acg)
     gene            complement(326..1999)
                     /gene="recN"
                     /locus_tag="ACFM72_001144"
     CDS             complement(326..1999)
                     /gene="recN"
                     /locus_tag="ACFM72_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HFC6257712.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPTLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRSLGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDKIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            complement(2183..2785)
                     /locus_tag="ACFM72_001145"
     CDS             complement(2183..2785)
                     /locus_tag="ACFM72_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HFC6257713.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            complement(2886..3827)
                     /gene="ylqF"
                     /locus_tag="ACFM72_001146"
     CDS             complement(2886..3827)
                     /gene="ylqF"
                     /locus_tag="ACFM72_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HFC6257714.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKIWLEHYNSRPDTCAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            complement(3908..4762)
                     /gene="rapZ"
                     /locus_tag="ACFM72_001147"
     CDS             complement(3908..4762)
                     /gene="rapZ"
                     /locus_tag="ACFM72_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HFC6257715.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            complement(4743..5705)
                     /gene="hprK"
                     /locus_tag="ACFM72_001148"
     CDS             complement(4743..5705)
                     /gene="hprK"
                     /locus_tag="ACFM72_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HFC6257716.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQHNEDRPD"
     gene            complement(5707..6156)
                     /gene="ptsN"
                     /locus_tag="ACFM72_001149"
     CDS             complement(5707..6156)
                     /gene="ptsN"
                     /locus_tag="ACFM72_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HFC6257717.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLFHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            complement(6341..7231)
                     /gene="ubiA"
                     /locus_tag="ACFM72_001150"
     CDS             complement(6341..7231)
                     /gene="ubiA"
                     /locus_tag="ACFM72_001150"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HFC6257718.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGALLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGVVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            complement(7261..7737)
                     /locus_tag="ACFM72_001151"
     CDS             complement(7261..7737)
                     /locus_tag="ACFM72_001151"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HFC6257719.1"
                     /translation="MEHLFGKWLPDLPAAVSDGIDLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVEARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            complement(7752..8399)
                     /gene="bioD"
                     /locus_tag="ACFM72_001152"
     CDS             complement(7752..8399)
                     /gene="bioD"
                     /locus_tag="ACFM72_001152"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HFC6257720.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKRRLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEIVLVEGAGGLMVPLTEKLLTIDYIQQQAYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLVFNHIHDSRDAHIAQYSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            complement(8396..9697)
                     /gene="bioA"
                     /locus_tag="ACFM72_001153"
     CDS             complement(8396..9697)
                     /gene="bioA"
                     /locus_tag="ACFM72_001153"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HFC6257721.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLRAKQNMATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNLTSRFDDEWDEADLQPVRALFEAHHTDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            complement(9911..10150)
                     /locus_tag="ACFM72_001154"
     CDS             complement(9911..10150)
                     /locus_tag="ACFM72_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257722.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEELCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
BASE COUNT         2360 a         2783 c         2579 g         2473 t
ORIGIN      
        1 aatgagaaat gagaaatgcc tccgatataa tcggaggcat tttgaattgg cacgcccacg
       61 gggaatcgaa ccccggttac cgccgtgaaa gggcgatgtc ctaaccgcta gacgatgggc
      121 gcatattgta ttttcttact ggcgcacccg gagcgattcg aacgcccgac cctctggttc
      181 gtagccagat actctatcca actgagctac gggtgcagca caatcacttg ttcaagtgat
      241 taagaaagcg tgataatacg gatttatctg agttctgtct attgttttag acttttattt
      301 ttagttattt tttaactgat tgattttaaa ataaactatt tttcgacgca agttgcagca
      361 attctgccgc atgttgccgc gtcgtatcgg taatgacttc tccgcccaac atacgggcaa
      421 cctcttcgac ccgttggatt ttatccaata tactgatttc gctgacggtt tgctctccct
      481 cgctgtgctt gcgcacccgc cagtggtttt cgccgcagga tgcgacttgc ggaagatggg
      541 taacggcaag cacctgatgt tttctgccca acgaacgtaa tgccttgccg accatttcag
      601 ccactccccc tccaataccg gtatcgacct catcaaaaat cagggtggga acttgggtat
      661 attggctggc aacaacctgt aaggcaaggc tgatacgcgc caattcgccg ccggaggcaa
      721 ctttattcag cggacggggc ggattgcctt tgttggcggc aacttgaaat tgaacctgct
      781 ccaaaccgtg tgccgtcggc gacgagggca acaggacgat gtcgaaacgt gcacctttca
      841 tggcaaggtg ttgcatatgc tcggtcgttt cgccgctcaa acgctctgcc gcctgatggc
      901 gcatggcaga aaggatgtgg gcagcttcct gatattcggc aaaattgtgg gcaacattat
      961 gctcgagcgc gtccaaatcg gcggcagctt gcaggctttg caggcgttct tcgatttctg
     1021 ccaacttggc aggcaactct tcaggctcga tccggtattt ccgcgccatc cccatcagtt
     1081 cgcccatacg ctgttcctgt gccgccaatt cattggggtt gatgtcgctg cgtcctgcca
     1141 catcgcgcat attggcactg atttcgccca attcggcttc gatgcttgcc aacatattca
     1201 ggctctcggc aaagcgcggc tcgatgtttt gcagattggc caatagtttt tgacattgat
     1261 agatatggcg ttggatgccg ttgtcgccgt caatcttgct tccgacttct tcggcagcct
     1321 gcaacagctc ggcagaatgg gcaaggctgt cgtggctttg gctgagagct tcccattcgc
     1381 cttgtttaat gtccaactga ttcaattcgt taaactgcca ttccagacgc tcttgttcga
     1441 gtgcaatgtt ttctgcctgt tcctgcgctt cctgcaatgc tttttttgag tttgcccagt
     1501 tttgataaag ctgcctgacg gtttccgcct gcgccctgct gcccgcaaat gcgtccaaca
     1561 attcgcgctg ggcggcttcc tgattaagcg aatgatgggc gttttgcccg tggatgtcga
     1621 taagctggct gccgacggat ttgagttgcg ccaaggtagc ggcctgattg ttgataaagc
     1681 tgcggctttt gcctttggca tcgataatgc ggcggatact gagttcttct tctccgtcgt
     1741 ttaaaagccc ctgttcatac aattctgctt ttaaagtagg caaatgggaa atatcgaaca
     1801 atgccgacaa ctgcgcttct tttgcgccgc tgcggacttg gctgtaatcg gctttatcgc
     1861 ccaacagcag accaatcgca tccaaagtaa tggacttgcc cgcgccagtt tctccggtca
     1921 atacggtaaa gccgctttga aaatccagat tcagattttc aacaatgaca aaatcacgca
     1981 aagaaagtgt tagaagcatc gtgaggattc cttagcaatt ctaccgacaa aagcaatatc
     2041 aactttagat atacgaatta taactaagat tttttaaatt aaaaataagt ttttccttaa
     2101 tttttcttaa tgcttgtttt tatctgctta tttgttgcaa tgccgtctga agcaatgtgc
     2161 gtttcagacg gcatttggaa tttcagttgg gcagggtatc ggacggtacg gcttccggct
     2221 cttcttcatc cgtaggcggc atttccatta aatcgggcaa aaccagttcg cccagttcgg
     2281 tcagcggagg aagttcttcc aaaccgtcca agcgcaaatc gctgaggaac gttgccgttg
     2341 ttgcccacaa tgcgggtttt cccaatgtgt cccgatgtcc gatgacttca atccaccccc
     2401 gatcctgcaa ggtctgcatc acgttctgcg acaccgccac gccgcgtatg ccctcgatgt
     2461 cgccgcgcgt tacgggctgc tggtaggcga taatcgccag tgtttccatc acggcgcggg
     2521 agtaacgcgg cgcacgctgt tcttgcaggc tgcccagccg ctcgaatgcc gtctgaacaa
     2581 tctgaaaacg ccagccctct tgcgtatgca ccagttgcaa cgccctatcc tgccaacgcg
     2641 ttttcaactg cgccaacaca tcaatcagtt tgtcctgcga cagtggcggc acacacaatt
     2701 cgcgcataga tttttcggtc agcggttcgg tttgggtcag cagtgcggct tcaattagtg
     2761 cgtcgggaga aattttgtcg gtcatacggg tatccgtgct gaaacggcat gggtttggat
     2821 atgccgtctg aaatcggttg gagtagagag aagctgcctg aaaaatattt ttcagacggc
     2881 attctttatg cttccgaagg cttctgccct ttacgctctg cttttctggc ttcgcgtatg
     2941 gctttgagtt cggcttcttt ctgacgggct tttttgagcc aagtttccca ttggttcggc
     3001 gtttcgaggg tgattctgcc gattttgcct tcacggaagt cggtgaggat gttttcggcg
     3061 gctttttggt agttgatccg tccgccgctg aggactgcgc cgcgtttttt ggctatccat
     3121 tcgagccaaa cgttttcgtc ccagtggctg ctggggtctt tgtcggcttg gtagcgttct
     3181 tgcagcatag ggaggtagtg gcggcggagg tagtctaaaa gttcgagggc gacttcttct
     3241 tcgtccaatg cgttgcgtcc gactgcgccg ccggcggcga ggttgtagcc gctttcttcg
     3301 acaatgattt tcggccacag cattccgggg gtgtcgtaca gccagaagtc gtcggcaagg
     3361 aaaaggcgtt gttcggcttt ggtgatgccg ggttcgttgc cggttttggc ggattttttg
     3421 cctatcatgc cgttgatgag ggtggacttg ccaacgttgg ggatgccgca gatgaggacg
     3481 cgcaggggtt tatctatgcc ttggcggtgg ggaatcatgg cacgacaggc ttgggtaatt
     3541 ttgccgtgtg cgcctgtttc ggaggaatcg agggcgatgg cgcaggtgtc ggggcggctg
     3601 ttatagtgtt cgagccagat tttggtgcgc tcggggtcgg caagatcttg tttgttgagg
     3661 attttaagtt taggtttgcc tttggaaagt tgggcaagca gggggttttc gctggaggcg
     3721 ggcattcgcg catccagcat ttcaatcacc atgtctacgc ttttggcgcg ctcggcgatg
     3781 gcttttttcg ctttgttcat atggccggga aaccattgga ttgccatgtc tttcctttct
     3841 tttcaatatt tgaaatgccg tctgaaacgg aggacggggt ttcagacggc ataatggttt
     3901 gacggaatta gcggtctgac aggttttgcg cctgtctgtg ccgtatcagc aattcataac
     3961 gccctttcaa ccttcgggcg agtttttcga caatatagac cgaacggtgc tgtcctcccg
     4021 tgcaaccgat ggcgacggta acgtagctcc tgctttcatc ctccaaacgc ggtaaccaat
     4081 gcgtaacaaa cctttcgatg tcgtcaacca tttcctgcac aagcggctgt ccgtccaaat
     4141 aatcccaaac gggcttgtcc ataccggtgt aaggcctcaa ctcgggatcg taatacgggt
     4201 tgggcaggct gcgcatatcg aacataaaat ccgcgttgtt cggcacaccg tatttgaacc
     4261 cgaaggactc caaaatcacc agcagcccgg tacgttcgac cttcagccac tgccggactg
     4321 catggcggag ctgttgggca ttcatcttgg aagtgtcgat acaataggcg atttctttaa
     4381 gcgggaacag ccattcccgt tctttcttta agctttccaa caaggtcata tcctgattgc
     4441 tcagaggatg tcctcgcctg gtttcggaaa accggcggac caacacgctt tcttccgcct
     4501 cgacaaacaa aacttcaacc ctgtgcccca gtccgcgcag agaggcaatc tgttcccgcg
     4561 cctgtccgat gtcaatgccg gaacgcacat cgacgctgac cgccaattcg gtttcgtccg
     4621 cacgttcgat atgatacgac accagcgcgg gcaacatttc caaaggcaaa ttgtccacgc
     4681 agaaataacc cgaatcttcc atttggcgca gtgcgacgga cttgcccgaa ccggacaggc
     4741 cgctaatcag gacgatcttc attgtgttgt tcgttttctt taagttgcgt ctgatggcgt
     4801 tccaaaaatt cgcgcgtact gtccttaccg cgcaactgca aaatgtaatt gcgtaccgcc
     4861 gcctcaacca aaacggcgag gttgcgtccg acggcgacgg gcagcgtaac cgaacggacg
     4921 ttgacgttga ggatggattc ggtttcggtg cggatgctca accggtcaag ctgcttcata
     4981 tactcgtcgt ccgcctcgac taaattgata atgagttgca ggattttttt ggggcggatg
     5041 gaagtttcgc cgaaaatatg gcggatattg agtatcccca agccgcgcac ttccaaaaaa
     5101 tcgcgcagca taggcgaaca acgcccttcc agcgtttccg ggccgatgcg gaacagctcg
     5161 accgcatcgt cggcaatcag gctgtggccg cgcgaaatca gttccaatgc caattcgctc
     5221 ttacccaggc cggaatgccc ggtaatcagc acgccgattt caaacacatc gagaaatacg
     5281 ccgtgtttga cggacgatgc cgccaaggtg cgttgcaggt aaatccgcaa cacgtccatc
     5341 agataggggc tttcgagttt ggaagtcagc agtggaatat cgtttttatg acaatagtcg
     5401 cgcagtcccg gggaaaccgg caagccgttt gccacaatga ccaaagacat ggaaatatcg
     5461 aacaggtctc cgaactgata acccgtttcc cccgattcga gacggttcag atattccgac
     5521 tctgccaaac cgaccacttg gatttggttg gggtggataa aattcaggtg tccgaccagg
     5581 gcgaggacgg gcttgtccgc ctctacaccg atacggttgt ccgcacccga attgccggcg
     5641 gcccaggcaa gttgcagttt gtattggttg tcgtcaaaca gccggcggac agagatactg
     5701 ggcatattat tcttcagtca ggatggcgcg ggcttcttcc gcagaagaaa ccgtcatcag
     5761 cgattctctg atgctttttt gggaaaactt gccggccagt ttggacaata cttccaaatg
     5821 ctcgcccgtc gcattttccg gaaccagcaa gataaaaacc agggaaaccg gtttgccgtc
     5881 cggtgcgtca aatccgacgg gttcgcgcgt gcggatgaac gcgcccgtcg cctgcttcac
     5941 gccggcatga cggccgtgcg ggatggcaac gccctgcccc aaaccggtcg aaccgagttt
     6001 ttcacgggca aaaagacatt cgaaaacatc agcatggaac aatgaggatt cgcgttccaa
     6061 aagcaggccc gcttcctcaa acagcctttt tttactgccc acctccatat ccaaaacaat
     6121 atgggacaaa ggcaaaattt cgccgataag gctcataagc ttctcttttc agacatcgca
     6181 aaacagaaag attgtaccga ctgccggggc aaatctcaat cccgcatacg gtacgggctg
     6241 acataacaca gcgttttaaa aacatatttt aacgcttttc ggcacagata gaaatgccgt
     6301 ccaaagcggt ttacggctct tcagacggca ttgccctgcc ttatttcgcg aaaaacgtat
     6361 gggcaaaaat ggcggtaaac cacacccaac caattctgtt gtttgccaaa aacgtttcaa
     6421 aacagatttg ccggacgcgg cttttgatgg cggcatattg gcggtattgc agcagcagga
     6481 cgatggggat tgccgtccaa tatgcccatg ccgcaccgat aaccaccccc aatactgcca
     6541 tcagcagggt aaagccgcca tgacacagca taacggcggc gatgtcgtaa cgcccgaacg
     6601 tgacggcgga ggttttgatg ccgattttca aatcgtcttc tttgtccgcc attgcataaa
     6661 ccgtgtcata cgccagagtc cataacacat tggcggcaaa gagtatccac gcttgaggcg
     6721 gcacgtttcc ggcaacggcg gcaaacgcca tcgggatacc gaaggaaaag gcaagcccga
     6781 gatagagttg gggaatcgga aaaaaacgtt tggtaaacgg gtaagtcagc gcaagaaaca
     6841 gcgcgggcag gctcatcagc caagtcagat gattcagcgg aatcaggcac aatgcggcaa
     6901 gcaggcacaa aaatgccgtc agcagcagcg cttctttttt cttgaccctg ccctgtgcga
     6961 acggacggtt ttttgtacgc tcgacagcac cgtcaaaatc gcggtcggca aagtcgttga
     7021 tgacgcagcc ggcactgcgc attaaaaacg tgccgattgt aaacgccgcc aataccgcca
     7081 aatcgggaat gccgtctgaa gccagccaca atgcccagta ggtcggccac agcaaaagca
     7141 gcgccccaat gggcttgtcc gcccgcatca ggcgcaggta cacatccaaa cggtcggaca
     7201 gtcgtaaaaa taaaggggat ttaggattca tattgccgca cagcttgaaa aaacggtatt
     7261 ttatccgata aagcgtttca gttcgggcag aaaatactcg gtcagcagca tttcctcgcc
     7321 gtgacgggaa aaccgagaac gccgcgcggc aaagtaccgt ccgcatcctt cgccggaaac
     7381 ggcaaactca aacgccgaac gcgccccttc caaatcggct tgaaacagac gctcgcccaa
     7441 agggcgcgtg ccgcagtcca aaatgttttg ccaaaacgcc gaacctatac ggcactcgct
     7501 ccttgcctca acaacaggga taccgtccag cttcaacaaa acttcgcgca ccagcctccc
     7561 tccgcattcc gtctccaatt cgcccagttt cagcagttcc accgaaaatg tatgcggcaa
     7621 ggcgcgcaat gcggcggtca gcgaccgggc tttcaataac cggctcatcg gcaggtcgat
     7681 gccgtctgaa acggcggcgg gcaagtcggg cagccatttc ccaaataggt gttccatatt
     7741 tttcccaatc tttataccgc gtctgttttt gccaactcca tccattccgc ttcggaaaaa
     7801 tcggctttca gacggcattt caagtagctc aggctgtatt gggcgatgtg tgcgtcgcgg
     7861 ctgtcatgaa tatggttgaa tacgaggctg tgcaagcgaa tgccgtattg tttgagcgcg
     7921 gcgaaactga gcagggtgtg attaatgctg ccgagccgac cgctggtaac gaggatgacg
     7981 ggataagcct gttgctgaat ataatcaatg gttaacagct tttccgtcag cggaaccatc
     8041 aaaccgcccg cgccttcgac caagactatt tcgtattgtg ccgccaattc ttgcgtagcg
     8101 gtacggattt tgtccaagtc caaagccctg ccgtccagac gggcggcgag atggggcgag
     8161 gcgggatagc tgaagatttc aggcatagtc agccgccgtt tgtcggcttc ctgcatgggt
     8221 atgcccatga ttttgcggtg aacggcgatg tcttcggcga tgtcttggca accggtttgc
     8281 acgggctttt gcgtaatcac gcttttgccc tgctgcaaca attgttttgc caacataccg
     8341 gtggcgacag ttttgccgat gtccgtgtct atgccgctga cgaagtaaac gcctttcatt
     8401 tgctgtgttc cttcaagatt tgcacggttt tgtcggcaag tttggtcaaa acgccgtctg
     8461 aaataatata cggcggcatc agatacacca gcctgccgaa cgggcgcacc caaatgccct
     8521 gcgccacgca atctgcttga aaacgcgcca tatccacgcc tttatccagc tcgatcacgc
     8581 cgatggcacc caaaacgcgt acgtctttca cgccgcgaat atcccacgcg gctttcagac
     8641 ggccttttaa gatgctttca atgcggcgga tatttgcctg ccagtcttga gacaaaagca
     8701 gtttgaccga agcgcaggca acggcacacg ccagcgggtt tgccataaac gtcgggccgt
     8761 gcataaacac gcccgcttcg ccgcgcgaaa tcgtttcggt aactttttgc gaagtgattg
     8821 ctgccgccag cgtcatatag ccgccgctca aacccttgcc gatgcacata atatccggca
     8881 cgacctccgc gtgttcgcag gcaaacatct tgcccgtgcg cccgaatccg gtggcgattt
     8941 catcaaaaat caaaacgata tcaaactcgt cgcacaaatc gcgcaatccg cgaagatact
     9001 gcggatgata aaaatacatg ccgcccgcgc cctgcacgac cggttccaaa ataaaggcgg
     9061 caatgtccgt atgatgcgct tcaaacaagg cgcggacagg ctgcaaatcc gcctcgtccc
     9121 attcatcgtc gaaacggctt gtcaggttat cgacaaaata acgctgcggc aacgcgctgc
     9181 cgaaaatatg gtgcatcccc gtttccggat cgcagacgga catcgcgttc caagtatcgc
     9241 cgtgataccc gcgccgcacc gtcgccatat tttgttttgc acgcaaaccc cgcgcctgct
     9301 ggtattgcac cgccatcttc aacgcgactt ccaccgaaac cgaacccgaa tccgcataaa
     9361 aaatacgatc cagcccctgc ggcaaaatcc cgaccaacaa tttgcccagc tccaccgccg
     9421 gctcatgcgt caaaccgccg aacatcacat gcgacatctg tttcatctgc gtctcaaccg
     9481 cctgattcaa aacgggatga ttgtaaccgt gtatcgcaca ccaccaagac gacatcccgt
     9541 caatcagccg cgtgccgtcc gccaattcga taaacacccc ttctgcacgt ttgacaggat
     9601 aaacgggaag cggatcggtc atggaagtat agggatggag cagatgggta cggtcgaaat
     9661 caagcaatga tgatgtgtgt tgatgttcag acggcataag tttctctctt ttcttattgc
     9721 tgcattcaaa cgcaaaacgc gtattctact ccgacagacc gcttcccaca cctttccatc
     9781 cgtttcgggc gtaaaaccac gcaacaaatc gtccgcagta taagcgcaca ccgtttcgca
     9841 ttccccaagc ccgattggaa tcagacgacc caacgcccaa tattgtttca cacagcctcc
     9901 gcccaacgct tcaatcagtc atagacaaaa cggcaatcca tacgatacag atcatagcaa
     9961 cagccatcgc aacagcgtta gcaaaatcag gggactccga cataggcgca tagcatctac
    10021 cgatgcacag ctcctcattc ggctctatga ataccatacc catcacaaaa tccaccgcca
    10081 aaaccaggca cggcttctta tacttatgat agatttccac catcctgccc catatatccc
    10141 aaacattcat accgcatatc ccgcaggcaa caaattccga ttgaaggtta cagcc
//
LOCUS       DAXHRP010000064        10188 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.064, whole genome shotgun sequence.
ACCESSION   DAXHRP010000064 DAXHRP010000000
VERSION     DAXHRP010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10188
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.064"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(273..1490)
                     /locus_tag="ACFM72_001155"
     CDS             complement(273..1490)
                     /locus_tag="ACFM72_001155"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HFC6257723.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVEAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1692..2420)
                     /gene="rph"
                     /locus_tag="ACFM72_001156"
     CDS             complement(1692..2420)
                     /gene="rph"
                     /locus_tag="ACFM72_001156"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HFC6257724.1"
                     /translation="MPDYIRTSRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2502..2966)
                     /locus_tag="ACFM72_001157"
     CDS             complement(2502..2966)
                     /locus_tag="ACFM72_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HFC6257725.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3183..3959
                     /locus_tag="ACFM72_001158"
     CDS             3183..3959
                     /locus_tag="ACFM72_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC6257726.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4204..5058
                     /locus_tag="ACFM72_001159"
     CDS             4204..5058
                     /locus_tag="ACFM72_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HFC6257727.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5099..6307
                     /gene="pncB"
                     /locus_tag="ACFM72_001160"
     CDS             5099..6307
                     /gene="pncB"
                     /locus_tag="ACFM72_001160"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HFC6257728.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDDPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6399..8117
                     /gene="argS"
                     /locus_tag="ACFM72_001161"
     CDS             6399..8117
                     /gene="argS"
                     /locus_tag="ACFM72_001161"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HFC6257729.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQAVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDADAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            8669..10087
                     /locus_tag="ACFM72_001162"
     CDS             8669..10087
                     /locus_tag="ACFM72_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC6257730.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFVLTAPTPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGPMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHSKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2322 a         2997 c         2579 g         2290 t
ORIGIN      
        1 cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc
       61 gagtgaatct gttccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
      121 tgttaatcca ctataaattt aatccactat aaatttaatc cactatattt tttgttccaa
      181 agtcaaaata tgccgtccga acattcgggc ggcagacaaa acggcactgc ccgataaagg
      241 cagtgccgtt gtccgtttca aaccgtgaaa catcagccca aattaaaggc tttatgcaat
      301 accctggttg ccagttccat gtatttttca tcaatcaata cggaaacttt gatttcggag
      361 gtggaaatca tttggatgtt gataccctct tcggcgagcg tgcggaagat tttggcggct
      421 acaccgacgt gcgaacgcat acccaaaccg actgcggaga ctttgcacac ggtgtcgtcg
      481 ccgtcgatag aagccgcgcc gatactgtct tgacgttccg acaggatttc caaagtctgc
      541 ttgtaatcgc cgcgcggtac ggtaaaggaa aaatcggttg tgccttcgct gccgacattt
      601 tggataatca tatcgacttc gatgttggca tcggcaaccg cgcctaaaat ctgataggcg
      661 acgccgggtt tgtcgggtac gccgcgcacg ttgatgcggg cttggttttt gtcgaatgcg
      721 ataccggtta cggcagctct ttccatattg tcgtcctctt caaaggtaat taaggtgccg
      781 ttgccgccgt cttgcaggct gctcagtacg cgcaggcgca ctttgtattt tccggcaaat
      841 tctactgaac ggatttgcaa aactttcgag ccaaggctgg ccagctcaat catctcttca
      901 aacgttaccg tatccatgcg gcgcgcttcg ggtacgacgc gggggtcggt ggtgtaaacg
      961 ccgtccacgt cggtatagat ttggcattcg tctgctttga gggctgcggc gagcgcaacg
     1021 gcggaggtgt cggagccgcc gcgtccgagc gtggaaatgt cgccttcgct gctgatgcct
     1081 tggaaaccgg cgacgatgac gactttgccg gcggcaaggt cggcacgcat tttttcgtca
     1141 tcaatgcttt cgatgcgggc tttggtgtgg gcggtatcgg ttttgagggc gacctgccag
     1201 ccggtgtagc ttttggcttc cacgccgatg tctttcaatg ccatcgccaa aaggccgatg
     1261 gttacttgtt cgccggtgga caaaaccacg tccaattcgc gcggatcggg atgctcctgc
     1321 atttcgtgcg ccaacgcgac caggcggttg gtttcaccgc tcatggcgga tacgacgacg
     1381 acgatgtcgt gtccttcggc gcgggctttg gcgacacgtt tggccacgtt tttaatgcgt
     1441 tcgggcgagc ctacggatgt gccgccgtat ttatgtacga ttaacgccat gtttcgtgct
     1501 ttcttgtgtg ggattggtcg ggcagcatgg tttgctggaa aagcggctat tattactatt
     1561 ttttacatga agttcaagaa cggactgcgc tttcccgcct gccgtttgac agcggtcagc
     1621 gaaaaacctg ttctttcaga ttgttgacaa aatgccgtct gaacggtttt cagacggcat
     1681 ccggacgaca atcaggcggc ggacaacgca ttttgctggt gttgcagcag ttcgcctatg
     1741 cctttttgcg ccagtgcaac cagtttgccc aattcgtcca aactgaacgg cgcgtcttcc
     1801 gccgtacctt ggatttcgat gatttttccc gatgcggtca tgacgatatt cacatcactg
     1861 tcgcaaccgg agtcttcggg ataatccaaa tccaaaagcg gcacgccgtt cactacgcct
     1921 actgacacag cggcaacggc ttcgcggatg gggttttcac tcaaaatgcc gtctgaaacc
     1981 agtttgccga cggcgatttg cagcgcgaca aacgcaccgg taatcgaagc cgtacgcgta
     2041 ccgccgtctg cctgaatcac gtcgcagtca atcaagattt ggcgttcgcc gagtttttcc
     2101 atatccacga ccgcgcgcag cgaacgcccg ataaggcgtt ggatttcttg tgtgcgcccg
     2161 gactgtttgc ccgccgaagc ttcgcggcgc atccgggaag cagttgaggc aggcagcatc
     2221 ccgtattccg ccgttaccca gccttggttt ttaccgcgca gaaacggcgg gacgttttca
     2281 tctatggaag cggtacaaat cactttggta ttgccgcatt caataaggca cgaaccgtcc
     2341 gtatgcggca ggaaatgagg ggtgattttg atatcgcgca ggctgtccgc ggcgcgcgag
     2401 gtgcggatgt aatcaggcat actgccctcc cgttaaaaac agataaatta aaaagcctta
     2461 aatatgaaaa atcacattta aggccttcaa actgaaaatt tctacgcctc ttcggctttg
     2521 ctgcggataa tcaaaagcgg caggtggctt tggcgcatta ccgtttcggc aaaactgccc
     2581 attaaaaggt gcatcagtcc ggtacgtccg tgcgtaccca acaccagcag gtcggcaccg
     2641 ttttcatcgg cataatcaac caaatcctgc gccatttcac gcgcaccctt attggcaacc
     2701 agcaggtgtt tgacggtatt ttccacaccc agttcccggg cggtgcgctc ggcggcatcc
     2761 aaaacttcgt tgccttgcgc gacggcggcg gcttcgtagc tttcgtgttg caaaaattcg
     2821 ggggcgagcg ccatatattc ggcaggattg gcaacgtgta ccaaagtcag acgcgcaccg
     2881 ttgaccccgg caagctcggc ggcatgtttc agggcattga tggacgtttc actgccgtca
     2941 acggcaacaa ccagatgttt gtacatatcg tattctcctt ttgcaccgcc tcgcggtgcc
     3001 ctcttgtcgg atgggcgcag ggacagtttg cgccgtttca ttatagaccc gctgtcgggc
     3061 tttatacaac agccgaacag cccgaccgct ttccagtata atatgccgct tccgtgcagt
     3121 caggcatttt ttgccggctt tcgttcactt tttgatttga cgcaatcttg caggattcga
     3181 ccatgtccga caacgctttg acctcttcgc gacgcttcgg cggcatcgcc agactctacg
     3241 gagactctgc cttggcgcac ttttcacagg cacacgtctg cgtagtcggc gtgggcggtg
     3301 tcggctcgtg ggcggtcgag gctttggcgc ggacgggcat cggacgtttg actttgattg
     3361 atttggacaa cgttgccgaa tcgaatgtca accgccagct gcacgccctg accggcgact
     3421 tcggcaaagc aaaagttacc gccttgcgcg aacgcattac acaaatcaat ccgcaatgcg
     3481 aagtgtttga aattgaagat ttcgttaccg aagacaattt gccggaatac ttcggaaaag
     3541 gttttgattt cgtcatcgac gcgatcgacc aagtgcgcgt caaagcagca atggcggctt
     3601 attttgtgga acgcaaacaa ccgtttgtcc tcagcggcgg cgcgggcgga caaaaaaatc
     3661 cggcgttaat ccaaaccgcc gatttgagcc gcgtaaccca cgacccgctg cttgccaacc
     3721 tgcgctacac cttgcggaaa cgctacggat tcagccgcga tacgaaagca aatatgcgcg
     3781 tgccttgcgt gtattcgacc gaaaatatcg tgccgccgca gtctagggag gcttgttcgg
     3841 cagatgccgc tccgcaaggc ttgtcgtgcg ccggctacgg tgcaagcatg ctcgttaccg
     3901 cttcgttcgg gctatattgc gcacaggcgg cggtggaaca catcgcagac aaaaaataag
     3961 caatgccgtc tgaaacagga ttcagacggc atttgaacaa acgcggcaat caagctgtcg
     4021 gttcagaaaa accaacatcg gcacgcctaa aaccgtattc acaacctgct ccttttcaaa
     4081 acatttgcat ttaaaagccg ttataatgcc gtctgaacat ctgcccgacc acattatgcg
     4141 tgaatgtcgg cagattgttt tcttttgtaa acttatatta aaatccactt accgattcac
     4201 gccatgccgc ccatccctgc cccatccgca ccatccgagc acactgtcgc atgggtattc
     4261 ggccaacccg ttaccgattt gccgcaggat ttgtttatcc cgcccgacgc gctgaaagtc
     4321 gtattgggca gttttcaagg ccctttggat ttgctgctct accttatccg caagcagaac
     4381 atcgatgttc tcgatattcc gatggtgaag attaccgagc agtatctgca ctacatcgcc
     4441 caaatagaag cctatcagtt tgatttggcg gcggaatatc ttttgatggc agcaatgctg
     4501 attgaaatca aatcgcgcct gctgctgccg cgtaccgaaa ccgtcgaaga cgaagaagcc
     4561 gacccgcgtg ccgagttggt gcgccgcctg ctggcttacg aacagatgaa gctggcggcg
     4621 cagggtttgg acgcgctgcc ccgagccgga cgggatttcg cgtgggctta cctgccgctg
     4681 gaaattgccg tcgaagccaa gctgcccgaa gtctatatta ccgacttgac gcaagcgtgg
     4741 ctgggtattt tgtctcgggc aaaacacacg cgcagccacg aagtaatcaa agaaaccatc
     4801 tccgtgcgcg cgcaaatgac ggcaatcctg cgccgtttga acggacacgg gatatgcagg
     4861 tttcacgacc tgttcaatcc cgaacagggc gcggcttacg tggtcgtcaa cttcatcgca
     4921 ctgttggagc ttgccaaaga aggtttggtc ggaatcgtac aggaagtcgg tttcggagaa
     4981 atccgaatca gcctcaatca tgagggggca cattcagacg gcatttccgg cacacggggc
     5041 gggcgcgatg tgttctaata cgccccaagc cgccaccaaa aatcgggaga cacgccatat
     5101 gaccggcatc atacattcgc tgcttgacac cgacctctac aaattcacta tgctgcaagt
     5161 ggttctgcac cagtttccgc agacgcacag cctttacgaa ttccgctgcc gcaacgcctc
     5221 gaccgtctat ccgcttgccg acatcaagga agacttggaa gccgaactcg acgcgctctg
     5281 ccggctgcgc ttcacccacg acgaactcgg ctatctgcgc tccctgcgtt tcatcaaaag
     5341 cgactttgtc gattatctcg aactcttcca gctccaacgc cgctttgtcg aaatcggcac
     5401 agacgataaa gaccgtctga acatccgtat cgaaggtccg atgatacagg cgatgttttt
     5461 tgaaatcttc atcctcgcca ttgtcaacga actttacttc cgccggctgg aaacccctgc
     5521 cgttatcgaa gaaggtgaac gccggcttca agccaaagcc gcgcgcctca aagaaatcgc
     5581 cgccgcacaa aaccccgacg atccgccctt cctgatttcc gacttcggca cgcgccgccg
     5641 ctacaagctc gcgtggcagg aacacgtcat ccgcaccctg ctcgaagccg ccccaagcat
     5701 cgtgcgcggc accagcaatg tctttctcgc caaaaaactc ggcattaccc ccatcggcac
     5761 catggcgcac gaattcctcc aagccttcca ggccctcgac gtacgcctgc ggaatttcca
     5821 aaaggccgcg ctcgaaagct gggtgcacga ataccggggc gatttgggcg ttgccctgac
     5881 cgacgttgtc ggtatggatg ccttcctgcg cgatttcgac ctctatttcg ccaaactttt
     5941 cgacgggctg cgccacgaca gcggcgaccc ttacgtttgg ggcgacaaag cctacgccca
     6001 ctatcaaaag ctcaaaatcg acagccgcac caaaatgctg accttctccg acgggctgga
     6061 catcgaacgc tcttgggcat tgcaccaata tttcaaagac cgcttcaaaa ccggcttcgg
     6121 catcggcacc aacctcacca acgatatggg gcatacgccc ttgaatatcg tcttgaaact
     6181 ggtcgaatgc aacgggcagt ccgtcgccaa gctgtccgac tctccgggca aaaccatgac
     6241 caacaacagc accttcctcg cctacctgcg ccaagtgttc gacgtacccg aacccgaaac
     6301 gccgtaaacc ggcagaaaaa gcgcacaatt cctgtttctg ccgcataaaa tcttttaaaa
     6361 taccgcctga tttgaattta accgaaagac cgaacttcat gaacctacat caaaccgtcg
     6421 aacacgaagc cgccgccgcc tttgccgccg caggcatcgc cgacagtccc gttgttttgc
     6481 agccgaccaa aaatgccgaa cacggcgatt tccaaatcaa cggcgtgatg ggtgcggcga
     6541 aaaaagccaa acaaaacccg cgcgaactgg cgcaaaaggt cgccgacgca ttggcaggca
     6601 acgccgtcat cgaaagcgcg gaagtcgccg gtcccggttt tatcaacctg cgcctgcgcc
     6661 ccgaatttct cgcgcaaaac attcagacgg ccttgaacga cgcacgtttc ggcgtggcaa
     6721 aaaccgacaa accgcaaacc gtcgttatcg actattcttc gcccaatctg gcgaaggaaa
     6781 tgcacgtcgg ccacctgcgt tccagcatca tcggcgacag catttcgcgc gtgttagaat
     6841 ttatgggcaa taccgttatc cgtcaaaacc acgtcggcga ctggggtacg cagtttggca
     6901 tgttggtcgc ttatttggtc gagcagcaaa aagacaatgc cgcgttcgag ttggcggatt
     6961 tggagcagtt ttaccgcgcc gccaaagtgc gctttgacga agaccctgcc tttgccgaca
     7021 ccgcacgcga atacgttgtg aagctgcaag gcggcgatga aaccgttttg gcattgtgga
     7081 aacagtttgt cgatatttcg ctctcgcacg cccaagccgt ttacgacacg ctgggcttga
     7141 agctgcgccc tgaagacgtg gcaggcgaat cgaaatacaa cgacgatttg caagccgtgg
     7201 tcgatgattt ggttcaaaaa ggcttggcgg tcgaagacga cggcgcgaaa gtcgtgttct
     7261 tggacgagtt taaaaacaaa gaaggcgaac ccgccgcatt tatcgtgcaa aaacaaggcg
     7321 gcggcttcct ttatgcttcc accgatttgg cgtgtctgcg ctaccgtgtc ggcacgcttc
     7381 atgccgaccg cctgctgtac gtcgtcgacc accgccaagc cctgcacttt gagcaactct
     7441 ttaccacttc acgcaaagcc ggctatctgc cggaaaacgt cggcgcggca tttgtcggct
     7501 tcggcacgat gatgggcaaa gacggcaaac cgttcaaaac acgcagcggc gacaccgtga
     7561 aactggtcga tctgctgacc gaagccgtcg aacgcgccac cgctttggtg aaagaaaaaa
     7621 atcccgaatt gggcgcggac gaagcggcaa aaataggcaa aaccgtcggc atcggcgcgg
     7681 tcaaatacgc cgacttgagc aaaaaccgca ccagcgatta tgtgttcgac tgggacgcca
     7741 tgctctcgtt tgaaggcaac accgccccct atctgcaata cgcctacacc cgcgtgcaaa
     7801 gcgtgttccg caaagcaggc gaatgggacg cggacgcgcc aaccgttttg accgaacctt
     7861 tggaaaaaca actggccgcc gagcttttga aatttgaaaa cgtgctgcaa agcgtggcgg
     7921 acacggcgta tccgcactac ctcgccgcct acctctatca aatcgctacc ttgttcagcc
     7981 gcttctacga agcctgcccg attttgaaag ccgaaggcgc aagccgcaac agccgcctgc
     8041 aactggcgaa gctcaccggc gacacgctga aacaaggctt ggatttgctg ggcatcgatg
     8101 tgttggacgt aatgtaaaac cgcaccgccc gattgcggac aacagccccg caatcaaccg
     8161 gcggaccatc cttatccgaa tctgaaaaaa gcggcgcgat acaccgtatc cgccgcctcc
     8221 caaaatgcga aacagacaaa cgccaagcaa gcaagcaagc aagcaagcaa gcaagcaaaa
     8281 aattataacc cccttcctgc cgacgcacgc actttccgcg cggcgcgttc cccttttccc
     8341 gctcctcaaa cccgcctttt cttcaggcag ggtttcagcc cgcctccttt ccctgttttc
     8401 cttccctcaa cacgcgtgcg cgccccctgc cgcaccgtgc cgcactttcg cgcccggacg
     8461 gcatcggtct gtcatccggt tctctgtttt aaatacccct gtttcagaaa gaaattctag
     8521 atgcttcaac acacaggacg acatataaag cgtcgcccta tatgttgccc tgatttggaa
     8581 ggggttacgc ctcccaaata aagcctgatc ctgccgcccc gaaggacaga tgtccgagtg
     8641 gcgaagtttc aaccgaaaag gaaatacgat gaatattcac accctgctct ccaaacaatg
     8701 gacgctgccg ccattcctgc cgaaacggct gctgctgtcc ctgctgatac tgcttgcccc
     8761 caatgcggtg ttttgggttt tggcactgct gaccgccacc gcccgcccga ttgtcaattt
     8821 ggactacctt cccgccgcgc tgctgatcgc cctgccttgg cgtttcgtca aaattgccgg
     8881 cgtattggca ttttggctgg cggttttgtt tgacgggctg atgatggtga tccagctttt
     8941 cccttttatg gatctcatcg gcgccatcaa cctcgtcccc ttcgtcctga ccgcccccac
     9001 cccttatcag ataatgaccg ggctgttgct gctgtatatg ctggcgatgc cgtttgtgtt
     9061 gcagaaagcc gccgccaaaa ccgacttccg gcacattgcc gtctgcgccg ccgttgtggc
     9121 ggcagccggc tatttcaccg gccatttgag ttactacgac cgggggccga tggccaatat
     9181 cttcggcgca aacaacttct attacgccaa aagtcaggcg atgctctaca ccgtcagcca
     9241 gaatgccgac tttattaccg ccggcctggt cgatcccgtc ttcctcccct tgggcaatca
     9301 acagcgtgcc gccacgcatc tgaacgagcc gaaatctcaa aaaatcctct ttatcgtcgc
     9361 cgaatcttgg gggctgccgg ccaatcccga acttcaaaac gccacttttg ccaaactgct
     9421 ggcgcaaaaa gaccgttttt cggtttggga aagcggcagt tttcccttca tcggcgcgac
     9481 ggtcgaaggc gaaatgcgcg aactgtgcgc ctacggcggt ttgcgcgggt tcgcactgcg
     9541 ccgcgcgccc gacgaaaaat ttgcccgctg cctccccaac cgtttgaaac aagaaggtta
     9601 cgccaccttt gcgatgcacg gcgcgggcag ttcgctttac gaccgcttca gctggtatcc
     9661 gagggcgggc tttcaagaaa tcaaaaccgc cgaaaacctg atcggtaaaa aaacctgcgc
     9721 cattttcggc ggcgtgtgcg acagcgagct gttcggcgaa gtgtcggcat ttttcaaaaa
     9781 acacagcaaa ggattgtttt actggatgac gctgaccagc cacgccgact atcccgaatc
     9841 cgacattttc aaccacaggc tcaaatgcac cgaatacggc ctgcccgccg aaaccgacct
     9901 ctgccgcaac ttcagcctgc acacccaatt cttcgaccaa ctggcggatt tgatccaacg
     9961 ccccgaaatg aaaggcacgg aagtcatcat cgtcggcgac catccgccgc ccgtcggcaa
    10021 cctcaatgaa accttccgct acctcaaaca ggggcacgtc gcctggctgc acttcaaaat
    10081 caaataacaa caatgccgtc tgaacgcacc aacagccttc agacggcatt ttgcagacag
    10141 accgaccctt caagcccact tttttcatca tctccgataa attgcttt
//
LOCUS       DAXHRP010000065         9981 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.065, whole genome shotgun sequence.
ACCESSION   DAXHRP010000065 DAXHRP010000000
VERSION     DAXHRP010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9981
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.065"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(131..466)
                     /locus_tag="ACFM72_001163"
     CDS             complement(131..466)
                     /locus_tag="ACFM72_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC6257731.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            595..1500
                     /gene="mtrA"
                     /locus_tag="ACFM72_001164"
     CDS             595..1500
                     /gene="mtrA"
                     /locus_tag="ACFM72_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HFC6257732.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     VVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1562..2050)
                     /locus_tag="ACFM72_001165"
     CDS             complement(1562..2050)
                     /locus_tag="ACFM72_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC6257733.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2197..3099
                     /locus_tag="ACFM72_001166"
     CDS             2197..3099
                     /locus_tag="ACFM72_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC6257734.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPCWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3140..4270)
                     /locus_tag="ACFM72_001167"
     CDS             complement(3140..4270)
                     /locus_tag="ACFM72_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6257735.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4475..7099
                     /gene="alaS"
                     /locus_tag="ACFM72_001168"
     CDS             4475..7099
                     /gene="alaS"
                     /locus_tag="ACFM72_001168"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HFC6257736.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADMARELGIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPAVLDSVKDWVGAKLV"
     gene            complement(7188..8210)
                     /locus_tag="ACFM72_001169"
     CDS             complement(7188..8210)
                     /locus_tag="ACFM72_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC6257737.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VVFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(8264..9415)
                     /locus_tag="ACFM72_001170"
     CDS             complement(8264..9415)
                     /locus_tag="ACFM72_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC6257738.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQYLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
     gene            9779..>9981
                     /locus_tag="ACFM72_001171"
     CDS             9779..>9981
                     /locus_tag="ACFM72_001171"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257739.1"
                     /translation="MLLPNDSKPCRNPVSSKRCLGHVPTKLNIKGRLKNNFQTASLYQ
                     KQPAHSKIEVQAAFCDDWKKHTL"
BASE COUNT         2461 a         2641 c         2380 g         2499 t
ORIGIN      
        1 cgcttacccc ttgtttctca aatgccgtct gaaaaaacgg ctgcatatgt tgtctacaaa
       61 atatcgggaa gcataacagg caaaatgccg tctgaaatat tttcagacgg catttcttat
      121 ccgaaacgga ttatttttgc gtttcaaccg cttccaatgc acgcagggca taagtgtaag
      181 cggcaccggc attcagggcg atggcggttg ccaatgcgcc tgcgatttcg ctgtcggtcg
      241 caccggcttt ggcggcagcg gcggcgtgaa cgctgatgca gctctcgcaa cgagtggtaa
      301 tggcaacggc gatggcaatc agttcgcgcg ttttggcatc aagtgcttcg gcggcggcgg
      361 cctgttccaa tgcgccgtag gcctgcagca ttttaggatg cgccttaccc agctcgccga
      421 acgatttttt aaccaatgcg gtatgttctt tccaatcttt aaacattttc ttttcctttc
      481 tcttgcgttt aaccctgata cgcgcttgcg tatctgtttt cgatgtgcgt attattgcaa
      541 ttattcagtt gtgtttctcg tttaatcatc tcattttatg gttcaaaaag atttatggac
      601 attctggaca aactggtcga tttcgcccaa ttgacgggca gtgtggatgt gcagtgcctt
      661 ttgggcggac aatggtcggt acggcatgaa accttgcaac gcgaaggatt ggtacacatt
      721 gttacatcgg gcagcggcta tctctgcatc gacggcgaaa cttccccgcg tccggtcagt
      781 acaggggata ttgtattttt cccgcgcggc ttgggtcatg tgttgagcca cgacggaaaa
      841 tgcggagaaa gtttacaacc ggatatgcgg cagcacggtg cgtttacggt caagcagtgc
      901 ggcaacggac aggatatgag cctgttttgc gcccgtttcc gctacgacac ccacgccgat
      961 ttgatgaacg ggctgcctga aaccgttttt ctgaacattg cccatccgag tttacagtat
     1021 gtggtttcaa tgctgcaact ggaaagcaaa aaacctttga cggggacggt ttccgtggtc
     1081 aacgcattgt cgtccgtcct gctggtgctt atcctgcgcg cctatctcga acaggataag
     1141 gatgtcgaac tctcgggcgt attgaaaggt tggcaggaca aacgtttggg acatttaatc
     1201 caaaaggtga tagacaaacc ggaagacgaa tggaatgtcg acaaaatggt ggcggctgcc
     1261 aatatgtcgc gcgcgcaact gatgcgccgt ttcaaaagcc gggtcggact cagcccgcac
     1321 gcctttgtga accatatccg cctgcaaaaa ggcgcgttgc tgctgaaaaa aaacccggat
     1381 tcggttttgt cggtcgcact gtcggtaggc tttcagtcgg aaacgcactt cggcaaggcg
     1441 ttcaaacggc aatatcacgt ttcgccgggt caataccgga aagaaggcgg gcaaaaataa
     1501 atcggggctt caaacgcaaa tgccgtctga aaaggctttc atacagcatt tgcgtaccgc
     1561 gtcatttcaa gggctgcatc ttcatcactt ccatcaaaaa gttggtaaat gcggggttgt
     1621 tgggtttgac atccatattt ttccaacgct gctgccagcc gcgcaaggca ttctggatat
     1681 acagcttgga ctgttccgta ttgattgcgc cccgctggct gtctatcgcc gaacgcaggt
     1741 agatttcata catactgtca tcgacggcat tgcgtccgac caggcgtttt ctgaagttgt
     1801 tcagatattg cgccgcctga accttggtca ttttaccgat acccacctga tagcccaagc
     1861 gcgtcgcttc atcgctgatt ttggcaacat ccgtccaatg cgaagaggca aggcggaaac
     1921 cttttgcagg tgcttccgtt ttgacggtat tgataggatt cacggggatt tccgtcaatg
     1981 tgggcacata aatagactgg cagccggaaa gaactgccac aatggaaaga gggataaggt
     2041 attttttcat gcccccatta taatcaagtt tgccttgaga aaacaaattg ttcggcaaga
     2101 aaaataaaat ttcggcatca gaagcaggca aaaacacatt ccacaagcct tgccgcaagg
     2161 tttacaatcc gaccgtcctt atcgcaacga ccgtttatgg ataccgcaaa aaaagacatt
     2221 ttaggatcgg gctggatgct ggtggcggcg gcctgcttta ccattatgaa cgtattgatt
     2281 aaagaggcat cggcaaaatt tgccctcggc agcggcgaat tggtcttttg gcgcatgctg
     2341 ttttcaaccg ttgcgctcgg ggctgccgcc gtattgcgtc gggacacctt ccgcacgccc
     2401 cattggaaaa accacttaaa ccgcagtatg gtcgggacgg gggcgatgct gctgctgttt
     2461 tacgcggtaa cgcatctgcc tttggccacc ggcgttaccc tgagttacac ctcgtcgatt
     2521 tttttggcgg tattttcctt cctgattttg aaagaacgga tttccgttta cacgcaggcg
     2581 gtgctgctcc ttggttttgc cggcgtggta ttgctgctta atccctcgtt ccgcagcggt
     2641 caggaaacgg cggcactcgc cgggctggcg ggcggcgcga tgtccggctg ggcgtatttg
     2701 aaagtgcgcg aactgtcttt ggcgggcgaa ccctgctggc gcgtcgtgtt ttacctttcc
     2761 gtgacaggtg tggcgatgtc gtcggtttgg gcgacgctga ccggctggca caccctgtcc
     2821 tttccatcgg cagtttatct gtcatgcatc ggcgtgtccg cgctgattgc ccaactgtcg
     2881 atgacgcgcg cctacaaagt cggcgacaaa ttcacggttg cctcgctttc ctatatgacc
     2941 gtcgtttttt ccgccctgtc tgccgcattt tttctgggcg aagagctttt ctggcaggaa
     3001 atactcggta tgtgcatcat catcctcagc ggcattttga gcagcatccg ccccactgcc
     3061 ttcaaacagc ggctgcaatc cctgttccgc caaagataaa aaatgccgtc cgaacatcct
     3121 tcagacggca tatcgggctt tatttccccg ccttcacatc ctgccactgg cgcaccataa
     3181 acttcaatgc cgccggctgg ataggcacca tgataaagct gtttttcaaa tcctcctcgg
     3241 ttgggaaaat cgtattgtcg tttttaaatt cgtcttccat cagctcacgc gccggcttgc
     3301 tcgaaggcgc ataagtaacg aaattgccgt ttttcgccga cacttccggg tcgaggaagt
     3361 cgttgatgta tttgtgcgcg ttggcgacgt ttttcgcatc tttcggaatc acgaaagaat
     3421 ccacccaaat ccccacgccc tctttgggca tcatcacgcg gattttttcc ttgccgcccg
     3481 cttcttcggc acggcgtttg gcgatgttca aatcgccgcc gaaaccgatt gttacgcagg
     3541 tatcgccgcg cgccaaatca tcgataaagc cggacgaagt aaagcgtttg atattggggc
     3601 ggtttttctt gagcagggcg gttgcctccc tgatgtcttc cgtattgctg ctgttcgggt
     3661 ttttacccaa atagttcaac accataggat agatttccgc cgcgctgtct aaataactga
     3721 taccgcattg tttgagtttg gacgtgtatt cggggtcgaa caccaaatcc cactggttgt
     3781 ccggcagctt gtccgtaccc aaagcctttt tcacgcgttc ggtattgatg gcgaaggtat
     3841 ttgtccccca ataaaacggc acggcgtatt cgtggccggg atcgaccccg tccatcagcc
     3901 tcatcatttc gggattgagg tgtttataat tgggaatcag cgatttatcg attttctgat
     3961 acgcacctgc cttaatctgc ctgcccacaa acgcattgga cggcgcgaca atgtcgtaac
     4021 cggattttcc ggtcagcacc ttgctttcca gcgtttcatc gctgtcgtac acatcataag
     4081 taaccttgat gccgtttttc ttttcaaaat cggcaacggt ttccggatcg acgtattccg
     4141 accagttgta aattttcaat acgtttcggt tttccgccgg cgccggtttt tcggcaggcg
     4201 gtttgtccga accgccgcac gctgcaagca gcaaagcagt caggacggcg agtggcagat
     4261 gtttggccat tatcattcct tgcatatcgg gttggagaaa gcggtcatta tagccgatat
     4321 tggcaacagg gcttcagacg gcattcaaaa tcccgccaca cccttccgaa aaccgccgct
     4381 tccatagcta gaaacaggga tttgcggtaa gataccgccg ttcgttttcc ctgcttttac
     4441 catgacaaga catttgagag acattgaaaa aattatgaaa acctccgaac tgcgccaaaa
     4501 attcctaaaa ttttttgaaa ccaaaggcca caccgtcgtc cgctcttcca gcctcgtgcc
     4561 gcacgacgac ccgaccctgc tgtttaccaa cgcgggcatg aaccagttta aagacgtatt
     4621 cttaggtttc gacaaacgcc cgtacagccg cgccaccacc gcgcaaaaat gcgtacgcgc
     4681 aggcggcaag cacaacgact tggaaaacgt cggctacacc gcccgccacc acaccttctt
     4741 tgaaatgatg ggcaacttct ccttcggcga ctacttcaag cgcgacgcga tccacttcgc
     4801 ttgggaattt ctgacttccc ccgaatggct caatatcccc aaagacaaac tgttggcgac
     4861 cgtttacgcg gaagacgacg aagcctacaa catctggttg aacgaaatcg gtatgccgtc
     4921 cgagcgcatc gtccgcatcg gcgacaacaa aggcgcgaaa tacgcgtccg acaacttctg
     4981 gcaaatgggc gacaccggcc cttgcggccc ctgctccgaa attttctacg accacggcga
     5041 agaaatctgg ggcggcattc ccggcagtcc cgaagaagac ggcgaccgct ggatcgaaat
     5101 ttggaactgc gtatttatgc agttcaaccg cgacgaacaa ggcaatatga acccgcttcc
     5161 caaaccttcc gtcgataccg gtatgggctt ggaacgcatg gccgccgtca tgcagcatgt
     5221 tcacagcaac tacgaaatcg acttgttcca agacctgctc aaagccgttg cccgcgaaac
     5281 cggcgcagct ttcagcatgg aagaaccaag cctaaaagtc atcgccgacc acatccgctc
     5341 ctgctcattc ctgattgcag acggcgtatt gccttccaac gaaggccgcg gctacgtatt
     5401 gcgccgcatt atccgccgcg ccgtgcgcca cggttacaaa ctgggtcaaa gcaaaccgtt
     5461 cttccacaaa ctcgttgccg atttggtcaa agagatgggc ggtgcctacc ctgagttgaa
     5521 agagaaacaa gcacaaatcg aagaagcgtt gaaaaacgaa gaaagccgtt ttgcccaaac
     5581 gctggaaact ggtatggctt tgttggaaaa cgcgctggcc aaaggcggca aaacactcga
     5641 cggcgaaatc atcttcaaac tctacgatac ctacggtttc ccctacgacc tgactgccga
     5701 catggcgcgc gaactgggca tcgaactgga cgaagcaggc ttcgagcgcg aaatggaagc
     5761 ccaacgcgca cgcgcacgcg ccgcccaaag cttcaaagcc aacgcccaac tgccttatga
     5821 cggtcaagac accgagttta aaggttatag cgaacgccaa accgaatcca aagtcctcgc
     5881 cctctacaaa gacggcgagc aagtcgacga attgaacgaa ggcgacagcg gcgcagtcgt
     5941 catcgacttt accccgttct atgcagaatc cggcggccaa gtcggcgatg tcggctatat
     6001 cttctcaggc gaaaaccgct ttgaagtacg cgatacccaa aaaatcaaag cggccgtatt
     6061 cggtcaattc ggcgtacaaa cttcaggccg tctgaaagtc ggcgacagcg ttaccgccaa
     6121 agtggacgac gaaatccgca atgccaatat gcgcaaccac agcgcaaccc acttgatgca
     6181 caaagccctg cgcgatgtat tgggcagaca cgtcgaacaa aaaggctctt tggttaccgc
     6241 cgaatccacc cgtttcgaca tttcccatcc ccaagcggta actgccgaag aaatcgccga
     6301 agtcgaacgc cgcgtcaacg aagccgtttt ggcgaacgtt gccgtcaacg ccgccattat
     6361 gagcatggaa gacgcgcaaa aaaccggcgc catgatgctc ttcggcgaaa aatatggcga
     6421 cgaagtacgc gtattgcaaa tgggcggttt ctctaccgaa ttgtgcggcg gcacgcacgt
     6481 ttcacgcacc ggcgacatcg gcctcttcaa aatcatcagc gaaggcggta ttgccgcagg
     6541 cgtgcgccgt atcgaagcca tcaccggcct gaacgcactc aaatgggcgc aagagcaaga
     6601 gcgtttggtg aaagacatca ttgctgaaac caaagcccaa accgaaaaag acgtactggc
     6661 gaaaatccaa gcaggcgcgg cacacgccaa agcattggaa aaagaattgg cacgcgccaa
     6721 agccgaactc gccgtccacg caggcgcaaa actcttggac gacgcaaaag acttgggcgc
     6781 agccaaactc gttgccgccc aaatcgaagc cgacgcagcc gccctgcgcg aaatcgtaac
     6841 cgacctgacc ggaaaatccg acaacgccgt gattctttta gcggcagtaa acgacggcaa
     6901 agtctccctg tgcgccggcg tatccaaagc cctgaccggc aaagtcaaag caggcgatct
     6961 ggttaaattt gcagccgaac aagtcggcgg caaaggaggc ggcagaccag atttggcaca
     7021 ggcagggggc acggatgccg gcaaattgcc cgccgtgttg gatagcgtga aagactgggt
     7081 cggcgcgaag ctggtttgat gtgggaaagg cagcctgaaa gggattcagg ctgccttttg
     7141 tgttaaagat gccgtctgaa agatattttc agacggcctc tgtcagttta tttggcttta
     7201 tacctaccat tgaatagcga ttcagaaggt atccagccat ctgccaaatc atccaacatc
     7261 ttaatccaat actctaggcg tttttctgtc gggacgcttt ctccccaata ttcgacaatt
     7321 agagcatcat ccatttccaa agcagctttt tcaatttcat gctcaatcaa ttttaaagat
     7381 ttttctacat agtttccgcc acggtagtct tccgccgagt tggcaacgct gcccgcactg
     7441 aataagtccc gcgcctgatg acaaagcaca ccgcgatagg taatcagata caggacggca
     7501 ttatcgtatt tgtgcttcgc cctgcctgag cagacaatac ggggggagac taatgctgct
     7561 tcagctcgga ggcggatttt ttcttcctgc ggcagggaag tgtaaaggcg cacttccaaa
     7621 ggcagatcat ggctgtctac tgcgtcaatg tcttctatcc accataaccg ctcgccttct
     7681 ttcagcctgt tacgggcata ttttcggata tattccattt tttcatgcat atccaaatcg
     7741 gcaaattcag cataggaaat accgaaaccc tcaaacagag acggtcgatc agattctatt
     7801 tctacctcaa agcgcggaac atgcgatgtg cggacatgaa ttacgctatc ttcgtaaagt
     7861 tgccatttca catcgggaat gccccccatt tttccgaata ccacatagat atgctgtaca
     7921 ccgtcagctt tgtttttctc ttggatactg tttgctacgc tgcgccaagt atcttttagc
     7981 gtgaatttga cttctacgcc atattcccct attggaacat cggggaaaat ttgcggcaca
     8041 ggttcaggat tgataactat gtcagcataa gcgggaattt ttgcaatgca cagcgcacga
     8101 actctgtttt caaaaatatc ttgggatttg aaaggtgcgt tttttgcctc ttgcctcaat
     8161 acggtgcaaa cctcgtctaa aaacttctca aactcctttt ttgtcagcat aatgcattac
     8221 cacttaaaaa tataaagtag taattttatc ttatttaaca gggttattta agtgccttac
     8281 taacggcggc ggcgatgtgc caccctaaaa caggagggac ggcgttgcca atttgccgtt
     8341 ctgtggcacg caattttgcc tggaaaataa aattgtcggg aaacgattgg atgcgcgccg
     8401 cctcacgcat ggagatgcgg cggggtaatt cgtaatgcca ctgtatgttt ccatggcatt
     8461 ctgccctaat agtgtagccc gccctttcgg catccaattt tcgactacct tgatcggggc
     8521 ttttttctgc tctactccaa atatggttgg caatttcgtc ttctactttg tcgaccaaat
     8581 cgcctatagc ctgtctagct gttacatagc tgttgctggt atttgttttt tcaatctgta
     8641 tttcgggaat ttcaggtagc cttccaacga tgataactcg ctcccgagtc tgtggaacac
     8701 cgtaatcggc tgcattcagc aagtagtaat ctacctgata acccaaattg cgaaaatctg
     8761 aaagcactgt ttccaaatct ttccgatgat gcttcatcag tagccctttg acattttcag
     8821 caacaaatat tttggggcga acgcgttcaa cagcagacaa catggcttta tacagcccgc
     8881 tgcggctgcc tgaaatacct gcacctttac cattaataga aatatcctga caaggaaagc
     8941 caccgataat gatgtctgcg ctagtgggta tttcatccaa atactgccaa atatcaccat
     9001 gtacaatgtg atttcctaag ttgtggcggt aggttctaac agcgtgttcg tcgatttcgt
     9061 tcgcccaaat aatatcaaaa tcatgtttgt cataagtacg gtttaaaaac tcaaagcccc
     9121 ccagaaaacc caaatccatt ccgccacaac cgctaaataa agaaataatt ttatattttt
     9181 tttcgcggtc ttcttgcttt tcctgtttgg tcattaactc catacattta agataaaaag
     9241 catgggaaaa agtacctcta tttactttgt tacaaattgc atttgccgtt tcactttccc
     9301 cttgctccaa gaataattct gataattgta taaagccaat tccatgctca tgcattttgg
     9361 cttttatggc atctccagct aacttgttcc aattttttcg tgcaaattcg gtcatggtta
     9421 atctttcagt cattcataaa tgacattatt ttagcgtttt ttatagttta agccaagatt
     9481 taaaatctac ctttaggttt acaggccgtc tgaaaacaaa aatctcgttt tcagacgacc
     9541 tttttccgct aaaatccccc taccgtccaa cccgaaacaa ggagaaccat catgcaagtt
     9601 cctacttccg ccatcatcaa cggcgaattt gccgacaaat acggcaaacg cggcagcaag
     9661 ccgtagccag cacccctgtc aaccgcgtgc gtggctagac cacacaccct accactgcgg
     9721 gcgacgcaaa ccttaagatt gaggtgtagg gtgtgcgcgg tacgcacgca cgcggttttt
     9781 gttactaccg aatgattcca aaccatgccg taatccagtc agcagcaaac gctgcttggg
     9841 tcatgtacca acaaaactca atatcaaagg ccgtctgaag aataattttc agacggcttc
     9901 tctctatcaa aagcagcctg cacattcaaa aatcgaagtg caggctgctt tttgtgatga
     9961 ttggaaaaaa cacacactat t
//
LOCUS       DAXHRP010000066         9843 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.066, whole genome shotgun sequence.
ACCESSION   DAXHRP010000066 DAXHRP010000000
VERSION     DAXHRP010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.066"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(128..1174)
                     /gene="adhP"
                     /locus_tag="ACFM72_001172"
     CDS             complement(128..1174)
                     /gene="adhP"
                     /locus_tag="ACFM72_001172"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HFC6257740.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATYCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SGVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1457..1846)
                     /locus_tag="ACFM72_001173"
     CDS             complement(1457..1846)
                     /locus_tag="ACFM72_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC6257741.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFKTYDKNKLKQNEYFDITLSEVSPDHFTLQADPNPTTND
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2072..3250
                     /locus_tag="ACFM72_001174"
     CDS             2072..3250
                     /locus_tag="ACFM72_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HFC6257742.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKILYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3316..5250
                     /locus_tag="ACFM72_001175"
     CDS             3316..5250
                     /locus_tag="ACFM72_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HFC6257743.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5568..6350)
                     /locus_tag="ACFM72_001176"
     CDS             complement(5568..6350)
                     /locus_tag="ACFM72_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFC6257744.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6489..8678
                     /locus_tag="ACFM72_001177"
     CDS             6489..8678
                     /locus_tag="ACFM72_001177"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HFC6257745.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPQGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSVQTAFSDEPPLPESWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     VKLIENWAEQGWIETTEAAKPVLRSYHGQASHSEFVLNANQRQASDAIQTALGRFRPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLRAMSGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHAAAQLPQVEIL
                     NAGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHRESIPFKCPDCGNQDLTAVGHGTQRVEETLRSFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RKMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8724..9797)
                     /locus_tag="ACFM72_001178"
     CDS             complement(8724..9797)
                     /locus_tag="ACFM72_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC6257746.1"
                     /translation="MRPFFVGAAVLAILGALVFFINPGAIVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCAR
                     LIWLDRNTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILL
                     GAEALKECRLKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTSLAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGSV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVPILFAAAVSRTFLMNVNPIFFITIPAILTAV
                     VFTLYLFTFVPIFRANAFTGDPE"
BASE COUNT         2307 a         2548 c         2859 g         2129 t
ORIGIN      
        1 gacgtgttgc gatacgggtt ttcagacggt atttcaaaca gaacagatta aaatcaaatc
       61 caaatccata aaaaatgccg tctgaacagc gttcagacgg catttcgatg tgtactgcca
      121 cgtcaaatca gtggtgatgg ccgcagccgc attctttttt catatcgatt accatacggc
      181 cggtgatttt gccttcgcgc atttcttgga aaatggcggg tgcttcatcc aaagcacgca
      241 gttggacttt cggcacaacc aaaccttccg cgccgaattg gaaggcttct tccaaatctt
      301 tgcgcgtgcc gaccaaagag ccgaccactt cgatgccgtc caaaaccaaa cgcgggatgg
      361 acaaatccat cgattccggc ggcagcccga tggcaaccac acgtccgcct gcgcggacgc
      421 aattcacggc agagttgaat gcggcagcag atacggcggt tacgaccgca gcgtgtgcgc
      481 cgccggtttt ttcctgaatc actttggcag cgtcttcttt ggcggcgttg acaaccaaat
      541 ccgcgccggt ttctttggca aacgccagtt tgtcgtcgtt gatgtcgatg gcgacaacgt
      601 gcgcgccgaa tacttttttc gcgtattgga cccccaagtt gcccaaaccg cccgcgccgt
      661 agatggcaat ccactgtccc ggacgaacgc cggaaacttt aatggcttta taagtggtca
      721 cgccggcaca agtaatgctg gaagcttgcg caggatccaa accttcaggg actttgaccg
      781 cgtaatcggc actcacgatg cagtaggtcg ccataccgcc gtcggcagta taacctgcgt
      841 tcaatacaga gcggcacaag gtttcgcggc cggtattgca gtattcgcaa gaaccgcagc
      901 tttggaacag ccaggcgatg ctgacgcggt cgccgacttt cagatttttc acaccgtcgg
      961 caacttcttt aaccaaaccg atgccctcgt gtcccagcac gcggcccggt ttttcgccgt
     1021 agtcgcctgc cgcaacgtgc aggtcggtgt ggcacacgcc gcaatattcg acttcgacca
     1081 acgcctcgcc gtattccaac gggcgaacct cgcgttcgac tatttccaca tcgcccgcta
     1141 catttttatt cacaacaact gcctgcattt tcatgattgc gctccttagt tacggcaaaa
     1201 aaacctgtaa acggaatgtt gtccgatata agggtaagca tacgcttccg catctcacag
     1261 gtcaagtggt atgttgttga aaaatataga ttatatgtta tattataaca tcttggaaag
     1321 gcacggcatc ggggcggttg ccggatgagg ggcggcaggt ttcaagtttg aaaaaccgga
     1381 cggcaaaccc gtaaagatac cgtctgaagc tgtgtccgga cggcatcttt acgggtttgc
     1441 gggcttcggc ggaggattag tcgaagccgg ggcaggattg gtttgtaccg gaagcggcaa
     1501 tggtaccgcc gtcgttgagc gtaacgacgc aggtttcgcc gtcgttggtg gtgggattgg
     1561 ggtcggcctg aagggtaaag tggtcggggc tgacttcgct taaagtgata tcgaaatatt
     1621 cgttttgttt cagtttgttt ttgtcgtagg ttttaaacgt ccctttttgg cggtagtaac
     1681 gttccatggt ctgcgcgttg tgcagcaggg tcgtcctgac ttccgacagg cggacgcgcc
     1741 ggatgtaggt tttataggaa gggtaggtga tgagcgtcag gatgccgagg atggcgacgg
     1801 caatcatcag ctcgagcagc gtaaagcctt tttgaacgtt tttcatagca atgtgtttcc
     1861 atttgtttgt cggtcgacgg cattataacg ccgtatcgga aatggcggaa tatgtaaacg
     1921 gattgaaatt ttcgggaaag cagattgtat aagccattta aaacaaatgg ttatttttat
     1981 tgtcggcagt ttgccgcctt ggatggggca gggacttgcg gtagaatccg cttccgattt
     2041 atgggattga cgcatacaga gaattgaaaa catggcaaaa atgatgaaat gggcggctgt
     2101 tgcggcggtc gcggcggcag cggtttgggg cggatggtct tatctgaagc ccgagccgca
     2161 ggctgcttat attacggaaa cggtcaggcg cggcgacatc agccggacgg tttctgcaac
     2221 aggggagatt tcgccgtcca acctggtatc ggtcggcgcg caggcatcgg ggcagattaa
     2281 gatactttat gtcaaactcg ggcaacaggt taaaaagggc gatttgattg cggaaatcaa
     2341 ttcgacctcg cagaccaata cgctcaatac ggaaaaatcc aagttggaaa cgtatcaggc
     2401 gaagctggtg tcggcacaga ttgcattggg cagcgcggag aagaaatata agcgtcaggc
     2461 ggcgttatgg aaggaaaacg cgacttccaa agaggatttg gaaagcgcgc aggatgcgtt
     2521 tgccgccgcc aaagccaatg ttgccgagct gaaggcttta atcagacaga gcaaaatttc
     2581 catcaatacc gccgagtcgg aattgggcta cacgcgcatt accgcaacga tggacggcac
     2641 ggtggtggcg attctcgtgg aagaggggca gactgtgaac gcggcgcagt ctacgccgac
     2701 gattgtccaa ttggcgaatc tggatatgat gttgaacaaa atgcagattg ccgagggcga
     2761 tattaccaag gtgaaggcgg ggcaggatat ttcgtttacg attttgtccg aaccggatac
     2821 gccgattaag gcgaagctcg acagcgtcga ccccgggctg accacgatgt cgtcgggcgg
     2881 ttacaacagc agtacggata cggcttccaa tgcggtctac tattatgccc gttcgtttgt
     2941 gccgaatccg gacggcaaac tcgccacggg gatgacgacg cagaatacgg ttgaaatcga
     3001 cggcgtgaaa aatgtgctga ttattccgtc gctgaccgtg aaaaatcgcg gcggcaaggc
     3061 gtttgtgcgc gtgttgggtg cggacggcaa ggcggcggaa cgcgaaatcc ggaccggtat
     3121 gagagacagt atgaataccg aagtaaaaag cgggttgaaa gagggggaca aagtggtcat
     3181 ctccgaaata accgccgccg agcaacagga aagcggcgaa cgcgccctag gcggcccgcc
     3241 gcgccgataa acgaatatgc cgtctgaaca cggaaacggt ttcagacggc atttgttatt
     3301 gatttacgga atattatgag cttgatcgaa tgtaaaaaca tcaaccgcta tttcggcagc
     3361 ggcgagaacc gcgtccatat tttgaaagac atcagcctgt cgatagagaa gggcgatttt
     3421 gtcgccatca tcgggcagtc cggttcgggc aagtccacgc tgatgaacat actcggttgt
     3481 ttggataccg ccggttccgg ttcgtaccga atcgacggca tcgaaactgc caaaatgcag
     3541 cctgacgaac tggcggcatt gcgccgcgaa cgcttcggct ttatcttcca acgctacaac
     3601 ctcttaagct cgctgaccgc aagggataac gtcgcgctgc cagccgtcta tatgggcgcg
     3661 ggcggcaaag agcgttccgc gcgggcggac aaactcttgc aggatttggg tttggcaagc
     3721 aaagagggca acaagcccgg cgaactctcg ggcggacagc agcagcgcgt ctccatcgcc
     3781 cgcgccctga tgaacggcgg agaaatcatc ttcgccgacg agccgaccgg cgcgctcgat
     3841 accgccagcg gcaaaaacgt gatggaaatc atccataagc tgcacgaagc cgggcatacc
     3901 gtcattatgg tcacgcacga ccccggcatc gccgccaatg ccaaccgcgt catcgaaatc
     3961 cgggacggcg aaatcatttc cgacacctcg aaaaatccag aaatccccgc aagcaatgtc
     4021 gggaggattc aggaaaaagc ctcgtggtcg ttttattacg accagtttgt cgaagccttc
     4081 agaatgtcgg tgcaagcagt attggcgcac aaaatgcgtt cgcttctgac gatgctcggc
     4141 atcatcatcg gtatcgcttc ggttgtctcc gtcgtcgcat tgggcaatgg ttcgcagaaa
     4201 aaaatccttg aagacatcag ttcgataggg acgaacacca tcagcatctt cccggggcgc
     4261 ggcttcggcg acaggcgcag cggcaggatt aaaaccctga ccatagacga cgcaaaaatc
     4321 atcgccaaac aaagctacgt tgcttccgcc acgcccatga cttcgagcgg cggcacgctg
     4381 acttaccgca ataccgacct gaccgcttct ttgtacggcg tgggcgaaca atatttcgac
     4441 gtgcgcggac tgaagctgga aacggggcgg ctgtttgacg aaaacgatgt gaaagaagac
     4501 gcgcaggtcg tcgtcatcga ccaaaatgtc aaagacaaac tctttgcgga ctcggatccg
     4561 ttgggtaaaa ccattttgtt caggaaacgc cccttgaccg tcatcggcgt gatgaaaaaa
     4621 gacgaaaacg ctttcggcaa ttccgacgtg ctgatgcttt ggtcgcccta tacgacggtg
     4681 atgcaccaaa tcacaggcga gagccacacc aactccatca ccgtcaaaat caaagacaat
     4741 gccaataccc aggttgccga aaaagggctg accgatctgc tcaaagcgcg gcacggcacg
     4801 gaagatttct tcatgaacaa cagcgacagc atcaggcaga tagtcgaaag caccaccggt
     4861 acgatgaagc tgctgatttc ctccatcgcc ctgatttcat tggtagtcgg cggcatcggc
     4921 gtgatgaaca tcatgctggt gtccgttacc gagcgcacca aagaaatcgg catacggatg
     4981 gcaatcggcg cgcggcgcgg caatattttg cagcagtttt tgattgaggc ggtgttaatc
     5041 tgcgtcatcg gcggtttggt cggcgtgggt ttgtccgccg ccgtcagcct cgtgttcaat
     5101 cattttgtaa ccgacttccc gatggacatt tccgccatgt ccgtcatcgg cgcggtcgcc
     5161 tgttcgaccg gaatcggcat cgcgttcggc tttatgcctg ccaataaagc agccaaactc
     5221 aatccgatag acgcattggc acaggattga ggttggacaa agatgccgcc tgaagctgca
     5281 gaaccggtca ttttggagca gaaacttatt ggacaaaaac ggtttcttag attctacgtt
     5341 ccagattccc acttgcgtgg gaatgacggc ggtgtgtttc gtattgttca atttattatt
     5401 ttcaatcatt caatgggtta ggatgtgttt gttggcttgc tgtactggtt taaatttaat
     5461 ccactataaa tttaatccac tataactttc agtgcggatt ggttttcagg cggcatttcc
     5521 cgcaaaaaag gcttggaatt ttccaagcct tttgttttgc ggatggatta ttgatttttg
     5581 cggatgattt cctccagttg gggcatcggg ctgtagccgc tttggctgcg cccgttgggg
     5641 aagacgaggg tcggcgtgcc gttgaagccg aattgttcgc ccaaggaagt ggtttccgcg
     5701 acgggattgt cgcagatgct gccgccgacc gggaatttgc ctttacgcat ccaatccgtc
     5761 cacgctttgg cgcggtcggg ctgacaccat aagatttgcg ccttgcgcgc ggcatcgggg
     5821 tgcaggccgg caatgggcat cataaagctg taaaccgtca cgtcggtcat tttttcaaac
     5881 tcgtgttcca agcgtttgca gaacggacaa tcggggtcgg agaagacggc gactttcagc
     5941 ttgccgttgc cgcgcacttc tttgatggct ttgtccaaag gcagggaggc gaagtcgatt
     6001 ttgttcaaat cggcggcgcg ttcttcggtc aggtttttgc gcgtgtcgat gttgatgagt
     6061 tcgccgacga acatatagcc gccttcggca tcggtgtaga taatctgcct gccgctgacg
     6121 acgacttcgt aaatgccttt gaccggtgtt tcgctgacgc tcaacacttt caaatcttgg
     6181 gcggaatagg ttttttccaa acgcgctttc aaagaggcgg caacggattt gccggcggac
     6241 tcggctttga cggcgggttc ggcgttggca ttggaaacgg gcgtttgccc gcaagccagc
     6301 agcgggagga cggtaaaggg ggtcaagatt ttgattaact tggttttcat ataaagatga
     6361 ttgcgcgtgt tggaaaagcg gaattgtatc aaatctctgt tgcgcctgca ttgcgcctag
     6421 gctcaattta tcgtctgaaa atagcttatg cctgttaaaa tacgcaaaaa aatgatttgc
     6481 ctgcctgtat gatctaccac cgcatcgccg taaacgtgcc gctttcagac ggccttttga
     6541 cttattccca ttccgatccg ctgccgcagg gcacgcgggt gcttgtgcct ttccgcaata
     6601 aaaccgtggt cgggatggtg tgggaaacgg atattgcgcc cgatatggat acggcgcgga
     6661 ttttgagcgt tcagacggcc ttttcggacg agccgccgct gcccgaaagc tggcgtgatt
     6721 tgttggcgtt tacgtcgcgt tattaccact atccgacggg gcaggcagta tttgccgcac
     6781 tgccgcaggg tttgaaggaa acgcgcgcgg tggaaatgcc gcagccgcca ttgttttatg
     6841 ctttaaacga agcaggcagg gcgcaaacgc cgccgccggc gcggttcaac aaaaaagcgg
     6901 ctttgtggga cgcgctgctg tcgggcgaaa tgacgatggc agcgttgaag caggtaaacg
     6961 cgcaggcggt gaaattaatc gaaaattggg cggaacaggg ttggattgaa acgacggaag
     7021 cggcgaaacc cgttttaagg tcgtaccacg ggcaggcttc gcactctgaa tttgtgttga
     7081 atgccaacca acggcaggct tccgatgcca ttcagacggc attgggacgc ttccggccgt
     7141 ttctgctgta cggcatcacc ggcagcggca agaccgaagt gtatttcgat gcgatggcga
     7201 aagtgttggc tcaggggcgg caggtgttgt ttctgttgcc cgaaatcaac ctcacgccgc
     7261 agcttttgaa gcgggtggaa aaccgttttg ccgacgtgcc gaccgccgtg ttgcacagcc
     7321 ggatggcggc aggcaggcga acgcaggatt atctgcgcgc gatgtcgggg caggcgaagc
     7381 tggtgatcgg cacgcggctg gcggtgttca cgccgatgga tgatgtcggg ctgattgtgg
     7441 tcgatgagga acacgacggc tcgttcaaac aggacaacga attgcgctac cacgcccgcg
     7501 atttggcggt gtggcgggcg aagcagggcg gctgtcccgt cgtgttgggc agcgcgaccc
     7561 caagcttgga aagctggcac aaggcacaaa gcggcgcgta ccgcctcttg caactgaccg
     7621 aacgcgccca tgccgccgcg caactgccgc aagtagaaat cctcaacgca ggccgtctga
     7681 aactcgacaa cggtttctcg ccgcaagcct tgcagcttct gaaacagaat tttgaagcag
     7741 gcggtatgtc gctggtgtac ctcaaccggc gcggctttgc gcccgcgctg ttttgcggcg
     7801 actgcggcca taccttcggc tgcccgaact gctccgccaa aatggtgttg caccaacgcg
     7861 cccgccaact gcgctgccac cactgcgacc accgcgaatc catcccgttc aaatgccccg
     7921 actgcggcaa ccaagacctg accgccgtcg gccacggcac gcagcgcgtc gaagaaaccc
     7981 tgcgctcctt cctgcccaag gccgccgtcg tccgtgttga cagggacagc acggcgcaca
     8041 aaaacgactg ggcggatttg taccgccgca ttgccgacaa cgaaatcgac attctggtcg
     8101 gcacgcagat gctcgccaaa gggcatgatt tcgcgcggct caacctcgtt atcgtgttga
     8161 acgccgacgg cagcctgtac agcgcggact ttcgcgcgcc ggaaaggctg tttgccgagc
     8221 tgatgcaggt gtccggcagg gcggggcgcg ccgacaaacc cggcaaggtg ttgatacaga
     8281 cccaactgcc cgaacatccc gtcttcgccg ccgttaaagc gcaggactac gccgtgtttg
     8341 ccgaaaacga attgaatgag cgaaaaatgt tcgccatgcc gcctttcggt tttcaaaccg
     8401 ccgtccgtgc cgatgcgccg cgcgttgccg atgcgatgga atttctcaat gccgccaaag
     8461 aaaccctcgc cccgctgttg cccgaaagcg tttcccagtt cggcgcggcc ccgatgctga
     8521 tggtgcgcct cgccgaacgc gaacgcgcgc aaatcttcct cgaatcgaca tcccgacagg
     8581 atttgcaccg tgccgtgagt ttgtgggtgc aggtgttgca gcaaaaccgc gacggcaaaa
     8641 tcagatggtc ggtggatgtc gatccgcagg aggcttgatt atcggcaata cgatgccgtc
     8701 tgaaaccgtt tcagacggca tttttattcc gggtcgcccg taaacgcatt cgcccgaaaa
     8761 atcggaacaa acgtgaaaag ataaagcgtg aacacgacgg cggtcagaat cgcggggatg
     8821 gtgatgaaga atatcgggtt cacgttcatc aagaaagtgc gcgagacggc ggcggcgaag
     8881 aggatgggga cggcaatgcg gcagagtttg gggtagtcga gtttggtaaa gccgctgtgc
     8941 cacagtccgg cggtcagcca caccatcatc acgctgccca tcatgccacc gagggtaatc
     9001 aggtgcaggg gcgcggaggc gggcaggttt tgtaatttcg ccgcgcctgt ccacaaatag
     9061 cctgcggcgg caaagagttg gagcaggtaa taagtgcgga cgtagtgttt gcgcaggagt
     9121 tcgtgatggt gaagctcacg cagcttggca agcaggataa agccgacggc gagcgaggta
     9181 aaaccggcgg tttgcgcagg cagccaaagt tcggcggcgg cgtgcaggag caggaaggta
     9241 atggcgatgt ttttatagac gacattgggg atgaatactg ggtctttcag acggcattct
     9301 ttcagggctt ccgcgcccaa aagaatactg acgcgcacgg atacgaacat caccgccgcc
     9361 atatttagat gcacttgcgc gcgcaacagg ttcaaatcgc cgctgacggc atatgccgtc
     9421 tgaaaaacag tgaacgcggc aagtaacatt agcagggcga agttgtcggt gtttcggtct
     9481 agccaaatca gccgggcgca gaacagcagc aacaccagcc aataggcggc gacgaaaaac
     9541 gaggcagttt gcggcgaaaa gggcagtata gcggatgcgg cgagcaataa tgccgccatc
     9601 aaagtcgcga caggtttcag gttacccgaa aaacccgtcc agtccaacaa agccgcagtc
     9661 aaaaaaccgc cgtatgccgc cggcagcata agttccaaga aaatttggcg gtgcaggacg
     9721 atggcaccgg ggttgatgaa aaacaccagc gcaccgagta tggcaagcac cgccgcgccg
     9781 acgaaaaacg gccgcatagc aactgtattt ttcaccccgt cgggcaaaaa taccaaaact
     9841 caa
//
LOCUS       DAXHRP010000067         9837 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.067, whole genome shotgun sequence.
ACCESSION   DAXHRP010000067 DAXHRP010000000
VERSION     DAXHRP010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9837
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.067"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(114..809)
                     /locus_tag="ACFM72_001179"
     CDS             complement(114..809)
                     /locus_tag="ACFM72_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC6257747.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAP
                     LTEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(924..3035)
                     /locus_tag="ACFM72_001180"
     CDS             complement(924..3035)
                     /locus_tag="ACFM72_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFC6257748.1"
                     /translation="MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGMDYSREHRNPTLGYSRAFTASIDPYD
                     RASWPASGRLQPILTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GSSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSINTSSSAVFNAD
                     PEYTRQYETGVKSSWLDDRLSTTLSAYQIERFNIRYRPDEQNDPYTWAVGGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAILGWNHKNVNVTFAAANLFNQKY
                     WRSDSMPGNPRGYTARVNYRF"
     gene            complement(3221..3826)
                     /locus_tag="ACFM72_001181"
     CDS             complement(3221..3826)
                     /locus_tag="ACFM72_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC6257749.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALCAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(3875..4273)
                     /locus_tag="ACFM72_001182"
     CDS             complement(3875..4273)
                     /locus_tag="ACFM72_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC6257750.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            4381..5292
                     /locus_tag="ACFM72_001183"
     CDS             4381..5292
                     /locus_tag="ACFM72_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC6257751.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGSLVRLLPEYTVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            5282..6583
                     /locus_tag="ACFM72_001184"
     CDS             5282..6583
                     /locus_tag="ACFM72_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HFC6257752.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCAAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELNKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHADDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAAAHKTDPDGT
                     FVRRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(6651..6821)
                     /locus_tag="ACFM72_001185"
     CDS             complement(6651..6821)
                     /locus_tag="ACFM72_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257753.1"
                     /translation="MLLYRLLGGAEIECGRCPVPPMTDWQHFLLAMGTVSAWVAVIWA
                     YLIIESEKNGRY"
     gene            6975..9125
                     /gene="dinG"
                     /locus_tag="ACFM72_001186"
     CDS             6975..9125
                     /gene="dinG"
                     /locus_tag="ACFM72_001186"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HFC6257754.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LTREEGGDPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQNNAQQNLTGFETPEVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQMTGKIAALTDKAELANLADETAASLLDSLHEWQFHLAE
                     EPSLSLGVSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVIGLNDALS
                     AARREKEQDSALLDRLTGEFGLFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLILRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAIIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            9161..9775
                     /locus_tag="ACFM72_001187"
     CDS             9161..9775
                     /locus_tag="ACFM72_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HFC6257755.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIAAAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         2299 a         2877 c         2531 g         2130 t
ORIGIN      
        1 attctgattt aaaaccataa ggctttaagc aatcatctct tctataaagc ctaaatacaa
       61 aaggccgtct gaaatcctat tttcagatgg cctttactca ttcaatcctc aacttattgc
      121 ggctttttct gctcttcgcg tactttatcc accaactggt caatcgtggt cataccggac
      181 tgccagtctt taaattcaac ttggtatttg ccgccgacaa tcacagtcgg tgtgccgctg
      241 atttggaatt tattggtcaa ctcttccatt tgagccgcac gcgcttggct ttcaggagcc
      301 tcaaatgcag ccaatacttt tttgccgtca aacgctgttt gctcggacag ccattttttc
      361 agggtatcgg tatcggccag attgattttt tgattaacca tcgcatcgaa aatatggctg
      421 ttggctttat ctgattcacc ggccatttcc actgcggccg ccaaacgtgc caaaggtttc
      481 atttcatcac cccacacgac atgctcccgg cgcatatagg tatcgtcttt aaacgttttg
      541 atgtgctcgc tcaagaccgg ctcaagatgg gcgcaatgcg ggcagaagta gccgaaaaat
      601 tccaatactt cgattttacc ggcctgctgt tgcggaatag gcgtagacaa tacagtgtag
      661 ttcacgcctt cggtcaatgg ggctggggct gccggagcag atgagctgct ttggacgctg
      721 tctgccggaa cgctggtttc agcctgtttg ctacaagcgg ccaatgccaa cagggtcaat
      781 gaagtcaaag ctaaggtttt cagtttcata ggtatctctt gtgtgtcaga ttaatgtgcg
      841 gattttatgg cattttattg aaggcgtgtt cgatttgagt gaaaaaatgt gtttagtttt
      901 atttcagcct ttgcctgatt tcatcagaaa cggtaattta cccgggcagt atagccgcgc
      961 ggattacccg gcatagagtc cgaacgccaa tatttttgat tgaacagatt ggctgcggca
     1021 aaggtaacgt tgacattttt atggttccag ccaagtatgg catcaactcg ggcaaagcct
     1081 ggaagcgtag tcacttcttt atttcttgag ttgtaaccgt agcgtttgcc cgtaccggtt
     1141 acgccgattt cgccgtagag gttttcggtc ggggtataac ggaaaaacag gttgccggta
     1201 acgttgctgg tgttattcaa atggatgccc actcggtcgg gattttcttt gtcttcaacg
     1261 actttcgcct gcatcacgcc caacgaaccg cgcagataga gttttttggg gatgatttgc
     1321 ccgatggcgg acaattccac gccgcgcgaa cggtgtttgc cgccgactgc ccaagtgtag
     1381 ggatcatttt gctcgtcggg gcggtagcgg atattgaagc gttcgatttg gtaggcagac
     1441 aacgtagtgc tgaggcggtc gtccagccaa ctgcttttca caccggtttc gtattggcgg
     1501 gtgtactcgg ggtcggcgtt gaacacggcg gaagacgacg tgttgatgct caaatagccg
     1561 ccgcgtccgc cataaggcgc gaagccttta ttatacgagg cgtaaagtgt gtggacggga
     1621 ttgatgttcc acactgcgcc gatgttgggg ctgaacgagt gtccgctgta ttggcggctg
     1681 ctgccggtga gtttgttttc ggaattaaag gtgtatttgt cgtaacgacc gccgaggacg
     1741 aatttcaaat cgggcgtggc ggagaagatg ttttgcacaa agatgccgta ggagtcggct
     1801 ttgtggcggt tttgggtgag gataggctgc aatctgcccg aagccggcca gcttgctcgg
     1861 tcgtatggat cgatggaagc agtaaaggcg cggctgtaac ctaaggtcgg gttgcggtgt
     1921 tcgcggctgt aatccatgcc tacggtcaag tggttttcaa aacggccgat ggtgtagtcg
     1981 ccgtttagcg tgaaattgga cgacagggtt ttgttgtcgg tctgctgcca ggcgtagtta
     2041 cgtttgatta agttgccatt ttcgctgcct gcatagaaat gatcaaaatc ctgcgccgcc
     2101 gtgcggtggg cgagctgcca ttgggcacgc catttgtcgt tgaaggcgta ttcaaggtcg
     2161 gagcgccaaa cttgcagctt gtctttgaca aaatcgttcc ggtgggcgaa ccccatgcgg
     2221 taaggcagtc cgaagcggtc gtacacggac ttggtcggac tgcggtcggg cgtgcgctcc
     2281 acattgtcgt aggtgtattg ccccgtccac ttcaagccgt tgtcgagttt gacggtaatg
     2341 ctgggcgaaa ccatgacatt tttgctgtct atgccgctgc ggaacgaatt ggcgcgcccg
     2401 acttcgccgg tgagacggat ggcgacgttt ttgttcagca cttcgttaat gtccatattc
     2461 aggctgcggt ttgcccatga gccgtaaacc gctccgatgt tgcggctttg tttgaagttg
     2521 gcgtatttgc tgaccatgtt gatgacgccg ccgccgttgg tgcggccgta aagcacggaa
     2581 gacgggcctt tcaggatttc cacgcgctcg atgttggcag tactgcggcg cacttgtccg
     2641 ctttcgcgca cgccgtcgcg gtaaatatcg gatgcgtcgg cttgaaaacc gcgcaggaaa
     2701 atgctttcac cgcgcatatc gtaggcagcg tcgatgccgg cattgccttc gaggatggaa
     2761 ctcaaatcgt tcgtaccgta atttttgttt ttctggatat tgagcgtatc gatggtttgc
     2821 ggcgtttctt tgatgagctg tccgttgcgg gtaacggcgg cttcgtcgta gttgatgtag
     2881 cctttgagta cgctggtgtc ggactgtccg accacggaaa cggtaggtag cgtggcggtg
     2941 taatgttcac cattgtcctg cgtatcggcg gcagcaacag ggaaggaagc aataatcagc
     3001 gtgggtaata aagctaaatg aaatgatatt ttcattttta tactcaattt aacaaaacaa
     3061 ccgaattata ttgcctcacg gaggaaatga gaataatttc ttttaactat attgaacatg
     3121 atatttgtaa acaaaggtct cagaatgcgg aaaactcgcc gcctgatact gaaaaatgcc
     3181 gtctgaacag ggttcagacg gcattttttt gaccgcgaaa ttatgcgccg aacactttca
     3241 aacgttctgc aactggttca aaggtctttt cacctgccgc cccttcaata ccgccgataa
     3301 ccatttgcgc gcgcaacaac cagttttcgg ggatattcca cgctttggca atcgccgcat
     3361 cgggcaaggg attgtaatgt tgcaggtttg cacctacgcc gaccgcggca agtgtcgtcc
     3421 aaacggcata ctgcaccatc gcgttcgcct ggtccgccca aacgggaaag ttggcggcat
     3481 aagcagggaa ctgctcctgc aaacctttga cgacattttg atcttcataa aacaaaatag
     3541 ttgccgcacc cgccttaaac aggttcaatt tttgcgcggt cggttcaaaa ctgtcggcag
     3601 gcacgacggc acacagcgcg tcttcgacaa attgccacac cttatcatgc tcttcgccaa
     3661 acagcacgac cacacgggca gattgggaat tgaacgaaga aggtgtgtgc aaaacggcgt
     3721 gttcgacgat ttggacgatt tcatctttgc cgacgggcag atttttattt aacgaataaa
     3781 tggaacggcg gctttcggca gcctgttgca gagattgacg ggtcatttct tttcctcaaa
     3841 aacattcaac aaaatacact ttaggcagtc tgattcaggc tttacgcttg aaaaacagcc
     3901 tgtccagcga ccatgctccg ccgcccgccg ccgcgatata gaggaatacg aagcagaaca
     3961 gcactgcgga ctcgccgccg ttggcaatcg ggaacaaagc atttccggaa gcatgcgcca
     4021 taaaataggc aaccgccatc tggccggaca aaacaaacgc ggcagggcgc gcaaacaggc
     4081 ccaacaccag caaaatgccg ccgacaattt ctaaaatacc ggcaagcagc aacagcccgc
     4141 cgggcgaacc gctgcccatt tcaatgggga aggcgaagat tttcgacgta ccgtgcaaca
     4201 aaaacaggta agcggttacg atacgcaaaa cagaaagcaa aaccggttgg atacggttgc
     4261 agcaatcgga cataaaagct cctttgatat ttgtcttcat ttcaggcggt agagtataga
     4321 tgtttcccct tttcaaatat atactgcttt tattgataca acttttccac acaagaaaat
     4381 atggacaccc tgttcagcct caaggttttc cgccaagtcg tccaaagcgg cggcttcacc
     4441 cgcgccgccg acgcgctcgg catctccacc gcaatggcaa gcaaacacgt cagccacttg
     4501 gaaaacaccg tccaagccaa actcctgcac cgcaacagcc gcaacctcag cctgaccgaa
     4561 gccggggaag aatactaccg gcaatgcagt tacgcgctcg acacgctcga cgatgccgcg
     4621 caaaaagccg ccggggggac ggaaaaaccg caggggctgc tgcgcgtaac gatgccactg
     4681 tggtttgccg gcagccagat atgcaactgg ctggcggaat accgcgaacg ttatcccgaa
     4741 gtgacattag aactgatttt ggacaaccgc cacgtcgatt tgattgccga aggcgtggat
     4801 ttggcgttgc gcgtttccca aaccctgtcc ccgtcgctga ttgcgcgccc gctggcggaa
     4861 atcgaatttg ccctgctcgc ctcgcccgat ttcctgaggc gcaacggcgt accggaaacg
     4921 ccggaagaag tggcggggct gcccgccgtc ctgccgacct acaccaacca gcagaaactc
     4981 gacctcaccc gcaaatcgga cggcaaaaaa taccggcttg aactgacccc cgtcatccgt
     5041 accgacaaca cgctgatgat gcgcgaaatg attaaggcgg gcgcgtgcat cggttatcag
     5101 ccgctttggg cggcggaaca cgatttgcgc tgcggctcgc tggtgaggct gctgcccgaa
     5161 tataccgtcc cgaccgaccg cctgaatgcc gtttatgcgg acagggcgtt cttaagcgcg
     5221 aaagtccgca gcttcatcga ttttctgaac gaaaaaatcg ccagcaggaa aggctgccga
     5281 aatgccgtct gaaaccgccc gcccccttta tgcggacacg tgcgccgcac acacgctcgt
     5341 ctggttccgc caaaacctcc gcatccgcga caacgccgcc ttatgcgccg ccgttgccga
     5401 aggtttgccc gttatcggta tttggattga cgatgccgaa acagacaacc ctcgccgcgc
     5461 cgcgttctac cgccaatccg ccgccgaact cgcccaaggg cttgcagggc gcggcatccc
     5521 gctctacacg gcggcatcgc ctgccgagct cgtccggctc gccgtccgcc tcaatatccg
     5581 cgccgtcatc gccgacgaat cccatacttt tgccgacaaa ctcgccgaca acgccctttg
     5641 gcatgaattg aacaaacacg gcatcgcgtt aaccttcgtc aatgaccgcg ccgttttcgg
     5701 caaaaccgac ctgatacccg acggcggcac ggcacacacc gatttcgacc gctaccgcga
     5761 agtatggctc gaccgctttt ccaagcagcc ccccgccggt ccggacctat tcgcggcata
     5821 ccgccaaccc ttccccgaaa acctttccgc cccgccgcct gccgcccttt cagacggcat
     5881 cttcctgccg caaaacagcg gcgaaacggc ggcttggcgg cagtggcggc ggtttctcga
     5941 acaggcggat tcctactccg ttttaaagga tttcccctcg cgcaaacaca cttcgctgat
     6001 gggcgcgtat ttgagtgccg gctgcatctc gccgcgcctg ctcgcgcggg aaagcctcga
     6061 acgccgtctg aacgcgtggg cggacaacat catccgccgc gattttttcc ttcaacttgc
     6121 cttgcagcac gcggatgacg acccttcaga cggcaatcca gaacacaccc tgcgcctgac
     6181 gctttggcag cagggccgga ccggcattcc gattatcgat gccgcgatgc gctgtttgca
     6241 caaaaccggc agcctccacc ccgccctgag acgcttgagc gcggattttt tctgccacgt
     6301 tttaaacctc ccccgccgcg aaggcgagat atggtttgcc cggcagctga ccgatttcga
     6361 tgcggcaatc aaccaaggca actggcggct tgctgcctca cggcacacct gccccgacat
     6421 tgccgccgcc gcacacaaga ccgaccccga cggcaccttt gtcagacggc acatccccga
     6481 gcttgcccac ctgtccgccg acaccgtcca cacgccttgg cggtttgcct gttcggtcga
     6541 tacccacggc tatcccgcct atcctgtcgc cggtattccc taagcggtac ggcaacctaa
     6601 aacaaatgcc gtctgaactt ccgtttcaga cggcattgcg tccggatgac tcaatatctt
     6661 ccgttttttt cactttcaat aatcagatat gcccaaatca ccgccaccca agccgacacc
     6721 gttcccatcg ccagcaaaaa atgctgccaa tccgtcatcg gcggtacagg acaacggccg
     6781 cattcgattt ccgcgccgcc caacaaccgg tacagcagca tatccgcaat acaaagcaac
     6841 aacgggtatt tcaaacgctg caaccaaaaa accaaccacg tccgcacgat ttacctcccc
     6901 cattccgaca acgatattgt accgcttccg tgcaatgtta aaataatccc acttctaccg
     6961 ccgtacaaaa cgctatgctc accgatttag aaaaaaacgc catccgcgac cattaccaaa
     7021 atatcggcaa aaatctgccc ggtttccgtc cgcgcgcttc gcagcgggaa atgattgcgg
     7081 cggttgccaa cgctttttcg cggacgttga cgcgtgaaga aggcggcgat ccacccaagc
     7141 gcgagggcga gagcattgcc gtaatcgaag gcccgaccgg cgtgggcaaa tcgcttgcct
     7201 acctgctggc gggcggcatc atggcgcaaa cacgcggcaa gcggctgatt gtgagcagcg
     7261 cgacggttgc cttgcaggag cagttggtag accgcgacct gccgtttttg gtcgaaaaaa
     7321 gcggtttgga actgagcttc gcgcttgcca aagggcgcgg ccgttatctc tgcccctaca
     7381 aactctatca actgacgcaa aacaacgccc agcaaaacct gacgggtttt gaaacgccgg
     7441 aagtgttgtg ggacagcaaa cccaagcccg aagaattgaa gctgctgcgc gacatcgccg
     7501 acgaattttc cgcccgacgg ttcaacggcg accgcgacac ttggccggaa aaaatcgatg
     7561 acgcgatttg gctcaaagtg accaacgacc gccacggctg cctgaaaacc gcctgtccca
     7621 accgtccgga atgccctttt tacctggcac gcgatgtctt ggaaaccgtc gatgtcgtcg
     7681 ttgccaacca cgatcttctg cttgccgaca tcagcatggg cggcggtgta attctgcccg
     7741 cgcccgaaaa cagtttctat tgtatcgacg aagcgcacca cctgcccaaa aaagccctca
     7801 gccgttttgc cgccgaacat tcatggaata ttgccgtttg gacgctggaa aaactgccgc
     7861 agatgaccgg caaaattgcc gcgctgaccg ataaagccga acttgccaac cttgccgacg
     7921 aaaccgccgc atcattgctc gacagcctgc acgaatggca gttccatttg gcggaagagc
     7981 cgtctttaag tttgggggtg tctgaaaacg acagacgaac caacagcgaa ccgacttggc
     8041 tgtgggaaga cggcaaaatc cccgaaggcc tcgaaaccac cgtttccaac accgccattg
     8101 ccgcacgcag cctgctcaaa cacgttatcg ggctgaacga tgcgctttcc gctgcgcgcc
     8161 gcgaaaaaga acaagacagc gcgctcctcg accgcctgac cggcgagttc ggtcttttta
     8221 tcgcccgtat cgaacaaatc agcgcggttt gggatttgct ctccaccgtc cccctcgaag
     8281 gtgaagaacc gctggcaaaa tggataaccc gccgcgccga cgacaaaaac gactacattt
     8341 tcaacgccag ccccatcagc agcgcgtccc acctcgccaa cagtctgtgg cggcgcgcgg
     8401 caggcgcggt gttgacctcc gccaccctgc aatccttggg caactttaac ctgatattgc
     8461 gccaaaccgg gctgcaatgg ctgcccgaaa ccaccaccct cgccctcaaa agcccctttg
     8521 actttgaaaa acagggcgaa ctctacatcc ctcccatata cgccagcccc aaagaccccg
     8581 aagcccacac cgccgccatc atcgaatggc tgcccaagct tatttcgccc accgaagcca
     8641 tcggcacgct cgtcttgttt tcctcgcgca aacaaatgca ggatgtcgcc ctgcgcctgc
     8701 ccggagacta cctgccgctc ttgctcgtac aaggcgaatt acccaaagcc gtcctcctgc
     8761 aaaaacacca ccgggccata gaagaaggca aagccagcat catcttcgga ctcgacagct
     8821 ttgccgaagg actcgacctg cccggcaccg cctgcgtgca agtcatcatc gccaaacttc
     8881 ccttcgccat gcccgacaac cccatcgaaa aaacccaaaa ccgctggata gaacagcgcg
     8941 gcggcaaccc tttcatcgaa atcaccgtcc ccgaagccgg catcaaactg atccaggccg
     9001 tcggccgcct catccgcacc gaacaagact acggccgcgt aaccatcctc gacaaccgca
     9061 tcaaaacgca gcggtacggc caacaattat tggccggcct gccaccgttt aaaaggatag
     9121 ggtaaacata ccgcccttcc cgcaacagaa aggaaaaatc atgaacttca cccgactgct
     9181 caaccaagtc ttaagcacgg ttcaaaaaaa aggcaacaca ttctccgaca gcccgctcaa
     9241 ttcattcggc ggaggcgcgc tggttgccgg tgtcgcctcc atgctgctga acggtaaaaa
     9301 ccgcaaaacc atcaccaaaa tcggttcgac cgccgctttg ggctacctcg cctaccgggg
     9361 ctatcagatg tggcagcaaa acaaagggcg ggcaaccgta acacaaagcg atttccaacc
     9421 tgccggagaa actgaagaaa catacagccg caccgtattg cgcaccatga tagccgccgc
     9481 cgcttcagac ggcatgatag acgaagccga acgccggact atcgaacagg aaagcggcac
     9541 agaccccgaa actgccgcat ggctcgccgc cgaataccgc ctgcccgcaa gcatcgggga
     9601 catcgccgcc gccgtcggca acgatgaggc gttggcggcg gaggcctatc tggcggcaag
     9661 gttggtctgt gccgatttgt cgcggaaaga aaccgtcttc ctcgcccgcc tgtcgcaggc
     9721 tttgaaactg gatgacaatc tggtggagag tttggaaagg caattggggt tttgatgaca
     9781 cagccgggga gggaaaatca tcaaaaaacg gttattccga ccccggcctc aaaacgg
//
LOCUS       DAXHRP010000068         9793 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.068, whole genome shotgun sequence.
ACCESSION   DAXHRP010000068 DAXHRP010000000
VERSION     DAXHRP010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.068"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(9..1304)
                     /locus_tag="ACFM72_001188"
     CDS             complement(9..1304)
                     /locus_tag="ACFM72_001188"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HFC6257756.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLERAQWFW
                     QQSLQAVELVDERVRKHAVDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTRIEP
                     HQNGWLVYTPEGSVECKNLVYAVNTYAGLSPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDHEFIDDPARMTELVRQDMLKVFPQL
                     ADVRIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1430..2317)
                     /locus_tag="ACFM72_001189"
     CDS             complement(1430..2317)
                     /locus_tag="ACFM72_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC6257757.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGACPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAH"
     gene            complement(2317..3282)
                     /locus_tag="ACFM72_001190"
     CDS             complement(2317..3282)
                     /locus_tag="ACFM72_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC6257758.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWSTLNPFGDGENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3298..4422)
                     /gene="potA"
                     /locus_tag="ACFM72_001191"
     CDS             complement(3298..4422)
                     /gene="potA"
                     /locus_tag="ACFM72_001191"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HFC6257759.1"
                     /translation="MTATTASSAKPYLKIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLGNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4617..4724)
                     /locus_tag="ACFM72_001192"
                     /pseudo
     CDS             complement(4617..4724)
                     /locus_tag="ACFM72_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="ACFM72_001193"
     CDS             complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="ACFM72_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HFC6257760.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5295..6230)
                     /gene="secF"
                     /locus_tag="ACFM72_001194"
     CDS             complement(5295..6230)
                     /gene="secF"
                     /locus_tag="ACFM72_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HFC6257761.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6234..8087)
                     /gene="secD"
                     /locus_tag="ACFM72_001195"
     CDS             complement(6234..8087)
                     /gene="secD"
                     /locus_tag="ACFM72_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HFC6257762.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALQNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="ACFM72_001196"
     CDS             complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="ACFM72_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HFC6257763.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAISAKVD"
     gene            8693..>9793
                     /locus_tag="ACFM72_001197"
     CDS             8693..>9793
                     /locus_tag="ACFM72_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HFC6257764.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCQPQKGKIFRL
                     DDDTAISTGSLSAARFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2510 a         2602 c         2432 g         2249 t
ORIGIN      
        1 tgcgacactt aacggctgtc tttccactga taatatttcg agccgaggaa agaaccgagt
       61 ttgcgcaaaa acggttgcag gataatattc ggctggcgca accgctcaaa cggcttcaga
      121 cggcattcgt cccctaaaat tgcttcggca accgccagac ctgcaatgcc tgttatcgcc
      181 atcccgtgtc cggaataacc ttgcgcataa aaaacattcg cggccaaacg tccgaaatgc
      241 gggacaaggt tggcggtaat gtcgcactcc ccgccccacg aatattcgat tctaacatcg
      301 gcaagctgcg gaaaaacttt aagcatatct tggcggacaa gttcggtcat acgcgcggga
      361 tcgtcgataa attcatggtc tttaccgccg aaaagcaatc tgccgtccgc actgaggcgg
      421 taatagtcca aaatatggcg gttgtcgcat actgccatat tgttgcggat aagccctttt
      481 gcgcgcgccc ccaagggttc ggtggcaata ataaaggtgc tgacggcaat cgccttgcgt
      541 tccaaaggct taaatatcgg actcaaaccg gcataggtat tgacggcgta caccagattt
      601 ttgcattcga cgctgccttc gggcgtgtaa accagccaac cgttttgatg cggttcgatg
      661 cgcgtcatcg gggattgctc gaaaatctgc gcaccggctt cggcagcggc acgagcgatg
      721 cccaaagtgt aattgagcgg atgcaggtgt ccggataagg ggtcgaattg tgccccttgg
      781 tacatatcgc tgtcaagctg ctgtttcaac tcggctttat cccaaagttg ataatgactc
      841 gcaccgtaat gccgttgggc gtgttcatgc cactgctgca actcttccca atgctgcgga
      901 cggacggcaa ccgtggcata accgcgctgc caatcacaat cgacggcatg tttgcggacg
      961 cgttcgtcca ccagttcgac cgcctgcaaa gactgttgcc aaaaccattg cgcccgctcc
     1021 aaaccaacct gtttttcaat ttcctccata ccgcaggcgt agtcgctgat aacctgaccg
     1081 ccgctcctgc cggacgcgcc gaagccgata cgcgcggctt ccaacacaac cgtttcatgt
     1141 ccctgctccg ccaagggcaa tgcagtgcac aaaccactca atccgccgcc gatgatacag
     1201 gtatcggttt tcagacggca ttgaagtttc ggataaacag tatgaggatt aaccgaacta
     1261 aaataataag aaggcagata ttcttgaaaa tcaggacgaa tcattatgtt tactttatca
     1321 ggtgtatttt cagacggcat gatatggttt gccgtaccat gccgtctgaa cgggaaatta
     1381 ctttaagaaa acaggctgac ctgataatgc ggtcagcctg ccctgtcggt caatgcgctt
     1441 tctcagcagc caatttttct tggcggtagg cttctgccgc ttctcggtcg cgcttggttg
     1501 cctgcctcat catccaataa ttgacgatga tgaccaatgt tccgatgatg ccgattagga
     1561 tggtcgccaa gacattcatc tgaggatcaa gacccagctt gattttggag aaaatcacct
     1621 gcggcaatgt ggatgaaccg gggccggaga ggaatgaggt aattaccaaa tcatccaaag
     1681 acagggtaat gccgagcaga aagcctgaag cgatggcagg ggcaatcaaa ggcaaagtga
     1741 tgacaaaaaa gattttcagc ggacacgcgc ccaaatccat tgcggcttct tcgagcgatt
     1801 ggtcaagctc aaccagacgc gaacggataa caacggtaat gtacgccata cacagcgtcg
     1861 tatgtccgag gaagatggtg aaaaagccac gatcgaagta gagatgttgt aaccattcgc
     1921 tgccctgcaa aaatatctgt acctgaataa tcagcagcag catagacaga ccggtaatca
     1981 cgtcgggcat caccataggt gcggaaatca tgccagcgaa caaggtactg ccgcgaaaac
     2041 gtttaatccg cgccatcgca tagcctgcca gcgtgcccaa aacgacggcg gcaagcgaag
     2101 acacaacggc aatccgcagc gacagccaag cggcttccaa gatggtgtcg ttttccagca
     2161 atgcgccgta ccacttggtc gaaaagccgc cccaaacggt taccagcttg gattcgttaa
     2221 acgaatagat gaccaaaaca accagcggga tatacagaaa cgccagcgac agtgccaaca
     2281 tcagtttcaa gaaccaagat aatttggatt tctgcattat ttggctcctt cttccaattc
     2341 gcggttttca taatgctgaa acagggcaat cggcacgacc agcagcgcga ccatcacgac
     2401 ggcgacggcg gaagccagcg gccagttgtt ttgatcgaag aacgcctgcc acaagacttt
     2461 accaatcatc aggttttccg aaccgccgac cagctcggga atgacgaact caccgacagc
     2521 agggacgaaa accagcatgg agcctgcaat aatgccggtt ttcgacaaag gcagggtaat
     2581 cgtcaagaac gatttgaccg gccccgcgcc caaatcggaa gccgcttcaa gcaggcggtt
     2641 gtcgagtttc accagttgcg tgtatagcgg cagaatcata aacggcagat aggcgtaaac
     2701 catcaccaaa ttgagcgaaa aggcattgta gaacaaatcc aaaggctcgc tgataatacc
     2761 cattttaatc aacaggttgt ttacaatgcc gttatgcccg agcagaccca tccacgcata
     2821 gacgcgcaac aggaacgatg tccaaaaggg cagcataatg gcaagcagca aaccattgcg
     2881 gacagaagga ttggcacgag aaatcgcata ggcggtcgga taaccgacca acagacaaat
     2941 taccgtcgta gtcagcgcag tcttaattga agaccaataa gtcatcagat agatattgct
     3001 gttttcaccg tcgccgaacg gattgagcgt actccaaaaa ttttggaaga tgtctgcata
     3061 attttggtag ctgacagcaa tattcagacg acccaaatcc tcatctatcg tcgttaaagg
     3121 agtaaacggc gggatggcga tttcttgttc ggcaaagctg attttcagca cgatggcgaa
     3181 cggaatcaga aacagcacca aaagccaaat atacggtacg gcaatcaccg cacgctgccc
     3241 cggacggcgg aacagtttgt ttttcagttt attaaggttc attgcattcc ccttaaatca
     3301 acggaacaac ggagtcggtt ggttttccgg ccagctgata tagacggttt cgtcccaagt
     3361 cggcggtgta atgttgcgca cataccagta aggggcgggg acttggcttt tgacgacgcg
     3421 cccgttgccg agcttgatat ggtaaatggc gaagctgccc aaataggcga tttcttttac
     3481 cgtgcctttc gcccagttgt agtcgcccaa atattcgggt ttttctttat ataaatcaat
     3541 atcctctggt cgaatactaa cccaaaggtc ctgctcgctc ggaccaccca aaccgtgatc
     3601 gatgcggacg tggttttcca aaccttcgca ttcgataacg gcatagtcgg catgatcttc
     3661 aatcaccaca ccgtcaaaga tgttggtttc gccgataaac tcggcagtga agcggctgtt
     3721 gggatagtcg tacacgtcgc tgggtgtgcc gacttgctgc aactgaccgt cagacataat
     3781 ggcgatgcgg gtcgccatcg tcatcgcctc ttcttggtcg tgcgtaacca taatacaggt
     3841 tacgccgact tgttccagcg tattgaccaa ctcaagctgg gtttgttggc gcagtttttt
     3901 gtccaatgca ccgaggggct catccagcag tagaattttc ggacgttttg ccagactgcg
     3961 tgccaaagca atgcgctgct gctgaccgcc ggacaattgg tgcggtttgc gtttagcaaa
     4021 tttggtcatc tgaaccaggc ggagcatttc ttcgacgcgc gcggcgattt cgcctttagg
     4081 cattttgtcc tgtttcagac cgaaggcaat gttttgttct acggtcatat gcggaaaaag
     4141 cgcgtaactt tggaacatca tattgatggg gcgatcatag ggtgcaagtt tggtaatatc
     4201 ctgaccatca aggataattt ttccctgatt gggactttcc atacccgcca gcatacgcag
     4261 cagtgtagat tttccgctgc cggaactgcc caaaagggcg aagatttcgt gttgataaat
     4321 gtccaagtcg atgttatcga cagcgtaatt gtcaccaaac tttttcacca aaccttggat
     4381 tttgagataa ggtttggctg aagacgcagt ggttgcggtc ataatggcaa tactccaata
     4441 aaaagacgag taccggcaaa acggattttc gaatgggtga taaaaagctg tttgattgct
     4501 ggcgggagtt aaacgtttga tgccgtctga aactcttgta aagcgcacgg gcagcatgaa
     4561 atggaacaag attccaaaga actttatatt atattagttt atgcggtttt cgggcaatat
     4621 agtggattaa atttaaacca gtacagcgtt gccttgcctt gccgtactat ttgtactgtc
     4681 tgcggcttcg tcgccttgtc ctgatttaaa tttaatccac tataaatatg gatttgagct
     4741 tgtcggaaag caacagaaaa gaaaacaccg cccatttttc tgggcggtgt cggaaagcgt
     4801 aattatttac gcagacccaa gcgggtaatc aacgcgcgat acgtatcggg ctgggtacgg
     4861 cgcaagtagg ccagcaggcg gcggcgttgg ctgaccattt tcaacaggcc gcgacggctg
     4921 tggtggtctt tggggttggc tttgaagtgg ggggtcaggt cgttgatgcg gaaagtcaac
     4981 agagcgactt gtacttcgga agagccggtg tcgccttctt tgcgttggaa atctttaacg
     5041 atttgtgctt tttgttctac ggtcagtgcc ataatgaaaa ctccaaaaat ataagaatcc
     5101 ccatagggat tcagacaagt ttgccaagcc tgaagacaac ggcaaactcc ctatgcccaa
     5161 gataggacaa cgtggcatta tgacacaatt cccgcatttc tgcacaatat tttaagaccg
     5221 tggaagtaac cgttaaaaat gccgtctgaa gcattgtctg cttgagacgg caatgttcag
     5281 acggcatatg cgcttcaaac cacgatttct tctttcttct tcggttcttt accgatattg
     5341 tcgcggctca aaccgaacat tagcagaagc gggctggcaa ccaatacgga agaataaatg
     5401 ccgaacacga tgccaatggt caacgccata gaaaagccgt gcaaggccgc accgccgaac
     5461 accagcatgg atacgaccat cgcctcggtc gaaccgtggg taatgatggt gcggctcatc
     5521 gttgcggtaa tcgcgttgtc gatgacttcc ggcacggcat gtccgcgcat cgccggcttg
     5581 cggaagtttt cacggatacg gtcgaagacg acgacggatt cgttcacaga atagcccaat
     5641 acggcaagga tacccgccaa gacggtcagc gaaaattccc attggaagaa ggcaaagcag
     5701 ccgagaataa tcacgatgtc gtgcatattg gcgataatgg cagatacggc aaaacgccat
     5761 tcaaaacgca tcgacaggta aataatgatg ccgataacga caaaacctaa agccatcaat
     5821 ccattactta ccaattcctc accgacttgc gggccgataa attcgacttg gcgcaaggta
     5881 acgtcgggac tgtctttttt cagcaaatcc ataacctgat tggacaactg tgcggaagta
     5941 acaccttctt tgttcggcag gcggatcatg atgtgtttgt tcgtacccaa tgcctgaacc
     6001 tgtacatcac ctattttcag cgtatcgagg cgttcgcgca tcttattgac atccgcaccc
     6061 tgctgatatt ggacttccat taccgtaccg ccggtaaatt cgacagagaa attcagacct
     6121 ctggtaacca aaaagaacac ggcagcgata aacgtaacca acgaaatgaa ggtcgtcagt
     6181 ttgccgtagc tcataaacgg aatatcgcgt ttgattttaa agagttccat agcttactcc
     6241 ttacctgccg cagtttcggc ttcaggtttc cataccgcac cgatggaaat attctgcaat
     6301 ttgcgtctgc gtccgtacca cagattgacc aacgcacgga atacgacgac ggaggaatac
     6361 atcgaagtca gaatacccaa acagtgtacg accgcaaaac cgcgtaccgg gccggaaccg
     6421 aataccaaaa gcgcgatacc ggcaatcagc gaagtcaggt tggaatcgac aatggtcgcc
     6481 catgcgtgtt ggaaaccgag attgattgcc tgctgcggcg gcacgccggc acgcaattct
     6541 tcgcggatac gttcgttaat caagacgttg gagtcgattg ccatacccaa agtcaacgcc
     6601 agcgcggcca tacccggtaa cgtcaacgtt gcctgcatgg cagacaaaat accgattagg
     6661 aacagtatgt tggcactcaa tgcaatggta gaaaagaaac ccatcagacg atagtaaacc
     6721 accatgaatg cagcaacgat ggcaaaaccc cataaagtcg aatggaagcc tttttcgatg
     6781 ttctccttac ccaaagacgg accgatggta cgttcttcga caatctgcat cggcgcggca
     6841 agagaaccgg cacgcaacag caaagacgta tcattggctt cggctgtcgt catgcttccg
     6901 gaaatttcca cgcgtccgcc ggtaatggca gtacggataa ccggcgcggt tacaacctcg
     6961 gattttcctt ggtcgatcaa aaccatcgcc atgcgtttgc cgacatttgc ggcagtcagt
     7021 tcgccaaaaa tgctgccacc cgcgctgtcc aagctcagac tgacggcagg tgcgcccatt
     7081 tggtcgaaac tcggttgcgc atcgttgatg ttgtcgcccg tcagctcgac ctgtttgctg
     7141 attagcagag tttcgggacg atctccgccg cttgaaagca gctcataacc gctcggcacg
     7201 ttgccttcca atgcctcgcg caacttggca ggatcgtcct ccaccatacg caattccaaa
     7261 gtcgcggtac ggccgatgat gtcttttgcc ttggcagtat cctgaacgcc cggaagctgc
     7321 acgacgatac ggtcggcacc ggactgctgg atgacgggtt cggccacgcc caactcgttc
     7381 acacggttgt gcagggtagt gatgttctgt ttgaccgcat cggaacgcac tttattgacc
     7441 gcctcttccg aaagcgtcaa gacgatattg ctgccgtctg aattcagcgt tgcttcagga
     7501 aacagcttgc gcaactgcgg cagagccttt tgcacatcac ctgcatcctg caaagggacg
     7561 gtcaggctgt ttccagcctg acgcaccgtg ccgctgcgga ttttttcgcg gcgcagttcg
     7621 cggcggatgt cgcccgaata acgttcaaac gttttctgca tcgccgcttt catatcgacc
     7681 tgcatggtga aatgcacgcc gccgcgcaag tccaaaccca aaaacatcgg attggctttg
     7741 attttcgcca tccattcggg gctgtccgcc aacaggttga gcgcggtaat atacccttcg
     7801 cccaaagtgt tttcgatgac gtcgcgcgct ttaagctgcg tttcggtgtc tttgaaacgc
     7861 actttcagtg aattgtccac aacaaacatc ccgtcggtct gaatacccgc gttttgcagc
     7921 gcggcatcca ctttgaattg agtctgttcg ttgatgatga tggcttgtcg gttggtcgat
     7981 acctgcacgg cgggtgtttc gccgaatagg ttgggcagcg aatacactgc ggcaaccgca
     8041 atcgtgaaca caatcagcag atatttccat aaaggataac ggttcatcat tgttccttaa
     8101 tggttggaac cccacccttt cggtggtgtc ggaatcgggc tatttcagaa gaggcaaaaa
     8161 cccttcccag ccaggcaaga ccggaaggcg gcatcttgaa tatgccgccc tgcgtgtcgg
     8221 aacatggtca agccttcggt tggaattcaa aacaaagtgc cgcattcggg cttttccgat
     8281 gcggcttgtc ggcacaaatc aatcgacttt tgcagaaatc gcattgcgtt ccacttcgac
     8341 ctcgattttt gtaccctgtc cgatatccac ggtaaaaaac tgttcgccga ctctggttac
     8401 cttacccttg aaacctgccg ccaagaccac tttgtcgccg actttcaagg cggcaagcat
     8461 tgcctgatgc gctttgaatt tcttttgctg cggacgcatg atcaggaagt agaacaccac
     8521 cataatcaac actaaaggag caaattgtgc aacagcttga ttcataattt atccgttctt
     8581 tctaatatgg ttgaaaatcg agaggggtat ataataacat aagaccgtaa acaatatatc
     8641 gggtttgccg tccgtaccga ccgtataccg cagcctgccc gtccacaaac ccatgtcctt
     8701 gacccgccta atcttgaaat tctatgcact gttgcgcctt tttttgggca aaaacgcccg
     8761 caccgcatgg atttcgcatc ccgcctgtgc cgggcacgaa cccggcgcaa accatcccga
     8821 ttcgcccgac cgcatcctct gcatcgagca ggcattgcgc cgcgccggta tttggcagca
     8881 cctccaaacc atagaggcgg aagaaatcag cgatacgcgc ctcgcacttg tccactcgag
     8941 caaatatctg aaccgtttgg aatcttgcca gccccaaaaa ggcaagattt tccgcctgga
     9001 tgacgacact gcaatcagca caggctcgct gtctgccgca cgctttgccg ccggttcggc
     9061 agttcaggca gtcgacatgg tcatgaaccg caaagcatgg catgcctttt gcgccgcccg
     9121 cccgcccgga caccatgcgg gcagcggcaa agccggcgga ttctgcctgc tgaacaacgt
     9181 tgccgccggc gtcatgcatg ccattgccga ataccgcctg aaacgcattg ccgtcatcga
     9241 tttcgatgtc cactacggcg acggtacggc agaaatattc aaagacgatc cgcgcatcct
     9301 gtttttcaac ctgtttgaaa ccgacctttt ccccttcccc gaaaacaacg atatgcccga
     9361 cggcggcaat atggtgcacc tgcccttgcc gccgggaacg ggcagccgca cattccgcga
     9421 agccgtccgc aggcagtggc tgccccgact tgccgcattc aaacccgaac tggtgctgct
     9481 atcggcagga ttcgacgcac accgtctaga cgaatcgggc aggctcaacc tgcacgaggc
     9541 ggattttgcc tggctgacac acaaaatcat tcagacggca tcgggctgcc ccggcaaaat
     9601 cgtatccgta ctcgaaggcg gctacaccct tgaacctctg gcacaatctg ctgccgagca
     9661 tatccgcgtg ctggcagggc tgggcaaatc cgatgccgca accgcctatc agaaaacact
     9721 ggacccaaca aaaaaacggt ttgccaaacc gaaaaccgga caggtgcgcc aacctaccca
     9781 atccgaccgt tac
//
LOCUS       DAXHRP010000069         9475 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.069, whole genome shotgun sequence.
ACCESSION   DAXHRP010000069 DAXHRP010000000
VERSION     DAXHRP010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.069"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            388..870
                     /locus_tag="ACFM72_001198"
     CDS             388..870
                     /locus_tag="ACFM72_001198"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC6257765.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDSELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            957..1769
                     /gene="hpnC"
                     /locus_tag="ACFM72_001199"
     CDS             957..1769
                     /gene="hpnC"
                     /locus_tag="ACFM72_001199"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HFC6257766.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYGNFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRCAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(1840..2310)
                     /locus_tag="ACFM72_001200"
     CDS             complement(1840..2310)
                     /locus_tag="ACFM72_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HFC6257767.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            2401..4242
                     /locus_tag="ACFM72_001201"
     CDS             2401..4242
                     /locus_tag="ACFM72_001201"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HFC6257768.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGRPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGVLPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPRAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            complement(4427..5415)
                     /locus_tag="ACFM72_001202"
                     /pseudo
     CDS             complement(4427..5415)
                     /locus_tag="ACFM72_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(5543..6793)
                     /gene="glyA"
                     /locus_tag="ACFM72_001203"
     CDS             complement(5543..6793)
                     /gene="glyA"
                     /locus_tag="ACFM72_001203"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HFC6257769.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVRKQVTALCNKYPVYGA"
     gene            complement(6948..7211)
                     /locus_tag="ACFM72_001204"
     CDS             complement(6948..7211)
                     /locus_tag="ACFM72_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257770.1"
                     /translation="MSNQTKIQAIKQASEQIFAICETPNTALQAIHLILRHGGAGELS
                     WQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDALPLGSLALT"
     gene            complement(7274..9049)
                     /gene="ggt"
                     /locus_tag="ACFM72_001205"
     CDS             complement(7274..9049)
                     /gene="ggt"
                     /locus_tag="ACFM72_001205"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HFC6257771.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(9217..>9475)
                     /locus_tag="ACFM72_001206"
     CDS             complement(9217..>9475)
                     /locus_tag="ACFM72_001206"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HFC6257772.1"
                     /translation="RHAPVSPMWIFSACSRGADPIGRPFAFVNILENPEIRSTLPLIA
                     SRPTFPQLWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
BASE COUNT         2125 a         2206 c         2577 g         2567 t
ORIGIN      
        1 ctgaatttgc gtaattatgc actatggaat aagggattgc aatgtcgtac agatgggaaa
       61 aaggtttgaa tgaaaagttt tctggcgggc ggattgataa atcctgtaaa acggttttgc
      121 tgttaaaaat tcgataggga taaatattat agagattaat ataatttcag tatcttgtat
      181 gatttattaa ggcggattgg gaaagtcggc agacaggtcg gaatggtttt aataatgttg
      241 taaaaaagtt acatcgcaat aaaataacaa aaatttacat tgaaatatgt gctgtacagt
      301 ttatgaacag gttaacggta atcggccggc gcggcggttg tgttagaatg cgcctgtaat
      361 caatctgctg ttcctgaaag gacaaatatg gctatcgtga agaattccgt ggtttcgctg
      421 cattatgaga tgtatgatgc caacaatcag cttttggaca aaaccgaaga accgattgcg
      481 tatctgcacg gcggttacga cggcattttc cctttggtgg aagaggcgtt gcacggtaag
      541 gatgccggcg atacggtcga tgtggcgctt tcgcccgacg atgcgttcgg cgagcaggat
      601 tcggagttgg ttcgtattga agatgtgggc gtgttccctg ttgaagtcga agtcggcatg
      661 atgtttgaag ccgacgatcc tgaaaccggc gatgttgtcg tctatcgtgt aaccgatgtt
      721 gccgacggca aggcggtggt ggacggcaac catcctttgg caggcatgaa aatccgtttt
      781 aaggctacgg ttgaaagcgt gcgcgatgca tccgatgagg aaatcgcaca cggtcatgtc
      841 cacggcccgc acggtcatca ccaccactga ttgccggcag cttggaggta tctgatgccg
      901 tctgaaaagg gtttgttccg tttcagacgg cattttgttt gatggatgga gaaggtatgt
      961 cggttgggca ttatgaaaat tttcccgtcg gttcgctgat tttgccgcgc aggttgagga
     1021 agccggttca tgcggtgtat gcgtttgcac ggacggcgga cgatatggcg gacgagggca
     1081 gtatgccgtc tgaagccagg ttggcggggt tggagggttt gcggcgcgag ttggacgtgt
     1141 tggcatcggg cggccggtcg gcgcatcctt tgattgcacg attggatgcc gaggcggttg
     1201 tgccgttcgg tttggatttg cagccgtttt atgatttgct ttctgcattt tctcaggatg
     1261 tggttaaaac aaggtatgga aatttcggcg agctggccga ttattgccga cgttctgcca
     1321 atcctgtcgg acgcattatg ctggctttgt acgggaaaac ggatgcggtg tgcgtggcgc
     1381 aaagcgacgg catctgtacg gctttgcaac tggtgaattt ttggcaggat gtggctgtgg
     1441 attggcaaaa gggcagggtt tatattccgc aggacgattt gttgaaattc ggtgtttccg
     1501 aaggacagat tgcggagggt agggcggatg cggcgtttca gcggctgatg gcgtatgagt
     1561 gccggtgcgc atttcgtatg ctgaaggcgg gttcgccttt agcgcgcgaa ttgaaagggc
     1621 gtatcggttt ggaactccgt atgattgtgt tgggggcgca gttgattttg cagaaactgg
     1681 acgcgtgccg atacgatgtg tttgcacaac gccccgtttt ggataagaag gattggttga
     1741 ttatgctgaa acgcgcgttg tggaaatgat gggggaaatg catgccgtct gaaaggggtt
     1801 gttccgcttc agacggcatt ttgcaggcgg ttggtatggt caggcgattt catgtgggtt
     1861 caacctggct tgatcttctg cacccaagcc gatgagtttg cgcagtcggg tcatgtagaa
     1921 attgacatcc aaaccggtgc cgtagcgttg cgccgtccac agtgtttccg ccagtgcctc
     1981 catcatttcg tgttcggctt ccagccagcc gcgtttggcg cacagggtgt cgtggattgc
     2041 gcgtatgccg tgcggctggt ctatgcccgc ctgttcttgg acggacaaat gcagcgacat
     2101 atgcaggaag gggttgcttt cgccgttttc gggtagccag tcggtgtcca gatggtcttc
     2161 gatgcgttcg agataacggt ggtattcggg atgggcttcg ataatgcgga gggctttctg
     2221 ttccagtgcg ctcagttgca gcggattgag ccgctgctgc cacacgcggg cgaaaaagcg
     2281 gcggacatcg tgggtattga catcgtacat ggcgggttcg ataagatgtt tatggaaata
     2341 ggttcggata atggcgggtt ttacataaat taaatcccac cgtcaacctt accatttata
     2401 atgcagacaa attatttgtc tgaaacggat tcgattatga aaaaactgat ttgcctgttc
     2461 gccgtatttt tgatgttgtg cggacgagct ttcgcgctgg atgcgaacga tctgctgccg
     2521 ccggaaaagg cattcgtgcc ggagcttgcc gttgccgacg acggtgtgaa cgtccgtttc
     2581 aggattgccg acggatacta tatgtatcag gcgaaaatcg tcggcaagac cgatccggcg
     2641 gatttgttgg gacggccttc tttcagcaag ggtgaagaga aggaagacga gtttttcggc
     2701 aggcagacgg tttaccatca cgaagcgcag gttgcctttc cttatgcaaa ggctgtcggc
     2761 gaaccgtata aattggtttt gacctatcag ggctgtgccg aagccggcgt gtgctatccg
     2821 cccgtggata ccgagtttga tatttccggc aacggcactt accatccgca aaccgacgaa
     2881 ccggcatccg ccaaagaccg ctttttgcag ccttcctctc aaaacggcag cggggtgctg
     2941 ccgcccccga agggggatga gggcggcgac agccgtttca agctgtcttg ggatacgctc
     3001 aacgccaatc ttttggcgtt ttttctcgcc ggtttgggtc tgagttttac cgcctgtatg
     3061 tatcccctgt tgccgattgt ttccagtatt gtggtcggcg acaaaaaggc gggcaaggcg
     3121 cgggcgtttg tgctgtccgt cgtttatgtt cagggtttgg ctctgactta tacgctggtc
     3181 ggcattgttg ccggactgac gggcgcactg ctgaccgtat ggttgcagca ggcttgggtg
     3241 gtgttggcgg catcggcttt aatggtcgtc ttggcactgt ctatgttcgg gctgttcaac
     3301 atccagcttc ccaacgccgt gcagtcgtat tttcagaatc aaagcagcag gctttcaggc
     3361 ggtaaaatcg tttccgtctt tattatgggc atattgtccg cgctgattgt cgggccgtgc
     3421 gtcgccccgc cgctggcatt tgctttgggc tacatcggtc agacgggcga tgcggtttta
     3481 ggcggtttgg cactttacac tttggcgttg ggcaccggcg ttccgctgat tgccatcggc
     3541 acgttcggcg ggcatatcct gcctagggca ggcgattgga tgaatgccgt caaatacgct
     3601 ttcggcttta tcctgcttgc cgtcgccgtt tacctcgcca cgccgcactt gccctattat
     3661 ctcgtcgtcg cgctgtacac gctgctgatg ctggttcctg cctgtatgct gctggtcaac
     3721 ggacgcaggc agaaacgccg tccgaaagct gtggcattcg cattgggcgg catattgctg
     3781 ataggcggcg cgtggttcgg ctggcagggc gcaaacggca aaacgaccgc gctgcaccat
     3841 ttcctgaccc tcaatccgcc ggccgaagca ggcaaatctt cggaacacgg aaaaatgttt
     3901 gccgatactg ccgcgctgaa ggcagcgatg gatacggcgt tgaaagaaca tcccgacaaa
     3961 cccgtcgttt tggattttta tgccgactgg tgcatttcct gcaaagaaat ggcggcttac
     4021 acgctcaatc agccggaagt gcatcaggca gtcgatatgg aacgcttttt ccaaatcgac
     4081 gtaaccgcca acacgcccga acatcaggcg ttgttgaaag aatacggtct gttcggaccg
     4141 ccgggcgtgt ttgtcgtccg ctccgacggc agccgcagcg agccgctgct gggttttgtc
     4201 aaagcagaca agtttatcga gtggtatgaa caaaaccgct gattccgatg tttcaaatgc
     4261 cgtctgaagt tctcagacgg agacctttgc aaaactcctt tccctcccga cagccgaaac
     4321 cccaacacag gttttcggct gttttcgccc caaatacctc ctaattctac ccaaataccc
     4381 ccttaatcct ccccggatac ccgataatca ggcatccggt cgccttttag gcggcagcgg
     4441 gcgcacttag cctgttggcg gctttcaaca ggttcaaaca catcgccttc agatggcttt
     4501 gcgcactcac tttaatcagt ccgaaatagg ctgcccgcgc atagcggaac ttacggtgta
     4561 acgtaccgaa gctttgttcg accacataac ggttgcgttt ggtttgcgtt tccgacagcg
     4621 gacggttgcg gcaggctttg cgcataatgc cgtctaacaa ctgacgctct tccagatgtt
     4681 gccggttttc cgcactgtca tagcctttgt cggcatagac ggtcgtacct tcgggcagtc
     4741 cttccaacaa cggcgacagg tgtttgcact cattggcatt ggcgggggta atgtgcagtt
     4801 tctcgatata gccttctgca tcggtacggg tatgttgttt gtaaccgagt ttgtagaggc
     4861 cgtttttctt tatccaacgg gcatctttgt ccttactcgg tgtggtttga ccgctgattt
     4921 gtccttcttc gtcaacttct atggcctgac gctgtttgct gccggcggtc tgaataatgg
     4981 tggcgtcaac gacggcagcg gatgctttct ctatttttaa acctttttcg gtcagttggc
     5041 ggttaatcag ttccaacagt tcagacaggg tattgtcttg cgccagccgg ttgcggtagc
     5101 ggcataaggt gctgtaatcg gggatgctca gttcgtcgaa acggcaaaac aggttgaaat
     5161 cgatgcgggt aatgaggctg tgttcgagtt cgggatcgga gagactgtgc cattgtccga
     5221 gcaggacggc tttgaacatg gacaacaggg gataggcggg acggccgcgg taatctctga
     5281 ggtaacgggt ttttgacggt tcaggtatgg ttcgatcggc tgccaatcaa tcacccggtc
     5341 caacttcaat agcgggaaac ggtcgatgtg tttggcaatt atggcttgtg cggtttgccg
     5401 gaagaaggtg ctcatgagaa atcccctaaa tgtcttggtg ggaatttagg ggattttggg
     5461 gatttttgca aaggtttccg cctgaaacat tatgagattt caggcggcat tggattgctt
     5521 ggcggaatat ttttaaaaag gcttacgcgc cgtaaacggg gtatttattg cacaaagcag
     5581 ttacttgttt gcggactttg gcgaggttgg cttcgtcttc ggggttagac aatacgtcgg
     5641 caaccaagtt cgccaatacg cgtgcgtcgg cttcgttaaa accgcgtgtg gtcatggcag
     5701 cggagccgat gcggatgccg gaggtaacga agggtttttc cggatcgttc ggaatggcgt
     5761 ttttgttgac ggtgatgtgc gctttgccca aagcggcttc ggcggctttg ccggtaattt
     5821 tcatcggttg caggtcgacg aggaaaacgt ggctttcggt gcggccggaa acgatgcgca
     5881 aaccgcgttt gaccagttct tccgccatgg cggcagcatt gattttcact tgttttgcgt
     5941 attgtttgaa ctcgggttgc aacgcttctt taaacgctac ggctttggcg gcgatgacgt
     6001 gcatcagcgg accgccttgc aggcttggga agatggaaga gttcagtgct ttttcgtggg
     6061 tattgtcgcg gcacaaaatt acgccgccgc gaggaccgcg tagggttttg tgggtggtgg
     6121 tggtcacgaa gtcgcagaat ggcacggggt tgggatattc gccgccggca accagaccgg
     6181 catagtgcgc catatcgaca aagaggtatg cgccgacttt atcggcgatt tcgcggaatt
     6241 ttgcccagtc gatttgcaac gcgtaggcag acgcacccgc cacaatcatt ttgggtttgt
     6301 gttcgagagc caagcgttcc acttcggcat aatcgagcac ttcgttttca tccaaaccat
     6361 aagtaacggc attgtagagt ttgccggaaa tattaacgct cgcgccgtgg gtcaggtggc
     6421 cgccgtgcgc caaagacata cccaaaatgg tgtcgcccgg ttttaaaacg gaagcgtaca
     6481 cggcttggtt ggcttgcgag ccggagtgcg gttgaacgtt ggcgtattgc gcgccgaaca
     6541 gttttttgac gcggtcgatt gccaattgtt cgacaatatc gacgtattcg cagccgccgt
     6601 agtagcgttt gccggggtag ccttcggcgt atttgttggt cagctgggaa ccttgcgctt
     6661 ccattacggc gcagctgacg tagttttcag aggcaatcag ctcgacgtgg tcttgctggc
     6721 gttggtcttc ttgggcaatg gctgctgcca aatcggggtc atattgtgcg agggtaacgc
     6781 tttttgaaaa catgttctcg gctcctttgt gtaatcaggg tatcatgagt gttttttgta
     6841 taaaaaaata cttcaaaacc taaggcagat agtccataat gcgtaaattt tctttggcat
     6901 tatcaggtaa tttatttaac atgctggttt ttagcgtctc attaccttta tgttagtgca
     6961 aggctaccca aaggcaatgc atcaaatggt aaattttcgg cagtttgtgc aaaatcaatc
     7021 aaataaccag caccaaccac atctttatca gccataaccc gctgatacac cacttgccaa
     7081 gacaactctc ctgccccacc atgtcttaaa atcagatgaa tggcttgtaa tgctgtgttt
     7141 ggcgtctcac aaattgcgaa gatctgctca gaagcttgct tgatggcttg tatttttgtt
     7201 tgattactca caatttcccc ctattttaat attaacttaa tgcggtcaaa ttcacaaaat
     7261 acaagcttca cctctaatca cccatcactc gaccttctcg gcgtggatcg gcaccaccaa
     7321 ccagcctgct tggctcgata ataatggctt gaacacctga atttagctca cgcacgtcag
     7381 tcttatagcc caaatcattt aatgcttgtt gccactggag ggcggttgta cccgtttcta
     7441 gttcatagct accaaagcga tttaataaat tgggtgcact gatggcatct tggatatcca
     7501 tattccagtc actatgtgcc acaatcgtct tagcgacata gccaatgata cggctaccac
     7561 ctggggagcc gattgccata taaggcttgc ctgctttaaa tacgatggtt ggtgccattg
     7621 aggagcgtgg tctcttgccg ggctcgacac gattggcgac ctgtttgccc tgctttattg
     7681 gctcaaaact aaagtctgtc agctcattat tcagcaggta gccatttgcc atcaaagttg
     7741 agccaaacgc attttcaatg gaagtcgtca ttgatagcac attgcccgcc ttatccacaa
     7801 ttgatatatg actggtagaa ggtaactcaa tcgcttgtga ggacacccac tcatgaataa
     7861 aatcgcctgc agatacgcta ggcaatgcct tatccgactg ctcaagcagc tggctgcgat
     7921 gttttaggta gtctttagaa atcaactggc gaatgggtac tggtacaaaa tcagggtcgc
     7981 ccaaatatac atcacgatcc gcaaacgcaa gcctagaagc gtcgcccaag agacgtaaac
     8041 cttcagcatc ataccccacc tgattgggtg aaaattcatt taaaatcccc aaaatctgac
     8101 ccacagcaat cccacctgag cttggtgcac ccataccgca tacttcataa atacgataag
     8161 tcacacaaac aggcgggcgt tccaccactt gataatcaga taaatcttgt aaggataatt
     8221 gaccggggtt atccttagca ttttggacaa ctgaaacgat attttgggca tatttaccag
     8281 tatgcagagc ttttgcacct tgagctgcta acgcctgaac actgtcagca aattctaaat
     8341 ttttcagcaa gctgcctgct tgtagcggca caccattcgg caaaaaataa gcggctgttt
     8401 ttggatagcg tgccaaatgc tgctgatttt gctcaaccga gatggcaagc cttggcgaca
     8461 cctcaaagcc ttgttttgcc aagcggatcg gtgtatcaaa taattttccc caaggcaata
     8521 caccgtatcg ctgatgtatt gtctccatca gtttagggat agcaggcgta cccaccgagc
     8581 gaccaccgac caccgcttcc ataaatttca atggttgacc atctttatcc aaaaataatt
     8641 ccggcgtcgc acgcatcggt gccgtctcac gcccatcaaa tgtggtcaat gttttggcgg
     8701 tattatccca atacaacaca aatgcaccac cgcccaagcc tgacgactgt ggctctacca
     8761 agcttagtgt cgtctgcacc gccaccatcg catctgcagc gctaccgcct tgctttaaga
     8821 tatcatagcc agcttgtgtt gctaatggat tggctgacgc taccataaaa tcacttgcaa
     8881 tcacctgctt ttgttcggtc agtcccgttg catgttcagg cgtgtgagcg tctgcacctg
     8941 tgatgacagc agaatgagta ttaaccttac cttgattggc atggatgact tgacatccag
     9001 agattgtcat agacattatc aatgcagtca ataaatatgt tttagccaca agcactcctt
     9061 cgcctgagtt tgattgatga ttcatacaag gcatgctgat tattgtattt aatatggcta
     9121 aataattcaa tccaaactat caatcttgac catcaaaaaa agaccgctaa tgtcatcagc
     9181 agtctttttt gatatttatt ttaagatatt aagtaatcag acctttgggc tatgctcttc
     9241 aatgagtggt tttagctcac ctgattggta catttgtagg ataatatcac taccaccgat
     9301 taactcacca ttaacccaaa gctgtggaaa ggttggccga ctggcgatga gtggtagagt
     9361 actgcgaatt tctgggtttt ctaggatatt aacaaaagca aagggtctgc caattgggtc
     9421 agcacctcta ctgcacgcgc tgaaaatcca cattggggaa actggggcgt gcctt
//
LOCUS       DAXHRP010000070         9382 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.070, whole genome shotgun sequence.
ACCESSION   DAXHRP010000070 DAXHRP010000000
VERSION     DAXHRP010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.070"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            165..944
                     /gene="pgeF"
                     /locus_tag="ACFM72_001207"
     CDS             165..944
                     /gene="pgeF"
                     /locus_tag="ACFM72_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HFC6257773.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVDDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAEALGGTPDADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            996..1475
                     /gene="lptE"
                     /locus_tag="ACFM72_001208"
     CDS             996..1475
                     /gene="lptE"
                     /locus_tag="ACFM72_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HFC6257774.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1477..2475
                     /gene="holA"
                     /locus_tag="ACFM72_001209"
     CDS             1477..2475
                     /gene="holA"
                     /locus_tag="ACFM72_001209"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HFC6257775.1"
                     /translation="MAAHIGHIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVLRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSVQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            2596..3015
                     /locus_tag="ACFM72_001210"
     CDS             2596..3015
                     /locus_tag="ACFM72_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257776.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3091..3606
                     /locus_tag="ACFM72_001211"
     CDS             3091..3606
                     /locus_tag="ACFM72_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC6257777.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHLLGISPKDAFGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3690..4574)
                     /locus_tag="ACFM72_001212"
     CDS             complement(3690..4574)
                     /locus_tag="ACFM72_001212"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HFC6257778.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDTENSRQSLELNSDLVNQLAEINKNLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLVEAVGDINNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIDEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            4853..4999
                     /locus_tag="ACFM72_001213"
     CDS             4853..4999
                     /locus_tag="ACFM72_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257779.1"
                     /translation="MLIHYINFANLSEKQLMRQCLVHVCFLISAIAMAWTDKIVYGTT
                     HKPH"
     gene            complement(5058..5921)
                     /gene="rpoH"
                     /locus_tag="ACFM72_001214"
     CDS             complement(5058..5921)
                     /gene="rpoH"
                     /locus_tag="ACFM72_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HFC6257780.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(6185..7723)
                     /gene="lnt"
                     /locus_tag="ACFM72_001215"
     CDS             complement(6185..7723)
                     /gene="lnt"
                     /locus_tag="ACFM72_001215"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HFC6257781.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAASSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            complement(7792..8518)
                     /locus_tag="ACFM72_001216"
                     /pseudo
     CDS             complement(7792..8518)
                     /locus_tag="ACFM72_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            8712..8993
                     /locus_tag="ACFM72_001217"
     CDS             8712..8993
                     /locus_tag="ACFM72_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257782.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYISWLGLAEPCRFRR"
     gene            8975..>9382
                     /locus_tag="ACFM72_001218"
     CDS             8975..>9382
                     /locus_tag="ACFM72_001218"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HFC6257783.1"
                     /translation="MPISPVMMPPVTGVPNSHLLFDVAFAVVVLSLLIRGMTIPVMAR
                     LLKVAMPNKPEPKDTHDIWLAKKEIVRMSAFKVVAESEAEGHHPDTVEPISDSFGARC
                     FALIRNGIRIEMQSDTVLQAGIWRGTSCPTARSI"
BASE COUNT         2060 a         2315 c         2755 g         2252 t
ORIGIN      
        1 taagggcatc attcccgcac cggcaagaat ccgaacccga acgtttgaaa acaatcccga
       61 atctccgaat tcccgcctgt gcgggaatga cgaaaaaaca aacatccatt tgccccgaag
      121 gcagttaatc aaccctttcc gccacacacc tattccaata tccaatgaaa accatcacag
      181 aaaccctaaa tctcgccccg aaaggcaaaa acttcctgac cgccgattgg cccgcgcccg
      241 ccaatgtgaa aaccctgatt accacgcgca acggcggcgt gagccaaggt gcgtatcaga
      301 gtttgaacct cggtacgcac gtcgacgaca atcccgaagc cgtgcgccgc aaccgcgaaa
      361 tcgtgcaaca gcaggtcgga ttgcccgttg cctacctcaa tcaaatccac agtaccgtcg
      421 tcgtcaatgc tgccgaagcg ttgggaggca cacccgatgc ggacgcttcc gtagacgaca
      481 cgggcaaagt tgcctgtgcc gtgatgaccg cagactgcct gcccgttcta ttttgcgaca
      541 gggcaggtac ggcggttgcc gccgcacacg cgggctggcg cggtttggcg ggcggcgtat
      601 tgcaaaacac cattgctgcg atgaaggttc cgcctgtcga aatgatggcg tatctcggcc
      661 ccgccatcag tgcggatgcg tttgaagtcg gacaggatgt gtttgatgcg ttctgcacgc
      721 ccatgcccga agccgccgcc gcatttgaag gcataggcgg cggcaaattc cttgccgacc
      781 tttacgcgct cgcccgcctg attctgaagc gtgaaggcgt gggcggcgta tatggcggca
      841 cgcattgtac ggttttggaa cgggacactt tcttttccta ccgccgcgac ggagcgacag
      901 ggcgtatggc gagcctgatt tggctggacg gcaatgccgt ctgaacacgc cgctgatata
      961 atctaccgac tttgtgcttt tgagaaaggc aagccatgaa caaactgttt cttactgccg
     1021 cagtgctgat gctgggcgcg tgcggtttcc acctgaaagg tgcagacggc atttctccgc
     1081 cgctgaccta ccggagctgg cacatcgaag gcggacaggc attgcagttt cctttggaaa
     1141 ccgcgctgta tcaggcttcg ggcagggtgg acgatgctgc cggcgcgcag atgaccctgc
     1201 gtatagacag cgtttcccaa aacaaggaaa cctacaccgt tacccgtgcg gcagttatca
     1261 acgaatatct tttaatcttg acggttgaag cgcaggtatt gaaacgcggc gagccggtcg
     1321 gcaaaccgat gaccgtgtcc gtccgccgcg tccttgctta tgccgacaac gagatcttgg
     1381 gcaaacagga agaggaagcg gcattgtggg cggaaatgcg gcaggatgcc gccgaacaga
     1441 ttgtccgccg cctgaccttt ctgaaggcgg aatgacgtgg cggcacatat cggacacatt
     1501 gatacggacg cgcctttgaa acccctgtac gtcatccacg gcgaggaaga actgttgcgt
     1561 atcgaggcat tggacgcatt gagggcggcg gcgaagaaac aaggttacct taatcgggaa
     1621 gtttatacgg cagacaatgc cttcgattgg aacgaactgt tgcaaaccgc aggcagtgcg
     1681 ggtctgtttg ccgatttgaa gctgttggaa ctgcatatcc ccaacggaaa acccggcaaa
     1741 accggcggcg aggcgttgca ggattttgcc gcccgcctgc cggaagatac ggtaacgctg
     1801 gttttgctgc ccaaactgga gaaaacccag ctccagtcca aatggtttgc cgcattggcg
     1861 gcaaaggggg aagtgtggga agccaaaccg gtcggcgcgg cggctttgcc ccaatggata
     1921 cgcggacggc tggacaaaat cggtttgggt atcggggcag acgcattggc actgtttgcc
     1981 gagcgcgtgg aaggcaatct gttggcggcg cgtcaggaaa tcgacaagct cgggctgctg
     2041 tatccgaaag ggcataccgt caatatcgat gaggcgcaaa ccgccgttgc caacgtcgcc
     2101 cgcttcgacg cgttccaact ggcaggcgcg tggatgaagg gcgatgtcct gcgcgtatgc
     2161 aggcttttgg acggattgcg ggaagagggc gaagaaccgg tgctgttgct gtgggcggtt
     2221 gccgaagacg tgcggacgct gatccggctt gctgccgccc tgaagcaggg gcagagtgtc
     2281 caatccgtac gcaacagtct cagactttgg ggtgaaaagc agacgctcgc accgcttgca
     2341 gtcaagcgga tttccgtcgt ccgcctgctt gacgcgctca aaacctgcgc ccaaatcgac
     2401 cgaatcatca aaggtgcgga agacggcgac gcatggacgg tattcaaacg gcttgtcgtg
     2461 tcgctggcgg aataaagcgg taatccccaa aatccgaaaa tactgtaaaa taccgttaat
     2521 cctgaaaagt attcaccaat ccgtccgaaa acatttcaga cggcacgacc acctcaataa
     2581 aggaacatta accctatgga caataagacc aaactgcgct tgggcggcct gattttactg
     2641 actaccgccg ttttaagcct cattatcgta ttgattgtcg actcctggcc gcttgccatc
     2701 ctgcttgccg ccgtcatcgt cgccgccgct gcgggcggtt ttgtttggac atcccgccga
     2761 cagcaacgcc agtttatcga acgcctgaaa aaattcgaca tcgatcccga aaaaggcaga
     2821 atcaacgagg caaacctgcg ccgtatgtac cacagcggcg gacaacacca gaaagatgcg
     2881 attaccctga tctgcctgtc gcaaaaatgt tcggtggacg aggcgcacgc tatgttcaaa
     2941 aaacgcccga cacgtcagga aatcaatcaa atggcggcaa aacagtcgcg cggtcagaaa
     3001 cgtccgcacc gttaaccgcc gcaaggcatc tttgcataaa tgccgtctga agcctgttgg
     3061 cgtttcagac ggcatattct gattgaaaag atgatgacac tgaaaaccgc cccgctcaaa
     3121 cgccgctttg ccgccatgct gtacgaaatg ctgctggtcg gtgcggcaac ctgtttggca
     3181 gcattgtttg ccggtattgc cgccattttt ctgaatcccg tttctatcgc ggtttctgca
     3241 ttggtaacga gtatcctgat aatgggatca tggtggcttt attttcgcgc caactggcac
     3301 ggtcaggggc agaccttggc gatgaggaca tggaaaatcg gcttgtgcga ccttaacggc
     3361 atacagccgt ctttgcacct gctgcgcctg cgctttattt gggcgtgcat attcatcgtc
     3421 ttcattccta tgttagccta tgccggatta cgccacctgc tcggtatttc acccaaggat
     3481 gcattcggtg cggcattgat ttggctgatt ttaccgtggg ggtttgccct gctgaatccc
     3541 gatcggcagt ttctgtatga ttttcttgca ggaacaagat tggtggcggt caaaggaaag
     3601 ccttaagcct ttataccgca aaggtttcaa cctgaaaaaa tgccgtctga aagggctttc
     3661 agacggcatt tggttatcgg ggaaaccgat tattcgatat tctgcacttg ttcccgcatc
     3721 tgctcgatta agactttcag ttcgaccgag gcttgggtgc attcggcggc aatggatttg
     3781 ctgcccaaag tgttggcttc gcggtttaat tcctgcatca ggaaatccaa gcgttttccg
     3841 ctgctgcctt tgtgttcggt aacgatgcgg cgtacttcgt cgatatgcgt gcgcaggcgg
     3901 ctgaattctt cgtcgatgtc ggatttttga ataaagaggg caaattcctg ttgcagcctg
     3961 tcattattga tgtcgccgac tgcttcgacg aggcgggcgc ggattttttc tttatgtgtt
     4021 tccagcaggg taggaaagag ttcgctcaat gcatctatga tttcttccat gctttcgagg
     4081 cgttgtaaca ggtgctcgcc caattttttc ccttcgcgcc ggcgtgcggc agtaaagtct
     4141 tttaacgctt tttcggtcag ttcggtaatg ctttttgcca attcctccgt attttccctt
     4201 tggcttgcca atacgccggg gaaacgcagg atgtcggcaa cgcccagttt tgccaaatcg
     4261 tgatgcttgc ggaggttttt gttgatttcg gcaagctggt tcaccaaatc cgagttgagt
     4321 tccaaggact gtctgctgtt ttccgtatct tgaatttgga ttttgcattc gactttgccg
     4381 cgcgcgatat gggatgaaat tttctcgcgg ataccgcttt ccaaatagcg caaatcatcc
     4441 ggcatcctga tttgaatgtc caaaaagcgg tggttgacgg cgcggatgtc gagattgatg
     4501 cgtttgctgc cgcactctgc cgccgcgttg gcaaatccgg tcatgctgtg gatgtggata
     4561 tttccgctgc tcatgtcgtt ctccgaagcc cgttaaaatg gaatcaatat atcacatctg
     4621 tatggcggca agcgttttcg ggtgtgaaaa attgaagatt ttgcagcggc agattggaat
     4681 cacgcgcttt tgttgctgca aggaagggaa atgtatagtg gattaaccaa aaccagtacg
     4741 gcgttgcctc gccttagctc aaagagaacg attctctaag gtgctgaagc accaagcgaa
     4801 tcggttccgt acgatttgta ctgtctgcgg cttcgccgcc ttgtcctgat ttttgttaat
     4861 ccactatatc aatttcgcca atctgtcgga aaagcagctg atgcggcagt gtctggtgca
     4921 tgtctgcttt ttgatttcgg cgattgcgat ggcttggacg gataaaatcg tgtacggcac
     4981 gacgcacaaa ccgcattgat gtttaccaaa taaaataccc gacaaaacaa tttgtcgggt
     5041 attttattgc gtatatttca aaccgcttcg gcttcttcgg tcaggaaacc acgcagtttc
     5101 tgcatggctt tcgcttcaat ctggcggatg cgctcggcag agacgccgta ttctgcagca
     5161 agctggtgca gcgtcagacc gccgtcatct tgaagccagc ggctttccac aatacggcgg
     5221 ctcctgtcat ccagttgcgc caaagcgttt tgtaaacctt ctgtttgcag ggcgtaatgc
     5281 gcctgtttcg atagttgtcg gctcggttcg gaatcgtggt cggcaagcca gtcgatgggg
     5341 gcgaaactgt cctcgtcgtc gctgttgtct gccatgatgg cgatgtcgtg tcccgtcatg
     5401 cgctgttcca tttccagaac ttcggaaagt ttgacaccca aatcgtcggc gatgtcttgt
     5461 gcctctttgg gagacagggc gttgaggttt ttacgcatac tgcgtaaatt gaaaaacagc
     5521 ttgcgttgcg gtttggtggt ggcaacgcga accaaacgcc agtttctcaa aataaactcg
     5581 tggatttcgg ctttaatcca gtgtacggca aatgaaaaca gacgcgcgcc tcgacctggc
     5641 tcgtagcgtt tgaccgcctt catcagtccg atattgcctt cctgaatcag gtctgcctga
     5701 ttcagcccgt agccgtcata gccgcgcgcg atggaaacga cgacgcgcag gtgggacagg
     5761 atgagttgtt tggcggcgtt gaggtcgccc tttatccggc gttcggcgag gcgggtttct
     5821 tcttcttggg acagcatcgg gatgctgttg acggtgtgga tgtattgttc gaggctgccg
     5881 ttgccgcttt ggatggcggg taatgcgaaa gcgttattca tttggggcat ttcctttcgg
     5941 ctgaaactgc gtatcggcgg tttgctgtgt tgggatgcag tatatcactg cttggcttgt
     6001 attttgtatg tttggcagga gatatgcgct aaggtttgaa agacaggaaa attttgtaag
     6061 gcaagtttga ttgattttgt aaacctgatg gttcaattct atttcagaat tatattacat
     6121 acgtagttgt atgtaaacgg ccggtttgaa aaaagacagc ccgtccggac gggctgtgca
     6181 ggtatcagtg ttctttgttt cggaagatga aaagaatcag tgcggctagg gtcaatatgc
     6241 ccatcaacca ccatgaactg ccggttttca tatagggcgt ttcgccgaca tagcctttga
     6301 tgtgtccttc caatacggtt tccgtatcgg gttgggcttg ggcgatgatg ttgcctttgg
     6361 gggagatgat ggcggttgcg ccggtgttgg tggcgcggac catatagcgt ccgagttcca
     6421 tagcccgtgc ctgcgattgt tggaggtgct ggtacatggc gttggatttt ccgtaccacg
     6481 ccatattgct ggcattggca agcagtgtgg catctttggc ggcggcaatc agttcgtcgc
     6541 cgaatccgtc ttcgtaacag atgttgaagg cgattttttg gtttttcatc agcagggcgg
     6601 attgcttacc gccgcctttg cggaagtcgg aaaggggcat attcatcatt ttgtaaagcg
     6661 gcgtggtcag gaagggcagc ggtttgtatt cgccgaaggg gacgaggtgg tttttggcgt
     6721 agtaggggat gccgtcctga ttgttttcct gataaccggt caggttgatg acggcgtttt
     6781 cgtaaccgtt gccgtccgaa gtgtattggc tgatgccgac ggcgagcgcg ctgccgttgt
     6841 tttgcgcctg ttcggcaaat tttgccagta tgttttccgg caggttttgg cgcataacgg
     6901 ggatggcggt ttcgggcagg atgacgatgt cggcagtggt tttgccgacc tgttcgtaat
     6961 atttctgtat ggtcgggatg acttggtctt cacgccattt gagggtttgg tcgatgttgc
     7021 cttgaagcag ggcgacggtg ctgcggctgc cgtcggggcg ggtgaagtcg gtttgtcggg
     7081 cggtgtagcc tgcggcaagc agggcggcaa tcaggataat tggaagcagg cgtttgcccg
     7141 aacgtgcggt gttatcactc gccaaaacca gccagacacc gagaaaggcg gttgccagtg
     7201 taaccatgtg gatgccgccc aatggggcaa agccggcgag cgggctgtcc ggggtgattt
     7261 gggagtagcc gattgcgccc cagccgaatc cggtcaggaa acgttcgcgg gcaaactcgg
     7321 ttagcgtcca caggatgggc agtaccaaac cgatttttat gccccgaggc agggtaaatt
     7381 ttttccacag ccagaaacac agtgccggat aaagggcaag gtaggcgggg agtaggaagg
     7441 tcagcggtac ggcatagagg tcgggcaggc cggaaacgtc gtgcagggcg gtgtgtatcc
     7501 agtagaactg tgtcgtgtat gcggtcaggc cgaacaggta ggcggaagag gcagcaaaac
     7561 gcggacgcag ttcgatgagg cggacgaagg caccgaaaat caagggcatc agccaaaagt
     7621 ggtagtaggg tgcgaaggta aagggggtgg cggcggcaaa aaggatgagc aaaggccagt
     7681 agagggcggg gtgctgccag tatttgtcca gtttggaaac catattcatc tgtctgttcg
     7741 gaagataccg tctgaacatc tttcaaacgg catcggtatt tgaaaaagaa atcaatgcct
     7801 gccgaaacga ttcatcagcg gcaaggcggg ggcgcaggca atcgaaccgg aaagcagccc
     7861 gacaacgagg ttggcgaagt actccgccca gccagcgtcc cagtgttgcg cgtgcaggaa
     7921 atcgtgcaga aggccgaggt tgtgggcgac cagtacgccg ccgataagaa acatggcaag
     7981 cgtgccgacc acgctcaaac cgcgcataaa gcaaggcata aaggcagtca gcatttgccc
     8041 caaactgcgc gaaaaggttt gtgggcggcg catcagcagc atgcctaagt cgtcgagttt
     8101 gacgatgacg gcaacgattc cgtacaccaa aacagtcatg ccgatgccga ttgccgccat
     8161 tacgagcatg cgcgtcatgt cggtgcagaa acttgtgcag cagcttttct acgccttcaa
     8221 agcacagata aatgccgcct gccgtcaaaa gcggcgtaat gagttgcggc aggaaggcgg
     8281 aaagcagcag ggccgcaggc accaaaaccg gcttgttgga aaaagaacct ttcgccatcg
     8341 accaaacaat cggcaactcg cgttctgccg atacgcccgt aacccggttg gcattgggtg
     8401 ccaaatcgtc gccgaccacg ccggcggttt tctttgcggc ggctttggtc atcagggcaa
     8461 catcgtccaa aacggcggta atgtcgtccg gcagggtaaa tagtgaggca aatgccatta
     8521 aagaatcctg aaatgcggcg caaagtccga cattatatag gagaacgcgg gtttgggcgg
     8581 tttcaggcgg catgaaacag gaaaatgccg tctgaaggcg gtggcggacg tgaagtaaag
     8641 tttcgtgaaa aaaatgccgt gttacagtct ttcgatttta atttaatgaa ttttaaggga
     8701 gaatcgttag cgtggattgg atgggcagtc tgttcctgcc gggtggcgca ctgttgtttc
     8761 tgagcgtggt ttcgaccact ttgtccgcat gtttgggaat gcctttgctg ctggtttctc
     8821 ccgccggcgt gttggacggg gcggcggaag ccttggcgat tgcggcgttc ctgatgttgg
     8881 tcgcgcgtcc gccggcagtg ttcggcggtt tgtggaaatt caattacagc ctgcgtgaaa
     8941 aggcgtatat cagttggttg ggtttggcgg agccgtgccg atttcgccgg tgatgatgcc
     9001 gccggtaacg ggcgttccca attcgcacct gctgtttgat gtggcgtttg ccgtggtggt
     9061 gctgtcgctg ctgattcggg gaatgacgat tcctgtgatg gcgcggctgt tgaaggttgc
     9121 catgcccaac aagcccgaac cgaaagatac gcatgatatt tggctggcga aaaaggaaat
     9181 tgtcagaatg tcggcgttta aagtggttgc cgaatctgaa gcggagggac accatcccga
     9241 tacggtcgaa ccgatttccg attcgtttgg cgcacgctgt ttcgcattga tacgcaacgg
     9301 catccgaatc gaaatgcagt ccgacaccgt gcttcaggcg gggatttggc gtggtacatc
     9361 ctgcccgacg gcaaggtcga ta
//
LOCUS       DAXHRP010000071         9310 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.071, whole genome shotgun sequence.
ACCESSION   DAXHRP010000071 DAXHRP010000000
VERSION     DAXHRP010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.071"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..201)
                     /locus_tag="ACFM72_001219"
     CDS             complement(<1..201)
                     /locus_tag="ACFM72_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC6257784.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMP"
     gene            440..1339
                     /gene="crgA"
                     /locus_tag="ACFM72_001220"
     CDS             440..1339
                     /gene="crgA"
                     /locus_tag="ACFM72_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HFC6257785.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAIP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1566..4781)
                     /gene="carB"
                     /locus_tag="ACFM72_001221"
     CDS             complement(1566..4781)
                     /gene="carB"
                     /locus_tag="ACFM72_001221"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HFC6257786.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECEARPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4810..5451)
                     /locus_tag="ACFM72_001222"
     CDS             complement(4810..5451)
                     /locus_tag="ACFM72_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6037 family protein"
                     /protein_id="HFC6257787.1"
                     /translation="MSIPINFNNLKYLLNDMRNKNRIIEAFPFNYNQRQYAVILTRYK
                     PDEPRPDDYAQAKLEFFNLNSENSIFAYADFYEVHFKSATDFINFFKINVQAGAAKIR
                     EIFQSFSNLFADFIPTQTKKDLDIIYKKIVATRLEPNSPNTIYCYDVRRNGKDKAGKP
                     NRRSVENSEKAKILRPELYEKFKADSNYSFFFSDNPSDEKTDAEIIREVTNRQ"
     gene            complement(6133..6522)
                     /locus_tag="ACFM72_001223"
     CDS             complement(6133..6522)
                     /locus_tag="ACFM72_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HFC6257788.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLAEILRVLQELEKQYAQ"
     gene            complement(7095..7220)
                     /locus_tag="ACFM72_001224"
                     /pseudo
     CDS             complement(7095..7220)
                     /locus_tag="ACFM72_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7266..8399)
                     /gene="carA"
                     /locus_tag="ACFM72_001225"
     CDS             complement(7266..8399)
                     /gene="carA"
                     /locus_tag="ACFM72_001225"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HFC6257789.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMASGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         2101 a         2388 c         2435 g         2386 t
ORIGIN      
        1 cggcatctgc caaatcacag catccatcca aacgaatttt tcgatttctg cctcaacatc
       61 atagccggca tcaatcacgg tttcttgaac attgtgtccg agcgcggtca aaacttcttt
      121 cgcttttttg tgaagcgtgc ggtttaaccc gccgtgagaa tgtccgaacg ccttgccgcc
      181 gtctaataat aaaatattca tttgttacct cgtttgtgaa ttgatgaatg tattgtgccg
      241 ttttacttta taatttaaaa gtgcaaaaat aagaaaacac ttttgcgtca aatgaaataa
      301 tcagatgttc caacacacgg gatggcacat aaagcaccgc cctgtgtgcc gtcctgattc
      361 ggaaggggtt acacccctcc caaataaagt ctgatcctgc cgccctaaag ggcggggttc
      421 caaccgaaaa ggaaacacga tgaaaaccaa ttcagaagaa ctgaccgtat ttgttcaagt
      481 ggtggaaagc ggcagcttca gccgtgcggc ggagcagttg gcgatggcaa attctgccgt
      541 aagccgcatc gtcaaacggc tggaggaaaa gttgggtgtg aacctgctca accgcaccac
      601 gcggcaactc agtctgacgg aagaaggcgc gcaatatttc cgccgcgcgc agagaatcct
      661 gcaagaaatg gcagcggcgg aaaccgaaat gctggcagtg cacgaaatac cgcaaggcgt
      721 gttgcgcgtg gattccgcga taccgatggt gctgcatctg ctggcgccgc tggcagcaaa
      781 attcaacgaa cgctatccgc atatccgact ttcgctcgtt tcttccgaag gctatatcaa
      841 tctgattgaa cgcaaagtcg atattgcctt acgggccgga gaattggacg attccgggct
      901 gcgtgcacgc catctgtttg acagccgctt ccgcgtaatc gccagtcctg aatacctggc
      961 aaaacacggc acgccgcaat ctacagaaga gcttgccggt caccaatgtt taggcttcac
     1021 cgaacccggt tctctaaata catgggcggt tttagatgcg cagggaaatc cctataagat
     1081 ttcaccgcac tttaccgcca gcagcggtga aatcttacgc tcgttgtgcc tttcaggttg
     1141 cggtattgct tgcttatcag attttttggt tgacaacgac atcgctgaag gaaagttaat
     1201 tcccctgctc gccgaacaaa cctccaataa aacgcacccc tttaatgctg tttattacag
     1261 cgataaagcc gtcaacctcc gcttgcgcgt atttttggat tttttagtgg aggaactggg
     1321 aaacaatctc tgtggataat tctataaaaa cctgccataa aattgttttt actcacttaa
     1381 taactttgag aaaaaataaa taagatgatg tatagccggc ggcaatggca gtctatatgg
     1441 ggagcgtgat agggctgttc cttatgtacg gcttgtgtgt ggcaacatcg gctttccaaa
     1501 tgacaaaatg ccgtctgaca ccgtaaaaaa aggtttcaga cggcattttc aacctgattc
     1561 aggcatcagt tgcggttttt caaacgcccg tgcaactctt gaacgctgta cacgcccaga
     1621 tggtctcggc ttttcgcacc ttcgctcatc gcttcgccgc cggcagtggt ggtgtattgc
     1681 ggcacacgtt gctgcaatgc gctttggcgg atgatgtggc tgtcggacac ggattgcgga
     1741 tcgctggaaa cggtgttcac gaccagtgcg atttcgccgt ttttcagcgc gtcgccgatg
     1801 tgcgggcggc cttcggggac tttgttgatg gtctgcacaa tcagcccgtg ttcggtcagg
     1861 tattgcgccg tgccgcgcgt ggcgcagatg ccgtagccta aggcttggaa gtttttagcg
     1921 gttttgatga cgcgttcttt gtcttcttcg cgcacggaga ggaagatttt gccggtcggg
     1981 ttgaggcgtt cgcccgcgcc gagttgggct ttgtagtagg cttcgccaaa gcttgcgccc
     2041 acgcccatca cttcgccggt ggagcgcatt tccggtccca aaatcgtatc cacgcccggg
     2101 aatttgatga aggggaacac ggcctcttta acggcataga aatcggggac gacttctttt
     2161 tccacgcctt gttctttcag ggaaatgcct gccatgcagc gcgcgccgac tttggcgagc
     2221 ggcacgccgg tggctttgga gacgaagggc acggtgcggc tggcgcgcgg gttcacttcc
     2281 aatacgaaca ccacgccgtc ttgtacggca aactgcacgt tcatcagtcc gaccacgccc
     2341 agcgcgtacg ccatcgcttt ggtttggcgg cggatttcgt cttggatttc ttcgcttaag
     2401 gagtagggcg gcagcgagca gccggagtcg ccggagtgga tgcccgcctg ttcgacgtgc
     2461 tgcataatgc cgccgataac cacgtctttg ccgtctgaaa cgcagtccac atcgacttca
     2521 atcgcgttgt tgaggaagaa atcgagcaac acggggctgt cttcggaaac ctgcacggct
     2581 tcgcgcatat atttttgcaa ctgctcggca gagtgaacaa tctgcatggc gcggccgccc
     2641 aaaacataag acgggcgcac gaccagcgga tagccgattt cttcggcttt gacgagtgct
     2701 tcttcttcgt tgtgggcgat gcggttgggc ggttggcgca gacctaagtc gttcaacact
     2761 ttttggaagc gttcgcggtc ttcggcggcg tcgatgctgt cggcggatgt gccgatgatg
     2821 tttacgccgt tttcaaccag cgcgttggcg agtttgagcg gggtttgacc gccgtaatgc
     2881 acaatcacgc cccacgggtt ttcggtgcgg acgatttcta acacgtcttc cagcgtcagc
     2941 ggctcgaaat acaggcgatc gctggtgtcg aagtcggtgg acacggtttc ggggttgcag
     3001 ttgaccataa tcgtttcaaa gcctgattcg cgcagggcga gcgcggcgtg aacgcagcag
     3061 tagtcaaact cgatgccctg accgatgcgg ttcgggccgc caccgagaat catcactttt
     3121 ttacggtcgg aaggacgcgc ttcgcattct tcttcgtaag tggaatagag gtaggcggtt
     3181 tcggtggcga actcggcagc gcaggtgtcg acgcgtttgt aaaccggatg cagcttcagc
     3241 gcgtagcggt gttcgcgaac ttctttttcg cttacgttca acaattgtgc caaacgtttg
     3301 tcggagaagc ctttgcgttt cagacggcgt agggcggcga aatccaaatc actcaaaatg
     3361 ccgtctgaaa ccgctttttc ttccttcatc aagtcttcga tttgcgccag gaaccaaggg
     3421 tcgatggcgc agatttcgtg gatttcttcc agcgtgaagc ccgcgcggaa cgcgtctgcc
     3481 acaaacagca tacgttcggg gccggggttt gccagttcgc ggcggatttc cgctttgtcg
     3541 gagcttctcg gattgaagcc gcacaagcct gtttccaagc cgcgcagggc tttttggaag
     3601 ctttcctgaa tcgtgcggcc catcgccatc acttcgccca cggatttcat ctgcgtggtc
     3661 aggcggtcgt ctgcggcagg gaatttttca aatgcgaaac gcgggatttt ggttaccaca
     3721 tagtcgatgg aaggctcgaa cgacgcgggg gttttgccgc cggtgatgtc gttgcgcaac
     3781 tcgtccagcg taaagccgac cgccagtttt gccgccacct tcgcaatcgg gaagcccgtc
     3841 gctttggaag ccagcgcgga cgaacggctc acgcgcgggt tcatctcaat cacaatcatc
     3901 tcgccgtttt cagggttcac cgcaaactgc acgtttgagc cacccgtgtc cacgccgatt
     3961 tcgcgcaata ctgccaacga agcattacgc atgatttggt attctttgtc tgtcaatgtt
     4021 tgcgccggcg caaccgtaat cgagtcgccc gtatgcacgc ccatcgggtc gaagttttca
     4081 atcgagcaga tgatgatgca gttgtcgttc ttatcgcgca ccacttccat ctcgtactct
     4141 ttccagccga gaacggactg ctcaatcaac agctcgtgcg tgggcgacgc atcgaaaccg
     4201 cgttcgcaaa tcgccaaaaa ctcgtcttta ttgtaggcaa tgccgccgcc cgaaccgccc
     4261 atggtgaaag aaggacgaat cagggtaggg aagccgacct gttcttgcgc cgccaaagct
     4321 tcgttcatcg tgtggcagac aaaagatttc gggcaggaga ggccgatttt ctccatcgcc
     4381 tccttaaagc ggccacggtc ttctgctttg tcgatggcgt cttcggtcgc gccgatcagc
     4441 tcgacattgt atttcgccag cacgccgttg cgcgccaaat ccagcgcaca gttcagcgca
     4501 gtctgaccac ccatggtagg cagaatcgcg tcaggacgct ctttggcaat aattttttcc
     4561 accgtctgcc acataatcgg ctcgatgtag gtaacatccg ccatttcggg gtcggtcata
     4621 atcgtggcgg ggttggaatt caccaaaatg actttatagc cttcttcacg caaggctttg
     4681 caggcctgtg cgcccgaata gtcaaattcg caggcctgac cgataacgat agggccggcg
     4741 ccgatgataa ggatggattt taggtcggta cgtttgggca tggtgggtct ttcttttgaa
     4801 gaatttggat tattgacgat tggtaacttc tctaattatt tctgcatctg ttttttcatc
     4861 gcttggatta tctgaaaaga aaaaactgta attactatcg gctttaaatt tttcgtatag
     4921 ctctgggcgc aaaatttttg ctttttcact attttccacg ctcctgcgat taggcttgcc
     4981 agccttatct ttcccatttc tacggacatc atagcaataa atagtgttag gagaattagg
     5041 ttctaaacga gtagctacaa tctttttata aattatgtct aaatcttttt tagtttgtgt
     5101 tggaatgaaa tctgcaaaaa gattactaaa actctgaaaa atttctctga ttttcgcagc
     5161 accagcctga acattaattt taaaaaaatt aataaaatca gtagcacttt taaaatgaac
     5221 ttcataaaaa tcagcatacg caaatattga attttcacta ttcaaattaa aaaactctaa
     5281 ttttgcttgt gcataatcat ctggtctagg ttcatcaggt ttatacctag tcaaaataac
     5341 ggcgtattgc ctttgattat aattaaaagg aaatgcttca attattctat ttttgtttct
     5401 catatcatta agcaaatact ttaaattatt gaaattaata ggtattgaca tatttaaact
     5461 cctgcgaata tgttgcaata aacgtagcaa gcgtaggttg ggttgaaaac ccaacacaaa
     5521 ccgcttaatt gtctaaaatg ttgggtttgc taaaacctaa cttgtatatc gaaacccccg
     5581 tatcgtagca agccgtagcc cgtatgtagg gtatgtgcgg tacgtatgca cgcgttctcc
     5641 attttccctg caaccccaac ccaccgcgtg cgtgccttgc ggcacactct ctgccgatga
     5701 gttcaaaggt cgtctgaaaa aacgttcgcg gcgtttgttc cacctgcctt gcgataaagg
     5761 ctgcctgaaa aattcccgct gttgatattt cgggcattct ttctcaaacc gcctgcaacc
     5821 gcaaaatccg ctgcaacctg ccccctcccc cgtgggggag ggctggggag atggaattct
     5881 ccgaatttcg gcaaccttcc ccaatgcctt caccgcctaa atacaagcct tgcggcttgt
     5941 tgccctctct ctaacgcttt cccacaggga gagaggacgg ggcggctgtt ggaattaagg
     6001 gttctgcagg aaaaacaggt tgtgcgggct gttttttgtt tttcagacgg tcttctaaac
     6061 gctcaattca agcagcctgt accctacctg tatcctataa ttttcaaaac tctaatcaaa
     6121 attaaccgtt tgttattgcg catactgctt ttccaattcc tgcaatacgc gcaggatttc
     6181 cgccagtaca tcgtttgtct gctgtaaaat ctcgtgattc caaaaccgca gtacggtaaa
     6241 gcccaagctg ttgagatatg ccgtccgcgc gtggtcgtat gcggcttgtt ctgtgtgctg
     6301 ccctccgtct gcttcgacaa tcaacttggg cgttacgcac ataaaatcaa caatataatt
     6361 ccccatcggc tgctggcggc ggaatttata gccgttcaga cgacctgccc gcaggtgctg
     6421 ccacaatttt gcttccgccc cgctcatttc ttggcgcatg gctttggcgc gttggcgcaa
     6481 gatggggttg tcggtggtca agagtttctc gtgcgggttc attttgttgt cgtgctgttt
     6541 gctgccctct ctctaactct ctcccacggg gagagaggac ggggcggttg ttggggttaa
     6601 aggggctgta aggaaaacaa gtcgttcagg ccacttttta cttttcagac gacctgcaat
     6661 caacggttgt aaatccaagt tgcttttcaa accgcctgta accgcaaaac ttgctgcaac
     6721 ctaccccctc ccccgtgggg gagggctggg gagagggcat tcttcgaatt tcggcaacct
     6781 tccccaacac cctagccgcc caaacacaag ccttgctgtt tgttgccctc tctctaacgc
     6841 tttcccacag ggagacagga cggggcggct gtagtgatta agggttttgc aaggaaaaca
     6901 aggaaaacaa gttgtacagg ctgtttttta tttttcaagc gacctgaaat caacgcttgt
     6961 aaatccaagt cgcttttcaa actgcctgca accgcaaaat ctgctgcaac ctaccccctc
     7021 ccccgtgggg gagggctggg gagagggcat tttccaagtt gcggcaatct ttcccaaatc
     7081 ccttagtctt ctaaaataca agccttacgg ttgttgccaa atgaaacttc ttccataccc
     7141 aaaacttgcg tgtaaaacgc aatggttcgg tcaatgtcgg caacggtcag taccagatgg
     7201 tcgagtgcgc taatcttcat ttcccgcttt ctttttcagg cggcggcagt gccgtctgaa
     7261 agccattatg cccgttttgc cgctttcata ttgccaatga atttgtcaaa caaatagccg
     7321 acatcttgcg gaccggggct ggcttcgggg tggccttgga agcagaacac aggtttgtcg
     7381 gtcagctcga tgccttgcaa agtgttgtca aacaaggatt tgtgggtaat gcgtgcgtta
     7441 gcgggcaggg tgtcggcatc aacggcaaaa ccgtggtttt ggctggtgat gacgactttg
     7501 ccgctgtcca aatcttgcac agggtggttc gcaccgtggt ggctgaagcg cattttcagg
     7561 gttttcgcgc cgatagcgag gctgatgagc tggtgtccca agcagatgcc gaaaatcggt
     7621 ttgccgcttg ccatcagttt ttgcacggct tcgatggcgt aggtgcaagg ctcggggtcg
     7681 ccggggccgt tggacaggaa cacgccgtcg ggattgagtg ccaacacgtc ttgtgcgctc
     7741 gtttgggcgg ggacgacggt caggcggcag ccgcgcgagg cgagcatacg caggatgttg
     7801 gttttcacgc cgaaatcgta ggcgacgacg tggtaaggct gttcgtcagg ggtaacgaaa
     7861 cccttgccca atgcccattc gccttccgtc cattcgtaag tttccgtgca ggaaacttct
     7921 tttgccaagt ctttgccgac catactgccg aacgcggcga tgagttcttg cgctttttcg
     7981 attgtggcat ccgcgccggt cagaatcgcg ccgccttgcg cgcctttttc gcgcaacagc
     8041 gtggtcaggc ggcgggtatc gatgtcggcg atggcgacgg ttttgttgcg taccagatag
     8101 tcgtgcaggc tttcggaggc gcggaagttg ctgtgcaaga gcggcaggtc gcggataatc
     8161 aggccggcgg cataaacgct gcggctttct tcatcttcgg cgttggtgcc ggtgttgccg
     8221 atgtgtgggt aggtgagggt aacgatttgt ttgcagtagg acgggtcggt caggatttcc
     8281 tgatagccgg tcatcgaagt attgaacacg acttcgccgg aagtcgaacc ttcgtaaccg
     8341 attgatgtgc cgtggaatac gctgccgtca gcgaggacga ggagggcggg ggtgctcatg
     8401 atgggaatcc tgtttttaat aaaattcttg acaatgccgt ctgaagggac ttcggcaggg
     8461 ggcatccggt cggaaaaatc cggtcaaaaa aaaacacgcc gcgcaagata gacgcgtaac
     8521 gtgcttttcg ggcaagtgcc tataccctga aagcagcata ttttaagacg aaacataccc
     8581 gatttcaagc gcaaacgcgg caggcgggct gatatgttcg cgcgaaaacg gaaatccgtg
     8641 gcgtaaaacc gcccgctccg cgcccactat gcccgttacg catttcccca cgtccgtccg
     8701 gcgaaactat gggaataccc gaatcgtcag gaatacctga atcgtcagga atacctgaat
     8761 cgtcaggaat acctgaatcg tcaggaatac ctgaatcgtc aggaataccc gaatcgtcag
     8821 gaatacccga atcgtcagaa atacccgaac cgtcattccc gcgcaggcgg gaatccggac
     8881 ctgtcggcac agaaacttat cgggtataac ggtttcttga gattccgcat cctagattcc
     8941 cgcctgcgcg ggaatgacgg cacataagtt tctgtgttga tttgagtcta tgggaacggt
     9001 gtaggattgg tggaatcgtt ggaatcggtg ggctgaagcc caccctataa ctcacctttt
     9061 acgaatcctc ctacacccta tacaacacct tgaaaatcca ccttgtcggg aatgcccgaa
     9121 ccgtcagaaa tacccgaatc gtcattcccg cgcaggcggg aatccagacc tgtcggtgca
     9181 gaaacttatc gggcaaaacg gtttcttgag attccgcatc ctagattccc gcctgcgcgg
     9241 gaatgacggc tgcagatgcc caacggtctt tattcctcca tctctaagat ttacagcgat
     9301 acacgggtag
//
LOCUS       DAXHRP010000072         9303 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.072, whole genome shotgun sequence.
ACCESSION   DAXHRP010000072 DAXHRP010000000
VERSION     DAXHRP010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9303
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.072"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            3..353
                     /locus_tag="ACFM72_001226"
     CDS             3..353
                     /locus_tag="ACFM72_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257790.1"
                     /translation="MAVSHHQGYKSAFAKQQAVIDKMERDKAQALLLSAQNYARELEQ
                     ARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKKEIENVLTQDRKNASGGCIDGFGS
                     HGLQLYNRALGYGN"
     gene            250..555
                     /locus_tag="ACFM72_001227"
     CDS             250..555
                     /locus_tag="ACFM72_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257791.1"
                     /translation="MSLLKTVKMQAAVALTALALTACSSTTAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(600..770)
                     /locus_tag="ACFM72_001228"
     CDS             complement(600..770)
                     /locus_tag="ACFM72_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HFC6257792.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            783..1001
                     /locus_tag="ACFM72_001229"
     CDS             783..1001
                     /locus_tag="ACFM72_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257793.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            998..1336
                     /locus_tag="ACFM72_001230"
     CDS             998..1336
                     /locus_tag="ACFM72_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257794.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            1348..1614
                     /locus_tag="ACFM72_001231"
     CDS             1348..1614
                     /locus_tag="ACFM72_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257795.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKADAKADSTNIAAALERIENKLEKVNEKLDRKADKS"
     gene            1611..1808
                     /locus_tag="ACFM72_001232"
     CDS             1611..1808
                     /locus_tag="ACFM72_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257796.1"
                     /translation="MSDPILDALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            1811..2317
                     /locus_tag="ACFM72_001233"
     CDS             1811..2317
                     /locus_tag="ACFM72_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HFC6257797.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLADGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     VEVEKKFG"
     gene            complement(2314..2904)
                     /locus_tag="ACFM72_001234"
     CDS             complement(2314..2904)
                     /locus_tag="ACFM72_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257798.1"
                     /translation="MNWLNRGIQEKILRVLSDNYPNCLKATKVYNSLFPSSSLPITSN
                     IPVDKQGLGLALTLGCEIQSQHLATLQSDEFQYFLKNIYYLEESGLIEITSIDSLHKN
                     FDCKINHKGIDFLTDDGGLSAILGVVTVKLHSDTIQALIAAKIDQAEISDSEKSWLKK
                     ELGKIKDTALSTLTENAINAIPAATLITLLKKFVGL"
     gene            2917..4539
                     /gene="terL"
                     /locus_tag="ACFM72_001235"
     CDS             2917..4539
                     /gene="terL"
                     /locus_tag="ACFM72_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HFC6257799.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTK
                     VTQLFMLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTVLDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWHGIKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYQANKDEMERGAVTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRVTG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFDDEIKSKWSR"
     gene            4539..6107
                     /locus_tag="ACFM72_001236"
     CDS             4539..6107
                     /locus_tag="ACFM72_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HFC6257800.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            6094..7389
                     /locus_tag="ACFM72_001237"
     CDS             6094..7389
                     /locus_tag="ACFM72_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HFC6257801.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDSYPTTAYKAPDGSLYTADKGFGYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLNIDGKPDKEQKIKIRNALSRQLKFAAGVLSKEMQELAGM
                     TRATVWLSDDTLVKQVDSREGQNFDDSYYAFLPDMLQNPEHVIRDNRELIFTARYKGS
                     ALWAVLKYIKEVDEIYLQSYRISNDKEIAKFMAKKKVLK"
     gene            7499..7915
                     /locus_tag="ACFM72_001238"
     CDS             7499..7915
                     /locus_tag="ACFM72_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HFC6257802.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            8146..9207
                     /locus_tag="ACFM72_001239"
     CDS             8146..9207
                     /locus_tag="ACFM72_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HFC6257803.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFDLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAKGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
BASE COUNT         2469 a         2199 c         2548 g         2087 t
ORIGIN      
        1 tcttggctgt gtcgcaccat caaggctaca agtcggcatt tgcgaagcag caggcggtca
       61 tcgacaagat ggagcgcgac aaggcgcaag ccctgctgtt gtcggctcaa aactatgcgc
      121 gcgaactgga acaggcgcgt gcggaagcga aaaaatatga agtcaaggcg cacgctgtcg
      181 gcatggcttt ggcgaaaaaa caggcggaag tcagccgtct gaaaacggaa aataaaaagg
      241 aaatcgaaaa tgtccttact caagaccgta aaaatgcaag cggcggttgc attgacggct
      301 ttggctctca cggcctgcag ctctacaacc gcgccctcgg ctacggaaat taaggttgtc
      361 gaaaaggcag tcatgccgac cccgcctgct gcattgatgg tcgcgccggt acgcccgaat
      421 ccgccgaaag acggcaagac ggccacgctg ttggaacacg ccgctgagtt tggtggctat
      481 gtggcggagt tggaaaatca aaatcaggct tggcgcgact gggcgggcaa tcactcccgc
      541 aaagtcggaa actgacaaaa aagcccgcgt agggcgcggg ctgagggtga aagcggattt
      601 tatacctctt ttacaggggt agcggcggta gtgcttttca gcaaatcgac tgcgtgctga
      661 cagttttgct tgctggtgta gccttcgccc tgagcgatga tttcatggtt ggctgctttc
      721 aaacgccaac ggtattcgcc ttttgcgtct ttatagattt caaaatacat aaggtttctc
      781 ctatgaatga gtacacgttt tcttaccgct ttaacggcaa gtcctggtca ttgagcattt
      841 gggcggacaa ccctgaagaa gccagggcga aatttcgggc tgcacgagaa aatgcgcact
      901 atgacggcga agttgtagca aaggtttata catttgtaaa tatttcgtgg gttaagaaat
      961 tgtacaagcg gacaaaatat ttaatgggta tcaaagaatg acctaccgtg aattagttga
     1021 acgtcagttg gctgtgcgcc atgccgattt ggaattgggc ttaagccgcg cacgcgagca
     1081 agagccgttt gtcattcatg tttccgatct gttggataag gcaggcattg agtacgcggt
     1141 acgcatggat aaggattttc agacgacgtt tcaccttgaa tatccaatta cgaactatga
     1201 cacctttaaa cgtgcggttt ggcaaacttt gggggcgtat tactgtgttt gtaatgatgg
     1261 tgatggactg gagattgcca gcaatcgccc tgacggttac gccgtccgta tcgtattcgg
     1321 cgatgtgccg gtttaaaggg gttttaaatg gactttgaat ttggtttcag aaccctgtgg
     1381 ccgattgcga cggcggcatt ttggttttgg gtcaacggca tttcaggccg cctgaaagag
     1441 gcggacaagc gtatcgacga ccttaaagag gagttgcacg cggtcaagct ctcttatcac
     1501 accaaggcgg acgccaaggc agacagcact aatattgcgg cggccttgga gcgaattgaa
     1561 aacaagttag aaaaagtaaa cgaaaaactg gacaggaaag cagacaaatc atgagcgacc
     1621 cgattttgga tgccttggcg cgtattgaaa acaagactga tcaaacgctg aaaaatcaga
     1681 aggaaatgca ggcggaaatt gcgcaaattc gccaagacac gaaacgcacg gccattacat
     1741 tcggcgcact gggcggcggc gtgattacgg tcggctggga attgcttaaa gcgaaaatgg
     1801 ggctgtaatt atggctcacc cgcaagaaat ccgtgaaaag ttacgccggc tctatgtgag
     1861 cggcgagcaa actttggaaa cggcggcctt gatgtgcgaa atcccgcaga ccactgcgcg
     1921 tgcgtggaaa cgtgcggata aggaaaaagg cgacgactgg gataagatgc gcgccgctta
     1981 cactttggcc gacggcggta ttgaagactt gagccgtgcg atgttggccg gttttatggt
     2041 gcagtacaac agcacgatga cgatgctgca ggattcgagt accgaagatt tgccgccatc
     2101 ggaccgcgcc aagctgttgg ccagcctggc cgatgcgttt acgaaaaccg tatccgccaa
     2161 tgcgcgtgtg atgccggaaa cgtcaaaact ggcgacggct ttggaattga ttgagttctt
     2221 gatggcgttt gtgcaagaaa aacatcccaa acatttgcct gcttttgtgg aggtattgga
     2281 gccgtttggg gtggaagtgg agaagaagtt tggttagagg ccaacaaatt tttttaaaag
     2341 agtaatgagg gtggcggcag ggatagcatt aattgcattt tccgtaagcg tacttaatgc
     2401 agtgtccttg attttcccta attctttttt caaccagctt ttttctgaat cagaaatctc
     2461 tgcttggtct atttttgccg caattaaagc ctgaatagtg tcgctgtgta gtttgactgt
     2521 gacaacacca agaatggcgg ataggccgcc atcatcggta aggaagtcta tgcccttatg
     2581 attaattttg cagtcaaaat ttttatgaag tgaatctatc gaagtaattt caattaaacc
     2641 agattcttct aagtaataaa tattttttaa aaaatattgg aattcatctg attgtaaagt
     2701 tgctaggtgt tgactttgaa tttcacaacc aagagtcaaa gccaagccca atccttgttt
     2761 atcaacaggg atgttagaag taataggtaa agaactacta gggaaaagag agttatacac
     2821 cttggttgct tttaggcagt tcgggtaatt atcacttaaa actcgtaaga ttttttcctg
     2881 aatacctcta tttaaccagt tcataaatta ttcctcatga aaacaaaaga attcctcaaa
     2941 tcccttgccg aactggccgc cagtttgcgc caagtcatcg aagcggaagt ggacggcttc
     3001 gatgcgtcgc ccaaggctat tgctgcacgc cgtgccaagg tgtttgaccc ggtaggcggt
     3061 tacgagtatt tcgtgaatac ctacttcccc cattatatcc gctcgcctga gaaatccgaa
     3121 ctgcatgcgt ttttattcag ccgtctgccg gagattatcc gctcccccaa aggggaaaat
     3181 gaggcggtgg gtgcgccgcg tggagagggt aagtcgacga aggttactca gttgtttatg
     3241 ctgtggtgta ttgtgaccgg ccaaaaacat tatgctgtta ttgtgatgga cagtatcgac
     3301 caggcatatc cgatgctgga agccatcaag gcggaacttg aatttaaccc gcgcttgaaa
     3361 accgactttc cggaagtatg cgggcagggc cgtgtatggc aggccggtac gattgtgacg
     3421 gccaatgacg ttaaagtcca agtggccggt agcggtaaaa agctgcgcgg tttgcgtcac
     3481 ggcccttacc gtcctgactt aactgttttg gacgatattg agaatgacga gcaagtccgc
     3541 aaccccgaac agcgcgacaa gctcaatgcg tggctgacta agaccgtatt gcctctgggc
     3601 ggtgtcggtc agaaatacga tgtgatttat atcggcacga ttttgcatta cgacagcgta
     3661 cttaaccgca ctttgaataa cccgttttgg cacggtatta agtttaaggc gatgaaacgc
     3721 tggcctgacc gcatggattt gtgggacagg tgggaggaac ttttccgaaa cgacggcgag
     3781 acggtggccg aggcgtttta tcaggcaaac aaagacgaga tggagcgcgg cgcggtcact
     3841 tcttgggcgg cgcgtggcgt actcgcgctg atgaaaatcc gtgcgcgtga cggccatgcg
     3901 acgtttgatt cagaatatca aaacgatccg gtcagtggcg aagatgcgcc gtttgccaag
     3961 tcgatgaagt tttggaacga cctgccgtcc gatttggtgt atttcggtgc gctcgacccg
     4021 tcactcggaa aggccggggc gagccgtgac ccgtccgcga ttatcattgg cggttatcaa
     4081 cgtgtaaccg gcaaactgta tgtcgtggag gctcagatta aaaaacgtct ccctgatttg
     4141 attattgagg acgttattcg attgcaccgt caatatcgtt gcaaactgtg gtttgttgag
     4201 actgttcaat ttcaggaatt tctgaaagac gagctggtca agcgcagcgc ggcgcgtgga
     4261 atacctgtcc cagcgcgggc ggtcaaaccg gtatcggaca agctgttgcg gatcgagact
     4321 ttacagcctc acatggcgaa cggtttgatt ctgttgaatg agagccaaca aacgctgata
     4381 cagcagttcc gccattttcc aaaggctgat catgatgatg gtcctgatgc cgtgcatatg
     4441 ctctggtcgg gggcggtggc caattgtgtg ccgatagaat ggcaaagccc taccgataac
     4501 gattttgatg acgagataaa aagtaaatgg agccgataat ggcaaaaaag aacaataaaa
     4561 ctaaaatcca aaagcccgaa gctgcattgc agacggacgt ggctcaaatt acggcgaccg
     4621 gtcgggttat cgccgagcat ccgtccaatt ttattacgcc gcaaaagatg cgggccctct
     4681 tcgaggacgc agaaagcggc gacatccgcg cccaacacga gcttttcgcg gacattgagg
     4741 agcgcgacag cgacatcgcg gcaaatatgg ggacgcgcaa acgcgcgctg ctgacgctca
     4801 actggcgcgt cgccccgccg cgaaatgcga cgcccgaaga agaaaagctg tccgaccaag
     4861 cctacgaaat gatggacagc ctgcctaccc tcgaagacct gattatggat ttgatggacg
     4921 cggtagggca cggattttct gcgttggagg tcgagtgggt attttcagac ggcctttacc
     4981 taccccgaaa ctttatccac cgcccgcaaa gctggttcaa atgggacaaa gacaacgggc
     5041 tgctgctgcg tacccgcgaa aatccggaag gcgaagcgtt gtggccgctg ggctgggtcg
     5101 ttcataccca aaaatcgcgc agcgtccagc aggcgcgcaa cgggcttttc cgcacgcttt
     5161 cctggctgta tatgttcaaa cactacgccg tccacgattt tgccgagttt ttggagctgt
     5221 acggcatgcc catccgtatc ggcaaatacg gcgcgggcgc aaccaaagag gaaaaaaaca
     5281 ccctgcttcg agcggtggcg gaaatcggtc acaacgcggc aggcatcatg ccagaaggta
     5341 tggaaatcga gctgcacaac gctgcaagcg gtacgatggc aaccagcaat ccgtttttgc
     5401 agatggccga ctggtgcgaa aaatcggcgg cgcggctgat tttggggcaa acgctaacca
     5461 gcggtgcgga cggaaaatcc agcaccaacg cgctgggcaa tatccacaac gaggtacgcc
     5521 gcgatttgct ggtgtcggac gcaaaacagg tggcgcaaac catcacaagc caaatcatcg
     5581 gaccgttcct gcaaatcaac tatcccaatg ccgacccaaa ccgcgtgccg aaatttgaat
     5641 ttgacacgcg cgagccgaaa gacatcgcgg tctttgccga cgctatcccg aaactggtgg
     5701 atgtcggcgt acaaatcccc gaaagctggg tgcgcgacaa actggtcatt ccagatgtgc
     5761 aggagggtga ggctgtgttg gtgcggcagg taccggacaa tccgataaac agaactgcat
     5821 tggcggcttt atccgcccac accgtaccat ctaaggctac gggcaggcat caggaaatat
     5881 tggacggcgc gttggatgac gcgctggttg agcccgattt caattctcag ctcaacccga
     5941 tggtgcgtca ggcggttgcc gcacttaatg cttgcaacag ctacgaggag gcagatgccg
     6001 cactgaatgc gctttatccg aatttggaca acgcgaaact gcgtacctat atgcagcagg
     6061 ccttgtttat cagcgatatt ttgggacaag accatgcccg cgcctgattt gggatttgcc
     6121 ttaagtctgc cgccaaaaaa ggcaatcgag tggctggaaa gtaaaaaggt tacggcggag
     6181 agctaccgca atctgacagc ctccgaaatt gccaaagtct atacgattgc ccgcatgacc
     6241 gacttggata tgctcaacga catcaaaact tcgatggttg aatcggcaaa aagtggacag
     6301 tcgtttgacg attggcgaaa aggtatcttg aatctgctcg gcaacaaggg ctggctgcat
     6361 ccgaacgggc ataacggtaa ggatatcatc gacccagcca ccggcgaggt attcggttcg
     6421 ccgcggaggt tggagacgat ttaccgtacc aacatgcaaa ctgcctacaa cgccggtcaa
     6481 tatcaaggat atatggcaaa tattgatgca cggccttatt ggatgtatga cgcggtaggc
     6541 gacagccgca cccgtccggc gcattcggca atagacgggc tggtgtaccg ctacgacgac
     6601 ccgttttggg caacgtttta cccgcccaac ggctacaact gccgctgctc ggtcattgct
     6661 ttatcagagc gcgatgtcga acgtcagggg cggattgtcg ggcaaagcac ggcggacaat
     6721 ctggtcgaga cccataaaat ctacaacaaa aaaggcgaca gctacccgac gactgcctac
     6781 aaagccccgg acggcagcct ctacacagct gacaaaggct tcggctacaa cgccgggcga
     6841 atgaactacc gccccgattt agacaagtac gaccgcgcgt tggcgcatca atttgccaaa
     6901 gcggaaatgg gtggtgcgga ttttaaaacc agctttaaac agcttgaaaa agagttttat
     6961 gaagtcaagc aacgtttgaa tattgatggc aagcccgata aagagcagaa aatcaaaatc
     7021 cgaaacgcgc tatcaagaca gcttaaattt gctgcgggtg tattgagcaa ggaaatgcaa
     7081 gaactggcag gtatgactcg agcgacggtg tggctgtctg atgatacgtt ggttaaacag
     7141 gtagacagcc gtgaggggca gaatttcgat gactcctact atgctttttt gccggatatg
     7201 ctgcaaaacc ctgaacatgt catccgcgac aatcgtgaat tgattttcac agctcgctat
     7261 aaaggctcgg cattgtgggc agttttaaaa tatattaagg aggtggatga gatttatcta
     7321 cagtcgtacc gaatcagcaa cgacaaagag attgccaaat ttatggcgaa gaagaaagta
     7381 ttgaaataga cgttgggcaa ggctcgaatt cacttgcaca cgctctcgta caccctaaag
     7441 ggcaggctgc ggtatcgaga ttatcaccgc ttttccaacg tctataagga atcataccat
     7501 gattgatgtc aaaatagaca atatctttgt cgtcctaaac caaatcgagc ggcttggcaa
     7561 cgggatcgaa aaccgctacc tgctgatgcg ccgactgtcc gaaaccatgc acacggcggt
     7621 caagctcaat ttccgctacg caggccgtcc gaaatggttg gggctaaaat accgcgacgg
     7681 caagccgctt tcggattcgg gtcgtctgaa agacagtttt tccacactgt cagacaacga
     7741 tacagccctt gtcggtacga atatcgtcta tgccgccatc cacaacttcg gcggtatggc
     7801 ggggcgcaac cgcaaagttc ggattccgca acgggaattt ttgacgctga cggacgacga
     7861 caaacaggct ttgatggacg atgtgcagga ttatttttcg ggtctgatac cgtgaattta
     7921 taaaaccctc aaaaacgcgc tttttagcgc gtttttttat gcgggtaata caaacccctg
     7981 cccaagatat aaaaatcaat cctagacgct tctaaaaagc ccctgaaaac gattaattgt
     8041 gtatcgcgcg gacaggtttt aaaaaaatgg cgggagggtt tgaagcacgc ctactctttg
     8101 ttgttttttc aaataggcaa aatgaccgta ttgagagagg tacacatgtc caaaaatgca
     8161 caaaaaaccc tacttgccgt gtgcagtttc gaggtgcagc caaaagacgg gcgaatccaa
     8221 ctgctgccat atggcgaatt tcgcgcagta gacggtcgtc cgactgatgt ccctgcgtgg
     8281 tatctgaccg aagaaaacgg tcatgatgtc gcgttgttgg ccaacagctc gcgcaatcag
     8341 ttggttgtcg attatgaaca ccagacgctc tacaaagaga aaaacggaca acctgcacct
     8401 gccgccggtt ggatgcgttg gctggagttc acgcctaaag gcatgtttgc cgaagtggag
     8461 tggacggaca aggcggctgc ggcaattgcc gcaaaagagt atcgctacat ctctgctgtg
     8521 ttttcctatg acacaaaggg atatgtaagc aaaatttttc acgccgcgct gacaaatttc
     8581 cccgcgttgg acggtatgga cgaggtgctg gcggcagcgt cggcgcaaat tttaaaaccg
     8641 gaaacggagc aaaaccctat gaaagagttg ttacagcaac tgttcgacct gcctgatgcg
     8701 ggcgaagaag aactgaaggc ggcattgtcc gcgctcgtgg aagccaagcc gaaagacgtg
     8761 gcattgtctg ccgacgtgtt cgcgcagctg gcggaaaaag acagccgcat cgcggcattg
     8821 acggcgcaaa ccgccaagcc tgatttgact aaatacgcgc ctatctcagt ggttcaagag
     8881 ctgcaaagca aagtcgccgc gctgactgcc aagcaggaag cagacaaagg caacgaattg
     8941 attaccgccg cgctgacttc aggcaaattg ctgcctgctc agaaggagtg ggcaaaaggc
     9001 gtattgaaac agccgggcgg cttggcattt ttgaccggct ttattgaaaa cgcccagccg
     9061 gtcgctgcac tggcaggctc gcaaacgggc ggcaaagcac ccgacgaacg cgtcgccgca
     9121 ctgactgcgg aagaggcagc cgcagcaaaa atgctgggca tgtccggcga agaatttgta
     9181 aaaatcaaag aaagcgaagg taagtaatgg acaaatcagc gattttgacc gcaatcacgg
     9241 cagcattccg caaagaattt caaacggcct tggattcgga tttcaagtgc aacactaagg
     9301 tac
//
LOCUS       DAXHRP010000073         9291 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.073, whole genome shotgun sequence.
ACCESSION   DAXHRP010000073 DAXHRP010000000
VERSION     DAXHRP010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.073"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            89..298
                     /locus_tag="ACFM72_001240"
     CDS             89..298
                     /locus_tag="ACFM72_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HFC6257804.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            387..1601
                     /locus_tag="ACFM72_001241"
     CDS             387..1601
                     /locus_tag="ACFM72_001241"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HFC6257805.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1688..4267)
                     /gene="clpB"
                     /locus_tag="ACFM72_001242"
     CDS             complement(1688..4267)
                     /gene="clpB"
                     /locus_tag="ACFM72_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HFC6257806.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDTVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4528..5538
                     /gene="trpS"
                     /locus_tag="ACFM72_001243"
     CDS             4528..5538
                     /gene="trpS"
                     /locus_tag="ACFM72_001243"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HFC6257807.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFKEIFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5544..5885
                     /locus_tag="ACFM72_001244"
     CDS             5544..5885
                     /locus_tag="ACFM72_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257808.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6204..6569
                     /locus_tag="ACFM72_001245"
     CDS             6204..6569
                     /locus_tag="ACFM72_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257809.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(6778..8286)
                     /gene="ppx"
                     /locus_tag="ACFM72_001246"
     CDS             complement(6778..8286)
                     /gene="ppx"
                     /locus_tag="ACFM72_001246"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HFC6257810.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPVGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDSAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8403..9134)
                     /locus_tag="ACFM72_001247"
     CDS             complement(8403..9134)
                     /locus_tag="ACFM72_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC6257811.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLRLSLGYKNR
                     SVTRSFGIVPFIGQNLLGGSRYNFVGGFNADFSRRLSERWRLTLNVGNMWKRYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHDLTKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTLVYCFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
BASE COUNT         2152 a         2413 c         2459 g         2267 t
ORIGIN      
        1 gatttgaatt tttcagaaaa tgaagcggac gtttgggcgg aggcaacttg tttgataaga
       61 tagcaatatt ttaaaacgga gaaagatcat gccttatgtc aatattaaag taaccggcgg
      121 caaggaagca ccgactgccg cgcaaaaagc ggaactgatc ggcggcgtaa ccgaattgct
      181 ggcacgcgtg ctgggcaaaa atcccgaaac aacggttgtc gtgattgacg aagtggatac
      241 cgataactgg ggaataggcg gcaaaagcgt cagcgaacgg cgcaaagagg gcaggtaaaa
      301 agcctgaaaa tctcggtttg atgctttaaa ttccgcgtga aaaagagtac attcccaccc
      361 attgcccaaa atttacggaa cacatcatgg ataaatttcc caagtctgca aagctcgatc
      421 acgtctgtta cgacatacgc gggccggttc acaaaaaagc ccttcagttg gaagaggagg
      481 gcaataaaat ccttaaactc aatatcggca accctgcgcc gttcggcttt gaagcccctg
      541 atgaaatctt ggtcgatgtc atccgcaacc tgccgacttc gcaaggctat tgcgattcta
      601 aagggctgta ttccgcccgc aaagccattg ttcactacta tcagaccaaa ggtttgcgcg
      661 atattacggt tgatgatgtc tatatcggca acggcgtgtc cgagctgatt acgatgtcta
      721 tgcaggcatt gctcaacgac ggcgacgaaa tcctgattcc cgcgcccgac tatcccttgt
      781 ggacggcggc ggcaacgctt gcgggcggta cggtacgcca ttatctgtgc gacgaagaaa
      841 acggctggtt ccccaacctt gccgatatgg aagccaaaat cacgcccaaa accaaagcca
      901 tcgtcgtcat caatcccaat aatccgacag gcgcggtgta cagcagggaa atcctgttgg
      961 aaatcgccga actggcgcgc aagcacggtt tgattatttt cgccgacgag atttacgaca
     1021 aaatccttta tgacggcgcg gttcaccacc acatcgccgc gcttgccccc gaccttttga
     1081 cggtaacgtt caacggtttg tccaaagcct accgtgtagc cggattccgc caaggctgga
     1141 tggtgctcaa cgggccgaaa catcatgcaa aaggttacat cgagggtttg gatatgctct
     1201 cgtctatgcg cctgtgtgcc aatacgccga tgcagcacgc gattcagacg gcattgggcg
     1261 gctatcagag catcaacgaa ttcattttgc ccggcggacg gcttttggaa cagcgcaaca
     1321 gggcgtggga actggtcaac cagattcccg gcgtatcctg cgtcaaaccg atgggcgcga
     1381 tgtatatgtt cccaaaaatc gataccgaaa tgtaccgtat ccgcgatgac atgaaattcg
     1441 tttacgattt gctggtgcgc gaaaaagtct tgctggtgca gggaacgggg tttaattgga
     1501 tcaagcccga ccatttccgc attgttacgc tgccttacgt ccatcagatt gaagaggcga
     1561 tgggcaggct ggcaagattc ctgcaaacct accgccaata aggggacggt ttgtctgccg
     1621 aggataaaaa atgccgtctg aaacggagat tcccgtttca gacggcattt tcaacagcag
     1681 gaacgaatca ggcaaatttc agtctgtcgc cgtcggcttc caccctgatt tcgctttcgg
     1741 gcgcatagtt tccggcaagc agggcttttg ccagcgggtt ttcgatttcc gactggatgg
     1801 cgcgtttgag cggacgtgcg ccgtaaatcg ggtcgaaacc ggctttggcg atgatgtcca
     1861 gtgcggcatc ggaaacagtc aggcgcaggt tttgtttttc caaacgtttt tccaaacctt
     1921 tgagctggat tttcgcaatg ctgcggatgt ttgcctgatc caaaccgtgg aacacgacca
     1981 cttcgtcgat gcggttgatc atttcaggac ggaaatgttc tttcacatcc tccatcacaa
     2041 cttcttttac cgcttcgtaa tcctgaatgc ccatttgttg gatgtgctgg ctgccgatgt
     2101 tggaagtcat gacgataaca gtgtttttga agtccacggt gcgaccttgc ccgtcggtca
     2161 aacgaccgtc atccaatact tgcagcagga tgttgaacac gtcgggatgg gctttttcca
     2221 cttcgtccag cagaatcacg ctgtacggtt tgcggcgcac ttgttcggtc aggtagccgc
     2281 cttcttcgta gccgacataa cccggaggcg cgccgattaa gcgggcaacg gcgtgttttt
     2341 ccatatattc ggacatatcg atgcgaatca gatgatcttc gctgtcgaac agaaagcctg
     2401 ccagggcttt acacaactcg gttttaccca cgccggtcgg gcccaagaac aggaagctgc
     2461 cgtaaggctt gttcggatcg gcaagaccgg agcggctgcg gcggatagcg tcggacacgg
     2521 cacgcacggc ttcgtcttga ccgactacgc ggcggtgcaa cacttcttcc attttcagca
     2581 acttgtcgcg ttcgccttcc atcatttttg acacaggaat gccggtcata cgggaaacaa
     2641 cttctgcgat ttcctctgcg ccgacattat tacgcaagag tttgtttgcc ggttttgtgc
     2701 tgtccgtatc tgcccgttcg gcggctgcac gctgtttttc caaatgctcc aaatcttcat
     2761 acatcaattt tgaagccagt gccaaatcgc cttgccgttt tgcctgttcg attttaattt
     2821 tgacttcgtc aatttgtttc ttaatattag cagcaccgtc tgaaattgct ttttcggctt
     2881 tccagatttc gtctaaatcg gcgtattctt tttgcagacc gttgatttcc tcgtctatca
     2941 gttccaaacg ttttttgctg gcatcgtctt tttctttttc aacgtgcgcc ttttccatcc
     3001 gaagctgaat tagacggcgg tcgattttgt ccattgcttc cggcttggtt tctttttcca
     3061 tcttgacacg gctggcggct tcgtcaatca aatcaatcgc tttatcaggc aggaagcggt
     3121 cggtaatgta gcggtcgctc aactccgctg cggcaacgat agcagggtcg gtaatatcga
     3181 taccgtggtg gatttcataa cgctcctgta aaccgcgcaa gatagcgatg gtgtcttcta
     3241 cacttggctc gccgaccaat actttttgga agcggcgttc gagtgccgcg tctttttcga
     3301 tgtattggcg gtattcgtcc aaggtggtcg cgccgataca gtgcaattcg ccacgtgcca
     3361 aagccggttt cagcatattg cccgcatcca tcgcaccgtc ggttttgcct gcgccgacca
     3421 aagtatggat ttcgtcgatg aaaatcagag tgttgccgtc gtctttcgcc aagtcgttca
     3481 acacgccttt caagcgttct tcaaattcgc cgcggtattt cgcgccggca atcaatgccg
     3541 ccaagtccaa aaccagtagg cgtttgttgc gcagggattc gggtacttcg ccgttgacga
     3601 tgcgttgtgc caaaccttcg acgatggcgg ttttacccac gcccggttcg ccaatcagca
     3661 cagggttgtt tttggtacgg cgttgcaata cctgaatcgc acggcggatt tcgtcgtcac
     3721 ggccgataac ggggtcgagc ttaccgtctc gggcgcgttg ggtcagatcg agcgtatatt
     3781 ttttcaaagc atcgcgttgg tcttcggcat tggcatcgtt cacgttttgt cctcctcgta
     3841 ccgtgtcaat cgcggcattg atgttttgtt cggtcgcgcc ggcttctttc aaaattttgc
     3901 cggccgcatc gttctgctgc accaaggcaa gcaggaaaag ttcactggcg atataggcat
     3961 cgccgcgttt ggttgcggct ttgtccatca ggttcaacac cgcctgcaat tcgcggctgg
     4021 gcagaatgtc gccgccctgg ccggacactt tcggcaggct gttcaaatgc tgctgcaaac
     4081 gctgtttcac ctgcggcacg ttcacgcccg catgagccaa gagcgcggca gcaccgctgt
     4141 tttggtcgtc aagcagggct ttcagcacaa agcccgcttc cagatagctg ccgtccgcag
     4201 ccaacgccaa actctgagct tctgcaaggg cctgttggaa tttggcggtt aatttgtcgt
     4261 atcgcatttt tgtttccttt tcaaaatgtc cgctgtcgaa gcctatatgt gcataattgt
     4321 ggataactca agttctgttt tctgtttttc tatatttaat tcgatatatc attgaattta
     4381 aagtatataa aaatgtataa taatgtgtat aactatatct tcttaatatg gaaaagtctg
     4441 ttgtcggctg gatgtaggtg gcaaatcggg tataatcggc gcatcttttt ccctttcaga
     4501 cggcattgat gccgcaagga catttttatg agcaaaaaac gagttctgac cggcgtaacc
     4561 accaccggca tcccgcatct gggcaactac gtcggtgcta tccgccccgc cgtccgcgcg
     4621 gcgcaaaacc ctgataccga atccttcctc ttcctcgccg attaccacgg tatcatcaaa
     4681 tgccacgagc cggagatgat tcaccaatcc acccaagccg ttgccgccac ttggcttgcc
     4741 tgcggactcg accccgagcg caccaccttc taccgtcaaa gcgacattcc cgaagtgatg
     4801 gaattgaact ggattctgac ctgcatcacc gccaagggtt tgatgaaccg cgcccacgcc
     4861 tacaaagccg ccgtgcaggc aaatgcggaa aacgggcagg aagaccccga tttcggcgtg
     4921 gaaatgggtt tgttcagcta tccgattctg atgaccgccg acatccttat gttcaacgcc
     4981 aacgaagtcc ccgtcgggcg cgaccaaatc caacacgtcg aaatggcgcg cgacatcgcc
     5041 ggccgcttca atcaccgctt taaagaaatc tttaccctgc ccgaagtgaa aatcgacgaa
     5101 aacgtcgaac tcttggtcgg tttggacgga cgcaaaatgt ccaaatccta cggcaacacc
     5161 attccgcttt gggaaaacga caaaaaaacc caaaaatcgg tcaacaaaat catcaccaat
     5221 atgaaagagc cgggcgagcc gaaacagccc gacgaaagcc cattgtttga aatctacaaa
     5281 gccttctcca cgccgtctga aaccgcagcg ttcacgcaaa tgcttgccga aggcttggct
     5341 tggggcgagg caaaaaaact tttggcggcg aaaatcaacg ccgaactcgc cgaaccgcgc
     5401 gaacgctaca acgagctgac cgccgaccct tcgcaaatcg aagagatttt gcaggcaggc
     5461 gcgcaaaaag cgcgtaaaga agcacgcgaa ttgttggaca aagtacgcga tgcggtcggc
     5521 atccgcccgt tgaaataaac ccgatgccgt ccgaacctct taaaggcttg ccggaacaaa
     5581 acgtcgtccg gctgaccggc aagcatccca acgacttgga agccgtcagc ggcaaatgca
     5641 tggaaaccga cgataagggc ggtccggtag gctgggcgga aaacggcgtg tgccatacct
     5701 tgtttgccaa actggtgggc aatatcgccg aagacggcgg caaactgacg gattacctga
     5761 tttcgcattc cgccctgcaa ccctatcagg caggcaaaag cggctatgcc gccgtgcaga
     5821 acggacgcta tgtgctggaa atcgacagcg aaggggcgtt ttatttccgc cgccgccatt
     5881 attgaggtat tcggacatcc cggaatatat ttgggttttt caaaccttgc gaaaaaagtc
     5941 cgcaccgccg ggaaactcaa aaggaggggg atatgtgtta caattttccg aactgttttc
     6001 ataaaatagt tttcggacgt gtttcaatat ggcattgatg ccgccttatt gttcgagaaa
     6061 aaaaccttta tatttaaata taatgggttt taactaaacg ggaaaccgtt ttctctccgg
     6121 ccgatgggca aaatcagccg attgatggaa cacggtccga tttttaagca aaaccttaat
     6181 caacaactca agaaggataa gacatgaaaa aattattgat tgccgcaatg atggcggctg
     6241 ccttggcagc ttgttcgcaa gaagccaaac aggaggttaa ggaagcggtt caagccgttg
     6301 agtccgatgt taaagacact gcggcttctg ccgccgagtc tgccgcttct gccgtcgaag
     6361 aagcgaaaga ccaagtcaaa gatgctgcgg ctgatgcaaa ggcaagtgcc gaggaagctg
     6421 taactgaagc caaagaagct gtaactgaag ccaaagaagc tgtaactgaa gccaaagaag
     6481 ctgtaactga agcagctaaa gatactttga acaaagctgc cgacgcgact caggaagcgg
     6541 cagacaaaat gaaagatgcc gccaaataat ttgttgcctt ggcaaaaatg atgggatgcc
     6601 gcctgccggc aacccaaacg aaaccgcctg aagattttca ggcggttttt gagttgtatg
     6661 ccccttgttt tttacgcctg catgaccgtt ccgagcagat gtgccgcgca tatcgggatg
     6721 ttgcggacag gcaaatgccg tctggacagg gtttggacgg catttgcccc gcaaggttca
     6781 gacggcctcg actttaaacg gcatattgat tttttgccat tggacgcttt catattccaa
     6841 tgcgtcggca atcaggggat ggcgttccag ccattccctg tcaatacgca ggatgaagcc
     6901 gcagctttcc gtatccgtgc gcaactgcat gtttttcggg aaagacaggt cttggcgcga
     6961 acggcagaac agtgcggcaa ggcgcaggga caaaacggca taccacaaca tttcgttggt
     7021 gccgatgatg ccgctcattt ttttcatatc gccgcgatga ccgatgacca gttgggcaag
     7081 tatggtttgt tccttgcgtg aaaagcccgg catatcggcg ttttcgagga tgtaggcgga
     7141 atgcttgtga tagccggtgt gggcgatgtc caaaccgatt tcgtgcaacg cggcggcgcg
     7201 tccgagatac tgttgccaca aggcaagctc ttgaaccgta acatttttag cgtggcagag
     7261 gctgtccata aaggtttgcg cggtctcggc ggtgcgtttc gcctgattga ggctgacgtg
     7321 gtagcggtgt tggaactcgg caaccgtttg tccgcgcata tcttcgttta aaccgcgccc
     7381 gatcaaatcg taaaacacgc cgtcgcgcag ggcggcttcg gttacggtca tcctgtcgag
     7441 tttcatttcc tcaaacgccg ccatcatcac ggcaagtccg ccggcaaaaa cttcgatgcg
     7501 ttccggtttc aggttttcaa atttggcttt tttgaccgaa ccggcttcga tgatgcgttc
     7561 ggcgagggcg cgcatgcctt tgtaggtaat gtccgcctct tggggcattt cggcggcaag
     7621 cacgtcgcgg atggattttg ccgaacccga tgtgccgacg gcggaatccc aaccttcgcg
     7681 cctcatattt ttgctgatgc gctggatttc gttgcgggcg gcggaaatgg cagattggaa
     7741 gtctttggcg gtgattttgt tttggaagaa gcgcaggctg taggttacgc agcccaaggg
     7801 caggctttcg gtaatgtcgg gattcagcgt cgaaccgatg acaaattctg tcgaaccgcc
     7861 gccgatgtcg ataaccagca ttttgccgcc gaccgggggg agggtgtgga tcacgccggt
     7921 ataaatcagc cgcgcctctt cgcgcccggc gatgatttct atggggaaac ccagtgccgc
     7981 ttcggccttg ggaaggaaat ctgcgatgtt tttggcgacg cggaatgtat tggttgccac
     8041 ggcgcgtacc tgttcagggc ggaagccgcg caggcgttcg ccgaattttg ccagacagtc
     8101 caaagcctgt tcttgggaag cggcactcag gtttttctgt tcgtccagac cggcggcgaa
     8161 gcgcaccatc tgtttgaacg aatcgatgac ttttaattgt ccgttgttgt tttcgcaaat
     8221 ctggaggcgg aaactgttgg aacccaaatc gacggaggcg aggatgtttg cgggggtggt
     8281 ggtcatggcg gatatcggtg ggggaaaaac gcaatgttac tctgacggcg caggcgttga
     8341 caataaatga tgcggctgtt tttgattctg ctcgcggatg ttgccgacgg cattttttgc
     8401 gcttatttga aatccttttc cacgctcatg aaaatctgca tgtttttgcg tgtgtaaaaa
     8461 cttttcatat tgctgtcgat tttcagatag cggaaattga gttgcggcgt aaagcccttc
     8521 caagagattt tgtcgtgcca caacgacagg tttgcctgat attcgtggtc tttgcgcggg
     8581 aagcagtaca caagggtccc gggtgcatca aaagtcctgc gggtgtagcg caggtttgcc
     8641 cgcagaccca agccgccgtc gaacgttttg accgctccga cacgcaaacc cttgcggatg
     8701 gaagcctgtt ccgcctcctt cgtcaagtcg tgcgaccagt ccgcaccgcc gtaaagcagc
     8761 cagtctttcg gcgcggaata catcagcgtc gcgcccgcca gcggcatatg gctgtcgtat
     8821 cgggcggcgg tgcggtcttc ctgataacgc ttccacatat tgcccacgtt cagcgtcagc
     8881 cgccagcgtt cgctcaagcg tcgggagaaa tcggcattga agccgccgac gaaattgtat
     8941 cggctgccgc ctaagaggtt ttgcccgata aacggcacga tgccgaacga gcgcgttacc
     9001 gaacgatttt tatagccgag cgacaggcgc aggcactgtt cgctgaaatc tttgttatcc
     9061 caataatgca cgccgccgcc gctgatgccg ccgtagagga aatgatgccc gcccgcattg
     9121 atttcgcgcg acacgcctaa gccctagcgc aaaccgtgtg ccttttgcgg caggctgtcg
     9181 gcggttttcg tccagcttct gcccgcaaat tcaatcgttt ttttggacga agcgttgttt
     9241 atagcggatt aacaaaaatc aggacaaggc gacgaagcct cagacagtac a
//
LOCUS       DAXHRP010000074         9247 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.074, whole genome shotgun sequence.
ACCESSION   DAXHRP010000074 DAXHRP010000000
VERSION     DAXHRP010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.074"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(44..3076)
                     /locus_tag="ACFM72_001248"
     CDS             complement(44..3076)
                     /locus_tag="ACFM72_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC6257812.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPTGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAICPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETILGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3241..3921
                     /locus_tag="ACFM72_001249"
     CDS             3241..3921
                     /locus_tag="ACFM72_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HFC6257813.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3950..4309
                     /gene="crcB"
                     /locus_tag="ACFM72_001250"
     CDS             3950..4309
                     /gene="crcB"
                     /locus_tag="ACFM72_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HFC6257814.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPASLSPATGNLFANWIGA
                     FLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTLLQLNRPASALSNIFLHTV
                     GSLLLTWLGLKIGAAVK"
     gene            complement(4976..5512)
                     /locus_tag="ACFM72_001251"
     CDS             complement(4976..5512)
                     /locus_tag="ACFM72_001251"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HFC6257815.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEGKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYTAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(5546..5902)
                     /gene="folB"
                     /locus_tag="ACFM72_001252"
     CDS             complement(5546..5902)
                     /gene="folB"
                     /locus_tag="ACFM72_001252"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HFC6257816.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            5958..6560
                     /gene="plsY"
                     /locus_tag="ACFM72_001253"
     CDS             5958..6560
                     /gene="plsY"
                     /locus_tag="ACFM72_001253"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HFC6257817.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPVAASFF
                     MPHVSWVWATVAIALLVLFRHKSNIVKLLEGRESKIGGSR"
     gene            6637..7482
                     /locus_tag="ACFM72_001254"
     CDS             6637..7482
                     /locus_tag="ACFM72_001254"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HFC6257818.1"
                     /translation="MLSYRHAFHAGNHADILKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKELISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            7728..8702
                     /locus_tag="ACFM72_001255"
     CDS             7728..8702
                     /locus_tag="ACFM72_001255"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HFC6257819.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDTFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPDGELKTESFLQAGRHQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     TGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPAKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEVAYLDRLHAK"
     gene            complement(8845..9063)
                     /locus_tag="ACFM72_001256"
     CDS             complement(8845..9063)
                     /locus_tag="ACFM72_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HFC6257820.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            complement(9039..>9247)
                     /locus_tag="ACFM72_001257"
     CDS             complement(9039..>9247)
                     /locus_tag="ACFM72_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257821.1"
                     /translation="GKAENLCVKRDIVNVFINRTAVLKENFAVSDKTLDKNIIFVIIN
                     VKIQFDFLTVNQERKAICSQNTVI"
BASE COUNT         2131 a         2726 c         2155 g         2235 t
ORIGIN      
        1 ccgtctgaaa cagtcttcag acggcatttc catttgcaaa aaatcaagca ttgtccaagg
       61 ggacgagaat cgtacggttg ccgttgtgtt ccggtgcgga cacaatgcct tccgcctcca
      121 tctggtcaat cagacgcgcg gcgcggttgt agccgatacg caaggcgcgc tgtacgcccg
      181 aaatgctggc tttgcgcgtt ttcaggacaa cggatacggc ctcgtcgtac atcggatcgg
      241 tttcgtcgtc gccgctgcgc ccgatgccgg gcagctcttc gctgccgccg ccgctcaaaa
      301 tatcgtcaac atagtccggc tcgccaaact gtttcaaata ttcgaccacg cggtgcacct
      361 cttcatccga ggcaaacgcg ccgtgaacgc gctgcggata ggcagtaccc ggcggcagga
      421 acagcatatc gccctgaccg agcaggtttt ccgcgcccat ttggtcgaga atcgtgcggc
      481 tgtcgatttt gctggacact tggaacgcga tacgcgtcgg gatgttcgcc ttaatcagac
      541 ccgtgatgac atcgacactg gggcgttgtg tggcaaggat aagatggatg cctgccgcgc
      601 gggctttttg ggcgaggcgg gcaatcagtt cctcgatttt cttgcctgcc gtcatcatca
      661 aatcggcaaa ctcatcgacc acgaccacga taaacggcag tttttccaaa ggttcgggat
      721 cgtcgggcgt gaggctgaac ggattgccga ttttttctcc ccttgctgcg gcttcggcga
      781 ttttttgatt gaagcccgca agattacgca cgcccataaa gctcatcagg cggtagcgtt
      841 tttccatttc gttaacacac cagttcagcg cgtttgccgc cagcttcata tcggtaacga
      901 caggggcgag caggtgcggg atgccttcgt aaatgctcaa ttccagcatt ttcggatcga
      961 tcataatcat acgcacgtct tccggcgcgg ctttgaaaag catagacaga atcatcgcgt
     1021 tgacacccac cgatttgccc gaaccggtcg tgccggcaac cagcaaatgc ggtgctttgc
     1081 ccaagtcggt tacaacgggc tgtccggtga tgtcctgacc gagcgcgagc gtcagcttgg
     1141 atttggattc ggcaaactcg ggcgaattga agatttcgct caggcgtatc atttggcgtt
     1201 tcgggttcgg aagttccaaa cccatacagg ttttgccgag gatggtttcg acaacgcgga
     1261 tggaagccac gccgagcgaa cgcgccaagt ctttttccag atttagaacg gaattgccgc
     1321 gcacgccgac atcgggttcg atttcataac gcgtaatcac ggggccggaa taagaatcga
     1381 caaccttgac cttgactttg aactccgcca atttttcttc gatggtgatg ctgttttcca
     1441 acagttcttc ttcggtttgc gtcgcctcgg gattgaacag cggcggcaga agcaggtcgg
     1501 ttgtcggcag gtgttcgtat accgcatcgg tttcttcaga ttggaacgcc ccttcatccg
     1561 cttccgtatc cgatacccgg caggacgggc gttcagacgg cacatcttca aacggacaaa
     1621 tcgcctgact gtcatgcccg aacgcttcgg tttccgacag atattgcccg tttgaccgct
     1681 ctgccgcacc ttcactgccg tcatctgcaa tagcggcggt ttcctcctgc caacctccat
     1741 tcaaaacatc atcggcaaga tggtcggttt cagcaatgcg gctgcgttgc gcctgctcga
     1801 atcctgtcgg cggctcatag gtacggttgt agatttccga tacgggaggc ggcggcggaa
     1861 tatcgattgc gggcatggga actttcggca cttcgggtgg ttcgaccacc caagcatcgg
     1921 gcgcagcagg ttcttcaata tagatatcgg cagcttcatc ataaaccgga ccgccgtatc
     1981 ccacagacga aacggtttcc gtgaaaacat tttcggtttc agacggcatt tcgacatccc
     2041 gtttcccgac aaccgtccga ctttccggaa tcaggcgcga aatccgcgcc tccgcagaaa
     2101 ccgttgcctt gttcggttct ttcaaattga cggaaacgcg gcggcaggca tcgcggacgg
     2161 ctgtgccgtc tgaaacggac tgtccttggg aaacatccgg ggattttgcc tccgcctgcc
     2221 ctgcatgacg gcggaacggc gcattccgtg cattttcggc tttgactgca gaaaaggcag
     2281 acggatgctg cttctcaaaa tacggctcaa atccgtaatc cgcagactcg gaaaacgctt
     2341 ctttgtccgc atcgaacata cgggaatacg tgcgttgaag cacagggtcg tccaaaccga
     2401 taatctgcag cccttccatc ggggtatcgg acacgcggac tttggggacc gctgtttcgt
     2461 ttttctcaaa tgcatcgata tagcgttttt tcgtttccct taaagccgcg ctgtttaaag
     2521 cacgcgttgc ttcttccaaa gtgatttcct taaaaaccgg acggacgggc gaaatttcgc
     2581 tttcagacgg catcaaccct tcagcaatac tccggtcgaa tgggatgcgg cggttgtcga
     2641 ttacggcagt tgcaatgtct tccgtatcgg cagcctcttc ctccgcagct tctgcttctt
     2701 ccgtttccgc ttcttccgtc ccgtttccac tgtctgaata tccgtcggat gcggtcggaa
     2761 catccgcacg gtttgcagaa gcaggcggaa cgggcctgtc cggttcggat tcgtgcgcca
     2821 gatagtttcg gcagaaacgg acgacaccga caaacagcca atacactgcc gttttgacgg
     2881 catggaaaag catcagggca agttcgggaa aatcgggcat accgtctttg atttcaggca
     2941 gctccgcctg tttttcccct ttcttttcct gccacgcaga aacctcgcgc atccactcgc
     3001 gttcggattg tgcgcggaca aaaaacaagc cggcaagcgc aagcaacaaa ataacgatca
     3061 aaactatcca aaacatatgc cgtttcccgc aagacaaacg attaaacggg tttattttaa
     3121 cgtgtttcca tcccaaaaaa aacaaccggt cggcaattct gccgaaaccg attcggcttt
     3181 cggtttgccc ccgccgacag tataatagcc gtcctttccc ttaatctttg cggcattgcc
     3241 atgattttcc aaacagtctg gttttcagat atggtactgt cggtttcgtg gattgtcctt
     3301 atcctgatac tggcagcttc cgcgccgtcc gcattccgct cgcttgcccg ctaccgttcc
     3361 gcccttcccc tgtgtaccgt aattttttcc gcagcatggt gtctgaacgc ctctgccggc
     3421 ggcggacagc ttgcccagat gaactaccat ctgctcgccg tcaatctggt tgcactgatg
     3481 gtgggcactt ccgccgcctt ttggcttgcc gcgctgctga tgctgcccta ctgcctgctg
     3541 tttgccggtt ctgccggcgc atatccgccg aacgctttgg tgctgattct gcccgcgctt
     3601 gccgtcaacc gcctgtcgcg tatgctggtc aaccgcctgc cgcccaatat tttcatcttt
     3661 attttcgtca acggctttct cgcttccgcc gccggcattc tgttgaccgg gctggtgctg
     3721 accggtattt tggatgctgc aaacgctttt ccgtccgaaa tattgtggac gaccgccctg
     3781 cccgtcttta ttctgctggc gtgggcggaa gccttcctca gcggcatttc aactgccata
     3841 tttgttgcac tgaagcccca ttggatcaac actttcgacg acaaccgcta tctgaagtcc
     3901 gaccgcggca tatggcggta gccttcagac ggcataggca gacaaaacca tgctttccaa
     3961 catcatcccc ctttccatcg gtgcggcact cggtgcaacg gcgcgttggc tgctcaacct
     4021 cgccgttccc gcatcgttgt ctcccgccac aggcaacctg tttgccaact ggataggcgc
     4081 ttttcttatc ggaatctttg ccgaaaccgt caaccacccg caatggaagc tgctgctgat
     4141 taccggtttt ctcggcagcc tgaccacgct ttccggattt tcactggaaa ccgtaaccct
     4201 gctccaattg aatcgtcccg cttcagcact ttccaatatt ttcctgcata cggtgggttc
     4261 gctgctgctg acttggctcg ggctgaagat aggggcggca gtcaaataac cgcaacaaat
     4321 tgcctccctt tgttttgaca taatctataa attagcttcg cttgtttaaa tactggctgt
     4381 gccaattata gtagattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa
     4441 tagtacggaa ccgattcact tggtacttca gcaccttaga gaatcgttct ctttgagcta
     4501 aggcgaggca acgccgtact ggtttttgtt aatccactat accgttctca aattcaaatt
     4561 gggcttttag gtctataaca aagaaaaagc cttggtagga taaacctacc aaggcttttt
     4621 cttaaaaaaa cgctctatta ccgtgcctaa aaatgcaaaa aaagtaacca tcataaccct
     4681 tttgccaaaa ttaatatcat ctattaattc atcatgccat gcattaatag atggtatata
     4741 agaaagagcc aataaactaa taaaccaata acaaaaatta gtaacaaaga tattcattat
     4801 taaccatttt aaaaattatc atgttcgttt gggtaattat catacccttt tccctcttat
     4861 tactaaagca cgaatgactt tgaaggacgc gcccagagac aagccgaaaa ggcatatctc
     4921 atccgccaaa caaaatgccc gccgatctac tccggcgggc aattccaaca tcctgtcaat
     4981 ctttcatcag ccagtattgt aaaccgatta atgttttacc atctttaatt tcatcgtttg
     5041 ccaatgcctg acggacttct tctttcgaca tcaatacggt ttccgtaatc tcgtcttcgt
     5101 cattggcaag cgtactgccc aaacgcacgc cttccgcttc gaacagatac attttttcgt
     5161 tgcaaaaacc gaccgccgta taaaaactgt aaagcaggcg cacgctgtcg gcggtataag
     5221 gtgtttcctc cgccaattct cgcagcgcac acgctgccat atcctcgccc gccacatcca
     5281 gcttgcccgc aggaagttcc aatgtcgcct gatttgccgc ataacgccac tgccgcacca
     5341 aaaccacttt cccctcgtcc gtaaccgcca acacgcatgc cgcacccgga tggcggatga
     5401 cgatacgctg cccttcattg ccgttgggca acctgacctt atccctgctg atactgacga
     5461 aaccgccctc gtaaatggtt tcgccgccta attttacttc cctcaaatcc acttcatatc
     5521 tcctttccgt ttcctattct gccgttcaat cttcacgctt gccgcgctcg atttccacgc
     5581 caacctcgcg cacgccttcc aaaatacccg gcttgacgat tttcacgcgc acccacaccg
     5641 cgccgaaata tcccaaaacc aaatcggcaa tatattccgc caacgcttcc aaaagcagga
     5701 aatcctgttc tttcagatgt cggcgcagcg tttcgcatac ctcggcataa tgcaccgtat
     5761 tggcaatatc gtcgtccgaa cccgctttct cgggaacacc gatgtccaaa tcgacaatca
     5821 gggtctgcaa ccgttcgcgt tcccagccgt acacgccgat aagcgtatcc gccttgatgc
     5881 cgtgcaaaaa gattttatcc ataatccgcc ccgttttttg ctaaaataac cgcaccattc
     5941 taagtaaagt accgcaaatg ttcaacatac cggctgttgc tgtttcctat ctgatcggct
     6001 cactttcttt cgccgtcatc gtgtccaagt attacggcat ggacgacccg cgcacctacg
     6061 gatcgggcaa tccgggggca accaatgttt tacgcagcgg caaaaaaaag gcggccgcgc
     6121 tgacgctctt gggcgatgcc gccaaaggtt tagttgccgt tttgcttgca cgcgtgcttc
     6181 aagaaccgct cggtttatcc gacagcgcaa tcgcggccgt cgcactcgcc gcgctggtcg
     6241 ggcatatgtg gccggtgttt ttcggattta aaggcggcaa aggcgtggca acggcattgg
     6301 gcgtgcttct ggcactctct cccgcaactg ccttggtctg cgcgttgatt tggcttgtta
     6361 tggcattcgg cttcaaggtg tcctcccttg ccgcattaac cgccacaatc gccgcaccgg
     6421 tcgccgcatc cttctttatg ccgcacgtct cgtgggtttg ggcgaccgtc gccattgctt
     6481 tgctggtgtt gttccgccac aaaagtaata tcgtcaagct gctcgaaggc agagaaagca
     6541 aaatcggcgg cagccgctga tttcccatcc atccctgttt atgccgtctg aaccccgctt
     6601 cagacggcat ccgaatatcc cgccgtttta ccgactatgc tcagttacag acacgcattc
     6661 cacgccggca accacgccga tatactcaaa catttcacct tgtttttagt gctgcaatat
     6721 ttcaaccgca aagacaagcc ctactggtac atcgacacgc acggcggcgc gggtgtgtac
     6781 aatctcgaag gcagcgaggc gcagaaagtc ggcgaatacc gacaaggcat cgccctgctc
     6841 cgacaggcgc aaaacctgcc tgccgaactc tctgactttg ccgcgcacat acaaaaaatc
     6901 ctgccctcgc ccgaacttta ctgcggttct ccgtggctgg cgcaatcgct gacccgcgtc
     6961 ggcgacaaat tacgcctgtt tgagctgcac cccaccgact ttgtccatct gcaaaacaat
     7021 atgggcgaag caggattggg caaacgcgga caagtgttgc gcgaagacgg ttacaaagag
     7081 ctgatttccc tgctgccgcc cccgccgcgc cgcgccaccg tcctcatcga cccgccctat
     7141 gaggaaaaac aggactaccg gcgtgtaacg gaaacgctga aagccgcttt aaaacggttt
     7201 gagtccggct gttatctcat ttggtatccc tgcctcagcc gcgaagaaag ccgcaagctg
     7261 cccgaagaat tgaaaaaact cctgcccgac aactaccttc acgccgaact tcacgtccac
     7321 gcgccgaaag ccgacggttt cggtatgcac ggcagcggaa tgttcgtcat caatccgccc
     7381 tatctgttgg cggaacaatt ggcggcaaac ctccccgccc tgacgcggct gctggcgcaa
     7441 gacgaaggcg cgcgctacct tttggacagc aaaatccgct gaccccgatg ccgtctgaaa
     7501 cccttcagac aacatctccc gtcaaataaa caaaaccgga cgatataccg gcagtcggca
     7561 cttttaagaa taaatatccc ctcatccgcc tgccgcgttc cgacttgccc cgcgccgttt
     7621 ttttccacta caatcccacg cgatatctgg cggaacgcac caaaggaacg ccccgcagca
     7681 atctgccgcc tttcagacgg cacaaacctt tccgaaacga gcaaactatg gacacactga
     7741 cccgattcct ccccgaacac ctgcaacaaa accagctgcc cgaagcactc ggcggcgttt
     7801 tactgtccgt tgtttccgcc tgcaccgaaa tcaacgccaa agtccgcctc ggcgcactgg
     7861 ccggcgtatt gggtatggcg ggcacaggca atattcaggg cgaagaccag aaaaaactgg
     7921 atgttatcgc caacaacatt atgattgaca cactcaaagc caaccctgcc gttgccggtt
     7981 tggcaagcga ggaagaagac actttcgtaa gtgccggtga aaacggacgc tatctcgtcc
     8041 tattcgaccc tttagacgga tcgtccaata ttgatgtcaa catttccgtc ggtacgattt
     8101 tctccatcct tgaaaaaccc gatggcgaat taaaaaccga gtccttcttg caagccggcc
     8161 ggcaccagct tgccgcaggc tatgtcctct acgggcctca aacccagctc gtattcacat
     8221 tcggacacgg cgtatatatg ttcacgctta atgccgaaaa cgaatttgtg ctgaccaaag
     8281 aaaacccgaa agtacccgaa agtaccaaag aatttgccat caatatgtcc aaccgccgcc
     8341 actggctgcc ccccgtccaa caatacatcg acgagctctt gacgggcgaa accggcacgc
     8401 gcggcaaaaa ctacaatatg cgctgggtag ccagcatggt tgccgaaatc caccgcatcc
     8461 tgatgcgcgg cggcgtgttc atgtatccgc aagacaaacg cgaccccgcc aagcccggca
     8521 aactgcgcct gatgtacgaa gccaacccta tgagcctgat actcgaacag gcgggcgcat
     8581 cggcaagcaa cgcatatcaa gccatgctcg acatacagcc cgaaaacctg caccaacgcg
     8641 tcgccgtctt catgggcagc agcgaagaag tcgcctatct cgaccgcctg cacgcaaaat
     8701 agacagacag ccgttcacac aagtacacgg cggcggcaat ccgataccgc cgccgttatt
     8761 tcaaacagca caagccttcc ggtcaaatga caaaaatgcc gtctgaacac atttcagacg
     8821 gcatttcaaa aactcaaacc cgaattattt tcccgctgct ttttgcagga tggcgtacaa
     8881 ctcgtctttc agtttcaatt tggctttttt cagctcatcg atggtttccg caccgctggt
     8941 aaccggattg ttgaccagac cggtaatttt atcgtccagc tcgttgtgtt cgtcgaacag
     9001 acgggcgaag cgggaatttt cctgtttcaa tttggaaatc aaatcacggt attctgggaa
     9061 catatcgctt tcctctcttg gtttacggtt aaaaagtcaa attgaatctt tacattaatt
     9121 ataacaaaga taatattttt atccagtgtt ttatcggata cggcaaaatt ttcttttaac
     9181 accgccgtcc ggttgataaa aacgttgaca atatcacgct ttacgcataa attttcagcc
     9241 tttccta
//
LOCUS       DAXHRP010000075         9191 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.075, whole genome shotgun sequence.
ACCESSION   DAXHRP010000075 DAXHRP010000000
VERSION     DAXHRP010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.075"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(635..742)
                     /locus_tag="ACFM72_001258"
                     /pseudo
     CDS             complement(635..742)
                     /locus_tag="ACFM72_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1098..1766)
                     /locus_tag="ACFM72_001259"
     CDS             complement(1098..1766)
                     /locus_tag="ACFM72_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC6257822.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPRISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPICHLFGITNIIGTQLETDPDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLSLVNEPVAVNPDAELEQEAKEKGWPV
                     LNFK"
     gene            complement(1763..2431)
                     /gene="hda"
                     /locus_tag="ACFM72_001260"
     CDS             complement(1763..2431)
                     /gene="hda"
                     /locus_tag="ACFM72_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HFC6257823.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            complement(2536..3126)
                     /locus_tag="ACFM72_001261"
                     /pseudo
     CDS             complement(2536..3126)
                     /locus_tag="ACFM72_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(3336..3506)
                     /locus_tag="ACFM72_001262"
     CDS             complement(3336..3506)
                     /locus_tag="ACFM72_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6257824.1"
                     /translation="MRIGNDLFVKRVQRIPGKLLVTSENPRYAPFEIDLSNTQDDIAI
                     IGRVEWYGRSID"
     gene            complement(3715..4530)
                     /locus_tag="ACFM72_001263"
     CDS             complement(3715..4530)
                     /locus_tag="ACFM72_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HFC6257825.1"
                     /translation="MERIDLALNLVKERSRLGYSRKNFAEQTGCSAESLRLYESGQVN
                     IPADFLLAAVQLGVDIQFVFTGIHSANLNAVSDDLNKKLDDAIGKSNVENQINGNVSN
                     AVIASSGSVVHQINTQNHVIRTRVDSKPGKEHITLEQASKLQQLVKQVAAAEEIAKRS
                     PKSIRAIWASLNAHCKVPSYKLIALSDYDKAETYLRKWLGRLSNTATSKNNDPDWRKK
                     KYAYIKLNVKQLELEDWLKSYLEKNFAVESLTELSNDDLQKTYAAVSTKKRKK"
     gene            4643..4894
                     /locus_tag="ACFM72_001264"
     CDS             4643..4894
                     /locus_tag="ACFM72_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC6257826.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            4896..6872
                     /locus_tag="ACFM72_001265"
     CDS             4896..6872
                     /locus_tag="ACFM72_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HFC6257827.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPIEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYEYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRSAKVG
                     ERTLDGWISAYLKAENATERLVTLAPKTTKVVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYHSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPSWSRFIADVVKCIDDYNNRPHGELPRHPDGGHYTPKAYREMRLEQDGIAPDMLSA
                     EELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRVSYDLDDADFVNVFDMD
                     GKFIAKAQINGNTREAFPVSRRDQLAENRRKGKIKRAENAIKLANAEVNPALEQAAAW
                     DELGNLGGNVIEAEYAVLPKTGTDDFVLFEADRS"
     gene            6908..7666
                     /locus_tag="ACFM72_001266"
                     /pseudo
     CDS             6908..7666
                     /locus_tag="ACFM72_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            7640..8080
                     /locus_tag="ACFM72_001267"
     CDS             7640..8080
                     /locus_tag="ACFM72_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HFC6257828.1"
                     /translation="MAKAALPDAVKHLLPDSVQALITVIGFNETLELVRLMGGTTYPL
                     RQGYTKNSQSRVAYLEEIIGSEAAGRLVEAMAPCNLFIPRCETALYELRNRKIRSQFD
                     RQTAGGTPAYEAVNDLALAHRLSDRHVWRILKQADKEAEQENLF"
     gene            8082..8603
                     /locus_tag="ACFM72_001268"
     CDS             8082..8603
                     /locus_tag="ACFM72_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257829.1"
                     /translation="MECHADVWHFILEKNMKKFYFVLLALGLAACGQEQSQKADAEQY
                     FFANKYQFADEKQAFYFERAARFRVLQQGLGGDFERFLKGEIPNQENLAKYRENITQA
                     VAYYADTNGDDDPYRVCKQAAQDAEILMKSMVTSGGGGTTDLDKESYQNYRKSMQECR
                     KTITEAEANLPKK"
     gene            8746..>9191
                     /locus_tag="ACFM72_001269"
     CDS             8746..>9191
                     /locus_tag="ACFM72_001269"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC6257830.1"
                     /translation="MSKIICLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAANKTATGIEALSTPKNKRWCQ
                     VLGKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFI"
BASE COUNT         2383 a         1864 c         2532 g         2412 t
ORIGIN      
        1 cgtcgccttg tcctgatttt tgttaatcca ctatacgtcc tagattccca ctttcgtggg
       61 aatgacgaga tgtgggtttt tgtgcggatt tgaaccggta agggtggtgt gggattggtg
      121 gtttgcttag gatcttttgg attgtatttt gtatatacat ttacctcaaa aatttccata
      181 actgaacctt tacttgttga taaaagataa aataaaatta gaaactaaaa gtgagaaaaa
      241 attaataata atagggatgt ataaatgtaa aggctccgtt tcatagctaa ggttatctga
      301 atatatggaa aaaaagtaaa agtccataaa actaaaatat atagataatg ctaatgataa
      361 tagaattatc actttcctag agtaaggata atattttttt atcgtaaaaa aatataaaat
      421 aggataaata attgccatat agatagattt tgtaacaaaa ttaaaaataa ataataaaaa
      481 taatgtaata aagtatattt tttggctatg aaataaaatt gtacataatt gaacgagcag
      541 atcaaaaaat gaactacata taacaataaa taataacgta tttaccatac taaatttaat
      601 aggtctcatt atcatattta ataaccactt catagtatag tggattaaat ttaaaccagt
      661 acagcgttgc ctcgccttgc cgtactatct gtactgtctg cggctttgtc gccttgtcct
      721 gatttaaatt taatccacta taaatgcaga gtgggtggaa acactcactt tatggtttgc
      781 tacgctctgc tcaattagca acccgataac ccaatatgga taatagggta attaatccaa
      841 tctaatttgt cagcatccgt taatttattg caaaataaag tattgaatta tgtcgggtgc
      901 aaatgacgaa atataagttt ccgtgcggac ggatcaagat tcccactttc gtgggaatga
      961 cggtggaaag attgttgttt ttcccgatga attcctgtgt tttttgtttt tccggataaa
     1021 ttcctgtggc tttgagtttt ttggatttca gcctcaatgc cgtctgaacg ccgaatcggg
     1081 cttcagacgg cattgcgtca tttgaaattc aaaaccggcc agcctttttc tttggcttct
     1141 tgttccaatt ctgcatcagg gttgacggca acgggttcgt tgacgagact cagcagcggc
     1201 agatcgtttt tggaatcact gtaaaaatag gttttgccgt agctttcgag cgtttcgccg
     1261 cgttcggcga gccattggtt caggcgggtg attttgcctt ctttgaggct gggcgtaccg
     1321 atgtaattgc cggtgtagcg accgtcggga tcggtttcga gttgtgtgcc gatgatgttg
     1381 gtgatgccga aaaggtggca gatgggggtg atgatgaact cgttggttga ggaaatcacg
     1441 agggtttcgt cgcctgccat ttggtggctc tgcaccagca tacgctgcat aggcgagatg
     1501 cgggggatga tgtattccgc cataaattcg cggtgaaact ctgccagctc ttctttgctg
     1561 taacgggcga gcggggcgag gtggaatttg aggaatgcgt cgatgtcgag gcagccgttt
     1621 tggtagtcgc ggtagaattt ttcgttttgc gcttcggttt cggcagcgtc aaccaagcct
     1681 tttttgatga ggtattgcgg ccaggcgtgg tcggaatcgg tgttgatgag ggtgttgtcg
     1741 aggtcgaaga tggcgaggtt tttcattggg tttcctgttg tttcaaaagc tggcgcaaaa
     1801 gcggcagggt gatgcgtttg cccattgtga cggcgtagtt gtccagcgtg tcgagcatca
     1861 tcatcaggct gtccatatcg cgccgccagt gtttgagcag gtattcgaaa atttcggaat
     1921 cgacggttac ttggcgtgcc gccgccatac tggcgagcgc gtcgattttt tcttggtcgg
     1981 ttaagggttt gacttcgtaa acgaggcagt acgccatacg cgtccgcaaa tcttcgcgga
     2041 tgacaagctg ctggggcgtg tattccgaac cgagcagcaa aaagcctttg ccgctgttgc
     2101 ggaagcggtt gaagatggaa aaaagcaggg cttgttcttc gttgcccagt ttttcgactt
     2161 gatcgacggc gaggtattcc gcctcgaacg cggcatcggt cagcggcatg gaggcggcat
     2221 cgatataggc ggcgtttttg ccggcttcga gcgcctgtgc gacccacgcc tgcaaaagat
     2281 ggcttttgcc cgcgccttct tcgccccaaa catagataaa ctgtccgtgt ttgtgtcgga
     2341 ggacatagac cagttccgcg ttttccgtgc cgaggaattt gtcgaaactc ggatagtcgt
     2401 gtgcggcaaa gtcgaaaata agctggttca cggttcggca ttccgagggg tggtaaacgg
     2461 gtttattgta cgttgttttc gcgcgccttt ccaatttgaa cgatgccgtc tgaaaacggc
     2521 ttcagacggc atcgttcagc cgcaggcagc gttgccgaca tcgaggtgca tattgtggaa
     2581 cgcgttgagc gtgctgcggt ggccgatgct gatgatgatg ctgtcgggca gtttttgttt
     2641 cagtgcgcgg tagagcaggg cctcggtcgg ttcgtccaaa gcggcggtgg cttcgtcgag
     2701 caggacgatt ttgggcttgg aaagcagggc gcggacgaag gcgacgcgtt gcagttcgcc
     2761 cggggagagt ttgtgttgcc agtcgtcggt tttatctaat ttatcaacca gataacccaa
     2821 gcggcaggtg ttcatggctt cgattagctc cggatgctgt ttgtcgatgt cgggataaca
     2881 aaccgcgtcg cgcaggctgc cctgtgccgt gtacgggcgt tgcggcagga agaggatgtc
     2941 ttgatgcggc ggacggctga ctttgccgct gctgccgaac ggccaaagcc cagccagcgc
     3001 gcgcagcaac gaagttttgc cgcaaccgct cgggccgcgt atcagcaggg aatcgccgct
     3061 tttgagtttg atgttgatgc cgctcaacag gatttcgccg ttgtggcgga acagagcgac
     3121 gttttcctgt gggggactgt tagtttttgc acaaggaaca aatagagtaa aaaaacgctg
     3181 aaatcttcgg aagacgtgga tttcggcgtt tttttgtatc cggaaaagtt acgccagctt
     3241 tttcacaaaa ccgcgccgga atgcgcggtt ttctgtttaa agctgacgag attagggaat
     3301 ttttaaaact gttttaagag gtttttaaaa tggatttaat caatactccg gccataccac
     3361 tcaacacggc ctatgatggc gatgtcgtct tgggtattac tcaaatctat ttcaaacggt
     3421 gcgtaacgtg gattttcaga cgttacaagc agtttgcccg gtatacgttg cacacgtttg
     3481 acaaagaggt cattgcctat acgcaagaca tataggccgt cgcgcggctc ggtttcggcg
     3541 tggttgatta gaatgtttat aaaaggcttt aactagaaac tgaacatgga acttgtataa
     3601 tagttccatg tttgaaaaaa tcttttaata tcatacatct aaaaaaacaa agcatctgaa
     3661 gaccataagc taaacatgaa acttgaattt aaaggcggag tttcatgttt aagcctattt
     3721 tttccgtttt ttagtcgata ctgctgcata tgttttttgc aaatcgtcat tacttaattc
     3781 agtcaggctt tctactgcga aatttttttc gaggtaactt ttcaaccaat cttcaagctc
     3841 aagttgtttt acatttaatt tgatataagc gtatttcttt tttcgccagt cgggatcgtt
     3901 gttctttgat gttgctgtat tgctcaacct acccagccat tttctgagat aagtttctgc
     3961 tttgtcgtaa tcgctcaatg cgattagttt gtaacttgga actttacagt gagcattcag
     4021 actagcccaa attgcacgga ttgattttgg cgaccgtttg gcaatctctt ctgctgcggc
     4081 aacttgttta acaagttgtt gcagctttga agcttgctca agcgttatat gttccttgcc
     4141 gggttttgaa tcgacacggg ttctgatgac gtgattttgg gtattaattt gatgaacaac
     4201 cgaaccagat gaggcgataa cagcgttact gacgttgccg ttaatctgat tctcaacgtt
     4261 tgatttgcca atagcgtcgt ccaatttttt attaaggtcg tctgaaacag catttaaatt
     4321 tgccgaatga atgcctgtaa agacaaattg aatatccacc cctaattgga cagcagcaag
     4381 taaaaagtcc gcaggaatgt tgacctgccc gctttcatac agtctcaaac tttctgcact
     4441 gcatccagtt tgctcagcaa aattctttcg agagtatcca agtcggcttc tctctttaac
     4501 taaattcaat gctaaatcaa tgcgttccat aaaacaccgc aaaatagtac caaatatatt
     4561 gggtatatca tccaggtaac agttaaggca ggcattaaag cctgtaaggt aagtaagtaa
     4621 tggattctat catggaggca ttatgcaagc gaacgaaatc tataaatcct tagaagaaaa
     4681 aaatatatcg gcaagaatgt tggcttcggc tttaggggta actaaccaat ctgtttctga
     4741 ggtcataaga aatggacgag gaagcaaaag aattgcggag gcaatcgcga aagtgattca
     4801 aaaagattta gttgaagttt ttccgcatta caagaaaaca gattgtcgag acaaaaagat
     4861 agctgaattg aaagagatgc tcggagtggg ttgaaatgga atatatggat ctcaaaagcc
     4921 tgcttaattt tgggttgcca aatatgccaa gaacagtaat agggctgaga aaaaaagcgc
     4981 aaagggatgg ttggcaaacg agaaggcgtc aaggtaaggg tggtggtgtt gaatatgccc
     5041 tacctattga aatccgagca gccatcatga aacggcagtc ggacgagctg gcggaaaaga
     5101 tgccgaaaat gttgccccaa gtcagaccgg ggacggcgat gtcggctcag gcactggctg
     5161 aagcggccaa gctgttgaac gagaaacaac ggtcggtggc ggatgcgcga tgtgcggtgg
     5221 tggcggcggt attggggatt aaatacgaat acgattgctc tgccaaggct gcggtggctc
     5281 agtttttggg cttgctggca gaaggtaaat tggacgcggt cacgcttggg aacttggaaa
     5341 aggccaatga ccgcagccgg tcggcgaagg ttggcgaacg tactttagac ggctggatat
     5401 ctgcttattt gaaagcggaa aacgcgacgg agcggttggt tactttggct ccgaagacga
     5461 cgaaggtggt taagccgatt gagagctacg gttggttgcc gatgtttatg cagtttcaca
     5521 atatcccgtc cgcgccgaaa ctggcgcaca gctaccgccg gtttgtccag tgggcggaag
     5581 cggaaaatat gccggtcaat gatgtgccta acttgagtat ggtgcggcgc gtttgggaca
     5641 agctcccgtt gattatgcag gagcgcggta ggaaaacggg ggcggcttat aaatcgctgc
     5701 tgccttatgt gaaacgtgat tggggggctt tgaagccgaa cgatgtttgg atcggcgacg
     5761 gccacagctt taaggcgaag gtggcacatc cggtacacgg caggccgttt aagccggaag
     5821 tgacggtgat tattgatggt tgtacgcggt ttgtggtggg tttttcggtg tcgttggctg
     5881 aaagttgtgt ggcggtatcg gatgctctgc gtatcggggt caagcatttt ggtttgccga
     5941 ttatctatca ctcggataac ggcggcggcc aaaccggcaa gacgatagac catgaaatca
     6001 cgggtattac gtcccgactg ggtatccggc atgaaacggg tatcgcgggc aacccgcaag
     6061 ggcgcggcat cattgagcga tggtggaaag acaatctgat tgagatggcg cgccagtatg
     6121 agacgtttgc gggcgcgggg atggacagta gcacgaagaa tctgatgtac cgcaagatgg
     6181 aaagtgcttt taatgctttg gaaaaaggca aggatttaac ggaggaacaa cagaaatatt
     6241 tgaaaaaact gccgagctgg tcgcgtttta tcgcggatgt ggtcaagtgt atcgatgatt
     6301 acaacaaccg tccgcacggc gagctgcccc gacatccgga cggtgggcat tatacgccga
     6361 aggcttatcg ggaaatgagg ctggaacagg acggtatcgc gccggatatg ttgtcggcgg
     6421 aagagctggc gacgatgttt atgccgcaag aggtgcgaaa ggtacagcgc ggttggctgg
     6481 atttgttcaa caactcttat ttctcaaccg agctggcgga gtatcacaaa gacgaggtac
     6541 gggtcagcta cgatttggac gacgctgatt ttgtcaatgt atttgatatg gatggcaagt
     6601 tcatcgctaa ggcgcaaatc aacggcaata cccgcgaggc gttcccggtc agccgacgcg
     6661 accaactggc ggaaaaccgc cgaaaaggca aaatcaagcg ggcggaaaat gcaatcaagc
     6721 tcgcgaatgc ggaagtcaat ccggcactgg aacaggcggc agcttgggac gagctgggaa
     6781 atttgggcgg aaacgtcatc gaggcggagt atgcggtatt gccgaaaacg ggcacggacg
     6841 attttgtgct atttgaggcg gatagaagtt aaaacggttt taaacctctt ttaaaaggac
     6901 taaaaaaatg aaacaaatca atcatacatt gcaacaaaaa ctggctgaat ttaaagccaa
     6961 atcaggcatg aaccaaactc aactggcacg cggtatcggt acttcgccgg catccatcag
     7021 tatgtatctg aacggcactt atgcggaaaa aggcggtaat tatgaaacca tcgagccgaa
     7081 aatcgaggcg tttttggaga tgcaggacag taaagcgcaa cgcgaagagc tggtgttggg
     7141 ttttgtatcg actaagacga cccgccgtat tgcggaagtg atgcgcgatg cgcacgaagg
     7201 cggcgaaaca gtggtgatct acggtcaggc gggtttgggc aagactcagg cggtcaaaaa
     7261 ctactgtgat aaaaaccctg cggccatctt gattgaggct aatccgagct ttacggcttt
     7321 ggtcctgatg cgcaagttgg cgacggcggc gaaggtatcg gcgatgggca gcctgaatga
     7381 tttgtttgag tctgtatctg accgcctgcg cgattcgggc cgtctgattg tggtcgatga
     7441 agcggaaaac ctgccgttac gcgcccttga aattgtacgc cgtctgcacg atgagactgg
     7501 ctgcggcttg gtgttgagcg gtatgccccg actggtggcc aacctgcgcg gtaagcatgg
     7561 cgagctggtg caactttata gccgcgtgtc tgttgcgctg aatttgggcg aatctttgcc
     7621 ggatgacgaa ctctttgaga ttgcgaaagc ggctttgcct gatgcggtca agcatctgct
     7681 ccctgatagt gtacaagcgt tgattacggt catcgggttt aatgaaacgc tggagctggt
     7741 gcgcctgatg ggcggtacga cttatccttt gcggcagggt tatacgaaaa acagtcaatc
     7801 ccgtgttgca tacttggaag agattatcgg cagtgaggcg gccggtcggc tggtggaggc
     7861 aatggctccg tgcaatctgt ttataccccg ttgcgagacg gccttgtatg agttgcgaaa
     7921 ccgtaaaatc cgcagtcagt ttgaccggca gacggcaggc ggtacccctg cttatgaggc
     7981 cgttaacgat ttggccttgg cacaccgcct aagcgaccgc catgtgtggc gaattttaaa
     8041 gcaggcggat aaggaagcgg agcaggagaa tttgttttag aatggaatgc catgcagatg
     8101 tatggcattt tattttggag aaaaatatga aaaagtttta ttttgtgctg ctggcgttgg
     8161 gtttggcagc gtgtgggcaa gaacaatcgc agaaagctga tgcggagcag tatttttttg
     8221 ccaataaata tcaatttgca gatgagaaac aggcttttta ttttgaacgc gccgcccgtt
     8281 tccgtgtatt gcaacaaggc cttggcgggg attttgagag gtttttaaaa ggagaaatac
     8341 ctaatcaaga aaatcttgca aagtatcgtg aaaatattac tcaagcagtc gcttattatg
     8401 cggacacgaa tggagatgat gacccatacc gcgtctgcaa acaggctgcg caagatgcag
     8461 aaatcctgat gaagagtatg gtaacaagcg gtggaggcgg tacaactgat ttagataagg
     8521 aaagttatca aaattaccga aaatcaatgc aagaatgccg taaaacaata acggaagctg
     8581 aagccaattt gccgaaaaaa taaaataaac gattctaagg ccgtctgaac aacaggcggc
     8641 ttttttgttg cctactgaca ctgtttcgcc cgctgcaaaa gccatgccgt ttgaaaatgt
     8701 aagcctctga aagtgcattt taatctgatt ttgagggagg ctttaatgag caaaattatt
     8761 tgtctgactg ccggacacag taacaccgac ccgggcgcag tcaacggcag cgaccgtgag
     8821 gcggacttgg cgcaggatat gcgcaacatt gtggcttcaa tcctgcgtaa cgattacggc
     8881 ctgaccgtac gcaccgacgg cgaaggcaaa ggcaatatgc ccttgcgcga tgcggtcaag
     8941 ctgattcgcg gctcggatgt ggcgattgag ttccacacca atgcggcggc gaacaaaacg
     9001 gcgacaggca tcgaagcctt gtccacgccg aaaaataaac gctggtgtca ggtgctgggc
     9061 aaagccgttg ccaagaaaac cggctggaaa ctgcgcggcg aagacggctt taagccggat
     9121 aacgcagggc aacattcgcg cctggcttat gcgcaggcag gcggcattgt gtttgagccg
     9181 ttttttatca g
//
LOCUS       DAXHRP010000076         8944 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.076, whole genome shotgun sequence.
ACCESSION   DAXHRP010000076 DAXHRP010000000
VERSION     DAXHRP010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.076"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            283..1452
                     /gene="prpF"
                     /locus_tag="ACFM72_001270"
     CDS             283..1452
                     /gene="prpF"
                     /locus_tag="ACFM72_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HFC6257831.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            1866..3065
                     /locus_tag="ACFM72_001271"
     CDS             1866..3065
                     /locus_tag="ACFM72_001271"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC6257832.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            3424..4044
                     /locus_tag="ACFM72_001272"
     CDS             3424..4044
                     /locus_tag="ACFM72_001272"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC6257833.1"
                     /translation="MAQFFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(4171..4614)
                     /locus_tag="ACFM72_001273"
     CDS             complement(4171..4614)
                     /locus_tag="ACFM72_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HFC6257834.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            4788..5156
                     /locus_tag="ACFM72_001274"
     CDS             4788..5156
                     /locus_tag="ACFM72_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC6257835.1"
                     /translation="MKPLKRHPALIGLSCDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEETKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            5201..6355
                     /locus_tag="ACFM72_001275"
     CDS             5201..6355
                     /locus_tag="ACFM72_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC6257836.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVLAWLSAVFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(6412..7284)
                     /locus_tag="ACFM72_001276"
     CDS             complement(6412..7284)
                     /locus_tag="ACFM72_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HFC6257837.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDQASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHHCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVENLWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            7369..8181
                     /locus_tag="ACFM72_001277"
     CDS             7369..8181
                     /locus_tag="ACFM72_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HFC6257838.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSCEAGKVMNTLL
                     VYGRDGVRTGLYHKMHLFGFSGLGERYAEADTIRAGGDVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
     gene            complement(8210..8902)
                     /locus_tag="ACFM72_001278"
     CDS             complement(8210..8902)
                     /locus_tag="ACFM72_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC6257839.1"
                     /translation="MQADLAYAAERITHDYPKATGANNTSTVSDYFRNIRAHSIHPRV
                     SVGYDFGDWRIAADYASYRKWNNNKYSVNTKELQRNNNAGNWIELKTENQENGSFHAV
                     SSLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVKHQVHSVETETKIIFTTPTGGAKVG
                     GTIPNKSMSKPAYHERNSISSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFK
                     THEVSLGMRYHF"
BASE COUNT         1932 a         2400 c         2581 g         2031 t
ORIGIN      
        1 tttaatccac tatactgtaa atcgtcattc ccgcgcaggc gggaatccag aaagtggaat
       61 tgaggaaacc tttttatccg atgagtttct gtgcggataa atctggattc ccgcctgcgc
      121 gggaatgacg gggtttaata atctgccgta tcacaacaca gtagccgtag attggggcga
      181 accccgacag tttgcggaat caaacggctt tggtcggagt ggcagcctaa tccactataa
      241 aaatcgtggg cagagcccac gctacataag gagaatctag aaatgccgca aattaaaatt
      301 cccgccgttt actaccgtgg cggtacatca aaaggcgtgt ttttcaaacg ttccgacctg
      361 cccgaggcgg cgcgggaagc gggaagcgca cgcgacaaaa tcctcttgcg cgtactcggc
      421 agcccggatc cctacggcaa gcagatagac ggtttgggca acgccagctc gtccaccagc
      481 aaggcggtga ttttggacaa gtccgaacgc gccgatcacg atgtcgatta ccttttcggg
      541 caagtttcca tcgacaaacc ttttgtcgat tggagtggca actgcggcaa cctcaccgcc
      601 gccgtgggcg catttgccat cgagcaaggc ttggtcgata aaggcaagat tccttcagac
      661 ggcatctgca cagtcaaaat ctggcagaaa aacatcggca aaaccattat tgcccatgta
      721 ccgatgcaaa acggcgcagt tttggaaaca ggcgattttg agctcgacgg cgtaacgttc
      781 ccggcagccg aagtacaaat cgaatttctt gatccagccg acggcgaagg cagtatgttc
      841 ccaaccggca atttggtcga tgaaattgat gtgccgaata taggccgttt gaaagccacg
      901 ctcatcaacg cgggcattcc gaccgttttc ctgaatgccg ccgacttggg ctacacgggc
      961 aaagagttgc aagacgacat caacaacgat gccgcagctt tggaaaaatt cgagaaaatc
     1021 cgcgcttacg gtgcgctgaa aatgggtcta atcagcgacg tatccgaagc tgccgcccgc
     1081 gcgcacacgc cgaaagtcgc cttcgtcgcg cccgccgccg attacaccgc ctccagtggc
     1141 aaaaccgtga atgccgccga catcgatttg ctggtacgcg ccctgagcat gggcaaattg
     1201 caccacgcga tgatgggtac cgcctctgtt gccattgcga ccgccgccgc cgtgcccggt
     1261 acgctggtca accttgccgc aggcggcgga acgcgtaaag aagtgcgctt cgggcatcct
     1321 tccggcacat tgcgcgtcgg tgcagccgcc gaatgtcagg acggacaatg gacggccacc
     1381 aaagcggtta tgagccgcag cgcacgcgtg atgatggaag gttgggtcag ggtgccggaa
     1441 gattgttttt aaattgacgt agcatgggtt tgcccgcgag ccataaacag gtcgtctgaa
     1501 aaacaagtaa acatcaaatc actgaccatt cctttccctt gccctgtggc ggaaggcggc
     1561 aaatcacaag gaagaacacg gaaaccccga taaaagacag cttcccgtat taccgtcatt
     1621 cccgcgcagg cgggaatcta gacctgtcaa tatggaggat tggtagggga aaacaggttt
     1681 cgtgagttct acattctgga ttcccgccac agcctgtcct cgcgtaggcg gggacggaat
     1741 aacgatagaa aatgcggcat acgctttgcc caaagaggcc gtctgaaaca ccttgcgcct
     1801 gatgtctgcc tttttcagac gaccccacac caaaaaaaca accacaaact acaaggagaa
     1861 acatcatgtc cgaccaactc atcctcgttc tgaactgcgg cagttcatcg ctcaaaggcg
     1921 ccgttatcga ccgaaaaagc ggcagcgtcg tcctaagctg cctcggcgaa cgcctgacca
     1981 cgcccgaagc cgtcattacg ttcaacaaag acggcaacaa acgccaagtt cccctgagcg
     2041 gccgaaattg ccacgccggc gcggtgggta tgcttttgaa cgaactggaa aaacacggtc
     2101 tgcacgaccg catcaaagcc atcggccacc gcatcgccca cggcggcgaa aaatacagcg
     2161 agtctgtttt gatcgaccag gccgtaatgg acgaactcaa tgcctgcatt ccgcttgcgc
     2221 cgctgcacaa ccccgccaac atcagcggca tccttgccgc acaggaacat ttccccggtc
     2281 tgcccaatgt cggcgtgatg gatacttcgt tccaccaaac catgccggag cgtgcctaca
     2341 cttatgccgt gccgcgcgag ttgcgtaaaa aatacgcttt ccgccgctac ggtttccacg
     2401 gcaccagtat gcgttacgtt gcccctgaag ccgcacgcat cttgggcaaa cctctggaag
     2461 acatccgcat gattattgcc cacttaggca acggcgcatc cattaccgcc atcaaaaacg
     2521 gcaaatccgt cgataccagt atgggtttca cgccgatcga aggtttggta atgggtacac
     2581 gttgcggcga catcgatccg ggcgtataca gctatctgac ttcccacgcc gggatggatg
     2641 ttgcccaagt ggatgaaatg ctgaacaaaa aatcaggttt gctcggtatt tccgaacttt
     2701 ccaacgactg ccgcaccctc gaaatcgccg ccgacgaagg ccacgaaggc gcgcgcctcg
     2761 ccctcgaagt catgacctac cgcctcgcca aatacatcgc ttcgatggct gtgggctgcg
     2821 gcggcgttga cgcactcgtg ttcaccggcg gtatcggcga aaactcgcgt aatatccgtg
     2881 ccaaaaccgt ttcctatctt gatttcttgg gtctgcacat cgacaccaaa gccaatatgg
     2941 aaaaacgcta cggcaattcg ggcattatca gcccgaccga ttcttctccg gctgttttgg
     3001 ttgtcccgac caatgaagaa ctgatgattg cctgcgacac tgccgaactt gccggcatct
     3061 tgtagccaaa aaagggacga gtccgcaaaa atgccgtctg aaaccccaaa cgcccgatta
     3121 ggctgatgag gattttagac ggcattgttc atttttttgt tatcttgcat ttttgtgcgg
     3181 acggtggaat ttcatcctgt aaacataaat atttgtcgga aaacagaaac cctccgccgc
     3241 catttctacg aaagcaggaa accagcaacg caaagcgaca gggatttgtt ggaaatgacc
     3301 gaaaccgaac gaaccggatt cccgcctgcg cgggaatgac gggattttct gtttttgtgg
     3361 aaatgacggg attttgaatt tcgggcgcac aatacggaaa acatgacgat aaggaaacaa
     3421 accatggcac agtttttcgc tattcatccc gacaatcccc aagaacgcct catcaagcag
     3481 gcggttgaaa tcgtcaataa aggcggcgtg gtcgtttatc cgaccgattc ctgttatgcc
     3541 ttgggctgca aactcggcga taaggcggcg atggaacgca tactctccat ccgcaaaatc
     3601 gatttgaaac accacctgac cctgatgtgc gcagatttga gcgagttggg cacatacgcc
     3661 aaagtcgaca acgtacagtt tcgtcagctt aaagccgcca cacccgggcc ttatactttt
     3721 attttacagg cgacgaagga tgtgccggcg cgcacgctgc acccgaaacg caaaaccatc
     3781 gggctgcgta ttcccgataa tgccattgca caagccctgc tgggggaatt gggcgagccg
     3841 cttttaagct gcaccctgat gctgcccgaa gacggcgaac cattgaccga tccttatgaa
     3901 atccgcgagc gtttggaaca cgccgtcgat ttggtgattg acggcggctg gtgcggaacc
     3961 gagccgacca ccgtcgtcga tatgaccgac ggcacggaat tggtgcgcca aggttgcggc
     4021 gatacggcgg tgttcggttt gtagggaaac cgatgccgtc tgaagcatcg gctgttcaga
     4081 cggcattgcg cgccttgccg gcggcagtcc gaaatgccgg cgcgtatcgc gctcggtcgg
     4141 aatatccgtt tgaaacggca ttttgatgca ttactgcacc gcaatcggaa ttctcggttc
     4201 gtagagcagg tcgtaggtcg gcttgttgag caggtcttgg agcgtgaaac cgtccagata
     4261 cgtgaaaaac gacttcatcg cgccgccgag tatgcccgtc agccggcagg acggtgtaat
     4321 caggcattcg ttgttctcgc ccatgcactc gaccagctgc atcggttcga ggtggcggac
     4381 aaccgagccg atgttgatgc ggtcgggcgg tgcggcaagc cgcagaccgc cgccttttcc
     4441 gcgcacactg tggaggaagc cgcctttgac cagcgcggta acgaccttca tcagatggct
     4501 tttggaaatg ccgtaggtta cggcgatggt actgatgttg accagcgcat cgtcgttgat
     4561 ggcagtgtag ataaggacgc gcagcccgta gtccgtatgt tgtgtcaaat acatgatttt
     4621 ctcggtatgg attgttattc ttatcggtac ggtttaaggt tcacggacaa taccttaatg
     4681 gttgaaaccc tgtccgtcgg ggcggtagaa tgcagcctgt ctgcggcggt atgccgtctg
     4741 aaacatccgc gctaccgttt gagaatttgt tattgtaact caaaatcatg aaaccgttga
     4801 aacgacatcc cgcccttatc gggctttcgt gtgaccacca ccattcgctt tccctgtgcg
     4861 tgcgtctgtt gcggacgccg gaagaaaggc atcgggacga actcgaaccg catttttccg
     4921 aattggaaac ccattttcgc gaagaagaaa ccaagtttgc cccaatttgg cagaatgtcg
     4981 cccccgaatt gaaacaacgt ttcgagaaag accacgcccg actgcggcag atgatggcaa
     5041 gccccgaata cggtaacgcg gcgtggaata ccgcttttgc cacaaccctg cgcgaccacg
     5101 cgcgctttga agaacgcgag ctgtttcccg ccgccgaacc gtttttgccg gcatgattcc
     5161 gttttgcggt aaatatatta atgataaaca aggaacacac atgaaattta ccaagcaccc
     5221 cgtctgggca atggcgttcc gcccatttta ttcgctggcg gctctgtacg gcgcattgtc
     5281 cgtattgctg tggggtttcg gctacacggg aacgcacgag ctgtccggtt tctattggca
     5341 cgcgcatgag atgatttggg gttatgccgg actggtcgtc atcgccttcc tgctgaccgc
     5401 cgtcgccact tggacggggc agccgcccac gcggggcggc gttctggtcg gcttgactat
     5461 cttttggctg gctgcgcgga ttgccgcctt tatcccgggt tggggtgcgt cggcaagcgg
     5521 catactcggt acgctgtttt tctggtacgg cgcggtgtgc atggctttgc ccgttatccg
     5581 ttcgcagaat caacgcaact atgttgccgt gttcgcgctg ttcgtcttgg gcggcacgca
     5641 tgcggcgttc cacgtccagc tgcacaacgg caacctaggc ggactcttga gcggattgca
     5701 gtcgggcttg gtgatggtgt cgggttttat cggtctgatt ggtacgcgga ttatttcgtt
     5761 ttttacgtcc aaacgcttga atgtgccgca gattcccagt ccgaaatggg tggcgcaggc
     5821 ttcgctgtgg ctgcccatgc tgactgccat gctgatggcg cacggtgtgt tggcttggct
     5881 gtctgccgtt tttgcctttg cggcaggtgt gatttttacc gtgcaggtgt accgctggtg
     5941 gtataaaccc gtgttgaaag agccgatgct gtggattctg tttgccggct atctgtttac
     6001 cggattgggg ctgattgcgg tcggcgcgtc ttatttcaaa cccgctttcc tcaatctggg
     6061 tgtgcatctg atcggggtcg gcggtatcgg cgtgctgact ttgggcatga tggcgcgtac
     6121 cgcgcttggt catacgggca atccgattta tccgccgccc aaagccgttc ccgttgcgtt
     6181 ttggctgatg atggcggcaa ccgccgtccg tatggttgcc gtattttctt ccggcactgc
     6241 ctacacgcac agcatccgca cctcttcggt tttgtttgca ctcgcgcttt tggtgtatgc
     6301 gtggaagtat attccttggc tgattcgtcc gcgttcggac ggcaggcccg gttgagacaa
     6361 accgccgcag atttcgggtc tgggcggttt gcttttcaga cggcagggcg gtcagttgcc
     6421 gtccagccag cggtcgcgtg tggttttggc ttcttcaaaa tagcggtaca gggcttcgcg
     6481 gtcgtcggtg gtcaggatgt ttgccaaaac gtccaactgt ttgcccaagc cttgaaccag
     6541 ttgcagcagg ctgtctttgt tggcaaggca gatgtccgcc cacacggcgg gatgaccgga
     6601 ggcgatgcgg gtgaagtccc gaaagcccgt ggcggcgaat ttcagatatt cctgtccgtc
     6661 ggggtggtcg agaatctggt ggacataggc gaaggcggtc aggtggggca tatgggagac
     6721 ggcggcgaaa accgcgtcgt ggcgttgcgc gtccatcgta taaatttccg caccgaccgc
     6781 gtgccacagg ttttctacca aggcaatgcc gtctgaatgt tcgccgccgt gtggcgtgat
     6841 gatgagtttt ctgtggcgga acagcccgaa ctgcgcggct tgcgcaccgc ttctgtccga
     6901 accggcaatt gggtgggcgg cgatgcagtg gtgcaggcgg tcgggcagac agcggcggaa
     6961 ggcttcgatg accgaagatt tggtgctgcc gacatcggaa atccaagtgt gttccggcaa
     7021 aacggggcgc agcgcggtca aaatggcggg aacggtggcg acgggcgtgg caatcagtac
     7081 caagtccgca ccgccgatgc tgtccgcgtc gatggcaacg gaagcctggt caatcacgcc
     7141 gcgttccaat gcacgttcga ggttgtcgcg gtcggtgtcg ataccggtaa cggtgcggac
     7201 gagtccctgc cttttgaggt cgagaacgaa cgaaccgccg atcagcccta caccgatgag
     7261 ggcaatatgg ttcaaaatgg gcatttgtgt aaacggtttt cgcaaagtac cgtcatggta
     7321 gcctatcggc ggaatatgcc gcaaggtcgg caggaaaaag gagaagaaat ggacaaaatc
     7381 agagttgccg ccgtgcagat ggtgtcgggc gtgtcgccgg aaaccaacgt cgccgccatg
     7441 aaacgcctgg tcgcacgggc ggcggagcag ggtgcggatt gggtgctgct gcccgaatat
     7501 tgggtgctga tgggcgcaaa cgataccgac aaactcgcgc ttgccgagcc tttgggcggc
     7561 ggacgctttc agacggcatt gagcgaaacg gcgaaagaat gcggcgtggt gctgttcggc
     7621 gggactgtgc cgctgcaaag ctgcgaggcg ggtaaagtga tgaatacgct gttggtgtac
     7681 ggacgggacg gcgtaaggac ggggctgtac cacaaaatgc acctcttcgg tttttccggt
     7741 ttgggcgaac gctatgccga agccgatacc atccgcgcgg gcggggatgt gccgcacttg
     7801 tcggcagaag gcgtgccggt ggcggcgggc atttgttacg atgtccgctt tcccgaattt
     7861 ttccgacgcc agttgccgtt tgacgtattg atgctgcccg ctgcgtttac gcacacgacg
     7921 ggcaaggcgc attgggagct gctgctgcgc gcgcgtgccg tcgaaaacca atgttacgtc
     7981 gtggcggcgg cacagggcgg tttgcacgaa aacggacggc gcacgttcgg acacagcatg
     8041 attgtcgatc cgtggggcga cgtgttggac gtattgcccg agggcgaagg cgttgttacg
     8101 gcagacatcg atgccaaccg cctgaacagc gtccgcaacc gcctgcccgc cttgaaatac
     8161 cgggttttgg atgccgtctg aaggttcaga cggcatcggt gtcggggaat cagaagtggt
     8221 agcgcatgcc caatgagact tcgtgggttt tgaagcgggt gttttccaag cgtccccagt
     8281 tgtggtaacg gtatccggtg tccaaggtca gcttgggcgt gatgtcgaaa ccgacaccgg
     8341 cgatgacacc aagacccacg ctgctgatgc tgtttctttc gtgataggca ggtttgctca
     8401 tcgatttgtt tgggatcgtg cctccaactt tagcgcctcc cgttggtgta gtgaaaataa
     8461 tcttggtttc tgtttccacc gaatgaacct gatgtttaac gtgtccgtag gcgacgcgca
     8521 caccgatata gggtttgaat ttatcgaatt tatcgttgag tttgaaatcg taaatggcgg
     8581 ataagccgag cgatgagacg gcgtggaagc tgccgttttc ctgattttcc gtcttcagtt
     8641 ctatccagtt gccagcgtta ttgtttcttt gcaactcttt tgtgttgacg gaatatttat
     8701 tgttgttcca ttttctgtaa ctggcataat ctgccgctat cctccagtcg ccgaagtcgt
     8761 agccgaccga cacccggggg tggatggaat gcgcacggat gtttctgaaa taatcgctta
     8821 ctgtgcttgt gttgtttgca ccggttgctt tcggataatc gtgggtaatg cgttcggcgg
     8881 cataagctaa atccgcctgc acataatacg ggctgcgccc gctgtcttca cttgccgcct
     8941 gcgc
//
LOCUS       DAXHRP010000077         8931 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.077, whole genome shotgun sequence.
ACCESSION   DAXHRP010000077 DAXHRP010000000
VERSION     DAXHRP010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8931
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.077"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..397)
                     /locus_tag="ACFM72_001279"
     CDS             complement(<1..397)
                     /locus_tag="ACFM72_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element IS1016C family transposase"
                     /protein_id="HFC6257840.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFY
                     RKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRV
                     YTVIVDNAKSETLLPVIKKKIMPDSIVYTD"
     gene            complement(630..2687)
                     /gene="ppk1"
                     /locus_tag="ACFM72_001280"
     CDS             complement(630..2687)
                     /gene="ppk1"
                     /locus_tag="ACFM72_001280"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HFC6257841.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDQNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKREHKRCPQRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELAQEGIHFYRRRNWTDTQKKWIENYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPAVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGLITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRATPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(2856..3299)
                     /locus_tag="ACFM72_001281"
     CDS             complement(2856..3299)
                     /locus_tag="ACFM72_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HFC6257842.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAVNAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(3306..3821)
                     /locus_tag="ACFM72_001282"
     CDS             complement(3306..3821)
                     /locus_tag="ACFM72_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC6257843.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNNRGTFPTYDELDLMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GTDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPATPKRIRQ"
     gene            4091..6721
                     /gene="leuS"
                     /locus_tag="ACFM72_001283"
     CDS             4091..6721
                     /gene="leuS"
                     /locus_tag="ACFM72_001283"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HFC6257844.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYANFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAAGKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFATKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            6950..7741
                     /locus_tag="ACFM72_001284"
     CDS             6950..7741
                     /locus_tag="ACFM72_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DpnI domain-containing protein"
                     /protein_id="HFC6257845.1"
                     /translation="MNLFFDTELGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMKR
                     FANNKPVADLFCPNCHEQYELKSKNQKTIGNIVPDGAYHTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKGWLLAVMKCIDQLPEEFTLSQMYGFEDKLSIQ
                     FPQNNHIRDKIRQQLQILRDQNTIEFIGRGLYKKIDKLPPTSKAF"
     gene            7708..7878
                     /locus_tag="ACFM72_001285"
                     /pseudo
     CDS             7708..7878
                     /locus_tag="ACFM72_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
     gene            7871..8002
                     /locus_tag="ACFM72_001286"
     CDS             7871..8002
                     /locus_tag="ACFM72_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl-tRNA synthetase"
                     /protein_id="HFC6257846.1"
                     /translation="MRNFDKLAEEAAEHAAEGAVKFIDGKPAKKIIAVPGRLANIVV"
     gene            8025..8931
                     /locus_tag="ACFM72_001287"
                     /pseudo
     CDS             8025..8931
                     /locus_tag="ACFM72_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225798.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
BASE COUNT         2158 a         2290 c         2467 g         2016 t
ORIGIN      
        1 tatcggtata aacaatgctg tccggcatga ttttcttttt gatgacaggg agtaacgttt
       61 cagacttggc attatctacg ataacggtat agacccgtcc gttgcgtttc agaatgccga
      121 agacaaccac ttttcctgcc gcaccgcgac cacgtctgcc tttacgccgt ccgccgaaat
      181 cgctttcgtc cggctcgaca gggccctcaa aaacctcatc ggcagccaag gccaaatgat
      241 ggttgataac cgtgcggatt ttacggtaga acagtgctgc cgaattggga tggataccca
      301 aaatatcggc ggcagaacgg gcggtaactt ccagtacaaa aaaacggagc agttctttct
      361 gtactttttt ctttaatttg cagtgcgtta tcttcatatt tcgagggtaa catatctgct
      421 aatctagtac agcccctaaa atttaatcca ctataatgcc gtctggaatg cggcggcttg
      481 gggttgggag cgtatagggg aagtgcttgt gcaggaatgg cgaaggtgtg tttttgactc
      541 cggtccgccc tgtttagatt gctgtaaaac catgccgtct gaaacggaaa ggtttcagac
      601 ggcatggttt ttgattgggg cggtgcgggt cagcctccga gcagtgtcca caaatcgttt
      661 tgcaggtcgg cttcgctttc gccctcggcg ggcgtggcgc ggatatagcc gccgtcgggc
      721 tgcatcagcc acgcgtgcgt attgtctgcc aatgccattt ccaaaccttc gcggatgacg
      781 cgttttttga gttcgggcgc ggtaatcggc gcggcggttt cgatgcggcg gaagaagttg
      841 cgccccatcc aatccgcgct ggagataaag gtatcgtccg cgccgttgtt gtggaagcaa
      901 tacacgcgcg cgtgttcgag ctgcctgccg atgatggagc ggacgcggat gttttcggac
      961 aagcctttta cacccgggcg caaggtgcac ataccgcgca caatcaaatc gatttgtacg
     1021 cctgccgcgc ttgcccgata cagggcttcg atgacggtcg gttcgatgag cgaattcatc
     1081 ttggcggtaa tccgcgccgg tttgccggct tttgcgtgtt cggtttcgcg tgcgatgcgg
     1141 tcgataacca ttttgtgcag ggtaaacggg ctttggtaga gtttgttcag ccgcccgggt
     1201 ttgcccaagc ctgtgatttc cataaacaat gtgttcacat cggcggtgat ttgttcgtcg
     1261 gctgtgatga ggccgaagtc ggtgtagatg cgcgatgtgc cttggtggta gttacccgtg
     1321 ccgaggtggg cgtaacgctt gagtacgccg tcttcgcggc ggatgaccag tgccatcttg
     1381 gcgtggactt tgtagccgaa cacgccgtac acgacgtgcg cgcccgcctc ttcgagctgc
     1441 ttcgcccagt tgacgttgtt ggcttcgtca aaacgcgcca tcagttcgac gacgacggtt
     1501 acttgtttgc cggcgagtgc cgccttcatc agggcgcgga cgagttcgga gcgcgtgccg
     1561 gtgcggtaaa tcgtcatttt gacggcaagc acggcggggt cggcggcggc ttcgcgcatc
     1621 atttcgacaa cggggtcgaa ggattggtag gggtggtgca gcaggatggg cgactggcgc
     1681 accaaatcga atatggacgc ggttttgccc aaggctttca gtctgcccgg cgtgtgtgtg
     1741 ggaaatttca aatcggggcg gttgactagg tcggggacgg cgttgaggcg cacgaggttg
     1801 accgggcctt tgacctgata gagttcggcg gcggtcagtt tgaattgcgc gagcagaaag
     1861 tcgcggatgt aggcgggaca ggtgtcggcg acttcgagcc gcacgccgtc gccgtattcg
     1921 cggtcgtgca gttcgttttg gatggcggcg cggaggtttt gcaggtcttc ttcgtcaacg
     1981 gtcaagtcgc tgtcgcgcgt caggcggaac tggtggcagc ctttgacgtt catgcccggg
     2041 aagagtttgc cgacgtgggc gtggaggatg gacgacagga agacgaagcc gtgtccgccg
     2101 ccacacagtt cggacggcag gggaacaacg cgcggcagga tgcgtggtgc ctgcacaatc
     2161 gccatccccg aaggcctgcc gaacgcgtct gtgccgtcga gttcgacggc gaagttgagc
     2221 gatttgttca gcgggcgcgg gaaggggtgg gaagggtcga gtccgatggg ggtcagaatc
     2281 ggcagcaatt cgcggtcaaa atagttttca atccattttt tctgtgtgtc tgtccaattt
     2341 cggcggcggt aaaaatggat gccttcttgt gccagctcgg gctgaaggac gttgttgaac
     2401 aggtcgtact ggtgccgtat cagggagcgc gccgcttcgg taacgtcggc gatggtttca
     2461 gacggcattt tgccgttgtc cagcctgcgc tgcgggcagc gtttgtgttc gcgcttcagc
     2521 cacgccatac ggacttcgaa aaactcgtcg aggttggatg aaacgatgca caggaagcgc
     2581 aggcgttcca aaagggggac gttttggtct tccgcctgcg ccaacacgcg gcggttgaat
     2641 gccagcaagc tcagttcgcg gcagaggatg cggttttgtt cgggcataag gttctcccaa
     2701 agatggttgt tgttcggtcg gagcgggcag gcaatgccgt ctgaaggctt ggcggcatct
     2761 gcgccggttt cagacggcat gacgtggcgg acagtctgtt tcaggcatcg gggcaatgtg
     2821 aaaacagata ccggcgcgtg cggtatccgt ctgtttcaaa tcacttccaa cacaaaataa
     2881 tgacgcagtt tttcgtacac cgcatcgctg acgttgatgc agccgttggt cataatcctg
     2941 tcggacacgg acggggaggc gatgcgttcg ttccgccttt ccgacggtat ctgattccaa
     3001 acgcggtgca gggcgaaaag aaaatcaccc tcctgcttga aaccgatgac ttcgccgccg
     3061 tatccgggct tgtcggtact gttcagcgtc agcccgaacg tccccttggg cgtggcaaca
     3121 ccgatgagga cggggtggca ctgacggtcg tcagcgaaac agagttccgc tttggatgta
     3181 tcgacgatga cttttttctt ttgaatataa gcgttgaccg catccggttg cccctgtgca
     3241 tatacggggg caaccattga caggccgcat aatatcccta aaaacaggcg gaacggcatg
     3301 tcggattatt ggcggatacg tttaggcgtt gccggcacga tttcgcggat gatgacttga
     3361 ggctcggctt tgggtgcggg cggcggacag gcggcatctt tcgggaagac ggggttccag
     3421 tagaagctgc gggcaaattt gtctttatcg aaaatcactt tgtattggca agtagtaaca
     3481 tcttccacgc cagaagtgtt ttcaggatcg gtacctacgc cgggggtgtg gaagtggaac
     3541 aggtaatccc attcgcgcac gccgtacata ccttcgtcgt aatgcgggcg gcccaggatt
     3601 ttgtagatgt cgtctttggt caggccgggg cgcatcaagt ccaattcgtc ataggtcggg
     3661 aatgtaccgc gattgttgtc gagcgttacg gaatagggtt tcgggaaaac cggattgtcg
     3721 gtcgtgccgt cggctttgac gttgcttttg gttgcgcagg cagacagaac gcccgccgcc
     3781 aatactgcca agcccggttt gacgatttgt ttgattttca tatgcagaat cctcttttac
     3841 ccgatgcccg tctgcctttt gttcggaaga gccgcatcag gagagtttta aacatttgat
     3901 tttggtttgt aatattagca taaaaaacgt gcgtatcaat aaacgcggtg tatttgtacg
     3961 gcatacggaa taatgcgcgt gcgaatttac gcatcctgcc ggcaatctgc cgattcgccg
     4021 cttccggcaa cctgttataa ttgatgccga ctttattttt ccaacgtttt taagcgaaaa
     4081 cagaatgact atgcaagaac aatatcaacc cgccgccatc gagcctgcgg cgcagaaaaa
     4141 atgggacgac gcccgtattt tcaacgtctc cgaagacgct tccaaaccca aatattattg
     4201 cctctccatg ttcccctatc ccagcggcaa gctgcatatg gggcatgtgc gcaactacac
     4261 catcggcgat gtattgagcc gcttcaaact tttaaacggc ttcaacgtca tgcagcctat
     4321 gggttgggac gcgttcggca tgccggcgga aaacgcggcg atgaaaaaca acgtcgcccc
     4381 tgccgcttgg acgtacgata acatcgaata catgaaaacc cagctcaaaa gcctgggttt
     4441 tgcgattgac tgggcgcgcg aaaccgcaac ctgcaaaccc gaatactacc gctgggaaca
     4501 atggctgttt accaagctgt ttgaaaaagg catcgtttat cgcaaaaacg gcacggtaaa
     4561 ctgggacccg gtcgaccaaa ccgtccttgc caacgagcaa gttatcgacg gacgcggttg
     4621 gcgttcgggc gcgttgatcg aaaaacgcga aatcccgatg tattacttca aaatcaccga
     4681 ttacgccgaa gagctgctca acgacttgga caagctggaa cactggcctg aacaagtcaa
     4741 aaccatgcag cgcaactgga tcggcaaatc tcgcggcatg accgtgcgct ttgctgtttc
     4801 agacgacagc aaacaaggct tggaaggcga ttacgcgaac ttcctgcaag tttataccac
     4861 ccgtcccgac acgctgatgg gcgcgactta tgtcgccgtt gccgccgagc atccgctggc
     4921 aaccgccgca gccgccggca aacccgaatt gcaggcattt atcgccgaat gcaaagcagg
     4981 ttcggttgcc gaagccgata tggcgacgat ggagaaaaaa ggcgtgccga ccggccgcta
     5041 cgtcgtcaac ccgctcaacg gcgacaagct ggaagtgtgg attgccaact atgtattgtg
     5101 gggctacggc gacggcgcgg tgatggcggt tccggcgcac gacgaacgcg attttgagtt
     5161 cgccaccaaa tacaatctgc cgaaaaaaca agtcattgcc gtcggcgaca acgcatttga
     5221 cgaaaaccaa tggcaagaat ggtacggcga caaagaaaac ggcgtattgg tcaacagcgg
     5281 cgacttggac ggcttggatt ttcagacggc attcgacgcc gtcgccgcca agctgcaaag
     5341 ccaaggcgcg ggcgaaccga aaacccaata ccgcctgcgc gactggggca tttcgcgcca
     5401 acgctactgg ggctgcccga ttcccatcgt ccattgcgaa caatgcggcg acgtacccgt
     5461 ccctgccgac caattgccgg tcgttttgcc tgaaaacgtc gtacccgacg gcatgggttc
     5521 gccgctggca aaaatgcccg agttttacga aactgcctgc ccatgctgcg gcggcgcggc
     5581 gaaacgcgaa accgacacca tggacacctt catggaatcg agctggtatt tcttccgcta
     5641 catgtcgcca aaattttcag acggcatggt cgatcctgcc gccgcgaaat actggggcgc
     5701 ggtcgaccaa tacatcggcg gcatcgaaca cgcgattttg cacctcttgt acgcgcgttt
     5761 cttcaccaaa ctgatgcgcg acgaaggtct agtcaatgtt gacgaaccgt ttgaacgcct
     5821 gctgacgcaa ggcatggtcg tttgcgaaac ctactaccgc gaaaacgaca aaggcggcaa
     5881 agattggatc aaccccgccg atgtcgagct gacgttcgac gacaaaggcc gccccatttc
     5941 cgccgtcctc aaagccgacg ggctgcccgt cgtcatcagc ggcacggaaa aaatgtccaa
     6001 gtccaaaaac aacggcgtcg atccgcaaga actgattaac gcctacggcg cggacaccgc
     6061 ccgcctgttt atgatgttcg ccgcaccgcc cgaacagtcc ctcgaatgga gcgacagcgg
     6121 cgtcgaaggc gcacaccgct tcctgcgccg cctgtggcgt accgtttacg aatacttgaa
     6181 gcaaggcgaa gcggtcaaag cgttcgcagg cagccaagac ggtttgtcta aagaactcaa
     6241 agacctgcgc cacaaactgc acgcgaccac tgccaaagtc agcgacgact acggccgccg
     6301 ccagcagttc aacaccgcca tcgccgccgt gatggaattg ctcaaccaat acgacaaaac
     6361 cgacaccggc ggcgaacaag gacgcgccgt cgcccaagaa gtattggaaa ccgccgtacg
     6421 cctgttgtgg cccatcgtgc cgcacatctg cgaaaccctg tggagcgaat tgaacggcgc
     6481 gaaactgtgg gaagcaggct ggccgacagt cgacgaagcc gccttggtca aatccgaaat
     6541 cgaagtgatg gttcaagtca acggcaaact gcgcggcaaa atcactgttg ccgccgacgc
     6601 atccaaagcc gacctcgaag ccgccgcact cgccaccgaa ggcgcggtga aattcatgga
     6661 aggcaaaccg gcgaagaaaa tcatcgtcgt accgggcaga ctggtgaaca tcgtcgtcta
     6721 accgctttta aggtttagcc acacggataa aggccgtctg aaaactggaa aacagggttt
     6781 cagacggcct ttttaaggca gattgggttg tctgcattac agacctcaaa tatagcggat
     6841 taactttaaa ccagtacggc gttgccccgc cttgccctgc tgtctgcggc ttcgtctcct
     6901 tgtcctgatt tttgttaatc cactaaaact taatctcaaa atccaaaaca tgaatttatt
     6961 tttcgatact gaattgggaa agcaacaaaa taaagcaacc cacaaaatcc gtgtaatgag
     7021 cgaggcttgg ctggaaaaaa acggctactg tccctgttgc ggaagcaagc cgatgaagag
     7081 atttgccaat aacaaacctg ttgcagacct cttttgccca aattgccacg agcaatatga
     7141 attaaagagt aaaaatcaaa aaaccatagg caacatcgtg cctgacggtg catatcacac
     7201 catgttggag cgcatccggt cagataccaa ccccaacttt ttctttcttg catataaaaa
     7261 agcggattac tccatacggc aattggtgct tgtacccaaa catttcatca cgccggatat
     7321 gattattccc agaaataaag gcattaaaaa ccggccgcac cacattatgt gttccatcaa
     7381 tctcgcccct ttgcctgaaa gcggaaaaat attcttaata gacgattccc gcattatcga
     7441 acccgaaacc gttctgaaaa aatggcaatc caacctgttt ttacgcaacc aaaatgcgga
     7501 gcgtaaaggc tggcttttgg ctgttatgaa atgtatcgac caactccccg aagaattcac
     7561 attgtcgcaa atgtatggat ttgaagacaa actatccatc caatttcccc aaaacaacca
     7621 tatcagagac aaaatccgcc aacagttgca aattttgcgc gaccaaaata cgatcgaatt
     7681 cattggtcgc ggactttaca aaaaaatcga caaattgccc ccgacttcca aggcgtttta
     7741 atttcaaatc atgatactga attcacaagg gatatttatt cttctgctat tctgaaaaca
     7801 gttgaagtac agcgcaatat tgccgcaaaa ggcagcagcc gtaaaaaagt cggggaatta
     7861 ttggcaattt atgcgtaatt tcgacaaatt ggctgaagaa gctgccgaac acgccgctga
     7921 aggcgcggtg aaattcatag acggcaagcc tgccaagaaa atcatcgccg taccgggcag
     7981 actggcgaac atcgtggtgt aaatcttttt aaaaacatca aacaatgtta agatgccgtc
     8041 cgaaatccgt tttagattca gacggcattt tttaaattta attttttaag gggtaagcct
     8101 aatatgaaat ttccttcctt ccttccttta aacggatact ctgcctgtcg gcagtaatct
     8161 cggtattggg ggcttgtacg gtcgttgctg atgtttacgg tcaggattcc gccacaatga
     8221 acgctgcggc tgccaaagat tatatgaaaa cggttgagtt gaacaagtct gccggcaatg
     8281 tcgataccac atccagaaca gcccgcaggg tgcaggcagt atttcgacgt atgctgcctt
     8341 atgccgatgc ggcaaataat accggccata ggtttgactg gaaaatgacg gttttcaaaa
     8401 acgatgagct gaacgcgtgg gcgatgcccg gtggaaaaat ggcgttttat acggggatag
     8461 tcgacaaact caagctgacc gatgacgaaa ttgccgccat tatggggcat gaaatgacgc
     8521 acgccctgca tgaacacggt aaaaataagg tcgggcaaca aattttgacc aatacggcgg
     8581 cgcagatagg cacgcagatt atattagaca aaaaaccgga cactaatccg gaattggtcg
     8641 gattgggtat ggatattttg gggacgtacg gtcttacctt gccttatagc cgcagcttgg
     8701 aagaagaagc cgatgagggg ggaatgatgt tgatggcgca ggcaggctat catccggcgg
     8761 ccgctgtcag ggtttgggaa aaaatgaatc aggaaaacga ccaaaacggc tttatttatg
     8821 ctattacctc tactcatccg acaaacaatg cccgtataga aaacctaaaa cggttgttgc
     8881 cgaccgttat gcctgtttat gagcaaagtg tcagaaataa ggggcgcgtt a
//
LOCUS       DAXHRP010000078         8883 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.078, whole genome shotgun sequence.
ACCESSION   DAXHRP010000078 DAXHRP010000000
VERSION     DAXHRP010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.078"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(312..1754)
                     /gene="aldA"
                     /locus_tag="ACFM72_001288"
     CDS             complement(312..1754)
                     /gene="aldA"
                     /locus_tag="ACFM72_001288"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HFC6257847.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRGRADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1862..2779)
                     /locus_tag="ACFM72_001289"
     CDS             complement(1862..2779)
                     /locus_tag="ACFM72_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6257848.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRCRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWDLPPNLRGLAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFADGA
                     HQVNRLTDALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            2952..3752
                     /locus_tag="ACFM72_001290"
     CDS             2952..3752
                     /locus_tag="ACFM72_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC6257849.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            3801..4577
                     /gene="mlaE"
                     /locus_tag="ACFM72_001291"
     CDS             3801..4577
                     /gene="mlaE"
                     /locus_tag="ACFM72_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HFC6257850.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLSLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            4628..5122
                     /gene="mlaD"
                     /locus_tag="ACFM72_001292"
     CDS             4628..5122
                     /gene="mlaD"
                     /locus_tag="ACFM72_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HFC6257851.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5159..5749
                     /locus_tag="ACFM72_001293"
     CDS             5159..5749
                     /locus_tag="ACFM72_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HFC6257852.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            5806..6084
                     /locus_tag="ACFM72_001294"
     CDS             5806..6084
                     /locus_tag="ACFM72_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HFC6257853.1"
                     /translation="MHTELNNGTLHISGDITVKTLTGEAFERFQQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6081..6908
                     /locus_tag="ACFM72_001295"
     CDS             6081..6908
                     /locus_tag="ACFM72_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HFC6257854.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7033..7395
                     /locus_tag="ACFM72_001296"
     CDS             7033..7395
                     /locus_tag="ACFM72_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HFC6257855.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7395..7778
                     /locus_tag="ACFM72_001297"
     CDS             7395..7778
                     /locus_tag="ACFM72_001297"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC6257856.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            7775..8263
                     /locus_tag="ACFM72_001298"
     CDS             7775..8263
                     /locus_tag="ACFM72_001298"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HFC6257857.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKMANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8346..8474)
                     /locus_tag="ACFM72_001299"
     CDS             complement(8346..8474)
                     /locus_tag="ACFM72_001299"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HFC6257858.1"
                     /translation="MAGVTVGRGSVVGAGAVVTKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(8480..8860)
                     /locus_tag="ACFM72_001300"
     CDS             complement(8480..8860)
                     /locus_tag="ACFM72_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HFC6257859.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
BASE COUNT         1993 a         2538 c         2325 g         2027 t
ORIGIN      
        1 ttgggcattc cttaaattac ccgtgtatcg ctgtaaatct tagagatggc ggaatatagc
       61 ggattaacaa aaaccagtac agcgttgcct cgccttagct cgaagagaac gattctctaa
      121 ggtgctgaag caccgagtga atcggttccg tactatctgt actgtctgcg gcttcgttta
      181 aatttaatcc gctatacaaa gacaaaaaca tcgacctcgg tcatgactga ttgccggtga
      241 agcaataaaa atgccgtctg aacctgaaaa cgggttcaga cggcattttc tatcagggtt
      301 ttaaagcggc attaaatgtc ggtttccaga taaacgactt gggtttgcag atattcttcc
      361 aaaccgtgtt tgccgtccgc gccgccgata ccggattttt tccaaccggc gtggaaaccc
      421 tgcatcgctt caaagttttc gcggttgatg taggtttcgc cgaattgcag gcggcgggta
      481 acgtagaagg cttcgtttaa attagtcgta taaacagaac tggtcagacc aaactcgcaa
      541 tcgttagcca gtgcaatcac ttggtcgagc gtgtcgaaag cggaaacggg cagaacgggg
      601 ccgaaggttt cttctttcat aatgtccata ctgttgtcgg tgtcggtcag cagggtaggc
      661 tcgaagaaat agccgcgtcc ttcggcgcgt ttgccgccgc aaaccagttt cgcaccttgt
      721 ttgactgccc gttccacttt ttcggcaacg gctttgacgg cgcgctcttc aatcagcggg
      781 cccatttcca gcgcgccggc ttcggcttcg gcagggttgc cgtagcgcac gcctttcatc
      841 gcggcggtca ttttttcgat aaacgcgtct ttcaggctgc tgtggacata gacgcgctcg
      901 gcgcagttgc agatttgacc ggtgttgccg acgcgcgaag ccaagatgga tttaaccgcc
      961 aaatccaaat ccgcgtcttt caaaacgatg gcgggggctt tgccgccgag ttccagcgaa
     1021 actttggtga tgttggcgga agcggcttcc atcacttggc ggcctgcttc gacggagccg
     1081 gtcaggctga ccatatcgac ttgcggatgg gcggacaagg cgttgccgat ttccgcgccg
     1141 ggaccgttca ccacgttgaa cacgccggcg ggcagtccga ccgcatcgac gatttcggcg
     1201 aagatgtggc agttgatcgg ggttacgctg ctgggtttga cgacgatggt gttgcccgtt
     1261 accaaagcgg gccccatttt gcgggcaatc aggaagaagg ggaagttcca cggcaaaatg
     1321 ccggcaatca cgcccagcgg acgtttgaac aataaaatat tttcacgcgg gcggtcgctt
     1381 tggatgattt cgccttcgta acggcgcgcc cattcggctt ggtaatcgag atagtcggcg
     1441 gtgaacatca cttctacgcg cgccaagtct ttggttttgc cgccttcggc aacgatggtg
     1501 tcggtcagct cgtcggcgcg tccgcgtatg ccttgggcga ttttgcgcaa atacgcgccg
     1561 cgttcgaccg caggcaggcg ttcccaagcc ggttgcgccg cgcgtgccgc cgccacagct
     1621 cggtcaacgt ctgcttttcc gcctttgggt tcgcgggcga tggtttcttc ggtggaaggg
     1681 ttcaatacgt cgcgccattc gccgttgaag tcgttttcaa agcgtccgtt gatgtacatg
     1741 gccaattgtt tcatttcggg ttctccagtt ttgtagtcag atgtagtttt agtttattcc
     1801 caaataaatt accgtacaag tttctttaca cgcggatttc gggtttgaaa tcaaatgcgg
     1861 cttaccggtt ttcttttttg gtttccgccg gcgtgctgcc gaaatattgc ctgaatgcct
     1921 gagtaaagct ggaaacgtgg cggtagccgc ataaatatgc agtttcgcct atgcttttcc
     1981 ccccgttttg caacagatag agcgcgtgct gcatttgttt gtggtgcagc cactcgcttg
     2041 cggtaatgcc gaaatggtcg cgcatacggc gttgcagcgt cctttcgctg atgttcagcg
     2101 cgtctgtcag ccggttgact tggtgtgcgc cgtcggcaaa cgcggcattt agggtgcggc
     2161 tgaagtcttc agacggcata gcgtctgctt ccgccgtttg ccccgccgcc ggcccgatgc
     2221 cgtctgaaac cgtgtcccac aagtccgaca gcagccgcaa cacgtccgcc tcgcggcgca
     2281 atgtttcgcc caaatgcccc tttgggacgg ctttcaggca ggatgccgcc aagccgcgca
     2341 ggttcggggg caaatcccat atcctgaccg gttcgcggta aagcaggggt gcgaaacgcg
     2401 cgtattccgg acgcagcagc cattgttcca tacctttaat ggtcattttg accgttttgc
     2461 cgcctcggta aagatagcgg ctgaacagga cttcttcccc gacagcaatt aggacaatct
     2521 tgccgccgtc cgcatcgatt tggaagcggc agcggttgat gccgaagtcc aaactgcctt
     2581 ccagcaagag cacgaacgac acataaggtt cggcgaggcg gctgctgcaa aaatcacacc
     2641 gtgccgttac tgtgccgccg tggatggaaa tgccgttgga caaagtatcg aaacggtagc
     2701 tgccctccac atagctgccg ccgccgcttt tgactagatt gacgaaccgg ctgctgttca
     2761 aatgttctgc tttttccata gttttctgat aaaggttatc atttgaaaga taacattttt
     2821 cgccacagca aacaatccgc cgccgacaac ggcattttca caacatttac cgtccgtatg
     2881 ccgtctgaaa attgcccgtc ttcccgataa gccttaaaat acacgccgtc aaacctaccg
     2941 tccgtccgta catgagccca tcccccttta tcgaaatgaa agacgtcgcc ttcgcgtatg
     3001 gcgaccgccc gattctgaag aacatcaatt tcagcattcc gcaaggcaat tttgctgccg
     3061 taatgggcgg ttcgggcagc ggcaaaacca cgctgatgcg actgattaca ggacagattc
     3121 gtccgcagtc cgggcaggtt ttgattgaag gacgggattt ggcgggcttt tcggctgacg
     3181 agttgtatga acaccgccgc cgtatgggcg tattgttcca acacggcgcg ctgtttactg
     3241 atttgtcggt attcgacaat atcgcttttc cgatgcgcga actgacgcgc ctgccggaag
     3301 cggtgattcg ggatttggtt ttgttgaaat tgaacgcggt cggtctgcgc ggtgtggaaa
     3361 acctgatgcc gtccgagttg tccggcggga tgtcgcgccg cgtcgcgctt gcccgcacga
     3421 ttgcgctcga ccctgaaatt atgttgtacg acgagccgtt taccggcctc gatccgattt
     3481 ccttgggcgt gattgcccac ttgatcagcc gcgtcaacaa ggctttgcgt tcgaccagta
     3541 ttatggtaac gcacgacatt gaaaaatctt tggaaatcgt cgatcaggtg attttcttgg
     3601 cgcacggcga aattatgttc tccggctcgc cgcaggaaat gcgcgaactg gattcgcctt
     3661 gggtgcgcca gtttgtcggc gggctggcag acggccccgt agcataccgt tatccggcgc
     3721 aaacgtcgtt gcagcaggat ttgctcgggt aaattgagcc ggtgccgtct gaaaccgttg
     3781 aactttacat atagaaattt atgaatttta tccgttccgt cggggcgaaa accctcggcc
     3841 ttattcaatc cctcggcagt attacgctgt ttctgctgaa cattctggcg aagtccggta
     3901 cggctttcgt ccgtccgcgc ctgagcgtgc gccaagtgta ttttgccggc gtgctgtcgg
     3961 tgctgattgt tgccgtttcg gggctgtttg tcggtatggt cttgggtttg cagggctata
     4021 cgcagttgtc gaaattcaaa tccgccgata ttttgggcta tatggttgcg gcttcgctgt
     4081 tgcgcgaact gggtccggtg ttggcggcga ttctgtttgc cagcagcgct ggcggtgcga
     4141 tgaccagcga aatcggtttg atgaaaacga ccgaacagct cgaagcgatg aacgtgatgg
     4201 cggtaaaccc tgtcgcccgc gtggttgcgc cgcgcttttg ggcgggcgtg ttttccatgc
     4261 cgcttttggc ttcgattttc aacgtggcgg gtattttcgg cgcgtatttg gtcggtgtaa
     4321 gctggctgag cttggacagc ggcattttct ggtcgcaaat gcagaacaac atcacgatac
     4381 attacgatgt aatcaacggt ctgatcaaat ccgccgcgtt cggcgtggcg gtaacgctga
     4441 ttgccgtgca tcagggcttc cactgcgtcc cgacctcgga aggcattttg cgcgccagca
     4501 cgcgcacggt ggtttcgtcc gccctgacga ttttggcggt cgattttata ttgaccgcgt
     4561 ggatgtttac agattgacag ggcgtctgaa gacgaaacgc ggaacatcgg atattcaagg
     4621 aactttaatg aaaaagaaca tattggaatt ttgggtcgga ctgttcgtcc tgattggcgc
     4681 ggcggcggtt gcctttctcg ctttccgcgt ggcgggcggc gcggcgttcg gcaattccgg
     4741 caagacttat accgtatatg ccgatttcgg cgacatcggc ggtttgaagg tcaatgcccc
     4801 cgtcaaatcc gcaggcgtat tggtcgggcg cgtcggcgct atcggacttg acccgaaatc
     4861 ctatcaggcg agggtgcgcc tcgatttgga cggcaagtat cagttcagca gcgacgtttc
     4921 cgcgcaaatc ctgacttcgg gacttttggg cgagcagtac atcgggctgc agcagggcgg
     4981 cgacacggaa aaccttgctg ccggcgacac catctccgta accagttctg caatggttct
     5041 ggaaaacctt atcggcaaat tcatgacgag ttttgccgaa aaaaatgccg acggcggcaa
     5101 tgcggaaaaa gccgccgaat aaacgtatgc catcatattc aaactaggac acttaatcat
     5161 gaaaaaatcc tccctcatca gcgcattggg catcggtatt ttgagcatcg gcatggcatt
     5221 tgccgcccct gccgacgcgg taaaccaaat ccgtcaaaac gccactcaag tattgagcat
     5281 cttaaaaagc ggtgatgcca acaccgcccg ccaaaaagcc gaagcctatg cgattcccta
     5341 tttcgatttc caacgtatga ccgcattggc ggtcggcaac ccttggcgca ccgcgtccga
     5401 cgcgcaaaaa caagcgttgg ccaaagaatt tcaaaccctg ctgatccgca cctattccgg
     5461 cacgatgctg aaattaaaaa acgccaacgt caacgtcaaa gacaatccca tcgtcaataa
     5521 aggcggcaaa gaaatcatcg tccgcgccga agtcggcgta cctgggcaaa aacccgtcaa
     5581 catggacttc accacctacc aaagcggcgg taaataccgt acctacaacg tcgccatcga
     5641 aggcgcgagc ctggttaccg tgtaccgcaa ccaattcggc gaaattatca aagcgaaagg
     5701 cgtggacgga ctgattgccg agttgaaggc taaaaacggc agcaagtaat ccataagcca
     5761 tgccgccaga ctgaagatgg catggatttt ttcctaccga acactatgca tacagaactc
     5821 aacaacggaa cactgcacat cagcggcgac atcaccgtca aaaccctgac cggggaggct
     5881 tttgagcgtt tccagcagca atgccgtctg aaagaaacca ttgccgtcga tttcggcggt
     5941 gtcaaacgtg ccgattccgc ctgcgtgtcg ctgctgctcg aagtgctgcg cggctgcaaa
     6001 ggcagcgtca ggctgaccgg cattcccgaa tccgtgcgcg cgctgtccga actgtacgaa
     6061 atcaaagact ggctgaaatc atgaaaaaaa ccgcctatgc cttcctcctg ctgatcgggt
     6121 tcgcttccgc ccctgcattt gccgaaaccc gccccgccga cccttatgaa ggctacaacc
     6181 gcgccgtttt caaattcaac gaccaagccg accgctacat tttcgcccct gccgcgcgcg
     6241 gctaccgcaa agttgcgccg aaacccgtcc gcgccggcgt gtccaatttt tttaataacc
     6301 tgtgcgacgt ggtcagcttc ggcagcaata tcttgcgctt ggacatcaaa cgcgcaagcg
     6361 aagaccttgt ccgcgtcggc atcaacacca ctttcggttt gggcgggctt atcgacatcg
     6421 ccggcgcggg cggcattccc gacaataaaa acaccttggg cgacacgttt gcttcgtggg
     6481 gatggaaaaa cagcaattat ttcgtgttgc ccgtcttagg gccgtccacc gtccgcgacg
     6541 cgctcggcac gggtattacc tccgtttatt cgcccaagaa tatcgtcttc cgcacccctg
     6601 tcggacgctg gggcacgact gccgtatccg ccgtcagtac gcgcgaaggc ctgctcgatt
     6661 tgaccgacag cctggacgaa gccgccatcg acaaatacag ctacacgcgc gacctctata
     6721 tgaaagtccg tgcgcggcag accggtgcaa cacctgccga aggtacggaa gataacatcg
     6781 acatcgacga attggtcgaa agtgccgaaa ccggcgcggc ggaaactgcc gttcaagaag
     6841 attccgtatc cgaaacacag gcagaagcag caggggaagc cgaaacgcaa cctggaacac
     6901 aaccttaaag ccatgccgtc tgaaaatccg tgttcggacg gcattccctt ctgtcggaac
     6961 ggacagtccg aaaccacaga ttgggctata atctcttttt tgcgcatacc gcgcgacagc
     7021 aaaggaaaaa ccatgtacga agtcaaccgc agcgtattcg tcctcatccc tttagaacct
     7081 ttttggaact ggctgcaaac cctgccgggc aaccacctcg acggactgac tcttgaagac
     7141 atccaagccg acgccaattc ctaccttgtc cgcccgtgcg aaaccgccga cgaagtatgg
     7201 gacgaaatcg aagcccgttt tgaagacatt ttcgccgccg aacttgccga ctggtgcgaa
     7261 gacgaacgcg agtggcctgc gctcgatgcc gacattttca acgaatggtt cgacatccag
     7321 ctttctaccg tcatcaccga cctcgaacac gaaccgcttg cccgcgaagc cttccaaccc
     7381 atcaacctga actgatgaag ctgaccgtcc gcaactacca tctcgacggc tacggccatg
     7441 tcaacaatgc gcgctacctc gaatttttcg aagaagcgcg ctgggcgttt tttgaagaac
     7501 gcggactgct gcacgagttg gcaggcctca tactgattgt cgcccgcatc gacatccgat
     7561 acagccgccc cgccgtcgaa ggcgacgtat tgcagttttc atgccgcctg aaaacccccg
     7621 gcacgcgccg tattgtgctg acccagacga ttacactgcc aaacggcaaa accgccgcag
     7681 aagccgacat caccctgatg cccgtccacg ccgccacaca acgcaccgtc agcctgcccg
     7741 ccacccttgc ccgcgcattg gaagccttgt ccgaatgaaa aaaatactca ccgccgccgt
     7801 cgtcgcactg atcggcatcc tccttgccat cgtcctcatc cccgacagca aaaccgcgcc
     7861 cgccttctcc ctgcccgacc tgcacggaaa aaccgtttcc aacgccgacc tgcaaggcaa
     7921 agtaaccctg attaattttt ggtttccctc ctgtccgggt tgtgtgagcg aaatgcccaa
     7981 aatcattaaa atggcaaatg actataaaaa caaaaacttc caagtccttg ccgttgcaca
     8041 acctatcgat ccgatagaaa gcgtccgcca atatgtcaaa gactacggtt tgccgtttac
     8101 cgtcatgtat gatgcggaca aagctgtcgg acaggcgttc ggcacacagg tttatccgac
     8161 ttccgtcctt atcggcaaaa aaggcgaaat cctcaaaact tatgtcggcg aacccgattt
     8221 cggcaaactc taccaagaaa tcgataccgc gctggcacaa tagcgatgcc gtctgaagcg
     8281 caaaaaaaac agaaacgatg ttcctgtttt ttcagatcat ccgccccgac acgttcagac
     8341 ggcattcaac cttccggcag attctttttc accactgccg gattgcctgc cgccaaagag
     8401 tagggcggaa tgtcttttgt aaccaccgcg cctgcgccca cgaccgaacc gcgtccgacg
     8461 gttacgcccg ccattacaat caccctgtgc cccggccaga catcgtcctc caacgtaatc
     8521 ggacggattt ccgtgtagcc ctcaaagcgt tttttgaacg gtcaaacttg tggttatttg
     8581 aataaaacag acattccggc tccatcatca catttttgcc gaccaccagc ccacggcaga
     8641 tttcacagtt tgccccgatg cccgagccgt cgcccaaaac cgtatccgga aacacatacg
     8701 ccccgcgttc gatattgacc ccgcgtccga tatgcggaga aacccgccgc gccaaaaaac
     8761 cgcgcacccg tctgccgacg atgccgatgc cgcgcatatg tgacggcggc aaccccgaac
     8821 cggcaaaacg cagcagcagg aaaaagaatt ttgatcccat caaacctccc tcaaaagaac
     8881 ttt
//
LOCUS       DAXHRP010000079         8793 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.079, whole genome shotgun sequence.
ACCESSION   DAXHRP010000079 DAXHRP010000000
VERSION     DAXHRP010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.079"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            106..354
                     /locus_tag="ACFM72_001301"
     CDS             106..354
                     /locus_tag="ACFM72_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HFC6257860.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLIGIEKP
                     ARNAGRLKKFSHMENTDISRILEDDNETAALFFEESAL"
     gene            351..737
                     /locus_tag="ACFM72_001302"
     CDS             351..737
                     /locus_tag="ACFM72_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HFC6257861.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(917..2272)
                     /gene="yegQ"
                     /locus_tag="ACFM72_001303"
     CDS             complement(917..2272)
                     /gene="yegQ"
                     /locus_tag="ACFM72_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HFC6257862.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSTAKQSQYVGHVTEIDENGWATVEVKNR
                     FAVSDSLEIIHPSGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMQGKEKALIARVLN
                     P"
     gene            2597..3385
                     /locus_tag="ACFM72_001304"
     CDS             2597..3385
                     /locus_tag="ACFM72_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HFC6257863.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAEAGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPSVDEDGVLRGLQDLGVI"
     gene            complement(3431..4030)
                     /locus_tag="ACFM72_001305"
     CDS             complement(3431..4030)
                     /locus_tag="ACFM72_001305"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HFC6257864.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKLGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            4158..4775
                     /gene="gmk"
                     /locus_tag="ACFM72_001306"
     CDS             4158..4775
                     /gene="gmk"
                     /locus_tag="ACFM72_001306"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HFC6257865.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEANGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTGAEGVNALAAAGYDVIL
                     EIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4834..5040
                     /gene="rpoZ"
                     /locus_tag="ACFM72_001307"
     CDS             4834..5040
                     /gene="rpoZ"
                     /locus_tag="ACFM72_001307"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HFC6257866.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            5132..7288
                     /locus_tag="ACFM72_001308"
     CDS             5132..7288
                     /locus_tag="ACFM72_001308"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC6257867.1"
                     /translation="MPAPQPSAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLCAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(7355..8539)
                     /gene="coaBC"
                     /locus_tag="ACFM72_001309"
     CDS             complement(7355..8539)
                     /gene="coaBC"
                     /locus_tag="ACFM72_001309"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HFC6257868.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRCITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTELPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAGYL
                     NK"
BASE COUNT         2206 a         2026 c         2355 g         2206 t
ORIGIN      
        1 caaggtgtga ataaaacggc ggatataatc aaatatatgt aatgagattc ccaaaatctt
       61 ggtaatgatg tatattagtc aagttagcta atcatgagaa gtgttatgtt tcaagcaaat
      121 attcatcagg caaaaaccaa tttgagtcaa ttgattcaaa gagcagaagc aggggaaatc
      181 gttattattg cgaaggcagg taagccttgc gtccaactaa tcggtattga aaaaccggca
      241 cgaaatgcag gaaggttgaa aaaattcagt catatggaaa atacggatat ttcacgtatt
      301 cttgaggatg acaatgaaac ggcagcttta ttttttgagg agtcggctct gtgagaaaga
      361 ttctgcttga tacccatgcg ttgctgtggt ggttgttgga tgacaagaaa ctggggatat
      421 ctgcacgcaa actgatagaa aatccgagaa atgcgatctt tgtcagtgca gcaagtattt
      481 gggaaatttc catcaagcag aacaaggggt tgttgaaatt accggaagag ttttttgatg
      541 tgcttcaaga agaggatttt gaaatgttgc ctataggtct gtttcatgca aaacaggctg
      601 gaagccttcc ggagatacac aaagaccctt tcgataggat gttgattgca caaacccaag
      661 cggaaggctt tgaactgatg actgtcgatg aatatattcc gcaatatgga attagagttg
      721 tcaacgcatc aagctgacaa atacaaaaac tgtgtacaca agaaagaccg ccgaggcggt
      781 cttttcggtt attgtcttcg cttaaaagcc agacttctgt cgtggactat aggtgtgtcc
      841 cgatctgaat ctgccgcaca ataaggcaag gggattaaaa atgccgtctg aaaaatgttt
      901 cagacggcat aatggcttag gggttcaaca cgcgtgcgat gagggctttt tctttaccct
      961 gcatattggg gattttgacc tgaatgccgt tgcccggggc aacatcgaca ggctggcctt
     1021 tgcgggtcat ttgttccaat ttgatggttt ggttgccgct cgggtggatg atttcgagtg
     1081 aatcgctgac ggcaaagcgg tttttgactt ccactgttgc ccagccgttt tcatcgattt
     1141 cggtaacgtg tccgacgtat tggctttgtt tggcggtgga atggccggtc aggtagtttt
     1201 gataatcctg agtttggtgg cgttcgagga agccgctggt gtagccgcgg ttggcgaggc
     1261 cttcgagttc gctcaacagg ctgtaatcaa acggacggcc tgcgacggca tcatcaatcg
     1321 ctttgcggta ggactgggcg acgcgtgcaa cataatagag cgatttggta cggccttcga
     1381 ctttgaggct gtccacgccg attttggcga gtttttcgac gacttcgata ccgcgaaggt
     1441 ctttggaatt catgatgtag gtgccgtgtt cgtcttccat aatcggcatc atttcgcccg
     1501 ggcggttgga ttcttcaatc aggaaaactt tgtcggcgta gggatggcgt ttttgaccgt
     1561 tgatgccttc aaagttttgg ttggcttctt cttgggcttt ttcaaagttg aaaccttgca
     1621 gaagctgggc atcgcctgca tcgctttccg tggcattgtg aaccttgtaa tcccaacggc
     1681 aggagttggt gcaggtgcct tggttggggt cgcggtggtt gaaatagccc gacaataggc
     1741 aacggcctga ataagcgatg cacaatgcgc cgtggatgaa gacttcgagt tcgatgtcgg
     1801 ggcattcttg gcggatttcg gcgatttctt ccatactcaa ttcgcgcgac agaataatgc
     1861 gttcgacgcc gatgttttgc cagaatttca cgccccaata gttggtggtg ttcgcctgta
     1921 cggacagatg gatcggcatt tccggccatt tttcgcgcac ggtcataatc aaacccggat
     1981 ccgccataat cagcgcgtcg ggtttcatgg caatcagcgg ctccatgtcg gcaacgaagg
     2041 ttttgagttt ggaattgtgc ggcagggtgt tgacggttaa aaagaatttt ttgttgcgct
     2101 cgtgcgcttc tttaatgcct tgttctaaaa catcaagttt ggcaaattcg ttgttgcggg
     2161 cgcgcagtga gtaacgcggg ctgccggcgt aaacggcgtc tgcgccgtag tcgtaggcgg
     2221 cgcgcattct ttccaatccg ccggcgggca ataagagttc gggtgctttc atcgtgtttc
     2281 cttttcggtt gaaaccccgc cctttagggc agtagaatca gactttattt gggaggggcg
     2341 taaccccttc cgaatcaggg caacatatag ggcgacgctt tatgtgtcgt cctgtgtgtt
     2401 gaaacatgat ttgtatgctt tgtaaaaatg tttcagacgg cattgctgca aatgccgtct
     2461 gaaaagggtt tgaggatggg cggattatcc gcctttttgt attttcggtc aattttgacg
     2521 ggaaatttat aaggatttat caagtatttg cctgcttggg atataatgcg gtagtttgaa
     2581 tgcgagagag aatgtgatga atcctaaaat cgtgtttttc gacattgacg atacgctgta
     2641 ccgaaaatat acggatactt tgcgcccttc cgtgaaaacg gcggtggcgg ctttgcgcgg
     2701 caaaggtata ttgacggcgt tggcaacggg gcggtctttg gcgacgattc ccgaaaaggt
     2761 cagggatatg atggcggaag cgggaatgga tgccgtggta acgataaacg gacagtttgc
     2821 gctgctgcac ggaaaaaccg tgcgcgaagt accgatggat gccggtttga tgggcagggt
     2881 ttgcgcgcat ttggatggct tgggcatgga ttatgcgttt gtcggcggag aggggatcgc
     2941 tgtgtccgcg ctgtcggaat gcgtgtgccg cgccttgaag catatcgcca gcgatttttt
     3001 tgccgataag gattattttt caagcaaacc ggtgtatcag atgctggtgt ttgcggagga
     3061 aaacgaaatg ccgctttggt cggatattgt ggaacgggaa ggcttgaaaa cggtgcgctg
     3121 gcacgaggaa gcggtcgatc tgctgcctgc gggtgcgtcg aaaacggacg gcatcagaag
     3181 cgtggttgaa gcattgggat gggaaatggc agacgtgatg gcgttcggcg acggtttgaa
     3241 cgatgtggaa atgctgtcag aagtcgggtt cggcgtggca atgggcaacg gggaacaggc
     3301 ggcgaaagaa gcggcgaaat atgtttgccc cagcgttgat gaagacggcg tgttgagggg
     3361 cttgcaagat ttgggcgtga tttgaacgca tcataacaac cctgccggtt tcagacggca
     3421 gggtcggttt tcagcccttc atacagcctt cgttttgaag cagggtaaat aagggcgcgc
     3481 cgcttgcacg gatattcttg ccgccttgaa ggtcggtaaa ttccaaaatg gcggcggctt
     3541 cgacaatttc tccgccgagt ttgcggatca gttccagtcc ggcaagcatc gtgccgcccg
     3601 tggcaaccaa atcatcgacc agcagcacgc gcgaaccgag tttgacggca tcggtgtgga
     3661 tttccaccgc agcttccccg tattcgagcg cgtagctttg cgatacggtt tcaaaaggca
     3721 gcttgccttt tttgcggatg gggacgaaac cgacgttgag ctggtaggcg agtgccgcgc
     3781 cgataatgaa gccgcgcgcg tccaaaccgg caacgatgtc gattttctga tccatatagc
     3841 ggtaaaccaa taaatcaacc aaaaggcgga agtattccgc gctttgaagg acgggcgtga
     3901 tgtcgtggaa taagatgcct ttttgcggcc agttttcgat tttgcggatt ttgtcggcaa
     3961 gtgcgccgac actcatagct tcgggatgaa ccagcattgc gtgttccaag tttgatgttt
     4021 ttaacgccat attgtagccg tcagcctgtc gcttgccaaa tcaatcaaaa caatagcggc
     4081 aaaatatggg catcggcaaa taggaaactg ggtgtccatt gtgatacaat cggctggaaa
     4141 atatacaggt aaaaaatatg tccgcttatc gaaaaggcaa catctttatc atttcggccg
     4201 cttccggcac gggcaaaacc acgctggtgt cgcggctgtt ggcaaaccat aacggtttgc
     4261 gcgtttccgt gtcgcacacg acgcgcccgc cgcgtgaagg cgaagcaaac ggcgtacatt
     4321 atcactttgt ttccaaagaa gagtttgagt cgcttatcgc gcaggaagct tttttggaat
     4381 acgccgacgt atttggcaac tattacggca caggcgcgga gggtgtgaat gcgttggcgg
     4441 cggcaggcta tgacgtgatt ttggaaatcg acgttcaggg cgcggcgcag gttcgcgacg
     4501 cgctgcccga agccgtcggc atctttatcc tgccgccttc tttcgacgta cttgccgcgc
     4561 gcctcaacgg acgcgggacg gacagtcggg aagttatcca aaggaggctg tcgaaggcaa
     4621 ggcatgaaat cgagcagtcc gtattgtttg actttgtcgt ggtcaatgac gacttggcgc
     4681 gagcggagga ggatttgcgc catattgtga atgcctgccg tctgaaaagg tcgcggcaac
     4741 tggggtttat tgcagatttg ttggaaaatt cctagaaaac ggcgaaaata cccggtttcc
     4801 caatttaaat atttttgaaa gaaagcaaat aatatggcac gtattaccac cgaagactgt
     4861 accggaaaaa tttccaacca ttttgacctg acattggtag cggctcgccg cgcccgccag
     4921 cttgagaacg gcaacacgcc gcttgtggac gatgtccgca ataacaaacc gaccgttacc
     4981 gccttaaggg aaatcgccgc cggacatatc ggtacagaac tgttgacgcg caataaataa
     5041 attctgccgg aaacgcacgc cggaacactt tgccgccgtg cagtccgacg gtttgaaatg
     5101 aaaaacacat acataccgaa agccgtctga aatgcccgcc ccccaacctt ccgcccctta
     5161 cgaccccctg accgccgaag cgcgtgccct gcttttccat accgcctcct acctcaagcc
     5221 cgaggaacag gcggagcttg aaaaagctgt cgcctatgcg tttcgcgccc acgacgggca
     5281 aacccgcaaa agcggggagc cctacatcac gcatccgatt gccgttgcga cgcagctcgc
     5341 cctttggcat atggacatac agggtctttg tgcaggcgtg atgcacgacg tattggaaga
     5401 tacgggcgtg acaaaagggg aaatggcggc ggtgttcggc aatacgattg ccgagatggt
     5461 ggacggtctg tccaaactcg aaaaactcaa atttgaagat catgcggaac atcaggcgga
     5521 gagtttccgc aaactgattt tggcaatgac caaagatgtg cgcgtgattg tcgttaaact
     5581 tgccgaccgc ctgcacaata tgcggacact cggttcgatg cgcccggaca aacgccgccg
     5641 gattgcaagg gaaacccttg aaatctatgc acagattgcc aaccgtatag gtttgaataa
     5701 cgcatatcaa gagcttcagg atttatcgtt ccaaaacctg catcccaacc gctacgagac
     5761 tttaaaaaaa gcgatggaca agagccggaa gaaccggcag gacgttgtcg gcaaagtctt
     5821 gtgcgcattc ggccagcggc tggtaggcgc gaatatagag gccaaaatca aaggcaggga
     5881 aaaaaacctg tacggcatcc atcagaaaat gatggcgaaa aagctgcgct ttgccgaggt
     5941 tatggatatt tacggtttcc gcgtcattgt caacagcatt ccagcctgtt atgccgcact
     6001 cggcgcattg cacaccctct atcagcccaa gcccgggcgg ttcaaagact atatcgccat
     6061 tccgaaaagc aacgggtatc aaagtctgca tacgactttg gtcggtcctt acggcttgcc
     6121 gattgaagtt cagatacgta ccaaggaaat ggatgctgtt gccgaaggcg gtatcgccgg
     6181 acattggagc tataaatcat attctaagac ggtcgatcag gcggtgcttc acacaaaccg
     6241 gtggctgaaa aatatcttag atttgcaggc aagcagtgcc aatgccattg agtttctcga
     6301 acacgtcaaa gtcgatttgt ttccgaacga aatctacatc cttacgccaa aaggaaaaat
     6361 cctaactttg cccaaagggg caacgcctgt cgattttgct tatgcggtgc ataccgatat
     6421 cgggcacaaa accgttgccg cacgtatcaa caatatcatg atgccgttgc gtacgaagct
     6481 caaaaccggt gattctgttg aaattatcac atccgaacac gccaaaccca atcccgcgtg
     6541 gttgaatttc gccgtgtcag gcagggcgcg cagtgccata cgccaatata ttaaaaacct
     6601 taaccggcac gatgcggtcg ttttgggaga gagtctctta caaaaagccc tgtccagttt
     6661 gctgcccaaa gatgtcctgc tttcagacgg catcaaagaa aaataccttg ccgatctcaa
     6721 cgacaaacag acttcatttg aggaagtgct gtacaacgtc ggtatggggc ataccctgcc
     6781 tgtttatgtc gccatgcaca ttgccgagtt ggcaggggag catttcggta gcgaggtcag
     6841 gctcagttcc attaaagtcg atggtcagga aagcgggcat attcattttg cagagtgctg
     6901 ccaccctgtt cccggtgatt ccatccgttt gctgttggtt aagggaaaag gcatgattat
     6961 ccatagggat acctgcccga cgttgttgaa gtccgatccc gaacagcagc tggatgcaga
     7021 ctgggaaaat atgaacgggc agaactaccg tgtcgggctt caagtccaat cggaagacag
     7081 ccacggcttg ctggcattaa tggcgcaagc gatttccgat tccggtgcgg acattgagtc
     7141 ggtcgaaaca ccgtctaaat cccagtcggg aacggaaggt tttgtcgaat tcaaattctt
     7201 attgaaagtc aagaatctga atcaattgaa tcagattatt caaaatctgc atagtattcc
     7261 atatatccgc aaagtcatca gaagttgaag cagataaaac gggttgtctt ttgattaaca
     7321 ggcaacccgc tttatggttt atccgttcaa ttgcttattt gttcaaatat ccggcaagcc
     7381 tttcaacaat ctgcatcgcc gcttcatctt tacttgtttc gggaaaagat agttccccgt
     7441 cgtccccgat aatggtaatc cggttggtcg gtttgcccat cgcgattgaa acatcattgg
     7501 caactatcac cggtattttt ttcttaatac gtttttctcg tgcatatgcc attacattct
     7561 ccgtttcagc ggcaaaaccg atgcagaacg gcgggttcgg caatgaggca atagaagcca
     7621 aaatatcggg gttctcatcc aattcgatgg ataacggttt ggcattttta tcttttttga
     7681 atttttgcgt actcttgttt ttaaccttat agtctgagac ggcggcaaca gaaataaaag
     7741 catcttgttt ttcaatcaaa cgatgcactg cgcgatgcat atcttcagcg ctgacggctt
     7801 gaaccgtatc ggatatgccg aaaggcagtt cggtttgaag ctgtccgtga atcaggctga
     7861 cttccgcacc ggcggcacgg cacgcccgcg ccaaagctac ccccattttt ccgctggagg
     7921 tatttgtgat gcacctgaca gggtcaatgg cttcaaatgt cgcacctgcg gtaatcaaga
     7981 ttttcttgcc ccttaaaatt ttcggtgtcc acaagtccgg aagcaaatcc agcaattcgg
     8041 caggttccgg catccttccc ataccatttt ctccgcaagc ctgttcgccc aagcccggca
     8101 tatagacagt aatgccgtct gaaaccagtt gtgcgatatt ccgttggttg gcagggttga
     8161 gccacatttc cacattcatc gcgggagcga tggcgagcgg acatttccgt gcggctgcca
     8221 gactggtcag taggttatct gccacgccgt tacagatttt tgccacggta ttcatacttg
     8281 ccggcgcaat cagaaaaaca tccgcattcc gggtcaggtt gatatgttcc ataccgtttg
     8341 aaccgttgcc gccgtgcgtg tcggtcagga caggattgcc gcttaaagcc tgaaaagtca
     8401 gcggagaaac aaattcagtt gccgagcggc tcataaccac cgtaaccgaa tgcccctgtt
     8461 ttttcagcag acgaaccaac tcgcaagact tatacgccgc aatactgccc gttacaccta
     8521 aaagaatatg tttacccatt ttgacaattt ctaattacga agaaaaaaca gcagccattc
     8581 tataacaaag tgcggataca ttagttaccg tttggataca aaatgccgtc tgaagcccta
     8641 agtttcagac agtatattca caaaggcgca ccagtcagag gagggggagg aagggattat
     8701 tggagacggc gcagcatttg gcagaaataa aaaaccttat ccgacagcga catgacgaat
     8761 ttccccaaaa aaatcccact gaaagcattg acc
//
LOCUS       DAXHRP010000080         8784 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.080, whole genome shotgun sequence.
ACCESSION   DAXHRP010000080 DAXHRP010000000
VERSION     DAXHRP010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8784
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.080"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="ACFM72_001310"
     CDS             complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="ACFM72_001310"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HFC6257869.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDERVYPQTLDVMKTRAKYFGFELVVGDFAKADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTVGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLGEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKDDNPLVNAPHTAADITGDWARPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3163..3522)
                     /locus_tag="ACFM72_001311"
     CDS             complement(3163..3522)
                     /locus_tag="ACFM72_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257870.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAYPLAWLVPAGFMVLGGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            3521..3745
                     /locus_tag="ACFM72_001312"
     CDS             3521..3745
                     /locus_tag="ACFM72_001312"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFC6257871.1"
                     /translation="MPSEPAGRLFQKTPYRCNFMRLYGVGFALQTAYASRSSLVFQSV
                     HDYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            complement(3797..4438)
                     /locus_tag="ACFM72_001313"
     CDS             complement(3797..4438)
                     /locus_tag="ACFM72_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HFC6257872.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVLV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(4428..4979)
                     /locus_tag="ACFM72_001314"
     CDS             complement(4428..4979)
                     /locus_tag="ACFM72_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HFC6257873.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIDSDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(4983..5501)
                     /locus_tag="ACFM72_001315"
     CDS             complement(4983..5501)
                     /locus_tag="ACFM72_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HFC6257874.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5501..7162)
                     /gene="pqiB"
                     /locus_tag="ACFM72_001316"
     CDS             complement(5501..7162)
                     /gene="pqiB"
                     /locus_tag="ACFM72_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HFC6257875.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWIKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN
                     GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRQTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(7155..8489)
                     /locus_tag="ACFM72_001317"
     CDS             complement(7155..8489)
                     /locus_tag="ACFM72_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HFC6257876.1"
                     /translation="MPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCR
                     ADVPRLDSGEAAFCPRCGHKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPG
                     AASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALR
                     LATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSV
                     PQHWVYFQIGRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLS
                     ISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSAS
                     ILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFH
                     TYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
BASE COUNT         1960 a         2255 c         2483 g         2086 t
ORIGIN      
        1 gaggcaacgc tgtactggtt tttgttaatc cactatattt gtttgtccgt gtggaaatga
       61 catcaaaggg tgtgaatagg cttttcatct ttgaaatctg tctgcccgat cggatgaata
      121 aaaagtagga tgataaaaaa gctgatgtat ggatactggt ttaacccatt tgttttaaag
      181 ttatagtcga gatacgtgta tcggtgcaac cagtctgccg tcgacgaaaa tgccgtctga
      241 aagtgtttca gacggcattt gtcttcgggg tttcaacggt cagtcttcat aattttccat
      301 cggtgggcag ctgcacacga gattgcggtc gccgtacacg tcgtccacgc ggttgacgaa
      361 gggccaaaac ttgtgttcgc gcacgaaggg cagcgggaag acggcttctt cgcgggaata
      421 cgggcgcgcc cagtcgccgg ttatatctgc ggcggtgtgc ggcgcgttga ccagtgggtt
      481 gtcgtctttc ggccattcgc cgcgcccgac tttcagcact tcctgtttga tttgtttcag
      541 ggcggcgatg aagcggtcga gttcggcttt gctttcgctc tcggtcggct cgatcatcag
      601 cgtaccggca acggggaagg aaaccgtcgg cgcgtggaag ccgtagtcca tcaggcgttt
      661 ggcgatgtcg gtttcggtaa tgccgctttc ggctttgagc ggacgcaaat cgacgataca
      721 ttcgtgcgcg acgcggccgt ttttgcctgt atacaggatc ggatagtctt cgcccagccg
      781 tttggcaacg tagttggcgt tgagcaatgc ccagcgtgtc gcctgttcca tgccttgttt
      841 gcccatcatg gtcagataca tccaagtaat cggcagtatg gacgcagaac cgaaggccgc
      901 agcagcaacg gcggtttggt cggcactggc gctgtgggtg tcggtcaaag cgtgtcccgg
      961 tgcgaacgga gccagatggg ctttcaagcc aatcggaccc atgcccgggc cgccgccgcc
     1021 gtgagggata cagaaggttt tgtgcaggtt catgtgcaac acgtccgcgc cgacttcggc
     1081 aggctgcatg atgccgattt gagcgttgag gttggcgccg tccatataaa cctgtccgcc
     1141 gttttcatgg atgatgcggc agatgtcgcg gatgccttct tcgtacacgc cgtgggtgga
     1201 cggataggta atcatgatgg cggacaaagc gtcgcggtgt tgctcggctt tggctttcaa
     1261 atcgtcgatg ttgacgttgc cgtgttcgtc ggtatcgacg acgacgactt tcaaaccgag
     1321 catggcggcg gtggcggggt tggtgccgtg ggcggatttg ggaatcaggc agatgttgcg
     1381 ctgcgcttcg ccttgcgctt cctgatagcg gcggatggca agcataccgc tgtattcgcc
     1441 ctgcgcgccg gagttgggct ggaaggaaat tgcgtcaaag ccggtgatgg ctttcaggct
     1501 gttttccata tcggcaagca attcgcggta gccgacggtt tgcgcttcgg gagcgtaagg
     1561 gtggatgtcg gagaactccg cccaagtaat cggcagcatt tccgcagtcg cgttgagttt
     1621 catggtgcag ctaccgagcg aaatcatgct gcggttcatc gccaaatcgc ggtcttcgag
     1681 ttttttcaga tagcgcaaca tttcgtgttc ggtgtggtaa cggttgaaca caggatgttg
     1741 cagaatatcg tcctgacgca gcaattctgc attcagacgg cctttgacat catcggcaaa
     1801 tgcgaacgta tccttgccgg taaacgcgcg gtacaaatca accaaatctt cgcatgccga
     1861 tgtttcgtgg aatgcagccg caacttgagt atcgttaacg cggcgcaggt tatagcccga
     1921 ttccaaagca gcggcaaaca cttggtctgc tttctctttg ttgccgaaat cgacggtaac
     1981 ggtatcgaag aagaccttat gaaccacatt caggccgtct gaaaccagcg catcggcaaa
     2041 ggcagaagcc agcgcgtgaa tgcggttggc gatgcgtttc acaccttcag ggccgtggta
     2101 aacggcgtac atacccgcca agttcgccag caatgcctgc gcggtacaaa tattggatgt
     2161 cgctttttcg cggcggatgt gttgctcgcg ggtggacaac gccatgcgca aggcaggttt
     2221 gcccgatgcg tctttggata cgccgatgat acggcccggg gcggaacgtt tgaactcgtc
     2281 tttaaacgcg aaataagcag catgcggacc gccgaagccc atcggtacgc cgaagcgttg
     2341 ggtgttgccc aaagcaatat ccgcgcccaa ttcagccgga gacttcagca aaaccaagct
     2401 cataatgtcg gcggcaacgg ccacgattgt gcctttggct ttcagacggc cgataacgtc
     2461 ctgcaagtct tgcacatcgc cgtctttgcc gacgtattgg aacagcgcgc cgaagtattc
     2521 gccttcatcc gctttggcaa aatcgccgac caccagctcg aagccgaaat acttggcacg
     2581 ggttttcatc acgtccaaag tttgcggata cacgcgctcg tccacaaaga aacgctcgga
     2641 ttttaccttg cccacgcggt gcgccatcgc catcgcttcg gcggcggcgg tcgcttcgtc
     2701 cagcaaagac gcgcccgcca cagggaaacc ggtcaaatcg atacacactt gttggaagtt
     2761 caacaaagct tccaaacgac cctgggcaat ttccgcctga tacggcgtgt aggcggtata
     2821 ccagcccgga ttttccaata cgttgcgcaa aatcacattc ggcacgcggg tcgggtaata
     2881 gcctaaaccg atataggact tgttgatcac gtttttcgac gcaatgcctt tcaattttgc
     2941 caacgcgtcc gcttcggtca gggcatcggg caaatcgagt tcagacggca tacggatgct
     3001 ttgcggcacg gtgttgccga caaaatcgtc catacttttc tcgccgacag cggcaagcaa
     3061 cgccgcttcg tcgccgaaac tcaaatgccg cgcggcaaat tcgtcggggt tgaacagttc
     3121 ggacagtttc atttctactc cttcgggttt gtagggctgc catcaggcag aatttttaga
     3181 catcggatga ttcgggcaag ggtagcacaa aagacgggat aatggcggac aatgcgccag
     3241 aatgcagcag gtcaggacaa gcagcgccac aagcggcagc gataagggaa agccgccgcc
     3301 caaaaccatg aaacctgcag gcaccagcca agccaatgga tacgccggaa gcggaaaaac
     3361 aatattgagc agaaccaaaa tcacgacaaa cagcggcaga cccgccatca ggttggcacg
     3421 cctgtatgtt gcgtacgggt cggatgcttc ttcaggttcg caatattcca tgatttcagc
     3481 ctgtccgggc tttatccaca gcaggctcgg acggtcggtc atgccgtctg aaccggcagg
     3541 ccgtcttttt caaaaaacgc cataccgctg caacttcatg cggctgtatg gcgtaggctt
     3601 tgcacttcag acggcatatg cgtcccgaag cagtttggtg ttccagtcgg ttcatgatta
     3661 tagtggatta aatttaaacc agtacggcgt tgcctcgcct tgccgtacta tttgtactgt
     3721 ttgcggcttc gtcgccttgt cctgattttt gttaatccac tatatataaa caacttgggt
     3781 gcggataaac ctttgtttat ctaaacccct gttttctcaa aaattgattc aaatcttcgg
     3841 caaatttccg atagcctttg ccgttggcgt ggatttggtc ggatttcaga ttattatcgc
     3901 ccaaaatttc cgcccacgcg ccgccgaaca gcggaatgcc gtattcctcg gacaaatcct
     3961 catacagcgg atgatcgctc aaatgcccga acaacgcgcc caaggtaatg tgcggcacgc
     4021 cgacgaggac ggcggggatg ttttccttct gcacggtttc gatgattttc gcgatattgg
     4081 cgcgggtctg ctccttggga actttgcgca gaaagtcgtt gccgcctatg ccgacaagca
     4141 caagcttggg tttgcgtgcc aacagcgcgg gcaggcgcga cagggcttgg gcggatgtat
     4201 cgcccgatac gccgccgttg acaatattcc aacccgtcag tttttgcagt tgcgcggggt
     4261 aggattcgcc agggtttgcg ccgtagccga aggtaagcga atcgcccaag gcaagtacgg
     4321 tgcttccttc gggaattttg gcgtgggttc gggcggattt tctgccgcag gcggtaagca
     4381 gcaacgcgcc tgcgccgagg aggaaggttc ttctgttcat tggtttttca gatggcatcg
     4441 agccatttcg ggtggtattt cagggtttca cggtaaaccg gacagctttc ggcgtgcgcg
     4501 cctttgaggt agccggtact catcagaaat tcgccgacga tttcgccgcc gacgaatttg
     4561 aaatgttttt taaagagttt aacccattcg tctttgcttc gcggatggtg cgcgtcgagc
     4621 cagttcttga acgagccgta ttcttgttgc aacgcttgga tttgccgtgc attgaaaatg
     4681 gcggcatcga ttttcaggcg gttgcggacg atgcccgcgt cggcaagcag gcgttcgcgg
     4741 tcggtgtcgt cgaaggcggc aaccgtatcg atgtcgaaac cttcaaatgc cgtctgaaac
     4801 gcctgccgct ttttcagcat cagcgtccag cttaatcctg cctgattgat ttccaacacc
     4861 agccgttcaa acagtccgtt gtcgctgtca atcggaaaac cgtattgcgt gtcgtggtaa
     4921 tgtttgttcg ggttatcggt gttttcggga agtgaggcgg caaattcgca atagttcacg
     4981 gtttactcga ccatctgttg cgccgcctgt ttcagtccct gttcgagtgc ggcggtcatc
     5041 gcggcgtagc cgtcaccctg ctgttcggtt tcgatatgga agggtctgtt cgtaccgtcg
     5101 ggtaggacgg cgtagccgct gatgagggtt ttgcccgtgt agctgccttg gaatgcgtcg
     5161 atatagaccg tccatttttc ggtactgccg ctgcgtgagg caggaacaaa gatgcgtgtg
     5221 ttgtccaaac ggttgaatgc attgctcaac gccgcttcga gcatatcgtc caaggtgtct
     5281 gcccaaacgt ggttttgtgc ggtgttgagg cggtaggggt cggtttgata gaccagtccg
     5341 ccgcgtttga gcggttcggc aagacggact tcgacggcgg tttcgccgcc ttgtgttgca
     5401 ggacggatgt agcggctgtc gggcaacacg aaatattgtg tgctttgcac agtaccgcag
     5461 gcggcaagcg tcagggcggc ggcaatcggg aagaggcgca ttatcggctt cctttcggga
     5521 tggggtcttt gctgctgctg ttgaaaatca gcgcgttggg tttttctttc aaagtgttaa
     5581 tgacgggttg aacgtctttt aaggttttgt ccaaactttg caacgtattt tgtacgtcgc
     5641 cgtagatagg cgattgaggc gatacgcctt gcagggtttg acgtaattct ttcagggttt
     5701 ggttcagttc gttcggaatg ttttgcgtct gcggattgcc ggccagtttg tcaatggagc
     5761 ttagggcggc attggcagat ttgagtgcgg acttgagctc ggcaagcgaa ccgttcaatt
     5821 cggcaaccgt cttatccaaa ggcagtttgt cgaacttgtc cagcaaatcc accactttcg
     5881 cctgcaaatc gtccaaaccg ccgccccgtg tggcgatgac ggtatcgcct gcataaacgg
     5941 tatgcggtcg cagcttgggc gaagacgaag gctgatcgtt caactcaatc attttgctgc
     6001 cggtcagcag gttgttgctg gagatggtgg cggtcaggcc tttgtttaaa gccgtctgaa
     6061 attgttgttt ccaatgctct ttgctttgtt cgtcggcatt gatttccaaa cgggaaggct
     6121 cgatgcggat gcgtacggga atccagccgt tttcaaataa atgcaggctg tcgttgcggt
     6181 cgaaataagg gacatcggaa accacgccga cattcagccc tttgtactcg acgggcgaac
     6241 cgacggtcag tccgcgcacg gattgtttga aaaacgcggt gtagtacagc gagcggtcgt
     6301 caggcaggtt ggcgacttcg ctgcggctgt cgtaaagcgt gaagctgtct tcgcttttaa
     6361 cgtttttact gtttttggtt ttcggcgaat caaatgaaat cgcgcccgac agcagggcag
     6421 gcagaggggc ggaattgagt ttgatgccgc tgcctgtggt ttcgatattg atgccgcttt
     6481 ccagccaaaa acggctggcg gaatgaatca gtttgtcgtt ggggctttgg atgaagatgg
     6541 tgtaatgcac gctttggtcg gacgggtcga aatgcgcgct ttcgatttgc ccgaccataa
     6601 agttttcata caaaacaggg ctgttgacgt tgaggatacg gtcgttttta ccaatcaaat
     6661 tcaagcgcag accgctttgc ccgatggcgg taacgggcgg aatgtcctgc acttggaaca
     6721 cgtcttttgc ctcgtcgctt ttgccgggtg taaaggcgat gtacgaaccc gaaagcagcg
     6781 tacccaaacc ggttacgccg ctttggtcga tacgcggctt gaccacccaa aactgtgtgt
     6841 cgctgcggat gaggccggat acgtccgcat tgagttgggc ggttacttcc acgcctttct
     6901 ggtcgtcgcg cagtttgatt cgggtaacgc gtccgacatc gatgctcaat accttaatga
     6961 ccgtattgtt gacctcaatg ccttccgcgc tgtccatcaa gagcgtaacc acaggccccc
     7021 tgttgcggat ttccttaatc cacagccagc caccggcaat cagcgcaatc agcgggacca
     7081 gccagacggc ggagagcaag gtgttgtttt tgcggacgcg tgcttgggcg tgtccgtttg
     7141 gaggagggct gttgtcagtc atgtttttcc gtttcgttga aagcaatgcc gtctgaagcg
     7201 cgtttgtccc aaagcaggcg cgggtcgaaa taataggcgg acagcatcgt cagaatcacg
     7261 accaggcaga aatagactgc cgcactgccc ggaatgacgc gcgcggcata agtgtggaac
     7321 gaacacatca aaataataat cacaaaaata tcaatcatcg accagcggcc gaccgcttcg
     7381 gtgatgcggt agaggtgcga caatttcttt gcacccgttg gcaaagcgaa gcgggcggac
     7441 gcaatcaaaa ccgacattgc cgcaatcttc agtaccggca ccaaaatact cgcgctgaaa
     7501 ataaccgccg caatcagcct gtcgccctcg tcccacatat aagcgatgcc gttaaggatg
     7561 gtattgacct ccgtggcggc aggattggac gaaatcataa tcggcaggat attggcaggg
     7621 aaatacaaaa taaccgccgc cgtcagaaac gccgacgaaa tactcagact tttcggccgt
     7681 cggcggtaca gttccgcacc gcacacgccg cagggggatt cggcactgtc gcggaaatac
     7741 aggcaacggc tgcaacaggt tttaccttcc gatgccgtct gaaccgcatt atcccccgtc
     7801 agccgcccga tttgaaaata cacccaatgc tggggaaccg ataccgaagt ccgaatcagc
     7861 ataaccgaca gcgcgaacat cagataaaac gccgatccga agcgaacctc tgccacagac
     7921 gagagcttga tatacgccac caaagtggaa acaaaaaaca catccaccat catcgcctgt
     7981 ctcaagcgca ccatcacacg cgttgccaaa cgcagcgcag gatacgcctg tttccgtatc
     8041 agcgcggcat agacatacag gcacagcagc agaaacagaa ccggcgcgcc gaaggtcagc
     8101 acaaacatca cttcggccaa aaaaccataa tcctgaaaca ccatcaggcg catcatctcg
     8161 ggcagcgaaa ggacggatgc cgcacccggt atcccgacct cgatatacgt cataccgtaa
     8221 gcaaacgcca ttaaaatcag cgaagccgcc gcataggcgg gcggggcgga aaaaggatgc
     8281 ctgcccaccc tgaagagttt gtgtccgcaa cggggacaga acgccgcttc tccactgtcc
     8341 aaccggggta catccgcgcg gcagccgcat tccggacaat ctaccgtatg cggcggcagg
     8401 gcttcgtcgc agcagttgcc gcgaaggctg tgggggatat tttcggcaaa cggcttcatc
     8461 gggaaagtgg caaatataag tggcggcatt ataaaggaaa aaaggcgata cacccaatca
     8521 ggatgcaaaa ccggcaggtt cggcagtatg aacaaaccct tggtgtccgg caaaaatatt
     8581 ttttgagcgg ttgtccgccg actgccgaac ccatttgata aaatcccgat tctgtaaaga
     8641 atagtaaaat acctgcttaa aaacatcacg caaatgatat tttttccaaa aatatgtgat
     8701 aataaatttc gtttatgatt ctttattatt tttatagtgg attaacaaaa atcaggacaa
     8761 ggcggcgaag ccgcagacag taca
//
LOCUS       DAXHRP010000081         8760 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.081, whole genome shotgun sequence.
ACCESSION   DAXHRP010000081 DAXHRP010000000
VERSION     DAXHRP010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8760
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.081"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(136..1269)
                     /locus_tag="ACFM72_001318"
     CDS             complement(136..1269)
                     /locus_tag="ACFM72_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257877.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGKEVWLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     VREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRDLSH"
     gene            complement(1389..1883)
                     /locus_tag="ACFM72_001319"
     CDS             complement(1389..1883)
                     /locus_tag="ACFM72_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257878.1"
                     /translation="MKNRFAKIVKDIFSFTQFVSEAENKIPNQSSRYYDCWRELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEIFKMSVLEDWERSGKPLDWKKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            complement(2032..2367)
                     /locus_tag="ACFM72_001320"
     CDS             complement(2032..2367)
                     /locus_tag="ACFM72_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257879.1"
                     /translation="MMADKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLNIARLSLTCFGHLARMHENIGDCDKVIALLRSKQGNPDFQGFAEDALDDI
                     SFFIFKKHP"
     gene            complement(2379..2738)
                     /locus_tag="ACFM72_001321"
     CDS             complement(2379..2738)
                     /locus_tag="ACFM72_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257880.1"
                     /translation="MASYVSIKGWIECSDDDIKIIQENINNFWNNCPFNIEEKESAKI
                     YKSGWIFPTNSFNWSSYIFFGACVKSYFIIYFEKCIKTIMELDIEISGFFELDYYEDS
                     YKVNWKINNGNLIQTTN"
     gene            complement(2959..3414)
                     /locus_tag="ACFM72_001322"
     CDS             complement(2959..3414)
                     /locus_tag="ACFM72_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257881.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVEKNKIISIFCYQELYFMGVNIIGLNFEIFKQLFHYPKLNDID
                     KCYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSIEPYYDE"
     gene            complement(3602..4024)
                     /locus_tag="ACFM72_001323"
                     /pseudo
     CDS             complement(3602..4024)
                     /locus_tag="ACFM72_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
     gene            complement(4160..4702)
                     /locus_tag="ACFM72_001324"
     CDS             complement(4160..4702)
                     /locus_tag="ACFM72_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC6257882.1"
                     /translation="MINHIEKYTGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYIT
                     LGLSKYNLNYKSRFEILFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVIYLPRS
                     IVDSTKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQ
                     FLLDNEVGNLSDMNRKPFTW"
     gene            complement(4829..5056)
                     /locus_tag="ACFM72_001325"
     CDS             complement(4829..5056)
                     /locus_tag="ACFM72_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257883.1"
                     /translation="MEIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            complement(5115..5438)
                     /locus_tag="ACFM72_001326"
     CDS             complement(5115..5438)
                     /locus_tag="ACFM72_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HFC6257884.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QIISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            complement(5428..5781)
                     /locus_tag="ACFM72_001327"
     CDS             complement(5428..5781)
                     /locus_tag="ACFM72_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257885.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQTGLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            complement(6078..6626)
                     /locus_tag="ACFM72_001328"
     CDS             complement(6078..6626)
                     /locus_tag="ACFM72_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC6257886.1"
                     /translation="MDYNQTVLSHLQKFWKHHDIKGFTWTLGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDQFQLGKTVN
                     IGRPWVEQSSFRHFLISLPYPYGQELEYMDNVRFFWLLPITQTERLFLNTHSVEELET
                     KFDEAGIDYLDINRASTVWQAG"
     gene            complement(6616..8433)
                     /gene="mafB"
                     /locus_tag="ACFM72_001329"
     CDS             complement(6616..8433)
                     /gene="mafB"
                     /locus_tag="ACFM72_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC6257887.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNTQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVTQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSKSYTCSFHGNTLVKTADGYKAIARIRVGDRVFSKDEASGETGYKPVTAQYG
                     NPYQETVYIEVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLFAENGAEQTVQ
                     SVTVKPEPLQAYNLTVADWHTYFVKGDKAETEGVWVHNDCPTKLKPTERYNRQTHYGG
                     SQTDGARAQAARQAGEGKPCPTCGRIQIFGTKTAPSPQHEPPLVKHYYEHGGHSMSNA
                     DRAKHARESIKGTQCLTCQRKEGAMMSRYSREQAKKHGL"
     gene            complement(8437..>8760)
                     /gene="mafA"
                     /locus_tag="ACFM72_001330"
     CDS             complement(8437..>8760)
                     /gene="mafA"
                     /locus_tag="ACFM72_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC6257888.1"
                     /translation="TELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQE
                     QYALWMGPYSVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIR
                     RRKGG"
BASE COUNT         2236 a         1979 c         1807 g         2738 t
ORIGIN      
        1 ccgtttaatg tgtatttccg ttttttggat tgtggttttc aatttgtagc gaatcggatt
       61 cggcatatac ggcattgcaa aaagcgtttg actctccaat gccgtctgaa aaccggtttc
      121 agacggcatt tgcgttcagt gagaaaggtc gcgcctgccg cccgaacgtc tcgctgcagc
      181 ctctgcataa cggctcacct ctttttccaa atcttccaag ttcaaaggaa aatcaggcag
      241 tctgtccccc tgtttctctt cgcggacaat ccgcccgcca tccaaatacc acgtctgttg
      301 cgcatgatag gtctgcatat ccgccgttac gccatccgct ttcaatgcta ccgtcgaaga
      361 ttgtgcaata aaaagatttc cgtttttcaa ataatattcg aaactctggc gtttttttcc
      421 attgtcgaaa ctccaataga ctttttgcgg cagaccgtcc gcatcatagc cgaccacaag
      481 actgttcgcc ttcatccccc ggggcatcaa ttcccgcata ttctgataaa acacagaatc
      541 gcgcgagtcc gacgcaatcc ggttgctctc ttcgcggaag tcccaaacct tctgctcgtc
      601 attcgcgaca tcccggtatt tcgccaaata tacctgggcc atctgataac acccgagaca
      661 atgctcataa acatcttccc cgattttccc acgccccgac gcatcaaata ccgaaccgtc
      721 cggttgccaa acaacccgat attctcctgt cgtttcataa ttttctccgt gagccgttcc
      781 gccgtacaca tttacagaaa acggacgatc gttccgatac agatattcgg cattaacaaa
      841 cgcttccggc gagcgttgcg aaagcgaaac cgcaaccaaa ccgccctcgc cgatatggta
      901 atccagccaa acctctttcc catgttcctg ctccgttacg tgaaaccatt tcgccttttc
      961 tttcaaacga ctgagccgga tagcgagcgc gagataatcc ttctccgact gcaacggacc
     1021 gtcatccaca gtttcggcaa gactttcctc cgtcctcatc gattccttca cgatgacaac
     1081 cgccctgtcg gcatttcgga acaggcgggc aagtttcgcc acaaaagcat tcggattttc
     1141 aggtatttca gttgctgtat cgctcaaaaa ccaacgcgga ttaatctcat aggcaatacc
     1201 cgttcccagc caaaaggcaa atacaagtgc aaaaaatgac aacagtaccg gtttgaattt
     1261 tttaaacata tttatttttc gtttaacaga atatatcgat tatatcagac gagctttgat
     1321 tgtttgattt ttaatttaat ctacggttgc tgccgtactt taaaaaccct tatgcaggct
     1381 gcggcttgtt actcttgttt gcttcggttc aattttttaa ctaattcaaa tgcttcagat
     1441 cgatattgcc tttgccattt tttccaatct aacggttttc ccgagcgttc ccaatcttct
     1501 aaaaccgaca ttttgaaaat ttccatttcc caccaatatt cggcatataa acgtgattga
     1561 ttgggaatgt cggcttctgc ccaatcggca aaatgcaaaa aatgagaaat atcgcaaact
     1621 atattatttt caggaacttc ttcggcaaat agatgcttga ctgactgtaa cgcttcggtc
     1681 tgatattttt ctgtccattt ctcccatttt tcaggctttc ccgatatttc ccaatcttcc
     1741 aatgcggaag cattcaagat ttccaattcc cgccagcaat cgtaataacg agaggattgg
     1801 ttaggaattt tattttccgc ttcggaaaca aattgggtaa aactaaaaat atccttaacg
     1861 atttttgcaa atctattttt cataggttgt cgccccctcc aaattgcgtg ccaacaactt
     1921 cggcaaaatc aagccggcaa gcccctgcat cctgtgccaa tcggagaaaa tgccgtctga
     1981 aagctgaata ccgcttcaga cggcatttgc cagatttgac cttgccggtg cttacggatg
     2041 ctttttaaat ataaagaagg aaatatcgtc taacgcatct tcggcaaaac cttgaaaatc
     2101 cggattgcct tgttttgagc gcaataaagc aatcacttta tcgcaatcgc cgatattttc
     2161 atgcatccta gcgagatgtc cgaaacaggt taatgacaat ctggcaatat tcaagtcttt
     2221 atgcttcgac aactccgtca atttctcaga aatccaaggg atttcatcct cctctgaact
     2281 gaaggtcata ccgagcatac cgtcaataac actctgttta ttttcagaat aaatcatctt
     2341 ttctacttgt tccttatcag ccatcatttt ttgtccattt aattagtcgt ttgtattaaa
     2401 ttgccattat ttattttcca atttacttta taactatctt cataataatc taattcaaaa
     2461 aaacctgata tttcaatatc caattccatt attgttttaa tacatttttc aaaataaata
     2521 atgaaataag attttacgca tgcaccaaaa aaaatatagc tgctccaatt aaaactattt
     2581 gtcgggaaaa tccacccgct tttatatatt tttgcagatt ctttctcttc gatattgaag
     2641 ggacaattat tccaaaaatt attgatattt tcttggatga tttttatatc atcgtcagag
     2701 cattcaatcc atccttttat ggaaacatat gatgccatgt ttaatctcct aaacctgttt
     2761 taacaatgcc gccttttgat tcaatatatg acttaacttg tgaatgaaca ccgtgcctgt
     2821 tccgtacagc aagcacaggt tggattaaga ttcgacaatc tgtttggatt gacagaaagg
     2881 tcgtctgaaa aatcgattac ggtttcagac gaccttttgt tgttgagttt tcaacccaac
     2941 ctatgcctgc cattaatgtt attcatcgta gtaaggttct atcgaataat tgtctttgcc
     3001 cccggcaatg atagtaacaa ttttcccttt tgcttcccaa gcttgtactc ctatttcatc
     3061 aaactcatag acatatgtcg gataagattc attcgataaa taacatttat caatatcgtt
     3121 taacttgggg taatggaaaa gttgtttaaa aatttcaaaa tttagaccta ttatattaac
     3181 gcccataaaa tataactcct gataacaaaa tatcgaaata attttgtttt tttcgacgga
     3241 aatgagtaaa tttgagtcgg gagattcata atattctgtt ccaaactcat caggaggttc
     3301 atacataaaa gtttccagta tgtttttgta ctgtgttata tcagcaccaa aacggaatat
     3361 tcctacagaa gtaaaaggta aaaattcggg agttttaacg accgcgtcga ccatgctctt
     3421 ctccttttgt ttttcgattg gcatttttgg caatattttt gattttttgc ttaatcttta
     3481 agcgttcatt tttggacatt ccgggaataa ttttatttgt taattcagca atttttgatt
     3541 ccgctgatat ttgacttcga ccgccatctc catgtttttc attcttggag cttcctgttc
     3601 ttttaggcgg acaagaatta tgaacccaca ccccttccgt ttccgcctga ttgcccttga
     3661 cgaagtaggt atgccaatcg gcaacggtca gattgtaggc tttgagcggt gttggtttga
     3721 caacgatgtt gcggacggtt tgggttttgc cgctttcggc aaacagcctg cttcccgctt
     3781 tcaaatcttc cgctttaatc catttgccgc ccgaataaaa cggatggatg cggttggaaa
     3841 tcagggtttg gttgttgccg atgccgtctg aaatttcaat gtaaacggtt tcctggtacg
     3901 gattgccgta tcgggcggta acaggtttgt atccagtttt tccactggtt tcatctttgg
     3961 cgaagacgcg gtcgccggct tgaatatggg caatggcttt gtagccgtct gccgttttga
     4021 ctaaagcacc gacgtataag ggacggagac aggatttttg aagaacttag ttcccaatat
     4081 cctgtttcaa atgaaggaaa ggtcgcctga aaattaaaca cggtttcaga cggcactttg
     4141 attaaattta agaaaatcct taccaagtaa acggtttccg attcatatcc gaaaggttgc
     4201 caacttcatt atccaacaag aactgctcaa aagcattcca acctttcttt tccaccaatt
     4261 cggcttcctg tttatacaag gggacaagca aagggaaaac gatattgtag tgttcgccat
     4321 aacagacctg aaaatcatca tcgaaataaa atggggcgga aacatacagt gcatccattt
     4381 ttgttgaatc aacaatgctt ctaggcaaat aaataacctg tcctcgaaga agaatttttt
     4441 tgttctcaat gatggtttct gccaaccatc ttaaaaatgg aaaaatctga ttttcatcat
     4501 attttaaaga acatacaaaa agtatttcaa acctgctttt ataattcaga ttatatttgc
     4561 ttaaccctaa agtaatataa gtttttaaat ccctgttagg ggaagaggga atagctgcga
     4621 tatttaattt gtactgactt cccgaatcac ttttcgagcc atgagaaata gtgcctgtat
     4681 atttttcaat atgattaatc atatttttct tagcttccca tcactgtatc gaataatcat
     4741 agaccagatt gagacaaaac gccttgtccc cattgataga aagcccgtct gaaaagtaaa
     4801 agcgtttcag acggactacg tttgccgact atccgaccca ctttattatc caatgagatt
     4861 cttgcaggta ttcttttaat atttctaagt tttcgaccca gtcatcgtaa ctgtcaaacg
     4921 atgaaaattt gtcatttgaa gataacagta tcagaaatcc accggtattt tcctggtcat
     4981 caataatttt tatgaatttt tcttcaggat tgaccccatt caggataacc cccaaagtat
     5041 tgaattttat ttccatagac atcccctaat ctttaatggg aatatggttt tttcaaccca
     5101 acctacactt cttgttagtt cccatacgaa ccaaaacctt cataattaca atcatttttt
     5161 tgtgcaatat caaataacgt agtttcaata gctaaaatgt tttcaagaga agggacgata
     5221 ttgacggaac aatagcaagt ccacatttct ccgaattcat cttgttcaat actgatttga
     5281 aaatcttgcc gataagaaat gatttgactt tctattgatt gcagattctt ttgagaaccc
     5341 tctataaaaa actctattat catcgatttt gtcaaatcaa accctagttc ttgatattgt
     5401 ttcagtacat ctgaagtaga tttttcgtca attatcattt aatagcaact catcaaacca
     5461 tacgtcttca taaccgtttt ccccaattaa aaaacggtaa ccgggcggaa gtgtcaaaaa
     5521 ggggatgatt tcgggtcgcc atatttgcaa atggaaagta tgcaagggca ggaaaaaatt
     5581 tttatcatag gagaagtttt caccggccca gatataccaa ccgttagtat cacctttggg
     5641 acggtgcctt aacccgttaa tcggatacag gcctgtctgt ttgacatttt cagcaacacc
     5701 gatttttgaa acatcggaaa caggatatat ttctgtatta tattttttac aaattattat
     5761 ttgttcattt tttattccca ttactcagtt tctttttctg ttcttttgaa tattggctta
     5821 atctccctcc ctgttttgca gaacaagtcg gacattgcgc ttgtaccgat tcaattacct
     5881 ggcttcatct tgcttcatct ttggcaagga tacgggcaat aatttttcat ccgtctgccg
     5941 ttttgactaa agcaccgacg tataagggac ggagatagga tttttgaaga actcagttcc
     6001 cagtatcctg ttccattcat cagaataccg tctgaaagtc caaacttgtt tcagacggca
     6061 ttttgattgc cgaattttta tcctgcctgc cagacagtac tcgcacgatt tatatctaaa
     6121 taatcaatac ccgcttcatc aaatttcgtt tccaattctt ctaccgaatg agtattcaag
     6181 aaaagtcttt ctgtctgggt aattggcaat aaccagaaaa atcggacatt atccatatat
     6241 tccaactctt gcccataagg ataaggcaga gaaatcagaa aatgccggaa ggatgattgc
     6301 tcgacccacg gtctaccgat attgacggtt ttccctaatt gaaattgatc aggataatgc
     6361 atacttgcag atgccagcat tgccaaggtc tcaatatgtt caggtgtttc aaacgggctg
     6421 atgataaaaa actcctgccc taaaaattga cctatcccag agctgacata aacccaaggc
     6481 tcatcttcat gattaggaat cacttggaaa acttggaaat cgggaagttc ttcaacaatt
     6541 cttcctaaag tccaagtaaa tcctttaata tcatgatgtt tccaaaattt ttgcaagtga
     6601 gataaaacag tttggttata gtccatgctt tttagcctgt tctctcgaat atcttgacat
     6661 catcgcaccc tctttccttt gacatgttaa acattgagtt ccttttatgc tttccctggc
     6721 atgtttcgct cgatcagcat tgctcataga gtgaccacca tgttcatagt aatgttttac
     6781 taatgggggt tcatgttgcg gacttggtgc ggttttcgta ccaaatatct gaattctacc
     6841 acaagttgga caaggtttac cttctcctgc ctgtcttgct gcctgagccc ttgctccatc
     6901 tgtttgagaa cctccataat gcgtttgacg attataacgt tctgtcggtt ttagtttggt
     6961 tggacaatca ttatgaaccc aaaccccttc cgtttccgcc ttatcaccct tgacgaagta
     7021 agtatgccag tcggcaacgg tcagattgta ggcttgcagc ggttccggtt tgacggtaac
     7081 gctttgaacg gtctgctccg caccgttttc ggcaaacagc ctgcttcccg ctttcaaatc
     7141 ttccgcttta atccatttgc cgtccgaata aaacgggtgg atgcggttgg aaatcagggt
     7201 ttggctgttg ccgatgccgt ctgaaacttc aatgtaaacg gtttcttggt atggattacc
     7261 gtattgggcg gtaacgggtt tgtatccagt ttctccgctt gcctcgtcct tggagaagac
     7321 gcggtcgccg acccggatac gggcaatagc tttgtagccg tctgccgttt taaccaaggt
     7381 gttgccgtgg aaggagcagg tgtaggattt agaaaaatcc ccactaaccg cagccttccc
     7441 cggttttgcc gcctttgtca ggtttttgac tttggcaaac ggcaggacgt tgaccagggc
     7501 ttcgacggtt tcggcggcat tggggttttc ctgtatccac cggtcaacgg cttcgcgcgt
     7561 attcttttca aagcccgcca cgctgcccaa gccgccgatg gcggcgaatt tgccctcggc
     7621 gggtaagggg gcgatgttgc gcattgcggc tttgtctatg gcatagcgcg ttccgtacag
     7681 tatgtcgcct atgcccaagg cttcgcccgc gctgataaag gggttgagcg cgccggcggc
     7741 gacgccgttg ataaactcca tgctgttgcc ccagcggtcg agcttggcat tgtgctcgaa
     7801 catttttctg ttggcttcat cggcgcggtc ggagaaattg ctgccgaggt tgctgtaatt
     7861 gtcggatatg cgttgccgga tgctgcgggt gtcggtcgga ttgagtttga tactgcgggc
     7921 tgtgccgttg acgtgatagg tgtattcgtc gcgtgcgccc gtaggtttgg ggtaattgcc
     7981 gcccttcggg ccgtcgtagg catcggcggg atgatgttcg tgtccttccc agttgagccg
     8041 atacacggta aagccgtcgt caacgttgcc ttgttctttg cttgcgctgt cggcggcgtg
     8101 gttgtcgaag ggggcgtgtt cttcgtgtcc gtgtccggaa aagcgggtgt ggtagccgat
     8161 tgtgccgttg atgtttgcct gttggatgag caggttgccc atctggtggg tatagtcttg
     8221 ggtgacgttg atttgaccgg tgcggtcgga aacgctgccg cgcgggtcgc cgaagaggtg
     8281 gtatttgcct ccgggttcgt agtgctgccg ttgggtgtta tcggtaatga acgggtcttg
     8341 cgccaagtcc gccgcgaggg cgggctgtcc gaaagcagcg gccgctacgg cgcaggcggc
     8401 aaggaggttt gtcagtctgc gcagcggttt cacggtttat cctcctttgc ggcggcggat
     8461 gacttcgttg ccgacatcgg ggtttttacc gttgttttgt ttgaagtcgg gacggttttg
     8521 ggcggttgtg tcgccgtagg gggtgatgtc ggagaaatcg accatcaggc ggtctgaggc
     8581 tttgacggtt ttgccgacgc tgtaaggtcc catccagagg gcgtattgtt cttggtattg
     8641 ggattcgtag gcggcggttt taggggcaat cagcagtttc cggctgtcgc ggtcaacggc
     8701 gaaatattcg agcttggttt gggctttaag ggtttcggcg ttgtagaggt gcagttcggt
//
LOCUS       DAXHRP010000082         8645 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.082, whole genome shotgun sequence.
ACCESSION   DAXHRP010000082 DAXHRP010000000
VERSION     DAXHRP010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8645
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.082"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(104..1027)
                     /gene="era"
                     /locus_tag="ACFM72_001331"
     CDS             complement(104..1027)
                     /gene="era"
                     /locus_tag="ACFM72_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HFC6257889.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1074..1793)
                     /gene="rnc"
                     /locus_tag="ACFM72_001332"
     CDS             complement(1074..1793)
                     /gene="rnc"
                     /locus_tag="ACFM72_001332"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HFC6257890.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1960..2283
                     /locus_tag="ACFM72_001333"
     CDS             1960..2283
                     /locus_tag="ACFM72_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HFC6257891.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2331..2807
                     /gene="ribH"
                     /locus_tag="ACFM72_001334"
     CDS             2331..2807
                     /gene="ribH"
                     /locus_tag="ACFM72_001334"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HFC6257892.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2885..3310
                     /gene="nusB"
                     /locus_tag="ACFM72_001335"
     CDS             2885..3310
                     /gene="nusB"
                     /locus_tag="ACFM72_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HFC6257893.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3678..4712)
                     /gene="pyrC"
                     /locus_tag="ACFM72_001336"
     CDS             complement(3678..4712)
                     /gene="pyrC"
                     /locus_tag="ACFM72_001336"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HFC6257894.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENTDTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4928..5074)
                     /locus_tag="ACFM72_001337"
     CDS             complement(4928..5074)
                     /locus_tag="ACFM72_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257895.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            complement(5075..5299)
                     /locus_tag="ACFM72_001338"
     CDS             complement(5075..5299)
                     /locus_tag="ACFM72_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HFC6257896.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVQHK"
     gene            5408..6019
                     /locus_tag="ACFM72_001339"
     CDS             5408..6019
                     /locus_tag="ACFM72_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HFC6257897.1"
                     /translation="MRRTALLLLALAAGTSLAAGFSQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHNK"
     gene            complement(6079..6951)
                     /gene="accD"
                     /locus_tag="ACFM72_001340"
     CDS             complement(6079..6951)
                     /gene="accD"
                     /locus_tag="ACFM72_001340"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HFC6257898.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEEGREEIAGNVKPTDPLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(6989..7774)
                     /gene="trpA"
                     /locus_tag="ACFM72_001341"
     CDS             complement(6989..7774)
                     /gene="trpA"
                     /locus_tag="ACFM72_001341"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HFC6257899.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAKAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSWIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            complement(8199..8291)
                     /locus_tag="ACFM72_001342"
     tRNA            complement(8199..8291)
                     /locus_tag="ACFM72_001342"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8255..8257),aa:Ser,seq:gct)
     gene            complement(8448..>8645)
                     /locus_tag="ACFM72_001343"
     CDS             complement(8448..>8645)
                     /locus_tag="ACFM72_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC6257900.1"
                     /translation="LAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDAAL
                     ARFPEDAWFQEIKQDAQKHFA"
BASE COUNT         2100 a         2565 c         2049 g         1931 t
ORIGIN      
        1 acagataata tcaacccgtt tttaacaaag atattcccga ttgaaacaaa atgccgtctg
       61 aaacctgttc ggacggcatt tgcgtaaagt tcagcaagaa aaactacaaa cccagctcgc
      121 gcaggaagcg gatgtcgtcc gcccaaccgg atttgacttt gacccagacc ttcaaaaata
      181 ctttggtatc aaacagtttt tccatatcca accgcgcttc ggtggaaatt ttcttcaaac
      241 gttctccgcc tttgccgatt aaaatcgcct tttggctttc cttatcgacc aaaacggcga
      301 tatagatgcg gttcaaaccg tcttcctctt caaactgctc cacttcgacg ttcatcgcat
      361 aaggcaattc ctcgcccaaa tagcggaaca atttttcacg cacgatttcc atcgctaaaa
      421 aacgcgccga tttgtccgta accatatctt cgggatacat cggcacgctt tcgggcagat
      481 acggcttgag cagctccaac aggttggcaa tccgcaatcc gtgtttcgca ctgaccgcct
      541 ccgccgccgc aaattcaaat tcggcgcgca cttgggcaac aaacgcctcc agcgcgtaac
      601 ggtctttcgc cttgtccttg tcgattttgt tgaccactaa aatgaccggc gtgtgcttgg
      661 gcagttgttt caacacgaca cggtcggcat cggtaaagcg catcgcttcc acgacgaaaa
      721 ccaccacatc cacgccgcca agcgcctcgg taacgttttg attcagcctg tcgttgagcg
      781 cgttgcggtg gtcggtttga aagccgggcg tatcgacaaa cacgaactgc gcggtatcgt
      841 cggtataaat ccccgttacg cggttgcgcg tcgtctgcgc ctttttgctg gtgatgctga
      901 ttttctgacc gatgagatgg ttcatcagcg ttgatttgcc cacgttcgga cgaccgacaa
      961 tcgccacgaa gccgcaacgg tatccgccgg cggcgcgttc ccctgcaagg aaggtttcaa
     1021 tatccatatt cgctttcata tccacatttc agacggcata ttcacgcgcc gcctcatttc
     1081 tttttcttct tcagcggcag cttctcttcc agccatttca aagcctcttt cgccgcctcc
     1141 tgttccgccg ccttgcggct cgtccctttg gcacggcaca cgaaacccag ttcgcccaaa
     1201 tcgcaggaaa ccacaaacat actgtcgttg gcatggccga tttgctcttc gatacggtat
     1261 ttcggcaaag caaagcggcg tgcctgcaac gcctcctgca aagcagtttt gccgtctttt
     1321 gcctgatttt ggaaatcggc acaccggacg cggtcggcaa acaaatggcg caccaccttt
     1381 tccgccgtgt tgaaatcggc atcgaagctg accgccgcaa acatcgcctc catcgcgtcc
     1441 gccagtatcg aaggccgtct gaagccgccg ctcttcaact cgcccgcccc caagtacaga
     1501 ccgtcgccga cattcatttc cgccgccatt tccgccagca cgccctcatt gaccagactt
     1561 gcccgcaacc gcgacaactc gccctcggtc aacttcggaa acgtgtcaaa cagcatccgc
     1621 gccaccgtat aattcaaaat cgaatcaccg acaaactcga accgctcgtt gtgcttcgca
     1681 tgatggctcc tgtgcgtcaa agcctgccgc aaaagcgaaa tatcgcggaa cgcgtagccc
     1741 agtctcttct gtatcgccgc gtgtgcctgc tgtttcaaaa catcgtcttt cattaccgtc
     1801 ttccgcaaaa aacagcccga atgcgtttcc atactccaaa aatacagaaa caccttaagg
     1861 ctgcaaacgg cgcacattgt accaccaaac cgccgccgtc tgccgacaac gcacgaatcg
     1921 tggtaaaatc cgtaagtttt cccccaacgt attcccgtaa tgaacgcatt tgcacaagca
     1981 ctttcctcgg cactcgaccg ctgtatcgcc accaacaccg tcgccaaaca aaaccggccc
     2041 gtcggcttcc tctaccgcga agcccccgtt tttgaaaacg acagcggctg gcgtttcttc
     2101 agcggcgacg agaccgacga atacaccgac gatccggaca acttcagcat cgtcagcctc
     2161 gccgacatcg ccaaaaccaa ccctgaaacc gccgcactgc tctcccaacc cgaaggcagc
     2221 gcatgggagc ttgccgaaga cggcacattc caaaccgtcg ccgactggca gccgcaagac
     2281 tgaaaccttc agacggcatt ccgaaacctc cgaataccaa aggacaccca atgaacacca
     2341 tcgcccccaa cctcgacggc aaacacctcc gcatcggcat cgtacaggca cgcttcacca
     2401 acgaaatcgg cagcgaaatg ctcaaagtct gctgccgcac cctccaagaa ttgggcgtgg
     2461 cagacgaaaa cattaccgtc gccaccgtac ccggcgcgct tgaaatcccc atcgcgctga
     2521 tgaactttgc ctcttccgaa aagtttgacg cactgattgc catcggcgtc gtcatccgtg
     2581 gcgaaaccta ccatttcgag ctggtttcca acgaatccgg agcaggcgtc agccgcgtcg
     2641 cactcgacta caatatcccg attgccaatg ccgtcctaac caccgaaaac gacgcgcagg
     2701 caatcgaacg gattgaagaa aaagcctcgg atgccgccaa agtcgccgtc gaatgcgcca
     2761 acctcgtcaa cctgctgctc gaagaacagt ttgaagacga agaataacaa acagggcgta
     2821 caccaatacg ccctttccgt ttcagacggc ataccgtgcc gcccaaccgt ttcaaggaaa
     2881 aatcatgaaa acagcccgcc gccgttcccg cgagcttgcc gtacaagccg tttaccaatc
     2941 ccttatcaac cgcaccgccg cgcccgaaat tgctaaaaac atccgcgaaa tgtccgactt
     3001 tgccaaggca gacgaagaat tgttcaacaa acttttcttc ggcacgcaaa ccaatgcggc
     3061 agagtatatc cgacaaatcc gcccgctact tgacagggac gaaaaagacc tcaaccccat
     3121 cgaacgcgcc gttttgctga ccgcctgcca cgagctgtcc gccatgcccg aaacgcccta
     3181 ccccgtcatt atcaacgaag ccatcgaagt taccaaaacc ttcggcggca cggacgggca
     3241 caaattcgtc aacggcatcc tcgacaaact cgccgcccaa atccgccccg acgagcccaa
     3301 acgccgttga tgcatcacaa atttaaagaa agttctatgt ccttatttct gctttctttg
     3361 tttcgtcatt cccacgcagg tgggaatttg gttttttgaa ttttgggtat ttcaaataaa
     3421 ttctgaaact tcaatctcgt cattcccgcg caggcgggaa tccggttttt tgagttgctg
     3481 ccgtttttga taaactctgg tcgcatcgaa tttctggatt cctgccttcg tgggaatggc
     3541 gaaatttgaa aattgtggga atttatcgga aataaccgaa acgtaacaaa ctcaaacgcc
     3601 gttgacgtat caatcagtca gcaacacaaa tgccgtctga aagccctccc ttcagacggc
     3661 attttgtttc cagcccatca atactgcacc gtccagccga tttcgccgcc cgcgcgcatc
     3721 gggacaagtt cgccgtcgcc gtagggaaca cttgcgggaa cggtttggct ttgtttgacg
     3781 agggtgatcg tgtcggtatt ttcaggaatg ccgtagaacc ttgcgccgtt ttttgaggcg
     3841 aaggcttcga gtttgtccaa cgcgcctgct ttttcaaata cttcggcgta aagctcgata
     3901 gcggtcatcg cactgaacat accggcgcag ccgcaggcgt tttctttggc ggatttggcg
     3961 tgcggcgcgg agtcggtgcc gaggaagaat ttatgcgcct tctcgccggt aacggcggcg
     4021 accaatgcct gacggtgggt ttcgcgtttg agtacgggca ggcagaaatg atgggggcgc
     4081 acgccgccga ccaagaggtc gttgcggttg agcaggaggt gttgcggggt aacggtggcg
     4141 gctacgttgt cgcctgcttc caaaaccagg cgggcggctt cggcggtggt gatgtgttcg
     4201 aacacgactt taagattcgg cacttgcgcc aaaacgggtt tcatcacgcg cccgataaag
     4261 gcggcttcgc ggtcgaagat gtcgatttcg gggtcggtta cttcgccgtg aacgaggaac
     4321 aaaatgccct gtttcgccat ttcttccaac acggggatga gcttgaacag gtcggttacg
     4381 ccggaatcgg aattggtggt cgcgccggca gggtagagtt tgaaggcgac gatgccggcg
     4441 gctttggctt cgcgtacaag ttcgggcgtg gcgttatcag tcaaataaag cgtcatcaac
     4501 ggctcaaacg cgctaccttc gggcaacgcc gccataatgc gcgctttgta ggcaagcgcg
     4561 tcggctacac tgacgacagg cggtttgagg ttgggcataa tgacggcgcg ccccatttgg
     4621 cgggcggtat aaggggcaac ggctttgagc gcgtcgccgt cgcgcaggtg caggtgcata
     4681 tcgtcggggc ggataatggt cagggtttgc atggttgttc ctttttaggt tttggctgcg
     4741 tttgaatacc cggtcgattc catccgtttg ccgggggaaa gccggttatt ccgtccggtc
     4801 ggaaaccggt tccattggat gaaaggcatt ttgtccgact gattgggttg catcaacgga
     4861 atcttcaaac acagccttta gattttgatt gtgcttgggt tttgcttctt tgccgacggc
     4921 aaggcggtta acagccattc cggaacaaat cggcggcgat acgcccgaaa tgccgacact
     4981 gcacgccgga cggtttgttt ttgaaacggc acgcggcaca tacgatattc aaaaacaacg
     5041 ccgtcgggcg ggacatccgc atttcagacg gcatttattt gtgttggacg accagcgtga
     5101 acacgccgtc ctgttcggaa gcatccaaca gcacatgacc ggtttggcgg caaaaagcct
     5161 caaaatcccc cggtgcgccg ccgtcggttg ccagaacggt caacacgtcg ccctgctgca
     5221 tttgcgccaa agcctttttc gcccgcaaaa tcggcagggg acatttcaat ccggttacgt
     5281 ctaaagtttc gctgttcatc gtttgtaccg tttaaaaaat gggaatcggg gggagattat
     5341 accccagttg cttgcagccc cctttgccaa cccataaaat aacgccgttt tcaatttgga
     5401 gaaacttatg cgccgcaccg ccctcctgct gctcgcactc gccgccggca cgtccctcgc
     5461 tgccggcttc agccaaaaag acacgccgat caacacccgc taccgcgaaa cgcccgaaga
     5521 ggccgccgcc cgcgaattta aagaacatac cgccaaactg ccgccgctgc ccgatacgca
     5581 ctcggacggc tggttcgaca tttatgtgga tgaaaattac ggcaaacagc cgaaaatcct
     5641 gctcgacagc ctgcaaatta tgcccgcgcc cgacggcagc atccgctaca ttctcaatat
     5701 ccgctccgac aaaggctacg acaacctgac tgccgaaggc atattctgcg cccgcttctc
     5761 catcaggttc ggcaacggca aaccttcctc ctataaagtg ttcggctacg gcgacacggt
     5821 caaccgccgc tggatacagc cccgaaacgc cgaatggaaa ccgataggcg gtacattaag
     5881 ccgcaacgac gcactgcgca ccgtcctgta tcaggcattc tgcgagggcg gtgtacccgc
     5941 cgacacgaaa ggtttggtac aacgcctgaa agaacgtgcc ggacgctatg ccccgtcgat
     6001 aaagccgcac aacaaataac cagacacaaa aataccgtct gaaacatcgg tttcagacgg
     6061 tattcgattc atcagccatc aagcggcgga aactttgtcc tgacggcaca acagcgtaat
     6121 caaatcactg atgcgccgct tcatatcgcg gcggtcgaca atctggtcga ttgcgccttt
     6181 ttccagcaaa aactcggcgc gttggaagcc ttccggcagc gtttcgcgca ccgtctgctc
     6241 aatcacgcgc ggaccggcaa agccgattaa tgcattgggt tcggcaagca cgacatcgcc
     6301 caaaaatgcg aagctggcgg atacgccgcc catagtcgga tcggtcaaca ccgatataaa
     6361 tggcaggcgt ttttccgtca gcaaatgcag cgcggcactg gttttcgtca tctgcatcag
     6421 cgagtttaca ccctcctgca tacgcgcacc gccggaagcc gccacacaga cgaacggaca
     6481 attgtcggca accgcccgac ggataccttg tacgaatcgt tcgcccacaa ccgaacccat
     6541 cgaaccgccg ataaagcgga attcaaacgc ggcaacgacg acgggcagac cgttcatctt
     6601 gcctttcatt accaccaaag catcatcttc cccggtcagc ttgcgtgccg cactcaaacg
     6661 atccggatat tttttgctgt ctttaaactt caaaggatcg gtcggtttga catttccggc
     6721 aatctcctcc ctgccttcct catccaaaag cagattcagg cgttgtcgtg ccgacaacgg
     6781 attgtggtgg ttgcatttcg gacaaacctg attgttctgc tgcaactcgg tcgaataaac
     6841 ggttgccgaa caagacggac atttgtgcca caaaccctcg ggaacattgg aagaaccgtc
     6901 tttgctgcgg tttttgattt tgggtggcag gattttatct aaccagctca tggacaactc
     6961 ctaaaatatt caggatgagg aaccgccgtc agcgcacggc atccttcaac tctttgacca
     7021 aagcaccgac ggccgcagcc tcgttgcccg cattgttttc aatctctttc acaatccagc
     7081 tgccgacaat gaccgcgtcg gcaacccggc cgattttgcg cgcgctttcc gcattgctga
     7141 tgccgaaacc gacaccgatg ggaatatcga tatactgatg caaatactct attttacgcg
     7201 aaacctcatc cgtatccaaa cttgccgcgc ccgttacgcc cttgagcgaa acataataga
     7261 caaatccgcc tgccagctcg gcaatggttt taatacggtc ttccgtcgtc gtcggcgcaa
     7321 tcaggaaaat acagtcgacc ccgttatcct tcagctcgcg atagagcgga tcgatggttt
     7381 cgacagggga atccaccgtc aacacgccgt ccacacccgc ctttgcggct tcctgagcaa
     7441 actcccgata acccatctta tgtacagggt tcaaatatcc catcaaaaca accggcgttt
     7501 gcgtgtcggt ttcacggaat tttctgacga catccaagac atcgcgcagc gaaatcccgt
     7561 ttgccaacgc ccgctccgcc gcacgctgaa taaccggccc atccgccatc ggatcggaaa
     7621 acggcacacc caactccaaa atatccgcac cgtttgcaac catgccgtgc atcaatgcca
     7681 aagttgtccg aatatcgggg tcgcccaccg taatataggg aatcaatgcc tttccgccat
     7741 ccaaagcggc aaaagcctgc cggattctgc tcatttgtct cttccatcct atcggcaaat
     7801 atgccataaa acacaatcag taaatttttc ccagtataac atttgcggta cggataggcg
     7861 aatacggcaa acagaaacca cgcaaatcag agccgccgtt tgaacgaggc ggaaataaac
     7921 ggcaagcatc tcggattata gtggattaac aaaaatcagg acaaggcggc gaagccgcag
     7981 acagtacaaa tagtacggag ccgattcact tggtgctcca gcaccttaga gaatcgttct
     8041 ctttgagcta aggcgaggca acgccgtact ggtttttgtt aatccactat aacaaaattc
     8101 agaatcaaga cagggcaata ccatactggt tttgcaccaa cccgctataa aattgcataa
     8161 aaaatagaca ctgtaaaaca cagcgtctat tttttatctg gcggagtaag agggattcga
     8221 accctcgatg caggttgacc ccacatgctt ccttagcagg gaagtgcctt cagcctctca
     8281 gccattactc ctaaggaagc tgtaactata atcaactttt ccgataccgt caaggaaaaa
     8341 tggaaagcaa atattaatct tttgaaataa aataagattt accctgatta tacccaatca
     8401 ggcacttctt ttcttcctga atggaaatat tcctgactgc cacatcctca agcaaaatgc
     8461 ttttgtgcat cctgtttgat ttcctgaaac cacgcgtctt caggaaaacg tgcaagcgcg
     8521 gcatccaatg ttgacagtag gttttgcgac agggctttgg tcaggtattc ttcctcgttg
     8581 gcttctgccg ctttgtcggg ctgttgtgcc aaaccgtcgg cacgggcttt gtgtccgtgt
     8641 gccaa
//
LOCUS       DAXHRP010000083         8566 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.083, whole genome shotgun sequence.
ACCESSION   DAXHRP010000083 DAXHRP010000000
VERSION     DAXHRP010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8566
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.083"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(183..911)
                     /gene="rmpM"
                     /locus_tag="ACFM72_001344"
     CDS             complement(183..911)
                     /gene="rmpM"
                     /locus_tag="ACFM72_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HFC6257901.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1275..2225
                     /locus_tag="ACFM72_001345"
     CDS             1275..2225
                     /locus_tag="ACFM72_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HFC6257902.1"
                     /translation="MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGR
                     LSCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2338..3072)
                     /gene="fnr"
                     /locus_tag="ACFM72_001346"
     CDS             complement(2338..3072)
                     /gene="fnr"
                     /locus_tag="ACFM72_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HFC6257903.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3277..4698
                     /gene="hemN"
                     /locus_tag="ACFM72_001347"
     CDS             3277..4698
                     /gene="hemN"
                     /locus_tag="ACFM72_001347"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HFC6257904.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(5051..6625)
                     /locus_tag="ACFM72_001348"
     CDS             complement(5051..6625)
                     /locus_tag="ACFM72_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HFC6257905.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            6950..8050
                     /locus_tag="ACFM72_001349"
     CDS             6950..8050
                     /locus_tag="ACFM72_001349"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HFC6257906.1"
                     /translation="METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDEKE
                     TRVVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADARQMYICGGGIRNPVLMADLAEYFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            8170..>8566
                     /gene="mafA"
                     /locus_tag="ACFM72_001350"
     CDS             8170..>8566
                     /gene="mafA"
                     /locus_tag="ACFM72_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC6257907.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALT"
BASE COUNT         2149 a         2446 c         2085 g         1886 t
ORIGIN      
        1 gaatccgaac ctgcacctcg attctgacga tagccgtttc agaaaaccac ccaaaaaaac
       61 aaaccccgca aaagcggggg tttgtttcac atcatcgatg ccggccgacg tttcacgaat
      121 attgcaacag tacccggtac aaaatccgct aacctcatgc atcggcaaga tattgcctag
      181 ccttagtgtt ggtgatgatt gtgtgccggc acaacctgac gggttacgat gctgcggatt
      241 ttcacatcca cacggcggtc aggttcgata catgcaatca gagcctcacg ttttttggct
      301 ttagagactt tcgcacccag tttggcaact tcggcttcac aaacttgagt catttgcgct
      361 tgagattcgc ccaagccgac agcagaaatt ctagaaacag gtacgccgtt gctgaccagg
      421 ttgtttgcca ctacgtatgc gcggcgttcg gacagggcct gattgtattt gtcagaaccc
      481 ataaagtcgg tatggccttc gacgcggaca gattggatat tggttcgact caggcgttgc
      541 gccaatactt tcaggttgtc ttgagcttcg gcgcgcaatg aatccttatc gaaaccgaac
      601 agggttttgg cagacaggga aatggtttca tcaacatatt gcggagcctg ctccacaacg
      661 acgacaggcg cgggtgcggg ttcgggttct ggctcgggtt cgggggcagc aaccgcatcg
      721 ccgcattcta cgcgaccttg gcttgcttta tcaaagtagg cgtttttcca gcattcgcca
      781 tagttgttgc gtacgatttc gttcgactgg ccgcttacgg tgtaaccctg aacggacgcc
      841 tcgcccgcaa cagcagtgcc ggaagcgagc aatgcaacga ataatgcgct taatttcagc
      901 tgtttggtca ttttattccc tcattaaatt tgtacagcag atacagaagc aactgctgaa
      961 ttgccaacat acaggccgct gtagaaacat ggcggcaaat cggatatttc agtctccact
     1021 ataaagaagc agggggagga ctgtcaatac tcaacgcctg aaaacaaccg taaaacagcc
     1081 tgtttcctga tagtctatca tgccgaaaaa tcaattccgt gtcattactt tagggggatt
     1141 ttttccatat cgcacgattg ccgttgcaca aaaacaacaa acacaacagc aaagccccat
     1201 accgtaccgg caagaaaata tgataaatta taaacaatgt tcagccaccc gacacagacc
     1261 cacaccgacc cgccatgaaa ttacaacaat tgaaatacgc cttagaagtt taccggcaca
     1321 acctgaacgt ttccgaagcg gccgaagcct tgtttacttc gcaacccggc atctccaaac
     1381 aaatcaaatt gctggaagaa gaaatcggca ttcagatttt tatccgcagc ggcaagcgcg
     1441 tggtttcggt ctcgcagccg ggcaaggtgg ttttggatat tgcagaacgt attttgcgcg
     1501 atgttcagaa cattaaaaat atcggcagcg agtttaccgg acaggacagc ggttcgctga
     1561 cggttgccac gacgcatact caggcacgct atgccctacc cttgattgtt gccgattttg
     1621 tgaaacgcta tccgaaagtc aacctgacca tcaaacaggg gagccctgcc gccatcgccc
     1681 aaatggttac ttcgggagag tctgatttgg caattgttac ggaacgtata gacgaccacc
     1741 ccgaactggg aagactttcc tgctacgact ggacacacgc ggttatcgta ccgaacgacc
     1801 accccttgct cgaatgcaga aaccccctcc gtattgaaga tttggcgagg tttccgctga
     1861 ttacttatga atttgcattc aatgcgggca gcagcatcgc gcgggcattt tccaaagccc
     1921 gtttggaaca gccggatgtc gcattggcgg cggcggatac ggacgtattg aagacttatg
     1981 tgcgcttggg tttgggcgtg ggactgatgg cgaaaatggc gtacaacccg gatacggacg
     2041 gcgatttgca gcttgtggat gcggcacacc tgttcgagcc gtcgccgacg tggattgctt
     2101 tgcgcagcga tacttatttg cgcggatatg cctacgactt tatccaagcg tttgcgccgc
     2161 acctgacacg cgagaaggtg gataggattc tgtacacgcc catcagcgag gatttttcga
     2221 tttaggcggc tgccggtttt cagacggcac tttgcggcag atacaacaaa caggacagat
     2281 gttttcgtct gccctgtgtt tattgagaat gccgtctgaa atgttcgtac gggttaatca
     2341 aatggcgtgc gaacaaccgg ataccatctt cttcaacacc tgcagattga ggatcttgat
     2401 gtgtttgtgt tcgacggaaa tcaatccttc ctgatggaac ttggataatg tgcggctgac
     2461 ggtttcaagt ttcagcccga gataactgcc gatttcttcg cgggacattc ttaagatgaa
     2521 gtcgttggca gcaaaacctc gggaataaag gcgttgggaa aggttcagca ggaaggcggc
     2581 aatccgctct tcggcgcgca tattgcccaa cagcagcata acaccttggt cgcgcacgat
     2641 ttcacggctc atcatgcgga agaagtgcgt acgcaggctg gggatgtttt gccccagttc
     2701 ttcgatgtgg gtaaacggca gttcgcacac ttcgctgtct tccaaggcga ccgcgtcgca
     2761 actgtgcaca tgggaacaga tgccgtccat gccgatgagt tcacccgaca taaagaaacc
     2821 cgttacctga tcgcggccgt cctgactggc gacggttgtt ttgaagaagc ccgaacggat
     2881 ggcaaagagc gaggtaaagg cttcgccgac acagaacagg tattcgccct ttttcaggcg
     2941 gcggctttga cggatgacgg catcgagttg gctgagctcg ttgggcagca gcccgacagg
     3001 caggcagagt tcccgcaaag aacaggaaga acacagcgtt ttcatctgat gtgtagtatt
     3061 atgcgaagcc ataccgtacc tttttgtgcg ctttgcccca tcatgattat agtggattaa
     3121 atttaaacca gtacggcgtt gcctcgcctt gtccttattt aaatttaatc cactatatgt
     3181 gcttattgac acatatcaag acaggtttat catactgtgg cattctacca aactatccaa
     3241 aatttgacta acatcataaa atcgcacaca cacaccatga aaatcattca gatacagaac
     3301 aatcacaatg taaacgatga ccgccccgag tttgaccgcg cgctgattgc cagcctgccc
     3361 gccagcggtc cgcgctacac ttcctaccct accgccgacc gtttccacga cggtttccgc
     3421 gaaggcgaat atatcaaagc tttacatttg cgcggtatgg gcgcgttaaa caaaccgctt
     3481 tccctttaca ttcacattcc gttctgcaac accatctgct actactgcgg ctgcaacaaa
     3541 atcatcacca aagacaaaag ccgcgccgat gcctacatcg aatatcttga aaaagaaatg
     3601 gaactgctcg ctccacatct gaacggacgg caccagcttg cccaactgca cttcggcggc
     3661 ggcacgccga cctttttgag cgacgaacag atcgaacgtg tcttccgcat gatacgcaaa
     3721 catttcgagt taatccccac cggcgaatac tccatcgaaa tcgacccgcg caaagtcagc
     3781 cgcgacaccg tcctcatgct cggcaggctc ggcttcaacc gcatgagcat cggcattcag
     3841 gatttcgacc ccaaagtgca ggcggcggtc aaccgcatcc aaagttacga agaaaccaaa
     3901 gaagtcatcg atgcggcgcg cgaagcgggg ttcaaatccg tcagcgtcga tttgatttac
     3961 ggcctgccgc accagacttc ggaaagcatc aaaaccacca tcgataccgt tttgtcgctc
     4021 gatcccgacc gcctcgccct ttatcactac gcccacctgc cgcacgtgtt caaaccgcaa
     4081 cgccgcatcg ataccgccgc cgttcccgac agcgaagaga agctcgatat gctgcaatac
     4141 tgcgtccaaa ccctaaccga acgcggctac gtcttcatcg gcatggatca tttcgccaaa
     4201 cctgacgacg aactctccat cgccctcaaa gaaggcttcc tccagcgcaa cttccaaggc
     4261 tattcgacct acgcggattg cgatttggtc gccatcggcg tgtcgtccat cggcaaaatc
     4321 ggcagcacct attcccaaaa cgaacgcgac atcgatgcct actatgccgc catcgacgaa
     4381 ggcagactgc ccatcatgcg cggctaccag ctcaatcagg acgacatcct gcgccgcaac
     4441 atcattcagg atttgatgtg ccgtttcgcg ctcgactatc ggatttacga aagtatgttc
     4501 ggcatcccgt tcgaccgcta cttcaaagac gaactggcgg atttggaaaa actcgccggt
     4561 ttgggattgg tgcgcctgaa cagccacggg ctgaccgtta ccccgaaagg acgcttcctc
     4621 atccgcaaca tcgccatggt cttcgattac cacctgcgcc ataaagaaac caaggcgaaa
     4681 tattcgcaaa cggtgtgatt gtggctaacg tacaaatgcc gtctgaaagg ctttttcaga
     4741 cggcattttg ctgccggcag gataagtgtt ttcaagaaca ggcggcggca tatcataacg
     4801 ttccgcacct ttgtgtccga ccgttccgaa accaagatat agtggattaa caaaaaccag
     4861 tacagcgttg cctcgccttg ctgtactatc tgtactgtct gcggcttcgt cgccttgtcc
     4921 tgatttttgt taatcactat accaaacggc atatcccgac agaacagatt gtgcataagg
     4981 cacaagcccg cacattccat caacaaaatg ccgtctgaac acgggttcag acggcatcag
     5041 tattttacaa tcagaatact gcctgtaaaa ccaagtagca gacaaccgac aatacggcgg
     5101 cggcaggcag ggtaatgacc cacgccaaac cgatgggctt catcagtttc cagttggcat
     5161 tgcggttgac cagaccgatg ccgagtaccg cgccgaccaa gatatgcgta ctggacacgg
     5221 gcagccccat cagcgacgcg cccatcacga cggatgcggc ggacagttcg gcggtaaaac
     5281 ccgaggcggg gtgcatttcg gccaaactcg taccgacggt tttaatcacc tctttaccga
     5341 caaaccacaa accgacaatc agcgcgatgc cgaaagtcag catcgcaatc ggggggacga
     5401 cattttgcgc ggcaacgctg ttggtacgca aaacatccat aatcgcggca aacggaccga
     5461 tggcgttggc gatatcgttc gcaccgtggc tgaatgcgaa gccgcaggcg gtaaagacct
     5521 gcatccatga aaacatctga aaggtcgatt tgcccaagtc tttacgcttg aggcttttgg
     5581 caaaaacaaa cgtccccatc cacaccgccg cgcctatcat aaagatggtc aggaagctgt
     5641 tgacgttgct catccccaaa tgcaggtttt tcaagccctt gaaaatcagc atagcggaaa
     5701 tcatcatcgc gccgaacgaa gcgataaagg gaatccaaga atgcagtgcc ttgtaggaat
     5761 cgacattgtt tttacggttg tcgaacgcat aaagaccgcg gtaatactcc gattgcagct
     5821 cttgcggatc gaattcgggt tcgtcgtaaa tttgcgcgtc gtgcgccatt ttggtggcgt
     5881 actcgacttt ttcggcttcg gacaaaccct cgaaaaacag gcggtgccgt tctttatagg
     5941 cctttttttc ctgcttgatg cccttgagcg tgccttccgc ccaagcgttg taatctaaga
     6001 cgtttttctt gacgcgcgaa aacaggaaat aggacaccgc gccgcccaac acgggcgaca
     6061 atacccaaga aacaccaata ccgcccagct tgccccaacg tatcaaatcg cccgatgcgg
     6121 catcgttcat taccgccata cataccgcgc tgccgacaat gccgccgata atggaatggg
     6181 tggtagatac cggaagccct tttttcgagg caaacaacag ccacaacgcc gccgccaaaa
     6241 gcgcggacat cataataaac acaaactgta tgggttcgaa atcaacaccc ttcaaatcga
     6301 cgatgccttt gcgtatggta ttggttacct cgccgcccgc gatgaccgcg ccgctgacct
     6361 caaataccgc cgcaatcagc aaagcctgcg ggatggtcag cgtacccgca ccgacgctgg
     6421 tgccgaaaga attggcaaca tcgttgccgc cgatgttgaa cgccataaac acgccgaaca
     6481 tcgtggcaat aatgaataag gcggcgtaat tgtaatgggt ataacccaag ccccaataaa
     6541 taaaatagcc gactgtacct accagcatgg cggcaaagac ggcgttgatg gttttaacat
     6601 ttgcgctcat ttggatttga gccatggcaa tcttccttta atgtggtgga aatcatgagt
     6661 gttgccgaca ctgtactgct gcctccggtc gaactgccgt ttcgggatat ggcagacgca
     6721 tccttccttc tgaaccgcat ccgaataccc ccaaacctga ccgaatgcaa aactgctgcc
     6781 ggaaacggtt tgtatgacac ttctactact ggatgttgcg ggcgcattat aatatttttc
     6841 catccgtctt gaaacattta tttacacttt atttacactg cggcggcaaa tcagtatacg
     6901 agcgtcaata cacgttaaaa tggcgttttg caccagtttg ggagtgatga tggaaacaca
     6961 gctttacatc ggcatcatgt cgggaaccag catggacggg gcggatgccg tactgatacg
     7021 gatggacggc ggcaaatggc tgggcgcgga agggcacgcc tttaccccct atcccgacag
     7081 gctgcgccgc caattgctgg atttgcagga cacaggcgca gacgaactgc accgcagcag
     7141 gattttgtcg caagaactca gccgcctata tgcgcaaacc gccgccgaac tgctgtgcag
     7201 tcaaaacctc gcaccatccg acattaccgc cctcggctgc cacgggcaaa ccgtccgaca
     7261 cgcgccggaa cacggttaca gcatacagct tgccgatttg ccgctgctgg cggaacggac
     7321 gcggattttt accgtcggcg acttccgcag ccgcgacctt gcggccggcg gacaaggtgc
     7381 accgctcgtc cccgcctttc atgaagccct gttccgcgac gagaaagaaa cacgcgtggt
     7441 actgaacata ggcgggattg ccaacatcag cgtactcccc tccgacgcac ccgctttcgg
     7501 cttcgacacg gggccgggca atatgctgat ggacgcgtgg acgcaggcac actggcagct
     7561 gccttacgac aaaaacggtg caaaggcggc acaaggcaac atattgccgc aactgctcga
     7621 caggctgctc gcccacccgt atttcgcaca accccaccct aaaagcacgg ggcgcgaact
     7681 gtttgcccta aattggctcg aaacctacct tgacggcggc gaaaaccgat acgacgtatt
     7741 acggacgctt tcccgtttta ccgcgcaaac cgttttcgac gccgtctcac acgcagcggc
     7801 agatgcccgt caaatgtaca tttgcggcgg cggcatccgc aatcctgttt taatggcgga
     7861 tttggcggaa tatttcggca cacgcgtttc cctgcacagc accgccgaac tgaacctcga
     7921 tccgcaatgg gtagaagccg ccgcatttgc gtggttggcg gcgtgttgga ttaaccgtat
     7981 tcccggtagt ccgcacaaag caaccggcgc atccaaaccg tgtattctgg gcgcgggata
     8041 ttattattga gcgcaaatgc cgtctgaaag cccgttccgc cgctcagacg gcattttttc
     8101 ctctttcatt tacaaaccct taaaatccct ttacactcaa aatccgttca acatcaaaca
     8161 aaccctgcca tgaaaaccct gctcctcctc atccccctcg tcctcacagc ctgcggcaca
     8221 ctgaccggca tacccgccca cggcggcggc aaacgctttg ccgtcgaaca agaactcgtc
     8281 gccgcatcgt cccgcgccgc cgtcaaagaa atggatttgt ccgccctgaa aggacgcaaa
     8341 gccgcccttt acgtctccgt tatgggcgac caaggttcgg gcaacataag cggcggacgc
     8401 tactctatcg acgcactgat acgcggtggc taccacaaca accccgaaag tgccacccaa
     8461 tacagctacc ccgcctacga cactaccgcc accaccaaat ccgacgcgct ctccagcgta
     8521 accacttcca catcgctctt aaacgccccc gccgccgccc tgacta
//
LOCUS       DAXHRP010000084         8481 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.084, whole genome shotgun sequence.
ACCESSION   DAXHRP010000084 DAXHRP010000000
VERSION     DAXHRP010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.084"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(249..683)
                     /locus_tag="ACFM72_001351"
     CDS             complement(249..683)
                     /locus_tag="ACFM72_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HFC6257908.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(686..1348)
                     /gene="exbB"
                     /locus_tag="ACFM72_001352"
     CDS             complement(686..1348)
                     /gene="exbB"
                     /locus_tag="ACFM72_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HFC6257909.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1414..2256)
                     /locus_tag="ACFM72_001353"
     CDS             complement(1414..2256)
                     /locus_tag="ACFM72_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HFC6257910.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            2511..3149
                     /locus_tag="ACFM72_001354"
     CDS             2511..3149
                     /locus_tag="ACFM72_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HFC6257911.1"
                     /translation="MFQNFDLGVFLLAVLPVLLSITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3601..4401)
                     /locus_tag="ACFM72_001355"
     CDS             complement(3601..4401)
                     /locus_tag="ACFM72_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HFC6257912.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTY
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(4537..5040)
                     /locus_tag="ACFM72_001356"
     CDS             complement(4537..5040)
                     /locus_tag="ACFM72_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257913.1"
                     /translation="MDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLM
                     KIIHTYTILYILIAVIGIINGFLLRSKVLSIVKNKQKFLSDMFPLEMPFFFVEYKIPI
                     LARFLNRGMKWLYLPSFFCLVAICFSIYILNEEGGWMPYFACYWFGLCYPVSTYYVFL
                     SRDYKHI"
     gene            complement(5377..6018)
                     /locus_tag="ACFM72_001357"
     CDS             complement(5377..6018)
                     /locus_tag="ACFM72_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HFC6257914.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMTMSEKSGVPLYFDRAL"
     gene            6161..8374
                     /locus_tag="ACFM72_001358"
     CDS             6161..8374
                     /locus_tag="ACFM72_001358"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC6257915.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWLLA
                     QEHYPADAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQKPE
                     KYREIALLLDEKRTERLEYIENFLNILRGELKKYNVHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAISKIRAYIRQQNAD
                     TVREEGRVQIDKQLAKLTPKPNLQELAENLGFKKLDDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEQAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVTDLPRVLASLGDVKGVLSVTRL"
BASE COUNT         2241 a         2304 c         1837 g         2099 t
ORIGIN      
        1 tgttaatcca ctataaaaat tagaaatgca cattttcatt attctcgcgc aggcaggact
       61 ccagacttac ccatttcagt aatgtttgaa aataaaagaa aaatcagatg tttgtattcc
      121 cgcctgcgca gaaatggaga cggtgctctg tcgtctcatt tttgttttaa tcaactatat
      181 atagctgatt aaacataaga aatgccgtct gaaagacttt cagacggcat tcgttcaagc
      241 gtcgaacttt attgcgcctt ggtttcggtt acaaaaccga ttttggtgat tcctgcctga
      301 cgggcggctt ctaaagcttt gtttacataa tcgtattcca ccgccttgtc tgccgcaatc
      361 gccacaatca cgttttcatt ctgctccttg gcggctttca gacggctttc cacttccccg
      421 atttccactt tgcttgcaga atccccgccg acataatagc cgccgttcgc atcaatcgtc
      481 aggcgcaggg ggtctttagg ctgtttgtcc tgcttgtttg tctgctcgga cgcggtcggc
      541 agttccaaag ggatggaatg cgtcagcacc ggcatagtaa tcataaacac aatcagcaac
      601 accagcatca cgtccaccaa cggcgtaacg ttgatgtcgg acatcggaga atcgtcgccg
      661 gaattcatcg aaccaaatgc cataatcagc tatccttttg attaagcagg cggacgtgca
      721 aatcgtgcgc catcgcatcc aaatcctggg tcagtatttt tgtgccgcga ttgaggaagt
      781 tgtatgccaa caccgccgga atcgccacga acaaacccgc cgccgtcgcc accagtgcct
      841 cgccaatcgg gccggcaacc gccgcaatac tcatctgccc gctttgcccg atattgatca
      901 gggcgtggta aatcccccaa accgtgccga acagcccgat aaacggcgcg gtcgcgccga
      961 tggaggcaag cgcggtcatc ccgtaatcaa accggcgcat aatctgcgcc atactgttgc
     1021 ggatttgaat gaccaaatac tcgttcaacg gcaaagcctg cgccagttcg gacgcttcgt
     1081 ttcggcggta gttgcggtaa gactgcaatg cctcttgcgc cagtttggac aaaggcgcat
     1141 cgacggcgcg cactttttcg accgcgtcgt tcagcgacaa agtatcgcgc atatgccgtt
     1201 tgacggcggc attccctttg cgcgcccgat acagcttgat gcagcgcaag acaaccaaac
     1261 accacgttac gatactcatc aacagcatca acacaaacac accaatcagg acgggatcgc
     1321 ccgattcaaa cactaatttc aaattcataa tgattccaac actgaaaaaa ccaatcaaac
     1381 atccaagctg ccgcaaaccg ctgcggcaac cgcctaattc aattcaaact tgacggggac
     1441 tttaaactcc gtccaggcat tggcttgaaa atgcccgttt tgcgccgcct tgcgtgccgc
     1501 attgtccaac cgggaaaaac cactgctttt cacgatttta acggactcaa catgaccgcc
     1561 cggagaaacc aaaacgctca aaacaaccgt accctgctcg tcattctcca tagaaagcgt
     1621 gggataagcc gggcgcggaa tgctgccgtt ggcgcgtaaa ggattgcctt tgctgctgcc
     1681 ggctccttcc ccgtgttcgc ctttgacacc gccgctacct ttaccgctgc cttctccgcg
     1741 ccccgttccg tctcctttgg taccagttcc cttatcttcc ccattgccct gctcgctgtc
     1801 tgctttggca gaagcattgc cgggatgttc ggcaggtttt tcagacggct tctcgaccgg
     1861 tttttccgcc ggtttcggga caggcttcgc ttccggctta ggctctggtt tcggtttttc
     1921 ttcgggtttc ggcttttctt caggtttcgg ctcttcctta ggctgctgaa tatccgcatc
     1981 cgcctttttc gtaaccaccg gcttcaaaac cggcttgggc ggctcgacag gtttgggcgg
     2041 ctcgggcacg ggttgcggtt cgggcgcagc aggcgcgcct gcaccttcgg gggcgccgtc
     2101 ccctccgcca aaatcgccca aatcgacaaa ttcaataaca ttgcctgact ctatcacggg
     2161 cagcttgtgc gcctgccaga gcaatgccac cattgccaaa tgcagcagtg cgacggaaaa
     2221 cacgactgcg ggggttaaaa ttcgttcttt atccataatt cgggcataat aatagcaaca
     2281 attcctattt gcaacctatt tttacaattt ttggtcatat gaatgtctgt tccgttcaca
     2341 ggcaaaccgt gtttaaacgc tgtattacag caaatcatca gataacgggc cggcagaaaa
     2401 aatgattccg tctgatttct tattccaata aaatcaggtt agatgatata ttgccgcttc
     2461 tgtctgtcag ccgtttcggg ctgcacacca catctgttca aaggaaaacc atgtttcaaa
     2521 attttgattt gggcgtgttt ctgcttgccg tcctgcccgt gctgctctcc attaccgtca
     2581 gggaggtggc gcgcggctat acggcgcgct actggggaga caacactgcc gaacaatacg
     2641 gcaggctgac actgaacccc ctgccccata tcgatttggt cggcacaatc atcgtaccgc
     2701 tgcttacttt gatgttcacg cccttcctgt tcggctgggc gcgtccgatt cctatcgatt
     2761 cgcgcaactt ccgcaacccg cgccttgcct ggcgttgcgt tgccgcgtcc ggcccgctgt
     2821 cgaatctagc gatggctgtt ctgtggggcg tggttttggt gctgactccg tatgtcggcg
     2881 gggcgtatca gatgccgttg gctcaaatgg caaactacgg tattctgatc aatgcgattc
     2941 tgttcgcgct caacatcatc cccatcctgc cttgggacgg cggcattttc atcgacacct
     3001 tcctgtcggc gaaatattcg caagcgttcc gcaaaatcga accttatggg acgtggatta
     3061 tcctactgct gatgctgacc ggggttttgg gtgcgtttat tgcaccgatt gtgcggctgg
     3121 tgattgcgtt tgtgcagatg ttcgtctgac tggctttcag acggcataaa cgctccagaa
     3181 aacgcggcag gacatattgc cctgccgcgt tttcctgtag tgtaatctta tttttttcat
     3241 cattattaga accaggttgc atgataatac ctttcattaa ctgaaacact gattaagaaa
     3301 ctccagtctg tctaatgatg aggttttcac atcgccaaaa cttgccaatc aaatgctgga
     3361 tttattgccg tctgagattt ggtcaaatcc aaaggcgaca ttcttagacc ctgtgtgtaa
     3421 atcaggggta tttttgcgtg aaatcgtcaa acgcttggat gaaggcttga ccaatcaaat
     3481 accaaataaa caaactcgca ttaaccacat tttaaaaaat caagtttttg gaagtactgc
     3541 cacgtatgta ggtagctttg accgatattt gcataaaaac tcctttgctg gtgaaaggaa
     3601 ttattttgcc aattttaaaa tatttctggc accaaatagt acaatgacaa agacaatcat
     3661 gccaatgatt aaatcaggat agctagaatg agtcaataac gtcaatgctc ccgccgctat
     3721 cacaccgata ttgatgataa tgtcattgta tgtaaaaatc atgctggctt tgatatggat
     3781 ttctttattt tgatttttgc tcagtagata taagcacagc cagtttgcaa tcaatgccaa
     3841 aaatgccgtg ccaatcatca gttgataatt gggcagctgc tcagcaccga taaaacgcct
     3901 aatcacttct atcaccccaa ataacgccaa tattatctgc gttatccccg ccaaaaatgc
     3961 cacacgtttt ttatacgcca gcgtcatacc aatggctgat agcgccaata tatagacaaa
     4021 gctgtccgcc agcatatcta gactatcagc aatcagcccc atagaattag caaaaatacc
     4081 aaccgaacac tctatgataa aaaacacaaa gttaatcatg agcacttgat ataataatct
     4141 tttttctaag tgctcatcag gcttgttaaa cactatctta tcaacaatca cttcggtgga
     4201 aatgatatga ctatcaaaat taagcggttc aagtacttgt aaaatcgttg tatcttgatt
     4261 atcgtgatag acggttaagc accgcccagc aatatcaaac tgtaattcat aaatatcaga
     4321 cacatctttt aaacgcatgc gaatgagctg ttcttcggac gggcagtcca ttttggtaat
     4381 gttaaaaatg gtctttttca tctatttagt tccttgtttt gatcaggttg gctcaaataa
     4441 atctgtgttt atattgctgc ttggtaattt ttggatggtt tgagtaaatt gattaggtta
     4501 aaatttacct ttggaagtac cgccacgcat aatagtttag atatgtttat aatctctgga
     4561 taaaaaaacg taataagtgc ttactggata acaaagtcca aaccaatagc aggcaaaata
     4621 aggcatccac cccccttctt cattaaggat atatattgag aaacaaatcg caactaaaca
     4681 gaaaaaactt gggagataaa gccatttcat tcccctattc aagaatctag ccaagatagg
     4741 tattttgtat tctacaaaaa agaaaggcat ttccaaggga aacatgtcag ataaaaactt
     4801 ttgtttattt tttactatag atagaacctt gcttctcaag agaaagccat taataatacc
     4861 gatgacagct attaatatat agagaatagt ataagtatga ataatcttca ttagacaaaa
     4921 agaagaaatg gcagataaat tacatacgat atattggaat ataaaatatt tacggtctaa
     4981 accttgttca gttgcaattt ttttaaaatt gccttgcata aaaaaatcaa aggcgtccat
     5041 taaactatct ttcacattag aaatttaaaa gctaaataat acgacaaaca atgtgaagta
     5101 ctattcatgg tttatttaaa aaataatact attctgaaca ttatttagat acagaaatta
     5161 acaaattaga actaaacaag cttttaaata ctttaatttt attggaaagc tataaaagga
     5221 actataactt tacacactag tcacttcttt ttaagaggca aaagggattg ggaaggtcgt
     5281 cttggagata agcactggta tttcggccaa tggtaaatag aatttacctc aaatagggta
     5341 gaacctcctt catctgtcag ttaataacag ccacttttac aatgccctgt caaaataaag
     5401 cggcacgccc gatttttcac tcatcgtcat caaataaccc atcacctttt ggggccattc
     5461 gatgccgcgc accacggtca gattcctcaa aacggggaaa accaaaatat cctccatacc
     5521 gattccgccg ttgatgccgt ctgaagcacc gtccatcaaa ttttccaact cttgcaaatc
     5581 tgcgtttatc cgttcgaggt attgggcggt tttattcaaa ttggcggaaa agctgccgat
     5641 gcttttctct tttttgtctg taaaatattt caccgcttcc ggcgttgcaa attcaggcag
     5701 cccgattttg atcacgcgcg gctgcaccag tttgtcgttg tatccgccca ccttgtccag
     5761 ccacgcccgt atctcggggc ggacttcgtc tttcagacgg tcttcgcggt cgaaatgccg
     5821 cacaatgtcc aaactctcgc ccataaacga accgtcttct ttttgcagga cgggcacttg
     5881 tttcgcaccg atcataccga tcggcgttgc ctcgtcgtcg tttgccagca cggcttcttc
     5941 aacgtccgcg ccaaacagcc cggcagccat ccgcgcacgc acgcaaaacg ggcaatggtc
     6001 gtaaatatac agtttcatca aaatattcct cgtcaacctg tcggtaccga ctaccttaac
     6061 accccgcgcc gcccgaaaca agtttatctt cccgcctatg caccgtaaat aaataagctg
     6121 ttacaataaa ctcgttttta tcggaacgga agaccccatc atgaccgcca tcagcccgat
     6181 tcaagacacg caaagcgcga ctctgcaaga attgcgcgaa tggttcgaca gctactgcgc
     6241 cgctctgccg gacaacgata aaaacctcat cggtaccgca tggttgctgg cgcaggaaca
     6301 ttaccccgcc gatgccgcca cgccgtatgg cgagccgctg cccgaccact tcctcggcgc
     6361 ggcgcaaatg gttcatgaac tcgacctgct ccccgatgcc gtcgccgcca ccctgcttgc
     6421 cgacatcgga cgctacgtcc ccgactggaa cctattggtt tccgaacgct gcaacagtac
     6481 cgtcgccgag ctggtcaaag gtgtggacga agtgcagaaa ctcacccact tcgcccgggt
     6541 ggacagcctc gccacgccgg aagaacgcgc ccagcaggca gaaactatgc ggaaaatgct
     6601 gctggcgatg gttaccgaca tccgcgtcgt gttaatcaaa ctggcgatgc gtacgcgcac
     6661 cctgcaattt ttaagcaacg cccccgacag ccccgaaaaa cgcgccgtcg ccaaagaaac
     6721 cctcgacatc ttcgccccgc tcgccaaccg tttgggcgtg tggcagctca aatggcagct
     6781 cgaagatttg ggcttccgcc atcaaaagcc cgaaaaatac cgcgaaatcg cgctgctttt
     6841 ggacgaaaaa cgcaccgaac gcctcgaata catcgaaaac ttcctcaaca tcctgcgcgg
     6901 tgaactcaag aaatacaatg tccatttcga agtcgccggc cgcccgaaac acatctactc
     6961 catttacaaa aaaatggtga agaaaaaact cagcttcgac ggcctctttg acatccgcgc
     7021 cgtgcgaatt ctggttgata ccgtccccga gtgttacacc acgctgggta tcgtccacag
     7081 cctctggcag cccattcccg gcgagttcga cgactacatc gccaatccca aaggcaacgg
     7141 ctataaaagt ttgcacaccg tcatcgtcgg cccggaagac aaaggcgtgg aagtacaaat
     7201 ccgcaccttc gatatgcacc aattcaacga attcggtgtc gccgcccact ggcgttacaa
     7261 agagggcggc aagggcgatt ccgcctacga acagaaaatc gcctggttgc gccaactctt
     7321 ggactggcgc gaaaacatgg cggaaagcgg caaggaagac ctcgccgccg ccttcaaaac
     7381 cgagcttttc aacgacacga tttatgtttt gaccccgcac ggcaaagtcc tctccctgcc
     7441 cacgggcgcg acccccatcg acttcgccta cgccctgcac agcagcatcg gcgaccgctg
     7501 ccggggcgcg aaagtcgaag ggcaaatcgt gccgctgtcc accccgcttg aaaacggaca
     7561 gcgcgtcgaa atcattaccg ccaaagaagg gcatccttcc gtcaactggc tgtacgaagg
     7621 ctgggtcaaa tccggcaagg caatcagtaa aatccgcgcc tacatccgcc agcaaaacgc
     7681 cgacaccgtg cgcgaagaag gccgcgtcca aatcgacaag cagcttgcca aactcacgcc
     7741 caagcccaac ctgcaagagc ttgccgaaaa cctcggcttc aaaaaactcg acgacctcta
     7801 cactgccgtc ggacaaggcg aaatttccaa ccgcgccatc caaaaagcct gcggcacgct
     7861 gaacgaacct ccgcccgtac ccgtcagcga aaccaccatc gtcaaacagt ccaaaatcaa
     7921 aaaaggcggc aaaaacggtg tgctcattga tggcgaagac ggtttgatga ccacgcttgc
     7981 caaatgctgc aaacccgcgc cgcccgacga cattgtcggc ttcgttaccc gcgatcgcgg
     8041 catttcggta caccgcaaaa cctgcccctc tttccgacac ctcgccgaac aagcacctga
     8101 aaaagtgctg gacgcaagct gggcggcgtt gcaggaagga caagtgtttg ccgtcgatat
     8161 cgaaatccgc gcccaagacc gctccgggct tttgcgcgac gtatccgacg cgctcgcccg
     8221 ccacaaactc aacgttaccg ccgtgcaaac ccagtcccgc gacttggaag ccagtatgcg
     8281 gttcacgctc gaagtcaaac aagttaccga cctcccacgc gtcctcgcca gcctcggcga
     8341 cgtcaaaggc gtattgagcg ttacccggct ttaaatacaa aaatgccgtc tgaaagccgt
     8401 ataacgcttc agacggcatt ttgattgccg gggtttgcta ttttttgttg cataatcaat
     8461 taaaaacaaa atagtacaat a
//
LOCUS       DAXHRP010000085         8400 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.085, whole genome shotgun sequence.
ACCESSION   DAXHRP010000085 DAXHRP010000000
VERSION     DAXHRP010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.085"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..324
                     /locus_tag="ACFM72_001359"
     CDS             <1..324
                     /locus_tag="ACFM72_001359"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257916.1"
                     /translation="RKQIGGRPGKPAPNASGKYAYRWKTQPHPPPGVSDGTAAAGNVR
                     RLRHRRTQNRMPAPATIRQIPLFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAG
                     YRYVS"
     gene            431..955
                     /gene="nspA"
                     /locus_tag="ACFM72_001360"
     CDS             431..955
                     /gene="nspA"
                     /locus_tag="ACFM72_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HFC6257917.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1091..1480
                     /locus_tag="ACFM72_001361"
     CDS             1091..1480
                     /locus_tag="ACFM72_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC6257918.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVATLPKGVQVEAEAVLVLNA"
     gene            1557..2387
                     /locus_tag="ACFM72_001362"
     CDS             1557..2387
                     /locus_tag="ACFM72_001362"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HFC6257919.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2402..3859
                     /locus_tag="ACFM72_001363"
     CDS             2402..3859
                     /locus_tag="ACFM72_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HFC6257920.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSYIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3900..4289)
                     /locus_tag="ACFM72_001364"
     CDS             complement(3900..4289)
                     /locus_tag="ACFM72_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257921.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
     gene            complement(4471..4872)
                     /locus_tag="ACFM72_001365"
     CDS             complement(4471..4872)
                     /locus_tag="ACFM72_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257922.1"
                     /translation="MKIKPLQFSNNNHRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFDF
                     FEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
     gene            complement(5289..5618)
                     /locus_tag="ACFM72_001366"
     CDS             complement(5289..5618)
                     /locus_tag="ACFM72_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257923.1"
                     /translation="MTDKSKTEKLISSDDKQSVIDGILDMVFNSKAYEVPWISEKLME
                     LSKNKDLDIAGLSLTCFGHLARLHSNIGDYDKVIPLLHSKQDDPELQGRAEDALEDIS
                     LFLSENH"
     gene            complement(5644..6351)
                     /locus_tag="ACFM72_001367"
     CDS             complement(5644..6351)
                     /locus_tag="ACFM72_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC6257924.1"
                     /translation="MVKTADGYKAIARIRTGDRVFSKDEASGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGISNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGSQAETEGVWVHNDCPYDKGNQRYKDASYHGKNDNSV
                     KSRAPTNGQAALDNSVQVKSTSPRRVGVDKANNEIVVLNKTQTFNNGSAEYHGHVRSW
                     QDLHTDQKNALKKAGLD"
     gene            complement(6485..6802)
                     /locus_tag="ACFM72_001368"
     CDS             complement(6485..6802)
                     /locus_tag="ACFM72_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257925.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEERRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            complement(6805..8073)
                     /gene="mafB"
                     /locus_tag="ACFM72_001369"
     CDS             complement(6805..8073)
                     /gene="mafB"
                     /locus_tag="ACFM72_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC6257926.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRDVRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            complement(8077..>8400)
                     /gene="mafA"
                     /locus_tag="ACFM72_001370"
     CDS             complement(8077..>8400)
                     /gene="mafA"
                     /locus_tag="ACFM72_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC6257927.1"
                     /translation="TELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQE
                     QYALWTGPYKVSKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIR
                     RRKGG"
BASE COUNT         1964 a         2263 c         1904 g         2269 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaacc gtatgcctgc acctgcaaca
      181 atccgacaga taccgctgtt ttttccaaac cgtttgcaag tttcacccat ccgccgcgtg
      241 atgccgccgc caccatttaa aggcaacgcg cgggttaacg gctttgccgt cggcaaagca
      301 gccggatacc gctacgtatc ttgaagtatt gaaaatatta cgatgcaaaa agaaaattta
      361 agtataatac agcaggattc tttaacggat tcttaacaat ttttctaact gaccataaag
      421 gaaccaaaat atgaaaaaag cacttgccac actgattgcc ctcgctatcc cggccgccgc
      481 actggcggaa ggcgcatccg gcttttacgt ccaagccgat gccgcacacg caaaagcctc
      541 aagctcttta ggttctgcca aaggcttcag cccgcgcatc tccgcaggct accgcatcaa
      601 cgacctccgc ttcgccgtcg attacacgcg ctacaaaaac tataaagccc catccaccga
      661 tttcaaactt tacagcatcg gcgcgtccgc catttacgac ttcgacaccc aatcgcccgt
      721 caaaccgtat ctcggcgcgc gcttgagcct caaccgcgcc tccgtcgact tgggcggcag
      781 cgacagcttc agccaaacct ccaccggcct cggcgtattg gcgggcgtaa gctatgccgt
      841 taccccgaat gtcgatttgg atgccggcta ccgctacaac tacatcggca aagtcaacac
      901 tgtcaaaaac gtccgttccg gcgaactgtc cgccggcgtg cgcgtcaaat tctgatatgc
      961 gccttattct gcaaaccgcc gagccttcgg cggttttgtt ttctgccacc gcaactacac
     1021 aagccggcgg ttttgtacga taatcccgaa tgctgcggct tctgccgccc tattttttga
     1081 ggaatccgaa atgtccaaaa ccatcatcca caccgacaaa gcccccgccg ccatcggcgc
     1141 atacagccaa gccgtccgag caggcgacac cgtttacatg agcggtcaaa ttccccttga
     1201 tcccgccacc atgactgttg tcggcaacgg cgacttccgc gccgaagcgc gccaagtgtt
     1261 ccaaaacctg caagccgtcg ccgaagcggc aggcggcacg ctggccgaca tcgtcaaact
     1321 caacgcctac ctgaccgact tgggcaattt cgccgtcttc aacgaagtga tggcggaatt
     1381 tattgccgag cccttccccg cccgcgccgc cgtcggcgtt gccacgctgc ccaaaggcgt
     1441 gcaggtcgaa gccgaagccg tcctcgtttt gaacgcataa ttccacgttc ggacggcata
     1501 agatttccaa ccgtgccgtc cgaaccgcaa cactttccca cttcacaaca tctgcaatgg
     1561 cacattacgc aatcggcgac atacaaggct gtttcgacga actgaccgcg ctgctcggca
     1621 aaatcggttt caaccacggc acggacaccc tctggctgac gggcgacatc gtcaaccgcg
     1681 gcccgaaatc cctcgaaacg ctgcaattct gcatccggca cgaaaacagc gtgcaaatcg
     1741 tcctcggcaa ccacgacctg cacctgctcg ctgtcggctg cggcgaaggc gcgcccaaac
     1801 gcagcgacac aatcgaaccc atactcaaac accccgacgg aaaaaaaatg ctcgactggc
     1861 tgcgtgcgca accgctgttg atacgcgagg gcagccgcgt gatggtacac gccggcatcc
     1921 tgccgcaatg gcgcatcgcc aaagccgaat cgctcgctag agaagccgaa gccgaactgc
     1981 gcggcaaaaa atacgtcaaa ttcttctcca aaatgtacgg caacaaaccg gccgcgtggg
     2041 acgaaggttt ggaaggctat gcccgcctgc gcttcatcgt caacgccttc acgcggatgc
     2101 gcgccctgac ctttaaaaac gaactggatt tcgactacaa atccacagtg aaaaaaatgc
     2161 cgccttacct gcgcccgtgg ttcaaagccc ccgaccggca aaacctcgac cgcaccatca
     2221 tcttcggaca ctggtcctcg ctgggctaca cgaatgccga caacgtcatc tcgctggaca
     2281 ccggcgcgct gtggggcgga cagctgaccg ccgtcaacct cgaaacggaa gaaattaccc
     2341 aagtccaagc cgccggcggc atagactgga aaagcttcgc aaaataacgg accgccccac
     2401 tatgcacaaa atcctgccca tcgcccacgt cctctcccga ctgggtatgc tgttttcctt
     2461 tatcctgctg atacccgccg ccctctccta cgccttttcg gacggcgcgt acaccgcctt
     2521 cgccaccacc gcgaccgtta ccctttccgg ctcgtacatc gtccggctcg ccaccctccg
     2581 gttcaggcgc gaactgcgcc cgcgcgacgg cttcaccctc gtcctgatgt tgtggctggc
     2641 gtttgccgct atggcggcga tgccgatgta cctgtatttc ccgaatatgg gctttaccga
     2701 cgcatttttt gaatcgatgt cgggactgac caccaccggc gcgaccgtca tcccccacgt
     2761 cgacgggctc gccccctccg tcaacttttg gcggcatatg ctcaactggc tgggcgggat
     2821 gggcatcatc gtccttgccg tcgccatcct gcctatgctc ggcgtaggcg gcacgcagtt
     2881 attcaaagcc gaaatccccg gcattgacaa agaaagcaaa atgtcgccgc gcatttccca
     2941 agtggcgaaa aaactttggt tcggctacac cctgatcacc atcctcgcgg cagcctgcct
     3001 gcattttgcc gggatgggct ggttcgatgc cgtctgtcac gcgatggcga ccctctcgct
     3061 gggcgggttt tccacccacg atgccagcat agcttattac aactcccccc tcatcgaagc
     3121 ggtcatcatc gttttcacca ttgtcggcgg catcaatttt gccaaccatt tcgccgccct
     3181 caacagccgc agcctcaaaa cctattggaa agacgaagaa tgccggacga tgctgctgct
     3241 gctctccggc agcatccttg ccgccgccct gtacctgtgg cacaccggct attacgccgg
     3301 ttttaccgaa tccctgcgct acaccgcctt caacttcgtc tccatcggat tggcaaacgg
     3361 gctggccaac accgacttcg cacaatggcc gctcctgatt tccctgtgga tgtttttcct
     3421 cgccaacatc ctcgccaact ccggctcgac cggcggcggc atcaaaacca tacgcgccct
     3481 cgtcctgttc aaattcagcc tgcgcgaaat gatggtgctg ctgcacccca aagccgtccg
     3541 caccgtcaaa atcagcggca aggccatacc cgaccgcctc gcgctgaccg ttatgtcctt
     3601 catcttcatc tactttatga ccgtcgtcct cttcagcttc ctgctgatgg cgagcggtat
     3661 ggaatttacc accgccttca ccgccgtcat cgcctgcatc accaacgccg gccccggcct
     3721 gggcgaagtc gggcccgccg gcaattacgc cggtttggac gtgatgcaga aatggatctg
     3781 cgttaccgcc atgctcttgg gcaggctgga aatcttcacc gtcttcatcc tcttcacccc
     3841 cgcctactgg aagaaataaa aaatgccgtc tgaaaacttt tcagacggca tattgtcttt
     3901 taaaaaagcg gaagctctac aaaaggaaag aaatgctgaa acctctgata aatttcagga
     3961 tatttctcta aggcttttaa tgctttttct tttgaaatag gcggatcata gacatctatc
     4021 ccccttaaga aggcaatgcc cgttaatgca tttttttgat catttgaaat gtaaccataa
     4081 ttaacgactc caattacatc ataaatttcc cctatactct tatcaaaatc aatcaaatca
     4141 aaaatataca atggaattgt atcaatagga gtatctctga caactatatc caaccataat
     4201 ttaaattcag aaagattaat agcatcatag aacatacaga ctattgcaaa tcctaaatct
     4261 tcacaatttt ctttactaat tttccacata attatttacc tttatccatt gcttcccaac
     4321 cgatacatcc ggtattttag cttctccttt tccgtcaaac actcctttgg ttacctgctt
     4381 tgtgtcaaaa ataccgtctg aaagccgaat attgtttcag acggcatttt gattgttggg
     4441 tttttaatca gagctttgtt tgataatttg ttattttgaa taaaatacag gttctgtcga
     4501 gctgataact tctattacag aatcgctaaa aaagaaaata taagccttat aatatttctt
     4561 ttcaaaaaaa tcaaaacttt cttctttcaa ccagtccata taactgtcat ctattatctc
     4621 gaaaaaataa tttatagcag gatttctatc ccaatcattt ttttctttat tttcaaataa
     4681 atattctgaa aattttactt tataagattc atctgttatt tgaaaatgaa ttatattgtc
     4741 aataaatatt tcaatattta attcataatt tcggtcggat gccaaaatgt tcacatcttg
     4801 ttcggtaaca caaattttgt ctacgtaaaa tctgtgatta ttgttagaaa attgtaatgg
     4861 tttaatcttc actatcgttt tccatatctg atttttgttt tcttattgcc ctgccggata
     4921 aagcaggtct gcctccgtac tgtctatcct cacatttact ttcctgccat cggcttttat
     4981 ctccccggtt ttaccgtttt tgccaacttc gcggctttgg cggcggcaat gttgaaggcg
     5041 gcttcgacgg tttcggcggc attggggttg acccgtactc atccgcaaac ggcaacacga
     5101 cggacggtgt ttgcttttca gccgtctgcc gttttgacca aggtgctgcc gtggaaggag
     5161 caagtgtagg atttttgaag aactcagttc tcaatatcct atttcaaatg aaagaaatgc
     5221 cgtctgaaaa ttaaacacgg tttcagacgg cattttgatt gttgggtttt caacccgacc
     5281 tacggttcct aatgattttc agataaaaat aaagaaatat cttctaacgc atcttcagcc
     5341 ctaccttgaa gctctggatc atcttgcttt gaatgtagta aaggaataac tttatcgtaa
     5401 tcaccgatat ttgaatgtag cctggcgaga tgtccgaaac aggttagcga taatccggca
     5461 atatccaagt ctttattttt cgataattcc atcaatttct cagaaatcca cggtacttca
     5521 tatgctttgg aattaaatac catatcaaga atgccatcta taacactttg tttatcatca
     5581 gaagaaatca acttttctgt tttactttta tcagtcattt tttaattttt ccttttgaat
     5641 taactaatcc aatcctgctt tttttaaagc atttttctga tcggtatgca aatcttgcca
     5701 acttctgaca tgcccgtgat attccgcaga accgttatta aaagtttgag ttttgtttaa
     5761 tacaacgatt tcattattgg ctttatcaac cccaactctt cgaggagaag ttgatttaac
     5821 ttgaacggaa ttatcaagag ctgcttgtcc gtttgttggt gctctacttt tcacagaatt
     5881 atcatttttg ccatgataag aagcgtcttt atatcgttgg ttgcctttat catacggaca
     5941 atcattatga acccaaaccc cttccgtttc cgcctgactg cccttgacga agtaagtatg
     6001 ccaatcggca acggtcagat tgtaggcttt gagcggctgc tgtttgaggg taatgttttg
     6061 aaccgtctgt tttgcgccgc tttcggaaag cagggtgtcg ccttttttca gacgacctgc
     6121 ctgtatccat tttccttgac tgtaaaacgg atggatgcgg ttggaaatca gggtttggct
     6181 gttgctgatg ccgtctgaaa ctttaatgta aacggtttct tgatacggat tgccgtatcg
     6241 ggcggtaacg ggtttgtatc ccgtttttcc gcttgcctcg tccttggaga agacgcggtc
     6301 gccggttcgg atacgggcaa tggctttgta gccgtctgcc gttttgacca aggtgctgcc
     6361 gtggaaggag caggtgtagg atttttgaag aactcagttc tcaatatcct atttcaaatg
     6421 aaggaaatgc cgtctgaaaa ttaaacacgg tttcagaaga cattgtgatt gttggttttt
     6481 taacctacgc ttgcgaaatt aattcctttc tcctgaatac tgcaccattt atttggttta
     6541 actccataga agaatgatta gaataaatac attcaaagtc agcttcatca aaatattctc
     6601 cacacataga ccataactct gtaatcaaat attccatatc ttcatggtct tctgtgatgg
     6661 cttctcttga taaataattt ttgattttta aaaaccttct tctttcctcg taatctacgg
     6721 taattaacct gatatctgag tgtatcatgc ccagcattgc tatattcata ccgactcgca
     6781 gccagcttgg taatatattc ataactattg caccttttta atggttttag ggttagccgg
     6841 aacaatgtga actccatttt tacctgaatg aatcgtacca aaattggtac ttaatcctga
     6901 tttcccatcg ctgcctatag gatacccaaa atcaacaaca ggatttcctc ttgctccttt
     6961 agaaataact ggataagcac ctgaatgtat tccgttcaac aattcttgag gattaatgtt
     7021 ttgatttaaa gtactcttac cttcaatgta gtttctatgt cctgaaatat gtttcccttg
     7081 agctccatca tgaattttag tcccaataga ttttgcttta aaatcaacat tgcgggtttg
     7141 aaacatttct ccatctacag actgagataa tcttgaagca gtgttatgct tgtaggagtc
     7201 tgagaaatcc ccactaaccg cagccttccc cggttttgcc gcctttgtca ggtttttgac
     7261 tttggcaaac ggcaggacgt tgaccagggc ttcgacggtt tcggcggcat tggggttttc
     7321 ctgcatccac tggtcaacgg cttcgcccgc gctgataaag gggttaagcg cgccggcggc
     7381 gacgccgttg ataaactcca tgctgttgcc ccagcggtcg agcttggcat tgtgctcgaa
     7441 catttttctg ttggcttcat cggcgcggtc ggagaaattg ctgccgaggt tgctgtaatt
     7501 gtcggatatg cgttgtctga cgtcgcgggt gtcggtcgga ttgagtttga tactgcgggc
     7561 tgtgccgttg acgtgatagg tgtattcgtc gcgtgcgccc gtaggtttgg ggtaattgcc
     7621 gcccttcggg ccgtcgtagg catcggcggg atggtgctcg tgtccttccc agttgagccg
     7681 gtacacggta aagccttcgt caacgttgcc ttgttctttg cttgcgctgt cggcggcgtg
     7741 gttgtcgaag ggggcgtgtt cttcgtgtcc gtgtccggaa aagcggacgg tgtaaccaag
     7801 attgccttgg attgccgcct gttggatgag caggttgccc atctggtggg tatagtcttg
     7861 gatgacgttg attttgccgg tgcggtcgga aacgctgccg cgcgggtcgc cgaagaggtg
     7921 gtatttgccg ccgggttcgt agtgctgccg ttgggcgtta tcggtaatga acggatcttg
     7981 cgccaagtcc gccgcgaggg cgggctgtcc gaaagcagcg gccgctacgg cgcaggcggc
     8041 aaggaggttt gtcagtctgc gcagcggttt cacggtttat cctcctttgc ggcggcggat
     8101 gacttcgttg ccgacatcgg ggtttttacc gttgttttgt ttgaagtcgg gacggttttg
     8161 ggcggttgtg tcaccgtagg gggtgatgtc ggagaaatcg accatcaggc ggtctgaggc
     8221 tttgacggtt ttgctgactt tgtaagggcc ggtccaaagg gcgtattgtt cttggtattg
     8281 ggattcgtag gcggcggttt taggggcaat cagcagtttc cggctgtcgc ggtcgacggc
     8341 gaaatattcg agcttggttt gggctttaag ggtttcggcg ttgtagaggt gcagttcggt
//
LOCUS       DAXHRP010000086         8330 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.086, whole genome shotgun sequence.
ACCESSION   DAXHRP010000086 DAXHRP010000000
VERSION     DAXHRP010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8330
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.086"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(23..172)
                     /locus_tag="ACFM72_001371"
     CDS             complement(23..172)
                     /locus_tag="ACFM72_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257928.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVAYADVSTHRTIQKTS
                     PYVPS"
     gene            complement(190..387)
                     /locus_tag="ACFM72_001372"
     CDS             complement(190..387)
                     /locus_tag="ACFM72_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257929.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAV
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(398..1414)
                     /locus_tag="ACFM72_001373"
     CDS             complement(398..1414)
                     /locus_tag="ACFM72_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC6257930.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(1513..2727)
                     /gene="gltS"
                     /locus_tag="ACFM72_001374"
     CDS             complement(1513..2727)
                     /gene="gltS"
                     /locus_tag="ACFM72_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HFC6257931.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(2945..4351)
                     /locus_tag="ACFM72_001375"
     CDS             complement(2945..4351)
                     /locus_tag="ACFM72_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC6257932.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYTEAAFVLG
                     NHLLKNGHPEQALPWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKDHPEALKIMGD
                     LYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAIGNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            complement(4718..5977)
                     /locus_tag="ACFM72_001376"
     CDS             complement(4718..5977)
                     /locus_tag="ACFM72_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HFC6257933.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFFEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            complement(6114..8228)
                     /locus_tag="ACFM72_001377"
     CDS             complement(6114..8228)
                     /locus_tag="ACFM72_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HFC6257934.1"
                     /translation="MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLSTLLPEF
                     HIYKDGKGAEAVVGWGLRPTTHKARAFATEHQLPFIALEDGFLRSLGLGVSGYPPYSI
                     VYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQTMDFILQHHLSKYNHAPELSD
                     DHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPD
                     VLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVTSQMGFEALLCGKPLTT
                     FGLPWYAGWGVSDDRHPEINRLVQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSL
                     FDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVK
                     LSDDARILAWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSI
                     YFNAETPSRLEYILQNQNFDDQDFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTV
                     ILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISP
                     EDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLT
                     QDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNN
                     GLHRGYFAKKLGKIKQLYRSFK"
     gene            complement(8252..>8330)
                     /locus_tag="ACFM72_001378"
     CDS             complement(8252..>8330)
                     /locus_tag="ACFM72_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC6257935.1"
                     /translation="WPLQGEPNLSPKDLAGKVLAEAVTF"
BASE COUNT         1842 a         1930 c         2432 g         2126 t
ORIGIN      
        1 gaaggagcgt aacccttccg aatcaggacg gcacataggg cgacgttttt tgtatcgtcc
       61 tgtgtgttga aacatcagca taggcaacac aggaaaagcc ggctgttttg cgcctgcgta
      121 ccgtattggt caaaatgccg tctgaaaccg acaacagggt ttcagacggc atttccgtca
      181 attttctctt tatctgccga acaggttggc gatattttcc atctgttctt cggtaaaacc
      241 gttttcgccc aatctgacgg caactgccca ttcgcccgac aaaccgtgtt ccgcaccgag
      301 ctgccgccat ttttcgactt tggcttcgtc tgtggttttt tcgggcagcg gtttgacggg
      361 aatcctgctt tttgggacgg tattcatcgg tttgccccta atcgatggaa tagccgcgaa
      421 gatactgtat ccgttcgcgc gtcatccgcg tgtcgcactg caatttgagg tattcggcgt
      481 attcctgccg gtctgcctgc gcggcggctt gtcggcagtt gctgattttt tcctgcgccc
      541 acttgcgttg ttcgccgacc aactcttttt gcacgtcggt atcgagtcct ccccaaagtt
      601 tggtaatttc ggattccgca cgctggtttt gtacgcgcgc ctcttccact tcgccccgtg
      661 atacggtaac ggtatcggca cgctcgccgt cgtcaggatg caggatttcc ggttcgggcg
      721 cgccttctgc ggcttggggt acgtctgcat cccctccggc ggcattatgt tccaaaatgt
      781 cttcgggcgt gggtttggac ggttcttctt cacgggcttt tccgctcaaa atcctgaccg
      841 cgtcttcttt ttttaccgcc ttgccgtcta tcatcacgat gctcttcacg ccgtaaggca
      901 gcaacgcgac agacagcgtt tgcgccgcca taccgaccgt gttgtcgaca aatgccgtct
      961 gaccgtcttt gacgggcagg aagcggacgg ctgccgtcaa tacgccgtct ttaaactcga
     1021 cattgccgcc cgtcttctgc cgcacaatat ccgacaaagc ggtttccccg tacagcaggg
     1081 ggctgtttgc cttggcatcg gcaagcgttt cagacggcac ggtaatgttc aaatcggcga
     1141 tacagaacgt gcgcccgcct tcctgcgttt ccgaagcgtg ttccaaagaa aacgccaaac
     1201 cgtaggcggc ggcgataatt ttgtcggcat cgacaaactg cctgccgtct tcgcgcgcga
     1261 aagaacgcgc ttcctgcgtg agcgtttcct gaatattgcc gcgtatgcct tgcaacacgg
     1321 cggggttggc gcattccaat gccttgggcg gttcttccct gccgcaagcg gcaagcagca
     1381 gggcaaacgg cagcgcaatg agtttccgat acatgatgtt ccttccaaac ggtgcagacc
     1441 gatagcggct atcatagcaa aagcacctgc aggcggtaaa ccttgcaggt gctttgtcgg
     1501 aaaggcggaa aatcagcctt taaagaaatt cacaaaaccg gtgagaatcg cggcattaat
     1561 caaatcgacg aagaacgcgc cgaccatagg cacaatcaaa aacgccttat gcgacgcgcc
     1621 gaaagtatgc gtgacggact gcatatttgc caccgccgtc ggcgttgcac ccaagccgaa
     1681 accgcaatgg ccggcagcca atactgccgc atcatagtcg cgccccataa agacataggt
     1741 aacaaaagtc gcgtacaaaa ccatcaccac ggtttgtacg gcaagaatca cggttacagg
     1801 ccccgccaaa ccggtcagct cccacagttt caaattcagc aacgccattg ccaagaaaag
     1861 cgaaagcgaa gcattgccga acacatcgat ggcgcggtcg aacatattga ccttgaatgc
     1921 ggcagtgagg atgttgcgga tgaccacgcc gccaaacaga caccacacga atttgggcag
     1981 gtcgaacaga tattctttgt cgaagccgtc cataatctcg gcaaacgcca aacacgcggc
     2041 aaacatggca agcgtttcaa cggcagattc cgccgtaatc aggcgggtgc gttttgcctg
     2101 ctcgaacacg tcgtccgcgt tgtcgtcctg atcctgtttt ttgttttcaa ccggtttgcg
     2161 gcccattttg ttgatcaggc ggcgcgcaac cggcccgccg atcaggccgc cgaacaccag
     2221 cccgaaagta gccgatgcaa tacccaaacc ggttgcgccg accaagccgt attgcgtttc
     2281 aaaattaggt ccccacgcac ctgacgtacc gtgtccgccc gtcagcgaca ccgaaccggt
     2341 aatcagaccg atgagcgggt ccaaacccaa agccgtagcc agtccgaccc cgacaaagtt
     2401 ttgcaccaag ataaatccgc ccacaatcgc ggtaaaaacc accagcggca aaccgcccgc
     2461 cttcaaacgg gaaaaatccg cgctcaagcc gatggacgtg aagaaaatca gcataaacgc
     2521 attttgcagc ggtttctcaa atttgaagct cacgccgtac gcctcgtgca gcgcaaacag
     2581 gataatcgcg gcaaccaaac cgccagcgac cggctcggga atattgaagt ctcgtaagaa
     2641 tttgattttt tgaaccagaa atttaccaac cagcaacacg agcgtggcgg caatcagtgt
     2701 gtaataactg ttgaattccc attccatgtt gtttcacctc ctagaaatat ttttccgagc
     2761 atccgttttt gttccggatg tagtgtgttt caacgcttgg cgttatccgc cgagtgtcat
     2821 ggtattgatg cgcggacaag gtgttttcag aaagaaatga aaacaatggc gtgtccgtga
     2881 aaaataactg gcaaatatta ggggaatagt taaagattgt caaaaaatgc gagtgtaaat
     2941 cttttcagac ggccttttgt ccgatggcat ggtgtgcttc gcgtcgccat tgttctaata
     3001 gggatattaa tgattcggcc gaagtgtggc cgttgccgat ggcggcctgc agccagtagc
     3061 aggcggtcgg aacatgacag ccgacacctt gcccgtgata gtaaaaacag gcgaggtggt
     3121 attgggcgga agggtggttt tgttcggcag caatggcgta ccagtgtgca gccgcccgag
     3181 gatcttgcgc cgtaccgagg ccgtaatggt agatgcggcc taaggctgcc gctgcgtttt
     3241 tatggtggaa cccggcagct tccatgtaat tttttcgcgc ggcattgtag tcggcgggac
     3301 ggccgatggc gcaggcttgt gcttccgcca aacggtagat ggtttcggtt tgttgttgtt
     3361 gcagggcggc agttttgatt tgttcgtatt gttgcggatg gtacagcgcg gcgtcgctga
     3421 tgagtttttg tgctgcggcg gcagaaccca gcgcggcagc acggtggtag taatcgtgcg
     3481 cgatatggtt gtcagctttg atgccgaggc cgtagcggta gaggtcgccc atgattttca
     3541 gggcttcagg atggtctttc tcggcagcgg ctttggcata tcgtgccgct tggaacggat
     3601 cgcgttcgga aagttcgccg gtcagggcgt attgggccag cttagactgt gcttccgctt
     3661 gttccttatc ggcggcacga cgataccatt ccaaggcttc aggtttgcgt tgggcggcaa
     3721 gaaggtcagc cagcagcgtt tgtgcggcga tgtggccggc ttgtgcggct ggttcgagat
     3781 agtgttcggc ttgtgcgtgg ttggggctga cacctgtacc gtagaagtag atttgaccaa
     3841 gttgccagca ggcggcagtt acgccgagtg ctgccgcttt ttcgtattgt tcgatggctg
     3901 tttcaacgtc gccttggcgt tgatgatggc gtgccagatg gtaatacgca ggtgcggcat
     3961 atcgggcggc agcaagttcc gcccagtaga gcgattgtgg atcgttgcgt tgcgcgtggt
     4021 aacgcatgag gattaattgg gcttctgagt gcccctgctc acccagccag gcatagtcgt
     4081 tgagaagctg tccggtcggg gtgccgttgt gttcgcgttg ttgcagcagg gagaagagtg
     4141 ctttgggatg gcgttgggcc gcggcggctt ccaaccatgg aagtgcctgc tccggatgac
     4201 cgtttttcag cagatggttg cccaatacaa aagcagcttc cgtatatccc tgctctgcgg
     4261 cctgttgcag caggggcagg gcttgggcgg tattggattg ttccaaaagg gcggcggctt
     4321 gccggtagag gatatcagga gcggcggtca tggtttgcgg gcggatataa agtggaagac
     4381 ggatgctgcg gcatatgggc ggcgataccg gttgagggct ttgtaaaaat tttgctcggc
     4441 acagttttat agagtgtatt gccttgccgg cttatcttta ggatgtttgg cttgttatat
     4501 tgttttgcct agggatatat ccatattttg tgtgttacaa agggctcagg ttgagtcggt
     4561 atgcgctcat ggcagctcgg tcattatact gtttttgtaa tttattgtta atgataaatg
     4621 cagatttttg tgttttattt acatggcagt agctaaggta ttgattgttt caggccgtct
     4681 gaaatgtttt cagacggcct gaacttcctt cgctaagtca gattactggt gtggaagagt
     4741 tggaggtttt tttgttgggg aaaaacacct gactgtagaa gttgccgtta atttgggtca
     4801 cgttgaggtg gtacattcgg taggcatgga acagctcttt gtcaggcggt gtcggatgat
     4861 tccaaaattc tgccaaggta ttttggtcag taatgccggg aatatcataa taggcacggc
     4921 cgagaacctt aactggcata ttgtgaatca gtccggacag gccgctggtg ctgttgatgg
     4981 tgaccatgcc gagaccgtgg cgcaggaaaa cgggcagggg gacatcatgg acataaatca
     5041 cgcggccttt gagttcgggg tgttctttga taaagcgttt aatgtcgcgc cagtagtcga
     5101 taaaaccgcg gtccatcgga tgatgcttga tgatgatgtt ggtatcggca ggcgcgtgct
     5161 cggcaaatga actcaaaaca tggagcagga agctgcggac gctgggaaag tcgcaatgga
     5221 tacggacttg gctgtcgttg aatacctgta agggaacaat aaaaaacttg ccgtatttgc
     5281 ctgcttccac acgtttggcg atttggatgt cttcaatata gtagttcaaa cgcttgagga
     5341 tggagagcga ccacggtttg aggtaatggc cggcattggg tgcgcggtgg tggatgtagt
     5401 cggggtattt gcgtggattg cggaacaact cgatatagta acggatagcg ttttttgcca
     5461 tgggcgtaaa accgccgtgt accggcgttg gcgctttata ttcttgctgg gcaagcttag
     5521 ggaattgttc aaaaaaaaag tcggcacggc gcggcaacgg ggaaaatgcg ttgacgccgt
     5581 ctttttctaa ggtgatgtag taggggcgga aatagccttc ttcaaacgcc cagaaactgg
     5641 cttggttttc gtttgcaatg cgttttgcaa tgacgtgata agggcgtgtg tcgccaaagc
     5701 agacaacggc ctggatgtga tgttgagtga tgtattcttg caaaaactca ggaaaggcat
     5761 cgtagttgtc gttaaaaaca acggtatgcg cttgagtggg cggataaaaa tagtcgtcgc
     5821 ctgcattaaa gttgaattta tgtacggttt tgccgtttgc agtcagccag tcggcaaggc
     5881 gcagaaaaaa atcgccgaca gggccttgaa gcagcaggat attttctgcg ctttcaagca
     5941 ggttttgcag gttatttttg aggacggtct gtttcatgtt gcaatgtggt tttgtttttt
     6001 atgtaatagt tttaggttga actttcaagc atacgccaag agaattaacg atgcaaaggc
     6061 aatgatgccg caatagaggc aagtttatga cgcatcgtta actttgatgg tatttatttg
     6121 aaagatcgat atagttgttt gattttacct aattttttgg caaagtaccc gcgatgtaat
     6181 ccgttgttgt ttttttgcat atttttttgt cgtatcagga tttgggcagc ggtttccgca
     6241 ttgatggcct gatgggtttc gggatggata tagtcgggat agtgtatgag cgtgccggca
     6301 atcagctgcc aaagctcaag tctgcggcta cggcgcggaa tggggagcag atcttgggta
     6361 agtccccagc ctgcgtaaaa aggcaggccg tagcagctga cttttttgcc gcgcaacaag
     6421 gcttcaaaac cggtcagcga agtcatggta tgtacttcgt ctgcgtattg gagacaggtc
     6481 aggatgtcgg tttgctcggc ggtttggtcg gcatatcgtg cagcatcttc aggggaaata
     6541 tggccgatgc ggttaccgct gactacatcg ggatgcggtt tgtagatgat ataggcattg
     6601 gggtttcgtt cgcgtacggt acggagcaaa tccagattgc ggtagatttg gggcgaaccg
     6661 tagcggatag acgcatcatc ttcaacctgg ccgggaacga ggatcacggt tttgtcggtt
     6721 gacggggcgg tgaagtctga gctgccgacg ttgtatttac tgatgtggtt ttcggtcagc
     6781 attttttgca gcttcaaggc cgtctgaaag tcttgatcgt cgaagttttg gttttgtagg
     6841 atgtattcaa gacgggacgg ggtttcggca ttgaaataaa tgctcatatc gtcggtaacg
     6901 agcgacagcg gcggcactaa gttggagccg agtccgaccg agcggataaa gccgtcttcc
     6961 atgcgcagca gggggatgtg gtgttgttcg gcaaagcgga cgatggcctc tttgccgttg
     7021 ccccaagcca ggatgcgtgc atcgtcggac agtttgaccc ttgccagttt ttgggtggaa
     7081 gagataaatt tcagacggca agagggtacg ttaaagaacg gtttggcaac cgcgcgtttc
     7141 cacaaagaca taccgacgca atataactcg ccacgcaatt tgtcgttttt acgtttgacc
     7201 gtcgccagat agtcgatgac atcaaagagg ctgcctgctt cgccggtatt ggggttgagg
     7261 tagcggctgt attgcagata ggctgcggcg aagagctgca gcaagttgcg ggtggcgcgg
     7321 cgttgggttt gaacaaggcg gttgatttca ggatggcggt cgtcgctcac gccccatccg
     7381 gcataccacg gcaggccgaa ggtggtcagc ggcttgccgc acaaaagtgc ctcaaaaccc
     7441 atttgcgagg taacgcaata aactttatcg acgttttgca acaaagaaat cgggttgatg
     7501 tcttctgcca gaagatggac gcggtgttgc tgcgccagtt gggtcagata gccttgtttt
     7561 ttgccgcaca aaacatcggg atgggttttt acccagatat cggcttgcgg gttttcattc
     7621 aaggccgtct gaaacatcag ttcaaacgta gaggcgtctg cgccgccata ttggatggcc
     7681 atatcgccga aggtttggtc gataatgagg acagtttcag gcttggatgg ggagcgtaaa
     7741 ggatgatcgt ctgaaagttc gggcgcgtgg ttgtatttgg acaggtggtg ttgcaggatg
     7801 aaatccatcg tctgttgcgc ctgagccaag gtttcagacg gcatggtatc ggcggcaaga
     7861 atcagttgtt ccaaacgaga agggcgggta gtgtcgtagt agatgccgat gtcgtcatag
     7921 acgatggagt aggggggata accggagacg cccagtccga gcgagcgtaa aaagccgtct
     7981 tccaaagcaa taaagggaag ctggtgttcg gtggcaaaag cacgcgcttt gtgtgtcgtc
     8041 gggcgcaaac cccagccgac aacagcctct gctccttttc cgtctttgta gatatgaaac
     8101 tcgggcaata gggtggagag atgggggatt ttgcggatgc cgcgagaggg gatgtaggcg
     8161 tttttcacaa tgcgttttcg tcgattattg ttattaatag attgtaggcc gtctgaaaag
     8221 aggaacattc tttcagacgg cctgaatagt cttaaaacgt gaccgcttca gccaatactt
     8281 tgccggccaa gtctttaggc gacaggttcg gctcgccttg tagcggccag
//
LOCUS       DAXHRP010000087         8312 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.087, whole genome shotgun sequence.
ACCESSION   DAXHRP010000087 DAXHRP010000000
VERSION     DAXHRP010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8312
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.087"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(348..527)
                     /locus_tag="ACFM72_001379"
     CDS             complement(348..527)
                     /locus_tag="ACFM72_001379"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257936.1"
                     /translation="MRHFFIRQHRRRIIKRRAHPPGVRQLHRIAHCLRRPVLCGEPFY
                     GFLFESNPLRLIEAV"
     gene            complement(488..1012)
                     /locus_tag="ACFM72_001380"
     CDS             complement(488..1012)
                     /locus_tag="ACFM72_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HFC6257937.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQILSA
                     PYGFGCSGGNASPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHWVVADIPADVHRRN
                     ATSLQLSRCANIADDPSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSATSA
                     ALCGTSSSVSTAAA"
     gene            1323..2075
                     /locus_tag="ACFM72_001381"
     CDS             1323..2075
                     /locus_tag="ACFM72_001381"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HFC6257938.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETRVCECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHMEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDVLLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVLIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            2266..2341
                     /locus_tag="ACFM72_001382"
     tRNA            2266..2341
                     /locus_tag="ACFM72_001382"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2299..2301,aa:Asn,seq:gtt)
     gene            2472..3482
                     /gene="waaF"
                     /locus_tag="ACFM72_001383"
     CDS             2472..3482
                     /gene="waaF"
                     /locus_tag="ACFM72_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HFC6257939.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENSFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAIIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHQSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINRLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            3537..3983
                     /gene="smpB"
                     /locus_tag="ACFM72_001384"
     CDS             3537..3983
                     /gene="smpB"
                     /locus_tag="ACFM72_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HFC6257940.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            4447..6363
                     /locus_tag="ACFM72_001385"
     CDS             4447..6363
                     /locus_tag="ACFM72_001385"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC6257941.1"
                     /translation="MAVDYVYDKTKLTDDEITRLKKLRDRNSEYWKEETYHIKSNNRV
                     YPNIPALFPKHPFDPFENINNSKRISFYDKEYTEDYLVGFAQGLGVAKRNGETEKPIR
                     QYFKECLNTGKYSDDTCKSQQSIPTVRSDIFALNTKIKNSHINSEIFAVGNYTKLMYS
                     AQHHSIWSEHLYSNSELSLDVDNSHVIGQTIDLGALELTNSLWEPRWNSNIDYLITKN
                     AEIRFNTKSESLLVKEDYAGGARFRFAYGLKDKVPETPVLTFEKNITGTSDIIFENPI
                     DDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDIAIY
                     AQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLRVIDGHSSQWVQGKTAPVEGYRKG
                     VQLGGEVFTRQNESNQFSVGLMGGQAEQRSTFRNPDTDNLTTGNMKGFGTGFYATWHQ
                     LQDKQTGAYIDSWVQYQRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTKKGN
                     RVRFYLQPQAQLTYLGVNGKFSDSENAHVNLLGSRQLQSRVGVQAKAQFSLYKNIAIE
                     PFAAVNALYHNKPFGVEMDGERRVINNKTAIESQLGVAVKIKSHLTLQATFNRQTGKH
                     HQTKQGALNLQWTF"
     gene            complement(6544..7911)
                     /locus_tag="ACFM72_001386"
     CDS             complement(6544..7911)
                     /locus_tag="ACFM72_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFC6257942.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGERVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWTLRENISASQRKLGTSIKHD
                     IAVPIGHVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPDILSNEAYRYED
                     DINSTVYRNVLACNGTVAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(8021..>8312)
                     /locus_tag="ACFM72_001387"
     CDS             complement(8021..>8312)
                     /locus_tag="ACFM72_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257943.1"
                     /translation="AALLSLVLAACGGEKAAEAPATEAPAAEAPATEAPAAEAPAAEA
                     AATEAPAAEAAATEAPAAEAPAAEAAATEAPAAEAAASEAPAAEAPAAEAAK"
BASE COUNT         2144 a         1828 c         2224 g         2116 t
ORIGIN      
        1 acgccgacgg aatatggttg aaacccggcc cttctgggcg atgggatttt ggtttatttt
       61 ttgggaagta accccttcca aatcagggta aacagggctg tgccttatgt gcggccctgt
      121 gtgttgaaac attgaggaat ataaccgtgc cgtcaaatta ctttatatac gcgcggacga
      181 ttgggtgctt tgggcggcat cgtgcaacat cataccgcct tgtaccgcag cgtggcggta
      241 tatgaaccgg ctgtgcttat cgtgcggcgc ggaagtaaga agctgcggcg ggtgaggcgg
      301 tcgcgttggc aggcggacag acgtttgacg ttattaatat tcccgatcta gacggcctct
      361 atcaggcgca atggattgct ttcgaacagg aaaccgtaga aaggttcgcc gcacaatacg
      421 ggacggcgca ggcagtgtgc gatgcggtga agctgccgca ccccgggcgg atgggcgcgg
      481 cgtttgatta tgcggcggcg gtgctgacgg atgaagaagt gccgcacaat gcggcggagg
      541 tcgcgctttg cggcgtgttg gcgtggttgc agcatgacgg catcggtttt gccgtgtacg
      601 aaggcgtcaa cctgatgcgg caaatccgca aactgattac cgccgatatg gctgcggacg
      661 ggtcgtcggc gatgttggcg cagcggctta attgcagcga ggtcgcgttg cggcggtgga
      721 catcggcggg aatgtcggcg accacccagt gcatccagcc cagtccggtc ggcgcgtctt
      781 tatcgtaaac ggtcaggacg aaactttttg tcccggcggg cggatttttc cacgacagcg
      841 cgggcgaagc attgccgccc gaacagccaa agccgtaagg cgcgctcaaa atctggtttt
      901 gcgtgaagcc gccgtcttcg gacgggttgt cgaattgcag cgtgaatgcg cccccggcaa
      961 aggcagcggt tgaaaaagcc agcagtacgg cggagaggat gcgggtttgc atagatgatt
     1021 cctttgcttg atgaataagt ggattcatta taggctgtca acggcggcag gaatgtgccg
     1081 aaacggttgg atgatgtgcc agaatgcgca aatgcaaaaa tcgtggtttc agacgagcct
     1141 ttgcaggtcg tctgaagtct ttaattcctt tccctgaggc tttagaaata tcgaatattt
     1201 aggtattgcc gcaacctaac cctcaagatt tacgtcatag cccgttcctg ctccggcgtg
     1261 cgggaatggc aaaaattggg gattttgccg ccaaatccat gatagagata cggagcaaac
     1321 gaatgattac cctgccttcc ttaaacaatc tgccgtcaaa atgggatgaa atccgctatt
     1381 ggctcgaaac ccgggtttgt gagtgcggcg ttatgccgca tcccaatttg acggaatgcg
     1441 aagccgggca gttcgatcgg gatttttggg acaatatcgg ctgcgcgcct gaagaatatg
     1501 tccgtatccg ccgagccatc cgtctgttgg aagcgcgtta tcccgacagt ttgaatgagc
     1561 tggtgtgtgc cgccattgcc acgcctttgg gcgagatgtt ggcggtgttt ggaaataagg
     1621 gattgtgtct gctggagttt gtcggacaga aacatatgga gcaggaaatt gccgccgtcc
     1681 aaaaagcctt gcgcggacgg tttgtgtttc gggaggatga gcggacgcaa cttttgcggc
     1741 aggaattgga cttatacttc aagggtcgtc tgaaaacctt tgccacgcct ttggagcaga
     1801 ttggcaccga gtttcaaaag caggcatggg acgtgctctt ggcgattcct tacggcgaaa
     1861 cgcgcagcta caaagagcag gcgcagcgtt tgggcaaccc caaagccgtc cgcgccgttg
     1921 ccgccgccaa cgggcagaac aaggtgtctg tcctgattcc ctgccaccgc gtcattggca
     1981 gcgacggcaa actgaccggc tacgcaggcg gtttgaaccg caaacagttt ttactggctt
     2041 tggaacgcgg cgaagttcag acggcattgt tttaagcggg ggagggcaga acggctcatc
     2101 gggcttaaat atggtgtgat gacggctgtg gaaattcata caacggcaat ccttttaagg
     2161 catcggtctt aatgtctttc tgattcatat gcttgtcgtt ttgtcgccca tttttccaaa
     2221 attaaggatt gacacatttt ttccggacgc tataatacgc cccattcccc gatagctcag
     2281 tcggtagagc gacggactgt taatccgcag gtccctggtt cgagcccagg tcggggagcc
     2341 agaattttga agcccgaact tgaatgttcg ggctttttca tatttgcacg tccggcgttc
     2401 ggaatgcggc aagataggtt ttccaacggt ttcgcggtaa aattccgcct gtctgatttc
     2461 ggtttcttgt tatgtccatc aaaatcctga ttatttctcc cagttggata ggcgactgcg
     2521 tgatgaccca gcccttgttc cgccgtttga aggaacttca ccccggttgc acgattgatg
     2581 tgttcgcacc gaagtggtcg atggcggtgt tcgagcgtat gccggaagtg aatgaaattc
     2641 ttgagaattc gttcggacat ggtgcgttgg agttgaaacg ccgttggcgg gtcggtaggg
     2701 atttggggcg gcgcggatac gatcaggtta tcgtgttgcc cggttctttg aaatcggcaa
     2761 tcatcgcgct ggcgacaggt atcggtaaaa ggacgggtta tgtcggtgaa agccgttatt
     2821 ttctgttgaa cgatatacgc aggctggata aggaacgtct gcctttgatg gtggatcgat
     2881 atacggctct cgcgcatcag agtcaggaag attttgacgg gcattcggga ttccccgagt
     2941 tttccattga tgaacggcgg cgggaaattt ctgtcgaaac tttcggtttg aatcttggaa
     3001 agcctgttct ggctttttgt ccgggtgcgg aattcgggcc ggcaaagcgt tggccgacaa
     3061 ggcattttgc cgagttgggc aaacattatc tggcggcggg ttggcaggtt tggctgttcg
     3121 gttcgcaaaa agatgatgaa attgccgagg aaatcaaccg cctttcagac ggtatgtgtg
     3181 tcaatttgtg cggcaaaacc gatttgtcgc aggcaatgga tttgctgtcg ttggcggaca
     3241 cggtcgtgtg caacgacagc gggctgatgc acttggcggc ggcattgggc aggaaagtgg
     3301 tggcggttta cggttcttcc agcccgacgc atacgccgcc tttgagcgac agggcgaaaa
     3361 tcgtcagcct gcacttggaa tgttcgccct gttttaagcg ggaatgtccg ctggggcata
     3421 ccgactgcct caacaggctg tatcccgaga agattgtgca ggcggttgaa gaggcggtat
     3481 gatgggttct gttttcgggt ttatgccgtc tgacggcgga tattgatagg atgtttatgg
     3541 ctattgcgaa caataaaaaa gcatttcacg attttttcat tgaagaccgg attgaagccg
     3601 gtttggtctt ggaaggctgg gaagtcaaag caatccgcgc cgcgcgcgta cagcttaaag
     3661 agagttatat ctattggaaa aaagacgcgt tttatctggt cggctgccat attacggctt
     3721 tgcccacagc ctcgacacac attaaaccag atgccgtacg tccgcgcaag ctcttgttga
     3781 accagtcgga aatcaacaaa ttaatcggca aaaccgaacg tgccggctac accatcgtgc
     3841 cgctggattt gcatttttcg cgcggaaaaa tcaagatgga aatcggtttg gcaaaaggta
     3901 agaaacagca cgacaaacgc cagagtatga aagaggcgga ttggaaacgc gagaaacagc
     3961 ggttgattaa gcatacgcgc tgattgtgga aacagtgctt cagacggtat gggcaaggct
     4021 gccgcctgat gtgtaaacgt tctacaccta aaccagcatc cgctttaatc agcacggcat
     4081 gatgccccaa accttcgtca aaggtttgag caatttgatg ataaattggc attagccaag
     4141 ggtaaagtgc ggtcattttt cctgaaattt ttgtaaataa cgagggcaat tatacacatt
     4201 ttcaaactgg cttgacaaaa tagcaaaaag caaacgttta cttttaataa ataagaaata
     4261 aatagagaaa atttgaacta aatgacattt tttgttcagt tttatgctaa aatccacgcc
     4321 ccatttattt ttacttgaca aaggaaaatt tattatgaaa ctcgaagcaa gcaagcaagc
     4381 aagcaaaagt ttaaaaaatc atttattgta agtctatttt tttctattct ttatacctct
     4441 ccgcttttgg ctgttgatta cgtttacgac aaaaccaagc tcactgatga tgaaattacc
     4501 cgcttaaaaa aactccgcga tagaaatagt gaatattgga aagaagaaac ttatcacata
     4561 aaaagtaaca accgagttta tccaaacatt cccgcattat tccctaaaca tcctttcgat
     4621 ccattcgaaa acatcaataa ttcaaaaagg atttcttttt atgacaaaga atacactgaa
     4681 gattaccttg ttggttttgc tcaaggttta ggcgttgcaa aaagaaatgg ggaaacagaa
     4741 aaaccaatac ggcaatattt taaggaatgt ttaaacactg ggaaatatag tgatgatact
     4801 tgcaaatctc aacaatctat tcctacagta agaagtgata ttttcgccct aaatacgaaa
     4861 ataaaaaata gccatatcaa cagcgaaatt ttcgctgtcg gtaattatac aaaattgatg
     4921 tactcagccc aacatcattc tatttggtca gagcatctct attccaattc agaattatct
     4981 cttgacgttg ataactcaca cgttatcgga caaacgattg atttgggagc attagaatta
     5041 acaaattctc tatgggaacc ccgttggaac tctaatattg attatttaat aacaaaaaat
     5101 gctgaaattc gttttaacac taaaagtgaa agtttactcg taaaagaaga ttatgctggc
     5161 ggagctcgtt ttcgttttgc ttacggtcta aaagataaag tccctgaaac accagtttta
     5221 acttttgaaa aaaatataac tggcacttcc gacatcatct tcgaaaatcc aatagacgat
     5281 ttaaaaagcc tcgatgggca tcaaattatc aaagtaaatg gcacagcaga taaacacgca
     5341 ttccgtcttt ctggcaaaca ccaaaaggga atttatacgc tttctttaca acaacgccca
     5401 gagggctttt ttaccaaagt gcaagaacgc gatgatattg cgatttatgc acaacaagcc
     5461 caagccgcca ataccttatt cgccttgcgt ttaaacgaca aaaacagcga tatttttgac
     5521 cgcactttac cgcgcaaagg cttgtggtta cgtgtgattg acggacattc cagccaatgg
     5581 gtacaaggca aaacggcacc tgtagaaggc tatcgaaaag gtgtgcaact cggcggcgaa
     5641 gtattcacgc ggcaaaacga aagtaatcaa ttttccgttg gcttaatggg tggacaagca
     5701 gaacaacgca gcactttccg caatccagat acagataatc ttacaacggg aaatatgaaa
     5761 ggctttggta ctggttttta cgccacttgg catcagcttc aagataaaca aacaggggca
     5821 tatattgaca gctgggtaca atatcaacgt ttccgccacc gtattaacac tgaagatgct
     5881 acagaacgtt ttacttcaaa aggtattact gcctcaattg aagcaggtta caatgcttta
     5941 ttggcggaac acttcactaa aaagggcaac cgtgttcgtt tttacctgca accacaggca
     6001 caattgactt atttgggggt aaacggaaaa ttcagcgata gcgaaaatgc ccacgtgaat
     6061 ttacttggct ctcgccaatt acaaagccga gtgggcgttc aagctaaagc tcaattttca
     6121 ctctataaaa atatcgctat tgaacctttc gccgctgtga acgcgcttta ccacaacaaa
     6181 cctttcggtg tggaaatgga cggagagcgt cgagtgataa acaataagac ggcaattgag
     6241 agccaattag gtgtagcagt gaaaatcaaa tctcacttaa ccttacaagc cacattcaac
     6301 cgccaaacag gcaaacatca tcaaactaaa caaggtgcgt tgaatttgca gtggacgttt
     6361 taagttaagt tgtaacaaaa taaaatcggc agggaaattc actgccgatt tttttatttt
     6421 aaaaatgcgg tcatttttcg tgtcatttcc accaattttt taccgcactc acgagctcgc
     6481 gctaaaccga caatcggatc tattgtccct ttctttgttg tgtatgcaaa tcagaaatgc
     6541 cggttacgga agcagtttgc ccggattcat aatgttatat ggatcaaggt gttgtttgat
     6601 gcttttcatc agggcgattt cggcaggcgt gcgtactttg tccagccact gttttttgat
     6661 gatgcctatg ccgtgttcgg cggcaactgt accgttgcag gcaagaacgt tgcgatagac
     6721 tgtgctgttg atgtcatctt cgtaacgata tgcctcgtta ctgagtatat ccggcagaaa
     6781 agtattgtag tgtaggctgc cgtcgcccag atgtccgaag cagacgattt gtatgccttt
     6841 gaaattctgt tccaaatctt tggcacaccg gcggacaaag tcggcaacgt gcccgatggg
     6901 gacggcaata tcgtgtttga tgctggtgcc cagtttgcgt tgcgatgcgg agatgttttc
     6961 acgcagtgtc cacatatgga tacgttcttg ttcgctttgt gccaatacgc tgtcggtaaa
     7021 tcctttttta taaagaaatt cgacaagccg atcatcaaga ttgctgtcgg gtaatgagtc
     7081 ggtcaactca agtaaaatat gccattctga atgtgtcggc agggggaatt tgctgaattc
     7141 ggaagacaac tcggcggcaa aacggccgat cagctcaaaa ctgcataggc gttcggcaaa
     7201 gtgagcttgg gtttcggtca gcaggcggac ggcggattcg atgtcgggta tgccgaccca
     7261 tgccgttgcc ttgtccgagg gacgggcaaa aagcttgagt gtggcggcag tgatgatgcc
     7321 cagtgtgcct tcgctgccga taaacagatg gcgcaggtcg tagccggtgg tgtttttatg
     7381 caggggatgg agatgggaaa cccgttcgcc gttggggagg acgacttcca aaccgataac
     7441 caggtcgcgc atcgtgccgt aacgcaatac gttcaaacct ccggcattgc aggcgatgtt
     7501 gccgccgatt tggcacgagc cttcgctggc gagactgagt ggaaacagcc tgtttgaggc
     7561 ttcggctgcc tgttggacgg tttggagtac ggaacctgct tcgacggtta tgcagttgtc
     7621 tgacaaattg atgctgcgga tgcggttgag tttggaaagg ttcagcaata cgccgttttc
     7681 cgatactgcc gcgccgcaca aaccggtatt gccgccttgc ggcgtaaccg gaatacggtg
     7741 ttcgtaacaa aaacgcataa tggtttgcac gctttcaacg ctgcgcggct gcaaaatgat
     7801 gtctggtgca gacgtaaagc ggttgcgctg gtcttttaaa agcgtcggag aaagttcggc
     7861 aatttcatct gccggcagga gtcgggaaaa ttcggtatga aggtcaggca tgtttgtcgg
     7921 aagggtaggg agaagattga ggaagggaat ctgatgccgt ctgaaaaatc aaaaaagcag
     7981 gatactgaac gtatcctgct tttttgcaag cggaaaatgc ttattttgca gcttcggcag
     8041 caggagcttc agcggcagga gcctcagaag cggcagcttc agcggcaggt gcttcggtag
     8101 cggcagcttc agcagcggga gcttcggcgg caggtgcttc agtagcggca gcttcagcgg
     8161 caggtgcttc ggtagcggca gcttcagcag cgggagcttc ggcggcaggt gcttcagtag
     8221 cgggagcttc ggcggcaggt gcttcggtag cgggagcttc agcggctttt tcaccgccgc
     8281 aggctgccag gaccaaagac aacaaagcag cg
//
LOCUS       DAXHRP010000088         8255 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.088, whole genome shotgun sequence.
ACCESSION   DAXHRP010000088 DAXHRP010000000
VERSION     DAXHRP010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.088"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(208..1593)
                     /gene="pntB"
                     /locus_tag="ACFM72_001388"
     CDS             complement(208..1593)
                     /gene="pntB"
                     /locus_tag="ACFM72_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HFC6257944.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1659..2042)
                     /locus_tag="ACFM72_001389"
     CDS             complement(1659..2042)
                     /locus_tag="ACFM72_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HFC6257945.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKTGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(2046..3587)
                     /locus_tag="ACFM72_001390"
     CDS             complement(2046..3587)
                     /locus_tag="ACFM72_001390"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HFC6257946.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWVCPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTHDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVSLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFFVTRRMLN
                     MFRKG"
     gene            3877..4710
                     /gene="serB"
                     /locus_tag="ACFM72_001391"
     CDS             3877..4710
                     /gene="serB"
                     /locus_tag="ACFM72_001391"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HFC6257947.1"
                     /translation="MPHALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SGADAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            4774..5997
                     /locus_tag="ACFM72_001392"
     CDS             4774..5997
                     /locus_tag="ACFM72_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFC6257948.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGADGAY
                     ISFREGVARASEGRRLGVLILCGMLAGGGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLTV
                     NTSLLWFSAVIGPILGVAAVFFQRTAQKFPFIKRDNIKIIPLAVCMFALIGVISVWFP
                     EILGNGKAGNQLTFGGLTDWQHSLGLTAVKWLVVLMALAVGAYGGLITPSMMLGSTIA
                     FAAATAWNSVFPEMSSESAAIVGAAVFLGVSLKMPLTAIAFILELTYAPVALLMPLCT
                     GMAGAVWVAKKMGFK"
     gene            6161..7741
                     /gene="purH"
                     /locus_tag="ACFM72_001393"
     CDS             6161..7741
                     /gene="purH"
                     /locus_tag="ACFM72_001393"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HFC6257949.1"
                     /translation="MSSIKRALISLSDKTGAVEFAQTLHKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGTPEIAGFPGRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DVPACVIVKHANPCGVAIASNTLDAYKLAYATDTTSAFGGIIAFNREVDGATVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDIHR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
BASE COUNT         1846 a         2235 c         2312 g         1862 t
ORIGIN      
        1 taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt tgtgtcagtt
       61 tcagatgtag gtgcttattc ggacgggccg tctgaaaatg tttgccccaa tgcaaaaaaa
      121 atcactgcaa accttcataa acggggtttg cagtgatttt ttcaaatcaa acagattgaa
      181 aacctgcgcc gaattgttca gacggcatta ttttttcagt tcggacagaa tgtcatctac
      241 ggttttcttc gcatctccga aacacatcac gctgttttcg ttgaagaaca gtgggttttg
      301 tacacctgcg tagccggtat tcatcgagcg tttgaagacg acgacttctt ttgccttcca
      361 cacttccaac acgggcatac ccgcaatcgg gctgttcggg tcggtttggg cggcggggtt
      421 gacggtgtcg ttcgcaccga tgaccaagac cacatcggtt tcggggaagt cgtcgttgat
      481 ttcgtccatt tccaaaacga tgtcgtaggg gactttggct tcggcgagca gtacgttcat
      541 atgaccgggc aggcggccgg cgacggggtg gatgccgaag cgtacttcgg tgccgttttt
      601 acgtaaaagc tcggtgattt cggcaacggg gtattgcgct tgtgcgactg ccataccgta
      661 gcccggggta atgatgacat tgtttgcgcc tttcagcatt tcggcaatat cggcagcttt
      721 gacttctcgg tattccccta tctcttggct gccggaagat aatgtgccgc tgtcgctgcc
      781 gaaaccaccg gcaattaccg agacaaacga gcggttcatg gctttgcaca taatgtagga
      841 cagaatcgcg ccgcttgagc cgaccagcgc gccggtaacg atgagcaggt cgttggagag
      901 catgaagcct gccgctgcgg ccgcccagcc ggagtaggag ttgagcatgg acacgaccac
      961 gggcatatct gcgccgccga tggaggcaac caagtgccag ccgaatgcga gggcaatcag
     1021 ggtcataatc agcaggatga agccgctgcc gtcaatgccg acaaatacga gcagcaacac
     1081 aaacgatacg gcaagtgcca gtgcgttgag cttgtgtttg gcgggcagtt gcagcgggct
     1141 gctgctgatt ttgccgttga gtttgccgaa tgcgaccagc gagccggtaa aggttaccgc
     1201 gccgatgaag atgcctaaat acacttcgac cagatggatg gtgtgcatat cgtgcgaaac
     1261 gttgcccggc gcgatatagc tgttgaagcc gaccaaaacc gccgctaggc cgacgaagct
     1321 gtgcagcagg gcaatcagtt cgggcatttc ggtcatttcc acctttttgg ctttgtagat
     1381 gccgattgcc gcgccgatga gcatggcgat gatgatccag cccagtccgt gggtattgtc
     1441 ggaaaaaaca gttacaaaaa gggcgaccgc cataccggcg ataccggaat agcagccctg
     1501 tttggcggtt tcctgtttgg acagccccgc cagtgagaag atgaataaaa ttgcggcaac
     1561 gatatacgcc gctgttacga gtcctgaaga catggaaatt ctccgatttt cgatgatttg
     1621 tttttaatgc cgtctgaact gttcagacgg catctgtttc aagcagccgc gacaaacagc
     1681 ccgacggtgc aggcaaatcc gcccgcccac atcagcgagc gcaatgctgc tttgtctgcg
     1741 atgtagcacc agataaaggc gaggcggaac aggatgaaca ggccggcaag cgtgttgacg
     1801 gttgcttgtc cggcattgcc ggttgcgtgt gccgtcaaaa cggcggcggc aaacggtgca
     1861 aaggcttcaa aaccgttttg ctgcgcggcg tgggcacggg cggctgtgcc ttgcgtgcgc
     1921 gccagaaaat cgcgcggatt gtggttgtct ttaaaccgga atccgcccgt ttttttggca
     1981 tatgccgcac aaaaaagcgg caataagcag gcaatcagga tgcaccaata ggcaaaagtc
     2041 atgctttatc ctttcctaaa catattcaac atgcggcgcg ttacgaagaa gccgccgaag
     2101 atattgatgc tggcaatcag gatggcgatg aaggcaagca gggtaacgaa accgttgcct
     2161 tggctgattt gcagcagcgc gccgacgacg atgatgccgg agatggcgtt ggttaccgac
     2221 atcagcggtg tgtgcagcga gtggctgacg ttccaaacga catagtagcc gatgacgcag
     2281 gcaaggacga acacgataaa gtggttcagg aatgctgcgg gtgcgaccgc gccgacccac
     2341 agcaccaata cggcggcgat gacggcgggc gcgagttttt tccacaggga aacaggtttc
     2401 ggctcgggct tggcggcagg cgcggctttt tcagacggcg tttgctgcgg ctgggcggaa
     2461 acttgaatcg gcggaggcgg gaaggtgatt tcgccgtcgt gggtaacggt catgttgcgg
     2521 atgatcacgt cttcgaagtc caacgtgatt tcgccgtctt tgttcgggct taacagcttg
     2581 gtcaggttga ccaagttggt ggcgtaaagc tgggaagact gtccggcaag gcggtttgcc
     2641 atgtcggtgt agccgatgat tttcacgccg ttgccggtta cggacaattc gcccgggcgg
     2701 gtgagttcgc agttgccgcc cgtcgccgcc gccaaatcga cgatgacgga gccggatttc
     2761 atgctttcca ccatttcttt ggtaatcagc ttgggcgcgg gtttgcccgg aatggcggcg
     2821 gtggtgatga tgatgtccac ttctttcgcc tgctcggcaa agagcttcat ctcggctgcg
     2881 ataaattcgt cgctcatcac tttggcgtag ccgtctccgc tgccgcccga ttcttgtggg
     2941 aagtcgagtt tcaggaactt gccgcccatc gattcgattt gttccgccac ttccaagcgg
     3001 gtatcgaacg cgcgtaccac tgcgccgagc gagtttgccg taccgatcgc cgccaaacct
     3061 gccacacctg caccaatcac caaaacctgc gcgggcggca ctttgccggc ggcggtaatt
     3121 tgaccggtga agaaacggcc gaaggcgttg gcggcttcaa ttacggcgcg gtagccgctg
     3181 atgtttgcca tcgaagacaa agcgtccaaa gcctgcgcgc gcgaaatgcg gggcaccata
     3241 tccatcgcca gcgcgttcac tttcttggcg cgcaaggctt cgaccaaagc ctcgttttgg
     3301 cgcggccaca ggaagctgac gatggtttga ccttcgttca aaagcggcag ttcctgttcg
     3361 gacggcgcgt tgaccttata aatcaaaggg cagacccaaa ccgccgcttt gtcggcaacg
     3421 gttgcgcctg ctgtttggta agcggcatcg tccaaacttg ccgccaaacc tgcaccgctt
     3481 tcgacaacgg tttcaaagcc cagtttgccc agcagggcga cggtggcggg cgtgcaggcg
     3541 acgcgggttt cgccggataa tgactcgcgt gggataccga ttttcatctc tgaatccttt
     3601 ttcgggtagt ttatatgtat cgtgggttaa atttaaatcg gggcagggcg gagcaacgcc
     3661 gtaccggttt aaaaccgatt cacttcaaat gttaatatat tttagataat ccccttataa
     3721 cgaattttca tcaggctggc aatagttgcg gcattttccc gtgttgtccg acacatactg
     3781 ccgtttgcgt ttgaagtcat tttccgattg cagtccctcc cgccgtaaca ttctttgccg
     3841 tttcactata taatccgcat tttttgagcc gccgttatgc cgcacgccct cgtcctccaa
     3901 tttccctccg ccgaagccct gccttccgac ttcccctccc gcctgcccga acctgattgc
     3961 gccgatgaaa agcgtatgcg ttttatcgtt gaagaagggt tttctttaag cggggcggac
     4021 gcggcgttgc ttggcagccg tcaaatcgac cacgccgtgt tgccggatat ggattttggc
     4081 gaactcggtt tgattgtcag cgatatggat tcgacgctga ttaccatcga atgcgtcgat
     4141 gaaattgcgg caggcgtggg tttaaaagac aaggtagcgg aaattaccga gcgttcgatg
     4201 cgcggagagt tggatttcga gcagtcgttg cgcagccgcg ttgcgctgtt ggcgggattg
     4261 gacgaacaga ttttggcgga cgtttatgaa aacgttttga agctctcgcc cggtgcggaa
     4321 tttttgttgg acgaatgcaa aaggcacgat gtgaaattcc tgctggtgtc cggcgggttc
     4381 acgtttttta ccgaacgtct gcaacaacgc ctcggcttcg aataccaaca cgccaatgtt
     4441 ttggaaattg aaaacggcag gttgaccggc cgtctgaaag gcagaatcat cgacgcgcag
     4501 gcaaaggcgg atttattgcg cgaataccgc agccgcctcg gattgcagcc acatcaggtg
     4561 ttggcgatgg gcgacggtgc gaacgatatt ccgatgctca aagaagcggg cataggcgtg
     4621 gcttaccgtg ccaaaccgaa agcgcgggcc gccgccgatg cctgtatcaa tttcggcggt
     4681 ttggagcgtg tacgcggcct gttcggatag gcggatagga aacggatgtc gtccgaaagg
     4741 ttttcagacg gcatttgaac ggcaggaacg acagtgggac gcagaaaact ttggtttgcc
     4801 ctggcagcag caggcgttat cggcggtttg gtcggcattg tgctgacgga actgatgcac
     4861 ttcatacagc atacggcata cggttatggc gcggacggtg cgtacatctc gttccgcgaa
     4921 ggtgtggccc gtgcttcgga agggcggcgt ttaggcgtat tgattctgtg cggtatgttg
     4981 gcaggcggcg gctggtggtt gctcaaacgt ttcggtaagc cgcaaatcga aatcaaagcc
     5041 gccttgaagc agccgttgca ggggctgccg tttctgacga cggttttcca tgttctgctg
     5101 caaatcataa cggtcggact cggttcaccg ctcggacggg aagtcgcccc gcgtgaaatg
     5161 actgccgcgt tcgcttttgc cggcggcagg cggttgggtt tggatgaaga cgaaatgcgg
     5221 ctgctgattg cttgcgcctc gggtgcaggt ttggcggccg tgtataacgt accgctcgcc
     5281 tccacacttt tcattctcga agccatgctg ggcgtgtgga cgcagcaagc cgtcgccgct
     5341 gcattgttaa cttcagtcat cgccaccgcc gtcgcgcgca tcggcttggg cgacgtgcag
     5401 caatatcatc cggccaacct taccgtcaat acttcattac tttggttttc cgccgtcatc
     5461 ggcccgatac tgggcgtagc cgccgtcttt ttccagcgta ccgcccaaaa gttccccttt
     5521 atcaagcgcg acaatatcaa aattattccc ttggccgtct gtatgtttgc actcatcggc
     5581 gtgatttccg tttggtttcc cgaaattttg ggcaatggca aagcaggcaa tcaactgacc
     5641 tttggcggat tgaccgattg gcaacacagc cttgggctga ccgccgtcaa atggctggtc
     5701 gtcttaatgg cgcttgccgt cggcgcatac ggcggtctga ttaccccgtc catgatgctc
     5761 ggcagtacca tcgcctttgc tgctgccacc gcgtggaaca gtgtttttcc tgaaatgtcc
     5821 tctgaaagcg cagccattgt cggcgccgca gttttcctcg gtgtttccct taaaatgccc
     5881 ctgaccgcca tagcctttat tttggagctc acctacgccc ctgttgcctt gctcatgcca
     5941 ttatgtacag gcatggcagg tgcagtatgg gtggcaaaga aaatgggatt taaataggca
     6001 aaagcaaaag gccgtctgaa accaagtttc agacggcctt ttacaataaa attgttaaca
     6061 atatttgcaa aaacctactg ccaaaaatgc gaaactgggg gataataccg ccctgaaaat
     6121 tcatcccata ctgattaaac cttcaacaaa ggaaatccaa atgtcttcca tcaaacgcgc
     6181 cctgatcagc ctatccgaca agacaggcgc agtcgaattt gcccaaaccc tgcacaaact
     6241 cggtgtcgaa attctttcta ccggcggtac agcaaaactc ttggctgatg caggcgttcc
     6301 cgttatcgaa gttgccgact ataccggttt tcccgaaatg ctcgacggcc gcgtgaaaac
     6361 cctgcatccg aaaatccacg gcggtattct cggtcgtcgc gatttggacg aacacgtcgc
     6421 caagatggaa gaacacggca tcggcaatat cgacctcgtg tgcgtcaacc tctacccctt
     6481 cgctgccacc atcgccaaac caaactgcac gctggaagac gcgattgaaa acatcgacat
     6541 cggcggcccg accatggtgc gctctgccgc gaaaaactgg aaacacgtcg ccatcgttac
     6601 cgacaccgcc gatttcccgg ccatagctgc cgaactcgaa gccaacaacg gcgcattgag
     6661 cgacaaaacc cgtttcaacc tctcgcgcaa agcattcagc cataccgccc aatacgacgg
     6721 tatgatttcc aattacctga cctcgctttc agacgacgtc ttgagcggca cgcccgaaat
     6781 cgccggattc cccggccggt tcaatcaaag ctggattaaa gtgcaagaca tgcgctacgg
     6841 cgaaaacccg catcagcgcg ccgcgttcta ccgcgatatt gaccccgccg caggcagcct
     6901 cgctgcatac aaacaactgc aaggcaaaga attgtcttac aacaacatcg ccgatgccga
     6961 tgccgcatgg gaagccgtca aatccttcga cgtgcccgcc tgcgtgattg tgaaacacgc
     7021 caatccgtgc ggcgtagcca tcgcctccaa taccttggat gcctacaaac tcgcctacgc
     7081 caccgacacc accagcgcgt tcggcggcat catcgctttc aaccgcgaag ttgacggcgc
     7141 aaccgtcaaa caaattaccg acaaccagtt tatggaagtc ctcatggcgc ctaagttcac
     7201 cgccgaagcc ctcgaaatcg ccgccgccaa gaaaaacgtg cgcgtattgg aagtgccgct
     7261 tgaggcaggc gcaaaccgct tcgaactcaa acgcgtcggc ggcggactgt tggtgcaaac
     7321 gcccgacatc caccgcatca gccgcgccga tttgaaagtc gtctccaaac gccaaccgac
     7381 cgagcaggaa tggaacgatt tgctgttcgt ctggaacgtc gccaaatacg tcaaatccaa
     7441 cgccatcgta ttcggcaaag gcggtcaaac ctacggcatc ggcgcaggcc aaatgagccg
     7501 cgtggacagc acccgcatcg ccgcccgcaa agcgcaagat gccggtctcg acctcaacgg
     7561 cgcgtgtgcc gcatccgatg ccttcttccc cttccgcgac ggcgtggacg tgattgccga
     7621 acagggcatc aaagccatca tccatccggc aggctcgatg cgcgatcagg aagttttcga
     7681 cgcagccgac gaacacggca tcgccatggt cgtaaccggc atccgccatt tccgccattg
     7741 atgcagataa acaaggtaat gccgtctgaa gggctttcag acggtatttt gcgctatttt
     7801 gcgaaggtag ggatgacggt tcgggtattc ctgacagggt ggattttcaa ggtgttgtat
     7861 agggtgtagg aggattcgta aaaggtggga tgcagggtgt gcttcagccc gctgcatcaa
     7921 aaatttttgg agaaccggcg ggagtcggcg gttttggttt cggcggggac ggtggaaatg
     7981 ggtaacattg acggaatcga cggaagcggt gggctgaagc ccacccttgt atattggaat
     8041 cactgtatca tagcaacaaa ccgcccgacc gccacccgcg cccacccaag gcacacaacc
     8101 gttgcgtagc acagggagcg gcagggcaac ccatcgacac aaccggacag ttgcccgaca
     8161 acacaaccga atgcaaggca ggttgatgat gagtacccaa taccattacg caggtatagt
     8221 gaattaaatc taaaccagta cagcgttggt tcgcc
//
LOCUS       DAXHRP010000089         8249 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.089, whole genome shotgun sequence.
ACCESSION   DAXHRP010000089 DAXHRP010000000
VERSION     DAXHRP010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.089"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(149..1081)
                     /gene="cysK"
                     /locus_tag="ACFM72_001394"
     CDS             complement(149..1081)
                     /gene="cysK"
                     /locus_tag="ACFM72_001394"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HFC6257950.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1275..1880)
                     /locus_tag="ACFM72_001395"
     CDS             complement(1275..1880)
                     /locus_tag="ACFM72_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257951.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIALWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1877..2728)
                     /gene="dapF"
                     /locus_tag="ACFM72_001396"
     CDS             complement(1877..2728)
                     /gene="dapF"
                     /locus_tag="ACFM72_001396"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HFC6257952.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIISRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            2865..3161
                     /locus_tag="ACFM72_001397"
     CDS             2865..3161
                     /locus_tag="ACFM72_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257953.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANRILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3175..3843
                     /locus_tag="ACFM72_001398"
     CDS             3175..3843
                     /locus_tag="ACFM72_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC6257954.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3916..6036)
                     /gene="pnp"
                     /locus_tag="ACFM72_001399"
     CDS             complement(3916..6036)
                     /gene="pnp"
                     /locus_tag="ACFM72_001399"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HFC6257955.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTSV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6273..7136)
                     /locus_tag="ACFM72_001400"
     CDS             complement(6273..7136)
                     /locus_tag="ACFM72_001400"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HFC6257956.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKVLEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERSIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDENGRLTLMDE
                     VLTPDSSRFWPADQYEVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7336..8199
                     /gene="rfbD"
                     /locus_tag="ACFM72_001401"
     CDS             7336..8199
                     /gene="rfbD"
                     /locus_tag="ACFM72_001401"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HFC6257957.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     VFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSATIIRLLQHSNPVRGIYHYAGGKSVSWYE
                     FVQHIFQAASQQQTSFPIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         1971 a         2387 c         1914 g         1977 t
ORIGIN      
        1 atatttccct caagcgatgt ggcgacacca acacctgatt aaaacacaac cggcgttttc
       61 ggcatatatg caaaaacgca tttcccagca cggcgttaca ccgataccga aaaatgcgtc
      121 tgaatgtttc gacaatccga ttaaagcatt atgccaaatc tgcaaaaagt ggcgtagaga
      181 gatagcgttc gccataagaa ggcagcagca cgactatcag cttgccttcg ttttcaggct
      241 gtttggcaag ctgcaacgca ctccaaaccg ccgcaccgga agaaataccc accaaaatgc
      301 cttctttttc cgctattgcg cgggcggttt caaaagccgc ttcgttcgac actttggtaa
      361 tgctgtcgta aattttggta ttcaaaacgg tcggaataaa gcctgcgccg atgccttgaa
      421 tcgggtgcgg gcctttttcg ccgccgctca atacgggtga agcttcaggc tcgacggcaa
      481 ccactttaac ttcgggtttg tattttttca acacttcgcc cacgccggta atcgtaccgc
      541 ccgtgccgac gccggcaacg aagacatcga ctttgccgtc cgtatcccgc caaatttcct
      601 cggcggttgt tttgcggtgg acttcggggt ttgcctcatt gtcgaactgg cgcggcataa
      661 aataagtgtc gggatgcgcg tccaccaagg atttcgcttt ggcaatcgcg cccgccatac
      721 cttcggcggc aggggtcaga atcagctccg caccaaacgc gcgcaacagc attttgcgct
      781 ccttactcat gctttccggc atggtaatcg ccagcttgta gccgcgtgcg gcacatacca
      841 ttgccaaacc gacacccgta ttgccgctgg ttgcttcgac aatgacggtg tttttgttga
      901 ttttgcccgc tttttcggca ccctcgatca ttgcttcggc aatgcggtct ttgacgctgc
      961 tgcctggatt gaaaaattcc agtttcacgg caacctccgc cttcaaacct tcggtcagac
     1021 ggttcagttt gaccaaaggc gtgttgccga ttagttcggt gatgctgttt gcaattttca
     1081 tcttctgctc ctgaataata aggtttcgac agtaaggcgc aatccccata ggcatcctgt
     1141 ccgattgcag gggatttgcg ccgaaacata aacaaatttc ggatatggct ttatcctaaa
     1201 cctatgccgc ctaaaaaacc aatatccaaa atttctttct ttataacttt ttgttccgat
     1261 acggccgcac cgtattatct tccaatttct gaaagcagca gcaccagtac cgagacctgc
     1321 atcaacgctg ctgtcaaccc gccgagtcgc agctgcgagc cgccgaacgt tgacggcggc
     1381 tgccggtcta taccgcagcg gtggacatag gcaaccgcca tcagcacaaa ctgcaacacg
     1441 aaccaataaa ccggcttcag cgcataaagt ttgagcagtg ccgcaaacac aaacacttga
     1501 accgttcccg aaaagcaata atgcaccaac gcacatattc cgacaaaagc aagcgtcatc
     1561 gatacattac tgacggcaaa cagcccgagc agaggatgtt cggggtctgc ctgccatccg
     1621 tttccatccg ttttccggtt ccaatgcccg atgaaaaaaa atatgctgcc caaagtcagg
     1681 taaaaatggg ggatgaacaa gggcgcggcg cgggtcattc cccatatgcc gggcatcagc
     1741 tttgccccca aaaccgatat gccgagccac agcgcaatac tcgcccaaaa ccattgcaac
     1801 attcctgcgc ggaatatcag aaacagaaaa accgccgcat acagtaaggc agacaaaaaa
     1861 tccaaatgca gcaaaatcat gaatacgcca actcgccttc aaacacggtt tccgcagggc
     1921 cggtcatcat cacatcgccg ccgcaggccc attcgatata taaagttccg cccggcaaaa
     1981 tcacctctac cgttttccct tcatccaaca accccagacg gatacccgcc accacagccg
     2041 cacacgcgcc cgtaccgcac gcttgggttt cgcccacgcc gcgctcgaac acgcgcaaac
     2101 gaatcgcggt tcggctgata atctgcataa agccgacgtt gacgcgttcg ggaaactgcc
     2161 tgtgcggttc gataagcgaa ccggtttcgc gcaccggcgc gcattctacg tcatcgacca
     2221 caatcaccgc atgggggttg cccatattga cgcagctgac aggctgaatg ccggattcga
     2281 gatgcacccc gtaaatacag gcatcatccc cctcgcccga ttcggggaca aacggtattt
     2341 cagacggcat aaacctcggt ttgcccatat tgaccgtaac catgccgtta tcggacaatt
     2401 tcggaaaaat aacgccattt gccgtttcaa cacaaatttc tttcttatcg gtcaaaccct
     2461 tgtctgcaac aaaacgggca aaacaacgcg ctccgttgcc gcattgcccg acctcgctgc
     2521 cgtcggcatt gaaaatacgg taacggaaat ccacgccttc ggtttccgaa cgcccgacca
     2581 ccaaaagctg gtcgaagccc acgccccgga aacggtccgc ccatgccgca atcggcgcgt
     2641 cctcgggggt aaaatcctga ctgaccgcat caatcaccat aaaatcgttg cccaaaccgt
     2701 gcattttggt aaatttcaaa gtgttcatat tgttccgaaa tcccgtatcg tctgttgctt
     2761 ccgaatccga aatcccccgc accgaaggga aatgcttcca tctcccgccg cctgaggatt
     2821 aaaatcagcc attatactgt ttgttacccc ttacaagaaa caccatgttc cgcatattac
     2881 tgttgctttt cccttgtgca atccttgccg cctgcacccg aaacataccg gcaaacccgg
     2941 ccgtttcaaa ttgcgcgcat cttcaaaacc gcaccatcct gtattttgac gcacacggca
     3001 aacccgccga cggcgcagta aagggcggat tttacaaaat tatcgaaata cagggtgcaa
     3061 accgcatcct tattcaagac tttaacagca cgggcaatgc cctcggcgga tcctatgtgc
     3121 cggactgccg caaatcatcc cttttcccga aaaatatttg acttcaaact gcctatgaac
     3181 cacgacatca ctttcctcac cctgttcctg ctcggcttct tcggcggaac gcactgcatc
     3241 ggcatgtgcg gcggattaag cagcgcgttt gcgctccaac tccccccgca tatcaaccgc
     3301 ttttggctga tcctgctgct taacacagga cgggtaagca gctatacggc aatcggcctg
     3361 atactcggat taatcggaca ggtcggcgtt tcactcgacc aaacccgcgt cctgcagaat
     3421 attttataca cggccgccaa cctcctgctg ctctttttag gcttatactt gagcggtatt
     3481 tcttccttgg cggcaaaaat cgagaaaatc ggcaaaccga tatggcgaaa cctgaacccg
     3541 atactcaacc ggctgttacc cataaaatcc atacccgcct gccttgcggt cggaatatta
     3601 tggggttggc tgccgtgcgg actggtttac agcgcgtcgc tttacgcgct gggaagcggt
     3661 agtgcggcaa cgggcgggtt atatatgctt gcctttgcac tgggtacgct gcccaatctt
     3721 ttggcaatcg gcattttttc cctgcaactg aaaaaaatca tgcaaaaccg atatatccgc
     3781 ctgtgtacgg gattatccgt atcattatgg gcattatgga aacttgccgt cctgtggctg
     3841 taagccccat tcattcccga tacccgtaaa aaataccgtc tgaaacctgt tcagacggca
     3901 ctttcaccct aagcgttact cggcggcatt ttcctcacgg gcaggcgcgt ccagcagggc
     3961 tttgatggac agacggacac ggcctctgtc gtccacttcc aatgctttca cgttcaccac
     4021 ctgaccgact tgcaggtagt cgccgacatt gcgtacgcgc tcgtgggcga tttggctgat
     4081 gtgtaccaaa ccgtctttgc ccggcatcac gctgacaatc gcgccgacat tgttgtcgag
     4141 gattttcacc acagtgcctt cgtacacttt gcccacttcc acttcggcag taatctgctc
     4201 gatgcgtttt ttcgccgcat cgccggcttc ttgagtggtt gcggcaatgg taatcgtacc
     4261 gtcttcggca atattgattt ccgtaccggt ttcagcggta atcgaacgga tggtttcacc
     4321 gcccttaccg ataacttcgc ggattttgtc ttggttgatt ttcatcgtga acaagcgtgg
     4381 cgcgtgtgcg gacagctctt gcgggcccgc aacggcggct ttcatctgat ccaagatgtg
     4441 cagacgcgct tctttggcct gtgccaaagc gatttgcata atttctttgg taatgccttg
     4501 gattttgatg tccatttgca gcgcggtaac gccttcggtc gtaccggcca ctttaaagtc
     4561 catatcgccc aagtggtctt cgtcgcccaa aatgtcggtc aggacggcaa atttgttgcc
     4621 ttccagaatc agacccatcg cgataccggc aacgtgtgct ttcaaaggca cgccggcaga
     4681 cagcaggctc aggcagccgc cgcagacgga agccatagag gaagagccgt tggattcggt
     4741 aatttcggag accacgcgca tggtgtagct gaaatcttca ggtttcggca atacggccaa
     4801 caatgcacgt ttagccaaac ggccgtgacc gatttcacgg cgtttcggtg cgcccatgcg
     4861 gcccacttcg ccggtagagt acggcggaaa gttgtagtgc agcataaagc ggtcggtgta
     4921 ttcgccggac agcgcgtcga tgatttgctc gtcgcgcgaa gtacccaaag ttgcaacggc
     4981 caaagcttgg gtttcgccac gggtaaacaa tgcagaaccg tgcgtgcgcg gcaatacgct
     5041 ggtttggatg ttcagcggac ggacggtgcg ggtgtcgcgg ccgtcgatgc gcggttggcc
     5101 atccaaaatt tggctgcgga cgacatcggc ttccaagtgt ttgaaaatgc ctttgatttc
     5161 gttggctgcc aaagtgtcgg tttcttcggt aatcaaggct tcttttaccg cactccaagc
     5221 ttcgtccaat ttggcagaac gcgcttgttt ttgacggatt ttgaacgctt ctttaatggt
     5281 ttcgccggca atcccgcgga ctttggcaac cagttcctca ttggtttcag gtgctttcca
     5341 atcccaaagt tccggattga cttcgtcggc aaattcattg attgcattga tggcaacctg
     5401 catttgatcg tggccgtaaa ccaccgcgcc cagcatcacg tcttcgggca ggattttggc
     5461 ttcggattcc accatcaaca cggcttttga agtaccggcg accaccaagt ccaattgcga
     5521 tttcgccaat tcggctttag tcggattcaa aacgtacacg ccgtttacat aaccgacgcg
     5581 tgccgcgccg atcgggccgg caaacggtac gccgctcaac accagcgcgg cagatgcacc
     5641 caacattgca ggaatatcag aatcgatttc aggatcgacg gacacgacca tcgctacgat
     5701 ttggatgtcg tggtagaaac cttcagggaa cagcggacga atcggacggt cgatcagacg
     5761 gctggtcagg atttcttttt cgctttgttt gccttcgcgt ttgaagaaac cgccgggaat
     5821 tttgcctgcg gcgtaagtgc gttccaaata atcgacggtc agagggaaga agtcttggcc
     5881 ttctttcact tctttgttgg tggtaacggc aaccaaaacc acggtgtcgc ccatagagac
     5941 tttaacggca gcggcggctt ggcgggcgat ttcgccggtt tccaaagtaa cggtgtggtt
     6001 gccgtattgg aaagttttaa cgtgtttgtc gaacattatt gttcctttca aaataccgca
     6061 ctgctaaaac actaataatg cacactaaaa tccgaatgtg catagttagg gtttcagacc
     6121 gtgcggcagg ttgtaaacaa gctttcagac gacatttcgg acgctgaaag caattgcgga
     6181 ttataaaggc aaccatcctt aaaatccagt attgatacaa taaaaaggtc gtctgaacca
     6241 tatttctttc agacggcctt caaacttaaa aatcaatcct gagtcagcaa agtcaatgct
     6301 tcccgatact tctcgacagt tttctgaatc acatcggcag gcactttcgg cgcaggggct
     6361 tttttgttcc aaccgctttg ttccagccag tcgcggacga attgtttgtc aaaagacggc
     6421 ggattggtgc cgacttcata ttgatccgcc ggccagaagc ggctcgaatc gggagtcaat
     6481 acctcatcca tcagcgtcag cctaccgttc tcatccaaac cgaattcaaa tttggtatcg
     6541 caaatgatga tgccgcgcga tttagcatat tccgccgctt ctgtataaag ctgaatcgct
     6601 ttggcgcgca cttccgccgc caattctttt ccgatactgc gttcgcattc ttcaaagctg
     6661 atgttttcat cgtgatcgcc gactgcggct ttggttgagg gcgtaaaaat cacttcaggc
     6721 agttgttgcg cttcctgcat accttcgggc agccgaatac cgcaaaccga gccggttttt
     6781 tgataatctt tccaaccgct gcctgccaga taaccgcgca caatcgcctc tactttcacc
     6841 ggagtgagct ttttagccac gacggcgcgt ttttctaaaa ctttggcttc gttttcaggc
     6901 aaaacatcgt aaaccgtttg accggtaaag tggttgggca taatatgcgc cagtttttta
     6961 aaccaaaaat tggaaatctg cgtcagaatc tcccctttgc tcggaatcgg gtcgtccaaa
     7021 atcacatcaa acgcggacag gcggtcggaa gcgaccatca gcatacgttt atcgtcgatt
     7081 tcatataaat cgcgcacttt tccagaatag atctttacca aaccaatctc actcatttcg
     7141 cccccccctg aaaatatctt gaaaataccg acccgacacc cgacaggttt gaatcgcaaa
     7201 ccgatattct agccgaagtc ggcgcaaaac aatacccatg gcacaaaaag ccaacccgtc
     7261 aaccgtcggc aaagttttgg cactataata ccgacagcaa gtcctacaat acacttttac
     7321 caaaggaaat acctcatgag aatcctattg acaggctcga aaagccaact ggcacgctgc
     7381 ctgcgcgacc gtcttccgga agactgggaa accattgcga cggattccgc atccctagac
     7441 attaccgatg ccgatgccgt ctgcaacatg gtcaaaagtt tccaacccga cgccattgtc
     7501 aacacggctg cctatactgc cgtcgacaaa gcggaaggcg atgcggcagc ggcatttgcc
     7561 gtcaatgctt ccgccgttta caaccttgcc ttggcagcac atcgcgccca tgcccgattc
     7621 atccacatct caaccgacta tgtctttgac ggaaaaggga aaagacccta ccaggaaagc
     7681 gactttacca acccttccaa tgtatacgga caatccaaaa ccgccggcga actgctcgca
     7741 ctgtctgcca atcccgacag ccttatcctg cggacttctt ggctgtttag cgaatacggg
     7801 gacaactttg tccgcaccat gctgaacctt gcgcgggaac gttccccgct gtccgccgtc
     7861 cacaaccaaa tcggctgccc gacctatgcc ggcgacttgt ccgccaccat catccgcctg
     7921 ttgcagcact ccaatcccgt tcgcggcatt taccactacg ccggcggcaa atccgtatct
     7981 tggtacgaat ttgtccaaca tattttccaa gcggcatcgc aacagcagac atccttcccc
     8041 attcccgaat tgactgccgt ttcagacaag gaatatccga ccgccgcccc caggcccgca
     8101 tacagcattt tggactgccg caaaatcgaa aacgacttcg gcatcaaacc gtcagactgg
     8161 caaaaagccc ttgcacaggt cgtttccaag ctgctctgat gccgcccgcc tctccgtttc
     8221 cgccgtcaag caccgccttg gcggttttc
//
LOCUS       DAXHRP010000090         8021 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.090, whole genome shotgun sequence.
ACCESSION   DAXHRP010000090 DAXHRP010000000
VERSION     DAXHRP010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.090"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(68..814)
                     /locus_tag="ACFM72_001402"
     CDS             complement(68..814)
                     /locus_tag="ACFM72_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC6257958.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(798..977)
                     /locus_tag="ACFM72_001403"
     CDS             complement(798..977)
                     /locus_tag="ACFM72_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257959.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(993..1664)
                     /locus_tag="ACFM72_001404"
     CDS             complement(993..1664)
                     /locus_tag="ACFM72_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HFC6257960.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACFM72_001405"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACFM72_001405"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HFC6257961.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFICIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACFM72_001406"
     CDS             complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACFM72_001406"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HFC6257962.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACFM72_001407"
     CDS             complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACFM72_001407"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HFC6257963.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKCADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDVRNLKLTQPQD
                     AYIVRLLLDAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACFM72_001408"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACFM72_001408"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HFC6257964.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVAHTETKRSGKLKVIRADENELAEHG
                     RYLDGLGEACIWRKTQMPSENGGTEA"
     gene            complement(4571..5881)
                     /locus_tag="ACFM72_001409"
     CDS             complement(4571..5881)
                     /locus_tag="ACFM72_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC6257965.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACFM72_001410"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACFM72_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HFC6257966.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="ACFM72_001411"
     CDS             complement(6056..6355)
                     /locus_tag="ACFM72_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257967.1"
                     /translation="MHYFSIHDQWGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6707..7903
                     /locus_tag="ACFM72_001412"
     CDS             6707..7903
                     /locus_tag="ACFM72_001412"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC6257968.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         1885 a         2412 c         1958 g         1766 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcgctgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg ctcggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcatagt cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ttgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcac gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacaaggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatatcgga atcggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tatgccgttt tcgagcacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggctg atcgatattc aagccgtgga catcgacgat ttggttgccg taaaacgtgg
     1921 tgtagccgat acgcagttcg ggctgtccgc ccatagcgag cagtttgcgc gaaacaaggg
     1981 aacgcgcgct ttcgacgact tccacgggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag atgaattttt ctgatgcgct ggcgacgatt ttttcgttga
     2101 ggtgcgcgcc gccgccgccc ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 cgatatagac cgccaaaccc gatacttcgt tcagggaaac gacgggaatg tcgtactggg
     2221 caagcagttc gctggatttt ttggaggttg aaaccgcgcc tttgattttt ttgccgcttt
     2281 tgcccaaggc ttcgatgaaa aagttgatgg tcgagccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatcctt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacggcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcatcgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cacgtcgccc tgtatcagta gcggacgcac acccaatttt tccacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagcccgg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgacg gttgcactaa tgttcccacc
     3241 gtccgcgcac ttgagcgtat cggcaacggg aattgccaaa atcccacctt cggcagcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcaac gcgcggcatc
     3361 gtgtaccaga atattgtcgg tttccgccgc caaaccggtt tccaacagtt ttgccacacc
     3421 gttgcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacggcctca tgccgttcaa aaatcccaag cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatac tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagggcgata tttttgcgtt tcatgcctcc gtcccgccgt tttcagacgg catctgcgtc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatc gcccgtgctc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagtttg ccgctgcgtt tggtttcggt atgcgccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaattg ccgccgcgtc
     3901 atcgctaaat aaacttcgcc caaaagctcg cagtcgatca gcgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctctatc gtcagaccgt gcaccctcgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca gaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tttctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc agcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgata gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atggcggtaa aaacgggctt gtgccgcacc gtttcacgca
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg ggtatcggca gccttggcgg
     5281 gtacggacgg cataaacagg ctgccgaccg tgcctcctac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac agcaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg aatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgtgcttc cgattcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtccccatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 tgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt tccgtcaaaa tacccgactt ccgccatttt cacgcaaacg cccgattaag
     6541 ccaagcaatt gcaaagattt tttgctagaa tagcctgctt cttttatcaa ccttttcaga
     6601 cggccccact actttcccgc ctaggaaggc aaaacggatt cggcacgaat ccggttagta
     6661 tccgtgtccg attccaatgc cgtctgaaac tttccggagt aagaaaatgt cccaaaaatt
     6721 gatcttggtt ttgaactgcg gcagctcgtc cctcaaaggc gcggtcctgg ataacggcag
     6781 cggcgaagtc ctgctcagct gccttgccga aaaactcaac ctgcccgatg cctacatcac
     6841 attcaaagta aacggcgaaa aacacaaagt cgatctgtcc gcacatcccg accacaccgg
     6901 cgcggtcgaa gccctgatgg aagaactcaa agcccacggc ctcgacagcc gcatcggcgc
     6961 catcggccac cgcgtcgtca gcggcggcga actgtacagc gaatccatcc tcgttgacga
     7021 cgaagtcatt gccggcatcg aaaaatgcat cccgctcgcc cccctgcaca accccgccca
     7081 cctcttgggc ctgcgtgccg cgcaaagcat tttcaaaggc ctgcccaacg tcgtcgtatt
     7141 cgatacctcc ttccaccaaa ccatgcccga agtcgcctac aaatacgccg ttccgcagga
     7201 gttgtatgaa aaatacggcc tgcgccgtta cggcgcgcac ggtaccagct accgcttcgt
     7261 cgccgacgaa accgcgcgct tcctcggcaa agacaaaaaa gacctgcgta tggtcattgc
     7321 ccacttgggc aacggcgcgt ccatcaccgc cgtcgccaac ggcgaatcgc gcgacaccag
     7381 tatgggcctg accccgctgg aagggctggt aatgggtacg cgcagcggcg acatcgatcc
     7441 ttccgtattc ggcttcctcg ccgaaaacgc caatatgacc atcgcccaaa tcactgaaat
     7501 gctgaataaa aaatccggtc tgctcggcat ttccggcctg tccaacgact gccgcaccat
     7561 tgaagaagaa gccgccaagg ggcataaagg cgcgaaattg gccttggata tgtttatcta
     7621 ccgccttgcc aaatacatcg gcagtatggc ggttgccgca ggcggtttgg acgcactggt
     7681 ctttaccggc ggcatcggcg aaaactccga catcatccgc gaacgcgtga tcggctactt
     7741 gggcttcctc ggtctgaaca tcgaccaaga agccaacctg aaagcccgct tcggcaacgc
     7801 cggcgtgatt accaccgccg acagcaaagc cgttgccgtg gtcattccga ccaacgagga
     7861 attgatgatt gcacacgata ccgcccgctt gagcggtctg taagattcaa tccccacgcg
     7921 aactgcctcc gaaaacggag gcagtttttt tatccggctt tccatgctta aacagcaccg
     7981 cctcttttca gacgttgacg gttgcagccg cttacctgaa c
//
LOCUS       DAXHRP010000091         7923 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.091, whole genome shotgun sequence.
ACCESSION   DAXHRP010000091 DAXHRP010000000
VERSION     DAXHRP010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7923
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.091"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..484
                     /locus_tag="ACFM72_001413"
     CDS             <1..484
                     /locus_tag="ACFM72_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HFC6257969.1"
                     /translation="AETPDFNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPA
                     EAPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSF
                     PSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI
                     "
     gene            complement(657..1073)
                     /gene="gloA"
                     /locus_tag="ACFM72_001414"
     CDS             complement(657..1073)
                     /gene="gloA"
                     /locus_tag="ACFM72_001414"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HFC6257970.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(1097..2266)
                     /gene="lapB"
                     /locus_tag="ACFM72_001415"
     CDS             complement(1097..2266)
                     /gene="lapB"
                     /locus_tag="ACFM72_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HFC6257971.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(2277..2591)
                     /locus_tag="ACFM72_001416"
     CDS             complement(2277..2591)
                     /locus_tag="ACFM72_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HFC6257972.1"
                     /translation="MKLIYTVVKIIILLFFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIIFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESTK
                     QP"
     gene            2901..3899
                     /gene="ilvE"
                     /locus_tag="ACFM72_001417"
     CDS             2901..3899
                     /gene="ilvE"
                     /locus_tag="ACFM72_001417"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HFC6257973.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVAELKAAVENGAEA
                     ILTGTAAVISPVTSFVIDGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(4143..4928)
                     /gene="fabI"
                     /locus_tag="ACFM72_001418"
     CDS             complement(4143..4928)
                     /gene="fabI"
                     /locus_tag="ACFM72_001418"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HFC6257974.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGADLAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(5083..5904)
                     /gene="dapD"
                     /locus_tag="ACFM72_001419"
     CDS             complement(5083..5904)
                     /gene="dapD"
                     /locus_tag="ACFM72_001419"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HFC6257975.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(5914..6144)
                     /locus_tag="ACFM72_001420"
     CDS             complement(5914..6144)
                     /locus_tag="ACFM72_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257976.1"
                     /translation="MPSERRRRGIKVPPPFCIDSGAEKAIPAARPIPKRQCSATARVL
                     LTNMRLRGTIAHSFQMNILPENTGKRPTKHLT"
     gene            complement(6114..7757)
                     /gene="pgi"
                     /locus_tag="ACFM72_001421"
     CDS             complement(6114..7757)
                     /gene="pgi"
                     /locus_tag="ACFM72_001421"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC6257977.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALEFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHITVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAACKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPVTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
BASE COUNT         1765 a         2204 c         2146 g         1808 t
ORIGIN      
        1 tgccgaaaca cccgatttca acgccaccgc agacgatttg tccgcattac ttcaaccttc
       61 tgaagcacct gccgttgagg aaaatgcagc ggaaaccgtt gccgatgatt tgtccgcact
      121 gttgcaacct gctgaagcac cggccgttga ggaaaatgca gcggaaatca ctttggaaac
      181 gcctgattcc aacacctctg aggcagacgc tttgcccgac ttcctgaaag acggcgagga
      241 ggaaacggta gattggagca tctacctctc ggaagaaaat atcccaaata atgcagatac
      301 cagtttccct tcggaatctg taggttctga cgcgccttcc gaagcgaaat acgaccttgc
      361 cgaaatgtat ctcgaaatcg gcgaccgcga tgccgctgcc gagacagtgc agaaattgct
      421 ggaagaagcg gaaggcgacg tactcaaacg tgcccaagca ttggcgcagg aattgggtat
      481 ttgattccca actgcccttt cgcagatcaa ggatgccgtt tcagacggca tctttttttg
      541 ccttatcggt gtaacggata aagtttgaac cggcacaggc tcaaacagca ggccgacggc
      601 aacaaaatgc cgtctgaaac ccctaaaggc ttcagacggc attggcggcg gcggtatcag
      661 gcagtttgat aggcaaccga atcgtcaccg cttttctttt gaatgaactc gattttgtat
      721 ccgtcggggt cttcgacgaa ggctatcacg gttgtgccgt gtttcatcgg gccggcttcg
      781 cggacgacgt ttccgccctg ccgcttcaca cgttcgcagg cttcgtaggc atcgtccact
      841 tcaaccgcga tgtgtccgta ggcgttgccc aagtcgtatc gttccgtatc ccagttgtgc
      901 gtcagttcca aaaccgtgct gtcggtttcg tcgccgtaac cgacgaaggc aagggtaaat
      961 ctgccttcgg gataatcttt tcggcggagc agtttcatac ccaaaacgtt ttggtagaaa
     1021 tcgagggatt tttcgagatt gcccacgcgg agcatagtat ggagtaagcg catttttgtg
     1081 ttcctctcgg tagtggttaa acttcgattt tgtttggcgt aaacgtctgc catttgttgc
     1141 aggcaggaca atgccagaaa aagacttgtg atttgaagtg gcagtttcgg caccggtaca
     1201 tcacgctgcg ctgtagctgc cgtccgataa ccgaacgcat catatcggca tcggctttcc
     1261 aagccggatc caaatcgctg agtttcaaac caagcaggcg gtacacgccg ttgaggtcgg
     1321 gcttgcggcg gacaagctcg acggcggttt gcgcggcttc tttctcgcac ttaagcagca
     1381 gggatttctc gtacacgaca ttgatcaggt caagttcggg aaacgtctgc atatatcctg
     1441 tcagacggtt caagccttct tcaggttttc cctgcgcggc ataggcttcg taaagcttct
     1501 cgccgaccat gctcaagtat gcatggtttt gctgctcgat ggcggcatag gcttcgacgg
     1561 cggcagggaa attgccttgt cggtgttcga tgtcgcccaa aatcatgttg gcgcgggtgc
     1621 attttttgtt ggcttcgagt gccttgccga cattgaaacg cgcgacatcg aaattggact
     1681 tgaacagcgc ggcttgggca agttcgcaat aaaactgggc gatttcaaac tgataggtct
     1741 gatcgtcatg gctgagcagc cgggcggttt caaccgcttt ttcccaatcc ctgtcctgtt
     1801 ggtagatatt gagcaggtgc tgtctggctt cacgcgccat tttaccgtct tgcagcccca
     1861 aaaaaatctg ttcggcacga tcgaccaacc ccgcactttg gtagttttgc gccaattcaa
     1921 acaggacgcg cgcgcgcttt tcgccgaccg tatcgggaga atcgagcatt gtccggtgta
     1981 tgttgatggc tttgtcgttt tcgccacgct ggcggtaaag tttgccgagg gtgaggttca
     2041 aatcatacga ttgcggccgg ccgtcgacga cttccgccaa ctcccttgcc gcgcgcccgc
     2101 tgttgcggtc gaccaaagcg tccaagcttt tataaaatcc cgaagggatg ctttttgcct
     2161 gcttcaatac ggttttcata tccacgcggg cggcaaacca gcccatcgcg aagaagacgg
     2221 gcaaaaggat aatcggcagc aggataatcc acaattcgtt gtccatatcg gctttcttaa
     2281 ggctgtttgg tagattcggg cgcattttgc gccggtggtg cggtcagctc cttccccgtc
     2341 aaacgcgcat ttttctttac ttcggcacgc aacctgccgt tctcgccacg taacgacaac
     2401 aaccgtccga acaaggcaaa cattccaaaa ataataccga ctacaaatgc gccgaacaat
     2461 acgacaatca gcggcaaatc gaatttttgc cccggcaggt aggagaaggt aacggcatcc
     2521 gtattaatga cggcaagcag caggaagaac agcaggataa tgattttgac gacggtatag
     2581 ataagtttca tgtttgctcc gtaaataaaa acgccgcccg gacagcttcg cactctgaac
     2641 caagattgcg ctagtttaaa cgatttgcac ggtttcggat aggatgcggc agcgtgttcg
     2701 gacgacatac ggagtatgcg attgccgaca attttaccaa atacaccgtt cctttccatt
     2761 tgaaaaataa cggattggac accgcatcga cagaaaaacc cgccgcgcac ttgtcaaaac
     2821 cctgtttgca ggcgtatctt tacaatcttc aaattcaaac cgttcattga aacatatcag
     2881 aataagaaag gctttacatc atgagcagac ccgtacccgc cgtattcggc agcgtttttc
     2941 acagtcaaat gcccgtcctc gcctaccgcg aaggcaaatg gcagccgacc gaatggcaat
     3001 cttcccaaga cctctccctc gcaccgggcg cgcacgccct gcactacggc agcgaatgtt
     3061 tcgagggact gaaagccttc cgtcaggcag acggtaaaat cgtactgttc cgtccgactg
     3121 ccaatatcgc gcgtatgcgg caaagtgcgg acattttgca cctgccccgc cccgaaaccc
     3181 aagcctatct cgatgctttg gtcgaactgg tcaaacgtgc cgccgacgaa attcccgatg
     3241 cgcctgccgc cctgtacctg cgcccgacct taatcggtac cgatcccgtt atcggcaagg
     3301 ccggttctcc ttccgaaacc gccctgctgt atattttggc ttcccccgtc ggcgactatt
     3361 tcaaagtcgg ctcgcccgtc aaaattttag tggaaaccga acacatccgc tgcgccccgc
     3421 atatgggccg cgtcaaatgc ggcggcaact acgcttccgc catgcactgg gtgctgaagg
     3481 cgaaagccga atacggcgca aaccaagtcc tcttctgccc gaacggcgac gtgcaggaaa
     3541 ccggcgcgtc caactttatc ctgattaacg gcgatgaaat cattaccaaa ccgctgaccg
     3601 acgagttttt gcacggcgtt acccgcgatt ccgtgctgac ggttgccaaa gatttgggct
     3661 ataccgtcag cgaacgcaat ttcacggttg ccgaactgaa agctgcggtg gaaaacggtg
     3721 cggaggcgat tttgaccggt acggccgcgg tcatttctcc ggtaacttct ttcgtgattg
     3781 acggcaaaga aatcgaagtg aaaagccaag aacgcggcta cgccatccgt aaggcgatta
     3841 ccgacatcca gtatggtttg gcggaagaca aatacggctg gctggttgaa gtgtgctgat
     3901 gctttaaata aaaaatgccg tctgaaaccc gtttggcgtt tcagacggca ttttcgcatc
     3961 cgaaccgttt ccgctgcacc tgcagcaagt cggcacaaag gcaatcggtt aaaacaagcg
     4021 tccgcatttc ccatcccgcc tgccgtaagt cgggcatttc cctagaaata cgcttcagac
     4081 ggcaaaacgc cgcccgaaac cgatatgcgg cacggacggc gcacggattt gaaaacggcg
     4141 gattatccct cggtgctcaa ggcattgatg ctgtaaccgc cgtcaacgta agtgatttcg
     4201 ccggtaatgc cggacgacag gtcggacagc aggaaggcgg cggtattgcc gacttcttcg
     4261 atggtaacgt tgcggcgcag cggattgtgg gcggcgacgt gtcccaagag tttgccgaaa
     4321 tcggcgatgc cggaggcggc gagtgttttg atcggaccgg cggaaatgcc gttgcagcgg
     4381 atgccttctt tgcccaaaca ggcggcggta aagcgaatgc ccgcctcaag gctggctttt
     4441 gccataccca tcacgttgta gttcggaatc gcgcgcaccg cgcccaagta gctcagggca
     4501 acgatggcgg agtttctgcc gcgcatcatc ggacgggcgg cttttgccaa tgcgggcagg
     4561 ctgtatgcgg aaatttcgtg tgcggtgttg aacgcttcgc ggctgatgct gtcgaggaaa
     4621 tcgccgctca aggcttcttt cggtgcgaag ccgatggaat gcaccaaacc gtccaagccg
     4681 tcccaatgtt tgcccaagtc ggcgaacact tggttgattt cgtcgtcact ggcgacatcg
     4741 cagcggaata cgagttcgga atccaattcc gccgccattt tgcggacgcg ctcttccagt
     4801 ttgtccacaa cgtaggtaaa cgccaaatcc gcgccttgtt cgcggcaggc tttggcgatg
     4861 ccgtaagcga tggaacgctc ggaaatcatg ccggtaatca gaattttttt gccttgcaga
     4921 aaacccattt tgtatccttc aaatagtgtt cggttcattc taaaccgttg attatagcaa
     4981 attgtccctg tttctgtgtt ttcacgttgc agcatgcaaa cggcaatgcc gtccgaagcg
     5041 gatttcagac ggcatcggac gtttcaaata cggtttaagg catcagatgc cgcgcaacaa
     5101 ttcgttcacg ctggttttcg cacgggtttg cgcgtccacg cgtttgacga tgacggcgca
     5161 gtaaaggctg tggctgccgt ctttggaagg catactgccg gacacgacga ccgaacctgc
     5221 cggtacgcgg ccttggtaga tttcgccggt ggtgcggtcg aagattttgg tggattgacc
     5281 gatgaacacg cccatcgaaa tcacgctgcc ttcttcgaca atcacgccct caacgatttc
     5341 agaacgcgca ccgatgaagc agttgtcttc aataatggtc gggctggctt gcaggggttc
     5401 gagtacgcca ccgatgccga caccgccgct caagtggacg tttttaccga tttgcgcgca
     5461 agagccgacg gtcgcccaag tatcaaccat cgcgccttcg tcaacgtatg cgccgatgtt
     5521 gacataagac ggcatcagca cgacattttt ggcaacaaag ctgccgcgtc gggcaaccgc
     5581 acccggaacg gcgcggaagc ctgcgttttt gaactcgtct tcagaccaat cggcaaactt
     5641 ggtcggcact ttgtcgaagt atttgttcac gccgtcgttg aggacttcgt tgtcttggat
     5701 gcggaaggac agcaacacgg cttttttcgc ccattcgttg actttccact cgcccacgcc
     5761 caagcgttcg gcgacgcgca atttgccgga atcgagctgg cggatggttt ccaacacggc
     5821 ttctttgact tcgggagtaa cggtggtcgg ggtgatgtcc gcgcggtttt caaaggcggt
     5881 ttcgatgatg ttttgcaaag acataatgtt tccttatgtg agatgtttcg tgggacgttt
     5941 gccggtattt tcgggcagta tgttcatttg aaatgaatgc gctattgtgc cacgcaaacg
     6001 catattcgtc agcaatacgc gggcggttgc cgaacattgg cgtttcggaa tcgggcgggc
     6061 ggcaggtatt gccttttccg cacccgaatc aatacagaac ggcggcggca cttttatgcc
     6121 gcgccgccgc ctttcagacg gcattcgcgg taaaacgcca tcagcccttc ggtcgaggca
     6181 tcgtgtacgg acgtgccgcc ttccagttcg ccgatgatgg ttttcgccaa ctgtttgccg
     6241 tactcaaccc cccactgatc gaaggggttg acgttccata tcgcgccttg gacgaaggtt
     6301 ttgtgttcgt aagccgccat cagcataccc agattgtagg gcgtgaggcg gtcgagcagg
     6361 atgctgttgc tggggcggtt gccggggaac tctttatgcg gcgcgaggcg ttcgcgttcc
     6421 gcttcgggca aatctgccag ttcggcgcgt gcttcgtcca aggttttgcc cttcatcagg
     6481 gcttccgctt gggcaaaggc gttggcaacg gtaaaacggc tgcgtccgtc ctccacgccc
     6541 tgcgccgtca ccgggacgat aaagtcgcag ggaatcaggc gcgtgccttg gtggagcagt
     6601 tggaaatagg cgtgctggca gttgacccct tcaccgccga acacgatgcc gcccgttttg
     6661 cacgcggcgg gactgccgtc tgaagcgcgg cttttgccca aactctccat atcgagctgg
     6721 ttcagccacg ccggcagcag gcgcaggttg tggctgtacg gaacggcggt ctgcccgtcc
     6781 gcgtgttgga aattgttata ccacacggca atcagtgcca tcagaacggg aatgttgcgg
     6841 cgcggcggcg tgtggaaaaa atggctgtcc atcgcgtgcg cccccgccaa caactcgcgg
     6901 aaacgcgccc cgccgaccgc aaccatcacg ggcaaaccga cgggcgacca gacggaatag
     6961 cgtccgccca cccagtcgta catcgcaaac acgcgttccg ccgcgatacc aaaagccgca
     7021 gctgccgcag tgtcggcaga caccgcgcaa aaatggcacg ccgtttcgga ttccgagaac
     7081 cccgcaccgc gataccacgc cttgactgcc tgtgcattga gcagggtttc cggtgttttg
     7141 aaggacttgc tggcaacgca aaacactgtc gtttcggggt tcagacggca taaaaccgca
     7201 tccaggcagg caggatcggc gttggcggca aaatggacgg tgatatgccg tctgaacggc
     7261 tcaagtgcct gcacgcacat tgccggcccg aggtcggatc cgcctatgcc gatgtggaca
     7321 aaatccgtaa tccgttttcc ggttgtcccc tgatacgaac cgtcgtccaa actgtgtgca
     7381 aactccaacg cacgatttaa ctcgcggcgg atttcgggca acacgtccct gccgtccgca
     7441 taaacggcat ccgcaccgtc gggtaggcgc aaagccgtat gcagcgcggc acgcccctcg
     7501 ctgccgttga ctttcgcacc cgtccgcaaa gcacgcattt tcccttccaa atccgccgtc
     7561 tccgcaagac ggcagagcag ttgcagcgta tcttcgccca aacggttttt gctgtaatcg
     7621 aacaacatcc cgtccaaacg ctcatgcata cgctcaaaac ggtcgggttc gcaggcaaag
     7681 cggtcgcgca aaaggacatg acgcgtatcc tgataatggc gttcgagcgc ataccatgca
     7741 cgggtaaaag cattcatctg ttttccttga tttttcagaa ccggattaaa atgtagcaga
     7801 atgtagttta acaaacggca gcggctttgg cgaatctccg gaacaccgcc cgccgcgtcc
     7861 aatagcacct tatttccata tggcgaaaat atagtgaatt aacaaaaatc aggacaaggc
     7921 ggc
//
LOCUS       DAXHRP010000092         7911 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.092, whole genome shotgun sequence.
ACCESSION   DAXHRP010000092 DAXHRP010000000
VERSION     DAXHRP010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.092"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..1924)
                     /gene="tspA"
                     /locus_tag="ACFM72_001422"
     CDS             complement(<1..1924)
                     /gene="tspA"
                     /locus_tag="ACFM72_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HFC6257978.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     GGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPGLDDAADDGIEITFAE
                     VETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQN
                     GILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTA
                     ENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQ
                     TPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENITETVAETP
                     DFNATADDLSALLQPSE"
     gene            2232..2762
                     /locus_tag="ACFM72_001423"
     CDS             2232..2762
                     /locus_tag="ACFM72_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HFC6257979.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            2765..3055
                     /locus_tag="ACFM72_001424"
     CDS             2765..3055
                     /locus_tag="ACFM72_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HFC6257980.1"
                     /translation="MEYFMLLATDGEDVHEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            3055..3333
                     /locus_tag="ACFM72_001425"
     CDS             3055..3333
                     /locus_tag="ACFM72_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC6257981.1"
                     /translation="MPAVNLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            3382..4248
                     /locus_tag="ACFM72_001426"
     CDS             3382..4248
                     /locus_tag="ACFM72_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC6257982.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            4319..5077
                     /locus_tag="ACFM72_001427"
     CDS             4319..5077
                     /locus_tag="ACFM72_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC6257983.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSEDELHKFYEQQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            5150..5641
                     /gene="dtd"
                     /locus_tag="ACFM72_001428"
     CDS             5150..5641
                     /gene="dtd"
                     /locus_tag="ACFM72_001428"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HFC6257984.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            5672..6682
                     /gene="dusA"
                     /locus_tag="ACFM72_001429"
     CDS             5672..6682
                     /gene="dusA"
                     /locus_tag="ACFM72_001429"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HFC6257985.1"
                     /translation="MNDNTHTLPPRHLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(6752..7639)
                     /gene="gluQRS"
                     /locus_tag="ACFM72_001430"
     CDS             complement(6752..7639)
                     /gene="gluQRS"
                     /locus_tag="ACFM72_001430"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HFC6257986.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARAHGGKWLIRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMGKVPKHAITTP"
     gene            complement(7656..7892)
                     /locus_tag="ACFM72_001431"
     CDS             complement(7656..7892)
                     /locus_tag="ACFM72_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257987.1"
                     /translation="MFYFSINFSKYTELTKLVSRNASNERIADRAFDFFSPALMDGSA
                     TEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
BASE COUNT         1723 a         1963 c         2350 g         1875 t
ORIGIN      
        1 cttcagaagg ttgaagtaat gcggacaaat cgtctgcggt ggcgttgaag tcgggtgttt
       61 cggcaacggt ttccgttata ttttcctcaa cggacggtgc ttcggcaggt tgaagcaatg
      121 cggacaaatc gtctgcggcg gcgttgaaat cgggcgtttc aggcgcagtt tccgcgacgg
      181 catcggtttc gtacactttc aggaaatcgt gcaactcttc cggtgtttgg acttcggcaa
      241 ctgttttttc caagatggtt tcgggcgagg aagccttcag gaagcctgcc agtccggagg
      301 gtgaggcagg ttttgcggaa gctgtttctt ctgtgccgat atggttgttt gagggcaggt
      361 tgtcggagaa atcggtatcg acggtttccg gtttgttttc ggcagtttgg gcgacagatt
      421 ccggttcggg cgtgtcgatg acgatttcga cagggttgta cgggttgaag gtctcgggct
      481 cgtacacgct gtctgtggat tcgatggcgt tccaatcggc atccgcgcgt ttttgggttt
      541 cttcatcctg cgtaagtgcg ccggataaaa tgccgttttg cgcggctgcc aggctgtcga
      601 aatccaagtc gatgcggttg gaaggcgtat cggtttcgac atcgaacgtt tgttttgccg
      661 ataactcttc ttcagattcc ccatctaagg caagtgtgtc gtttacatcg tttttcggag
      721 cgggttcggg cgttgccgga gtttcgactt cggcaaaggt gatttctatg ccgtcgtctg
      781 ccgcgtcgtc aaggccaggc tcttcctcag ggacggattc ttcggtacgg cgcgcgcgtt
      841 tggattgggc aaggcgcaaa agcagcagca gggcgatcaa tgccgcgcct ccgccggcaa
      901 gcagcaaggt gtacgaaccg ccgaacagtc cgctttcggt ttcttcttcg gcagaaacct
      961 gttcgacagg ttcggaaacg gcgttaccgg tttcgtcggt cggcgtgtcg atggcagaag
     1021 cggcggcttc ttggggggcg gattcggcag cggtttccga tgcggcagta tttgcagcgg
     1081 gtacaggttc gggtcgaacg gccggttttt ccgcttttgc ttcgggcgcg gcaacttttg
     1141 cttcaggttt ttcaaccggt ttctctaccg ttgcctgttt ggacggttcg gacggcatgg
     1201 atgcggtttc ggctttgggt ttcgccgttt gcggtttggg ttgttccgct ttgatcctgt
     1261 tcagattcgg aatgtgaagc acgctgcccg cacgcagtct gccgtgtgcg gaaacatttg
     1321 ggtttgcctt cagcagcgca tcggcaacct gttcgagcgt caggtgtttc gggcggatgg
     1381 cggcggcaat ctgtttgacc gtttcgcctt tgcggacggt atgggttttg ccgttgtatg
     1441 ccggtttgac ggctgcgttc gcgctgtctt ttttatcggt tttgcggagg gctttggcgt
     1501 tttgattttc ttgggactct gctgtcggag cggttttgcg gtgtgtcttg ccgtctgaaa
     1561 gtgcagattt ggttttgggc gagtagccga caggatcgag gatggcggtg tattcgcgta
     1621 cctgtgcgcc tgcgccgatg cggaacacca ggacgggatc gcggactgcc tgttcggaag
     1681 aaacggcaat gacggctttg tcgcccaact tgtggacttt ggcggtcagg cctttttcgg
     1741 aaacggtaac gctgccgccg cctagcaggg ctttggcttc ttcgccggtt acggtaatgc
     1801 tgccggaaaa gggttcgtca aggttggact ggatattcag tccgcccagt ccagcatgtg
     1861 cctgaaagga tgcggcaact gcgacggagg cggcaatcag tttgatttgt ctgttgtttt
     1921 tcaagatgta tcccctgtgg gttggcggct gaatacggtt tgaccgcgta cagtctgtaa
     1981 atttcgtcat catcgggcat cggcggggca gtcggccggc gggcatttaa tatgtgaatg
     2041 taccgaccgc cgccacattt taaacggcaa tcattcgccg tttttacaaa ttatgacata
     2101 tctccatctt ttttcaaaaa catctgtgca tatttgcatc aatcaaaaca aaatttgttg
     2161 gttttgcagg tgcaaaaaca gggttctgcc tgtatgatta gcgtttattt gatttgcttt
     2221 ctcatttgga tatgaaattc gtcagcgacc ttttgtccgt catcctgttt ttcgccacct
     2281 ataccgttac caaaaacatg attgccgcaa cggcggtcgc attggttgcc ggtgtggttc
     2341 aggcggcttt tctgtattgg aaatataaaa agctggatac gatgcagtgg gtcggattgg
     2401 tgctgattgt ggtattcggc ggcgcaacca ttgttttggg cgacagccgc ttcattatgt
     2461 ggaagccgag cgttttgttt tggctgggcg cgctgttcct gtggggcagc cacctcgccg
     2521 gtaaaaacgg cttgaaggcg agtatcggca gggagattca gcttccggat gccgtatggg
     2581 cgaaattgac gtatatgtgg gtcggtttcc tgatttttat gggtatcgcc aactggtttg
     2641 tgtttacccg gttcgagtcg caatgggtca actataaaat gttcggctcg actgcactga
     2701 tgcttgtttt ctttattatt cagggtattt atctgagtac ctgtctgaaa aaggaggatt
     2761 gactgtggaa tattttatgt tgctggcaac agacggggag gatgtgcacg aggcgcgtat
     2821 ggcggcacgt cccgaacacc tcaaacggct ggagacgctg aagtcggaag gccggctgtt
     2881 gacggcaggc ccgaatcctt tgccggagga ctccaaccgc gtttcgggca gtttgattgt
     2941 ggcgcagttc gagtctttgg atgcggcaga ggcgtgggcg gaagacgatc cctatgttca
     3001 tgcaggcgtg tacagcgaag tgctgatcaa gccgtttaaa gcggtgttca aataatgccg
     3061 gccgtcaatt tgatccgcga acgcctgcag acgctcgatc cgctggtgtt ggaaatcggc
     3121 gatgagagcc atctgcacaa aggacacgcg ggcaataccg gcggcggaca ttatgccgtt
     3181 ttggtcgtta gcggccgttt tgaaggcgta agccgcctga accgccagaa aacggtcaaa
     3241 tcgctgctca aagatttgtt ttcaggcggc atgattcacg cgctcggcat ccgggcggct
     3301 acccctgacg agtatttcca tacggcggac tgaatgaagt ctgcccgaac atttcaattt
     3361 aaaatttaaa gagagaagat tatgaaagca aaaatcctga cttccgttgc actgcttgcc
     3421 tgttccggca gcctgtttgc ccaaacgctg gcaaccgtca acggtcagaa aatcgacagt
     3481 tccgtcatcg atgcgcaggt tgccgcattc cgtgcggaaa acagccgtgc cgaagacacg
     3541 ccgcaactgc gccaatccct gctggaaaac gaagtggtca ataccgtggt cgcacaggaa
     3601 gtgaaacgcc tgaaactcga ccggtcggca gagtttaaaa atgcgcttgc caaattgcgt
     3661 gccgaagcga aaaagtcggg cgacgacaag aaaccgtcct tcaaaaccgt ttggcaggcg
     3721 gtaaaatatg gcttgaacgg cgaggcatac gcattgcata tcgccaaaac ccaaccggtt
     3781 tccgagcagg aagtaaaagc cgcatatgac aatatcagcg gtttttacaa aggtacgcag
     3841 gaagtccagt tgggcgaaat cctgaccgac aaggaagaaa atgcaaaaaa agcggttgcc
     3901 gacttgaagg cgaaaaaagg tttcgatgcc gtcttgaaac aatattccct caacgaccgt
     3961 accaaacaga ccggtgcgcc ggtcggatat gtgccgctga aagatttgga acagggtgtt
     4021 ccgccgcttt atcaggcaat taaggacttg aaaaaaggcg aatttacggc aacgccgctg
     4081 aaaaacggcg atttctacgg cgtttattat gtcaacgaca gccgcgaggt aaaagtgcct
     4141 tcttttgatg aaatgaaagg acagattgcg ggcaaccttc aggcggaacg gattgaccgt
     4201 gccgtcggtg cactgttggg caaggcaaac atcaaacctg caaaataatt ctgaaaacgg
     4261 gatatggcgg caagacgttc agacaggcgt tttgccgccg cgcaggacag ggaataccat
     4321 gaaacagaaa aaaaccgctg ccgcagttat tgctgcaatg ttggcaggtt ttgcggcagc
     4381 caaagcaccc gaaatcgacc cggctttggt ggatacgctg gtggcgcaga tcatgcagca
     4441 ggcagaccgg catgcggagc agtcccaaaa accggacggg caggcaatcc gaaacgatgc
     4501 cgtccgccgg ctacaaactt tggaagtttt gaaaaacagg gcattgaagg aaggtttgga
     4561 taaggataag gatgtccaaa accgctttaa aatcgccgaa gcgtcttttt atgccgagga
     4621 gtacgtccgt tttctggaac gttcggaaac ggtttccgaa gacgagctgc acaagtttta
     4681 cgaacagcaa atccgcatga tcaaattgca gcaggtcagc ttcgcaaccg aagaggaggc
     4741 gcgtcaggcg cagcagctcc tgctcaaagg gctgtctttt gaagggctga tgaagcgtta
     4801 tccgaacgac gagcaggctt ttgacggttt cattatggcg cagcagcttc ccgagccgct
     4861 ggcttcgcag tttgccgcga tgaatcgggg cgacgttacc cgcgatccgg tcaaattggg
     4921 cgaacgctat tatctgttca aactcagcga ggtcgggaaa aaccccgacg cgcagccttt
     4981 cgagttggtc agaaaccagt tggagcaggg tttgagacag gaaaaagccc gcttgaaaat
     5041 cgatgccctt ttggaagaaa acggtgtcaa accgtaatgg catttccaat accgatgccg
     5101 tctgaagcct ttcagacggc attgcacgtt caggtaagga ggacggctta tgcgtgcggt
     5161 catacagaaa acggtaggtg caaaggtgga tgtcgtgtcc gaagccggca cggaaacctg
     5221 tggcaaaatc gacggcgggt ttgtcgtgtt actcggcgta acgcatagcg acacagaaaa
     5281 agatgcacgc tatatcgccg acaaaatcgc ccatttgcgc gtgtttgaag acgaagcggg
     5341 caagctgaac ctgtctttga aagatgtcgg cggcgcggtg ctgctggtgt cgcagtttac
     5401 gctttatgcc gacgcgacaa gcgggcggcg gccttcgttt tcgcaagccg cacctgcaga
     5461 acaggcgcag cagctttacc tgcgaacggc ggaactgttg cgcggacacg gaattcatgt
     5521 cgaaacaggg cgtttccgca cgcatatgca ggtgtcgctc tgcaacgacg ggccggtaac
     5581 catactgctg gactctttca tgacgcggat ttccccaaaa atgaaggttg ttccggattg
     5641 aaattgaatc cgcaatgata aaatatcgac aatgaacgac aatacacaca cccttccccc
     5701 gcgccacctg tccgtcgccc cgatgttgga ctggacggac aggcactacc gttatatggc
     5761 gcgccagatt acccgcaata cttggctgta cagcgaaatg gtcaacgccg gcgcgattgt
     5821 ttacggcgac aaagaccgct ttttgatgtt caacgaaggc gagcagcccg tcgccctgca
     5881 actgggcggc agcgatccgt ccgatttggc gaaagccgcc aaagccgccg aggcatacgg
     5941 ttacaacgag gtcaacctca actgcggctg ccccagtccg cgcgtgcaga aaggctcgtt
     6001 cggcgcgtgt ctgatgaacg aagtcgggct ggttgccgac tgcctcaacg ccatgcagga
     6061 cgcggtcggt attcccgtta ccgtcaaaca ccgtatcggt gtggacaggc agaccgaata
     6121 ccaaaccgtt gccgatttcg tcggcacgct gcgcgacaaa accgcctgca aaaccttcat
     6181 cgtccacgcc cgcaacgctt ggctggacgg tctttccccc aaagaaaacc gcgacgttcc
     6241 cccgttgaaa tacgattacg tttaccgcct caagcaggag tttcccgggc tggaaatcat
     6301 catcaacggc ggcatcacca ccaacgaagc aatcgccgga cacctgcaac acgttgacgg
     6361 cgtgatggtc gggcgcgagg cgtaccacaa cccgatggtg atgcgcgaat gggacagatt
     6421 gttttacggc gatactcgca gcccgatcga atacgccgat ttggtgcagt gcctctacac
     6481 atacagccaa gcccagatcc aagccggacg cggcacaatc ttgcgccaca tcgtccgcca
     6541 cagcctcggg ctgatgcacg gtttgaaagg tgcgcggact tggcggcgta tgctttccga
     6601 cgcaacgctc ttgaaagaca acgacggcag cctgattctc gaagcgtgga aagaggttga
     6661 gcgggcaaat acgcgcgaat agggcggggc tgtatgtgtg aaatgccgtc tgaaggcttc
     6721 agacggcatt tgtgcgtttg tcgggcggtg tttagggggt ggtaatggcg tgtttcggca
     6781 ctttgcccat atcccagtgt gccaccgccc agtcgagcag ttcggcaggg cggtcggttt
     6841 ccggtgcttc gggcagcttg aggtaacgga acacttggcg gaggagttgt tcgcggcggt
     6901 ttaaatccaa tgcgggggcg agcgtctgtt tcgaccactt ctgcccttgt gcgttggtca
     6961 gcagcggcag gtgggcatat tgcggtgtcg gaacgcccaa acactgctgc aaatagattt
     7021 ggcgcggcgt ggaaacgagc aggtcttgtc cgcggacgat gtgggtaacg ccctgttcgg
     7081 catcgtcggc aacgacggcg agctggtatg cccagtaacc gtctgcacga agcaggacga
     7141 aatcgccgat gtcgcgggcg aggttttggg cgtaaccgcc gacgatgccg tctgaaaagc
     7201 cgatgtcgcg gtcggggacg cggatgcgcc acgcaggctg tttgccttgc ggtgcagggc
     7261 gttgctgcgg attgcggcag cgtccgttat agacgaaccc gtctgcgccc cgccttgccc
     7321 cggtctgcca gtctttgcgg ctgcaatggc agggatagac cagtccggcg gttttcaggc
     7381 ggcatagggt ttcttcatac agggcgtaac ggcggctctg ataggcgact tctccgtccc
     7441 actcgaatcc gaatgcctca agcgtgtgca ggatatggct tgccgccccc ggcatttcgc
     7501 gcggcggatc gaggtcttcc atgcggatca gccatttgcc gccgtgcgcg cgcgcatcgg
     7561 cataggaagc gacggcggtc agcagcgagc cgatgtggag cagcccggtc gggctggggg
     7621 caaaacgtcc tgtgtacata tctggtacag cccctttatt taagactatt aatcaaagcc
     7681 attatctcat ctttattcag ttccatcccg ggctcttcaa gcaaggttaa atcatatagg
     7741 gcattatatt gctcttcggt agctgaacca tccataagag caggcgagaa aaaatcaaag
     7801 gctctatctg caattctctc attacttgca tttctactaa ccagtttcgt caattctgta
     7861 tattttgaaa agtttatgga aaaataaaac agcgaaaaag ttttggtttc g
//
LOCUS       DAXHRP010000093         7889 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.093, whole genome shotgun sequence.
ACCESSION   DAXHRP010000093 DAXHRP010000000
VERSION     DAXHRP010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.093"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(51..2093)
                     /gene="recG"
                     /locus_tag="ACFM72_001432"
     CDS             complement(51..2093)
                     /gene="recG"
                     /locus_tag="ACFM72_001432"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HFC6257988.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2179..2622)
                     /gene="secB"
                     /locus_tag="ACFM72_001433"
     CDS             complement(2179..2622)
                     /gene="secB"
                     /locus_tag="ACFM72_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HFC6257989.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2643..2900)
                     /gene="grxC"
                     /locus_tag="ACFM72_001434"
     CDS             complement(2643..2900)
                     /gene="grxC"
                     /locus_tag="ACFM72_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HFC6257990.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3113..4606
                     /gene="rng"
                     /locus_tag="ACFM72_001435"
     CDS             3113..4606
                     /gene="rng"
                     /locus_tag="ACFM72_001435"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HFC6257991.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4641..5885)
                     /locus_tag="ACFM72_001436"
     CDS             complement(4641..5885)
                     /locus_tag="ACFM72_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC6257992.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRIFVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQPAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEVSADETEIYTLIKTFADNAVRYTPPEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERARVLDPFYRILGTEQQGPGLSIADTLAKKYGGHLEL
                     TDSRRFGHGLLIRALLDKETLK"
     gene            complement(5881..6056)
                     /locus_tag="ACFM72_001437"
                     /pseudo
     CDS             complement(5881..6056)
                     /locus_tag="ACFM72_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(6279..7592)
                     /locus_tag="ACFM72_001438"
     CDS             complement(6279..7592)
                     /locus_tag="ACFM72_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HFC6257993.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            complement(7697..>7889)
                     /locus_tag="ACFM72_001439"
     CDS             complement(7697..>7889)
                     /locus_tag="ACFM72_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257994.1"
                     /translation="IPRVRHAPRSAMIGAVSFESAHRDECPRAVPIPICRLFRIGCRR
                     EMTDGCRNGGRREWEEMTD"
BASE COUNT         1848 a         2336 c         2057 g         1648 t
ORIGIN      
        1 aaatcagatt tccgttacac ttttttccaa tatttcagac ggcattttgc tcacacgccc
       61 aaataccctt ccctgccgga aagccacctt gccaaatgcg cttcgacgat ttcggggttt
      121 tgttcaatca gcatcggggc ggtttcgcgc gcttgttcca agaggtgcag gtcttcttcg
      181 agcttggcga aacgcagcat aggcacgccg ctttggcgcg cgccgagaaa ttcgccgggg
      241 ccgcggatgt tgaggtcttg gcgggcgatt tcaaagccgt cggtgtgttc gtagatgact
      301 ttcagccgcg ctttggcgag ttcgcccaag ggttcggcaa acaggaggac gcacacgctt
      361 tccgccgcgc cgcgccctac ccgtccgcgt aattggtgaa gctgcgccaa gcccatgcgc
      421 tcggcgtgtt cgatgaccat cagggcggca ttgggcacat ctacgccgac ttcgatgacg
      481 gtggtggcga ccaagacgtt cagccccccc gaagaaaacc gcgccatcac ttcggccttt
      541 tcggcggcct tcatgcgccc gtgtaccagt ccgatattga gttcgggcaa tgccgtctga
      601 agccgggcga gggtttcggc ggcggtttgc agttgcaggg tttcgctttc ttcaatcaat
      661 gggcagaccc aatacgcctg ccgccctttt cggcaagtgc cgaggacgaa gccttcgact
      721 tcggcgcggc ggacgttgtt gacgaggcgc gttttaatcg gtgtgcgccc gggcggcaat
      781 tcgtcgatga cggacacgtc caaatcggcg aaaaaactca tcgcaagcgt gcgcgggatg
      841 ggcgtggcgg acatcatcag ctgatggact tcgcgccctt tgtttttgag ggcgaggcgt
      901 tgggcaacgc cgaaacggtg ctgttcgtcc acaatggtca agcccaaatt gtgaaacgcc
      961 acgccgtctg aaaacagggc gtgcgtgccg acggcgattt tgacgctgcc gtcagcgagt
     1021 ttggctttgg cttcgtcttt ggctttttta cgcaaactgc caaaaaggcg gacaacttca
     1081 atgcccaaag gttcgagcca ttgtttaaat ttaataaaat gctgttcggc aaggatttca
     1141 gtgggcgcca ttacagccac ctgcgcaccg gattcgatag ccgtcaaagc agacaaagca
     1201 gccacaatgg ttttgccgct gccgacatcg ccctgcagca ggcggtgcat cgggtaggtt
     1261 tgcgccatat cgcggcagat ttcggaaaca actttttctt gcgcatcggt cagggcaaac
     1321 ggcagggctt ggcgcagggc ttgggtcaat gtgccgtcgc cgcccaatgc cgccgccgtg
     1381 ccgccgatac gcttctgtcg cgccaagcgc atcgaaagct gttgcgccaa aagttcatcg
     1441 aatttgagcc gttgccatgc aggcagcgtg ccgtctgaaa gctgatgaat cgtgaaactc
     1501 ggcggcggcg aatgcaaaag acgcaggctt tcggcgaggt gtggcagctt cagacggcac
     1561 agcagggcat cgggcagcgt gtcgtgcagc ggcgtaacgt ccaacgccgt ctgaataata
     1621 cggcgcaaag tgggctggtt caaaccgttt acggtcgggt aaaccggcgt gaggctttcc
     1681 gccaaaccgc cgccctcggc atcgcggatt ttgggatgaa tcatctcgtc gccgtaaaag
     1741 ccgtgtttga tttcgcccac ggcgcggatg cgtttgccga ccgccgtctg tttctgatgg
     1801 ctggcgtaaa agtggatgaa gcgcagaaaa aggacgctgc cggaaccgtc ggcgatttgg
     1861 acaatcaact gcttgcgcgg tttgaacgtt acttcctgat ggataacctc gccctcgacc
     1921 tggcacggca cgccaatcgg cgcgtcctta atcggcataa tgtgcgtctc gtcctcgtaa
     1981 cgcagcggca ggtgcaacac caaatcccac gcggtatgga ggttgagttt gtcgagcttc
     2041 ttggcggaaa catcggtgat tttgagctgt ttctgggttt cgggcgacat cataggcaga
     2101 ttcctttgaa cgcacctatt ttatccgaaa acaaaaatac cgtctgaaac ggattcagac
     2161 ggcatcggca ggcaggaatc aagccccggc ggcttcggct tcctgctgtt gttggtaaat
     2221 cgcctcaaaa ttaatcggcg cgagcaggac gggcgggaag ccggcacgtg ttaccgtacc
     2281 ggaaacggct tcgcgcgcgt aagggaagag gatgttcgga cacgccacgc ccagcagcag
     2341 ctgcacatct tcttcgggga tgttttccaa acggaaaata ccgctttggg ttacttcgtt
     2401 caaaaacatc gtgcgctcgt tatccaattt ggcggttacg gtaacggtta catccacgtt
     2461 gtagtagccg tcttccagct tttggctgcc ggtggaaacg cgcatatcca cttcgggctc
     2521 gccctgttcc aaaaagattt gcggcgcgtg cggcacttcc aaagacaagt ctttgacata
     2581 cagtcgctcg atgctgaata cgggttgcag ttcttcgctc attttgtttt cctagttggg
     2641 ggttaagggt tcagcagtcc gtccagcccg ccttcctgct ggaggcggta gaggtcggta
     2701 aatccgccga cgtgcgtttc gccgatgaaa atctgcggca cgctgcgctg tcccgaaagc
     2761 tgctgcattt cggcaaaggc ttcggggctt gcatcgacac ggatttcgtc gatatgtccg
     2821 acacctgccg cgtgcagcag ccttttcgcc atcgcgcagt agggacaaaa cggacctgtg
     2881 tacatggtaa cggtctgcat attgggtttc cgaaagtttt gcaatgataa tcaatatagg
     2941 ggcatttccc ctgtttggca agtgcggaac agatgcacgt tcaaacggca tgtgcggaat
     3001 gtgtcaaagt ttctttttta aagtatgata gacattgtga aaaatatttt tgcacccgcg
     3061 ctgcgcggcg gaacggatgc aaaatatttt tattacattt tcaggaaaaa ccatgttgtc
     3121 aggactcccc atccccaaag acatcgcgcg cccgcccgaa acgatattgg tcaacatcac
     3181 gccgcaggaa acgcgcgtag cggtgttgga ggaaaacaat atctgcgagc tgcacatcga
     3241 gcgcaacagc gaacacagcc tagtcggcaa tatctatttg ggcgtggtgc gccgcgtgct
     3301 gcctgggatg cagagcgcgt ttatcgacat cggcttggaa cgcgcggcgt ttttacacat
     3361 cgtcgatgtc ctcgaacaac gccgcaaccc cgaagaaacc cagcgcatcg aacatatgct
     3421 gtttgaaggg cagtctgttt tggtgcaggt catcaaagac ccgatcaaca ccaaaggcgc
     3481 gcggctttcc acccaaatct cgctggcggg gcgtttcctc gtccatcttc cgcaagaaga
     3541 ccacatcggc gtgtcccaac gcatcgaaga cgatgccgaa cgcagcagcc tgcgcgaacg
     3601 cctcgacaag ctcctgccgg aaaatgcctg ccggggctac atcatccgca ccaacgccga
     3661 aaacgccacc gacgaacagc tccagtccga catcgactac ctgaccaaag tgtgggaaca
     3721 catccaagaa caggcgaaaa tccggccgcc ggaaaccctg ctttatcagg atttgccctt
     3781 gagtttgcgc gtgttgcgcg atatggtcgg ctgcgacacg caaaaaatcc tcgtcgattc
     3841 caccgtaaac cacggccgca tgacgcgttt tgccgaacaa tacgtccacg gcgcattggg
     3901 caggatagaa ttgttcaaag gcgaacgccc gctatttgaa acccacaacg tcgagcagga
     3961 aatcagccgc gccctgcaac cgcgcgtcaa cctcaacttc ggcagctacc tgattatcga
     4021 atccaccgaa gcgatgacca cgatagacgt gaacaccggc ggcttcgtcg gcgcacgcaa
     4081 tttcgatgaa acgattttcc gcaccaacct cgaagcctgc cacaccatcg cccgcgaatt
     4141 gaggctgcgc aacctcggcg gcatcatcat catcgacttc atcgatatgg cgcaggaaag
     4201 ccaccgcgaa gccgtgttgc aggagcttgc caaagccctc gccttcgacc gtacccgcgt
     4261 taccctgcac ggttttacca gcctgggact ggtcgagctg acgcgcaaac gctcgcgcga
     4321 aaacttaaac caagtcctct gcgaaccctg cccttcctgc caaggcagag gccgtctgaa
     4381 aacgccgcaa accgtatgct acgaaatcca gcgcgaaatc gtccgcgaag cgcgccgtta
     4441 cgatgccgaa agtttccgca tcctcgccgc ccccaacgtc atcgatttgt ttttggacga
     4501 agaatcgcaa tccttggcaa tgctgataga tttcatcggc aaaccgattt ctctggcggt
     4561 cgaaaccgct tacacgcagg aacaatacga catcgttttg atgtaaaaaa tgccgtctga
     4621 agccttcaga cggcatctgt ctatttcagg gtttccttgt ccaacaacgc ccgtatcaac
     4681 agaccgtgtc caaaacgtcg gctgtcggtc aattccaaat gtccgccgta ttttttggca
     4741 agcgtgtcgg cgatggacag ccccggcccc tgctgctccg ttcccaaaat acggtaaaac
     4801 ggatcgagga cgcgggcgcg ttcggattcg ggaatgccgt tcccgttatc ttccacccac
     4861 acggcgagat atttcccttc gtccgtgaaa cccaaatcga tcctgccttc gggcggcgtg
     4921 taacgtaccg cgttgtcggc aaaggtttta atcagcgtat agatttccgt ttcgtcggca
     4981 gacacttcga catcgcctcc gaccgccacg ccgatgtcct gacgtttttc caaagccagc
     5041 ggcatcagtt cctgcaacac ttggcggaaa cggctttgca gaccgaatgt cgttttcgtc
     5101 agaggggttt catccgactg cgaacgcgcc agtgccaaaa gctgttcgag caggtgtttg
     5161 ttgcgcctga tgctctgctg caaaacggca ggctgccgcg ctgcatcggg tgggagcgac
     5221 atattgttga gccgttccgc ctgaagggaa agggctgtca tcggcgtacg caattcgtgt
     5281 gccgcgtcgg cgacaaaccg ctgacggtgg cggatgtctt catccgcacg tttcaaaagc
     5341 aggttgatgg cggttacgaa ccctctgatt tcactgggaa tattgtccac actcaaagca
     5401 gacaggtcat tgattcggcg ttgttcgaga ctttgcgaca atttgcggac ggggcgcatg
     5461 gctttgtgcg taatccacac ggtcagcagt atcatcagcg gcagtgccgc cagcaggggc
     5521 aacacgcttt gccgtgccgc atccgccgcc aaatcttcac ggtattcgtt ttcctgcata
     5581 acggcaatcc gtccctgttc ggtcgtgcgg atatagacgc ggtaataatc gtcgtccccg
     5641 tccgcctgaa gcgtgtgcag accgtccgcc agatgcgcag gcaggctgac aacagggtct
     5701 tcctgctgcg gcatctgcac gaaaatgcgc gtatcgccgt cgccctcggg caaagtttcg
     5761 ggtttagaat cgggtgcgac gtacaatgcc gcctgacgga gcaggtcgtc ctgcaacgct
     5821 tccgtttcgt ggaaggtttc gtagtaggaa aacatacctg caagcattgc cagcggaaca
     5881 aacatccaaa ccgtcccgcc ccggcaaacc caaatccagc agcatcaagt cataaggctg
     5941 ggcagcggca gccgcgcgcc gtttttgacc caatccaccg catagccgcc gtctttcaaa
     6001 cttgccgaca ccgcctccgc aatcatcgca tcgtcttcca ccagcaaaac acgcatcaac
     6061 tttcccttca aaataaaccg tgcctattct aacaccccaa aattagccgc aatttagcgg
     6121 cctttacgct tgccggtatt tttcaaaact gcagcacaaa aaaaccgcgc cggcaactgc
     6181 cttcagacgg cattggggcg cgattgcaac acacgggcag gcaggcagag cctgcgacag
     6241 accacaggaa cgattcgggc ttcagacggc ttcgccgttt acggcagagg cacgattcct
     6301 gccgctatcg aactggccaa tatcgccagc gacaaacccc acgcccagaa aaacgaataa
     6361 cggatgtgtt tgcccatcga caatttcgcc aaacccaagc ccatccacaa agccggcgaa
     6421 agcggcgtaa caaaagtgcc gacgatactg ccgatcaaca tcgcataacc tgctgcttcg
     6481 ggcgccacgc ccgcctgcga ggtaatctgc tccacaatcg gaaacagtcc gaaataataa
     6541 gcgtccgtac tcaaaaccaa ctcaagcgga atgcccaaca caccgatggc aatatgcaga
     6601 taaggcagca gcgcgtccgg caggatatgc acaatgtctt tggaaatcgc gtccaacatc
     6661 cccgcaccct tcaaaatccc caaaaacgta cctgccgcca aaataatgga cgccatcatc
     6721 accgcgccgc cggcgtgggc ataaatccgc tccatctgtt cctgcgggct gcggtaattc
     6781 aaaagcaacg ccgccgttgc agccagcata aatacataac ccggtgggaa gatgcccgaa
     6841 aaaagcaggc tcatcgccgc caaaaacagc aggacattcc accaaaacag tttcggacgc
     6901 gccaattttt gttcttcttc cgacaaaggc accggcttta tcaaatccgc cacggcgggc
     6961 aacgcgccca actcccggac aatccgcctt ttttcacgca cacccaaaag cagggacagc
     7021 gcaaggataa acaccacacc gataatttgc accgtcaaca aaggcttata caattcgccc
     7081 acatctgcgc ccaacacgct tgcaacccgc ccggtcggcc cgccccacgg cagaaggtta
     7141 atcaatcccg cactggaagt cagcagcaaa aacagcaggt aaggattcat atgcagacgc
     7201 ttgtaaagcg gcaaaagggc ggggacgacc aataaaaacg tcgtcgcacc cgccccgtcc
     7261 aactgcgcca ccaccgacac caagaccgtc cccacactca ctgccacgat attaccccga
     7321 gtcagcttaa tcaaaccgcc tatcatcgga cggaacagcc ccacatcgtt catgattcca
     7381 aaaaacaaaa tggaaaacat aaacataatc acaatctgca tcaccgattt ggtgccgccc
     7441 gaataaaatt cttttaattg ggatacatca aaccccgcca gcaacgcccc aaacagcggc
     7501 accaagatta atgcgatgat gggcgacact ttttccgtca gcagcaacca tacgatgacc
     7561 ccgataatca gcagtccgat aaacgtcagc atcatttctc ctttatttta ttttaaacag
     7621 aaaaccgacc gtgcaggcaa aaccgcccac agacgcggga taagccctgc attctacttt
     7681 tttattttga aacaagtcaa tcggtcattt cctcccattc acgcctgccg ccattcctgc
     7741 atccgtccgt catttcacgg cggcaaccga tacggaacaa ccggcaaatc ggtatcggga
     7801 cggcgcgggg gcattcatcc cggtgcgccg attcaaacga aaccgcccct atcattgcgg
     7861 agcgcggggc gtgccgtaca cgcgggatt
//
LOCUS       DAXHRP010000094         7867 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.094, whole genome shotgun sequence.
ACCESSION   DAXHRP010000094 DAXHRP010000000
VERSION     DAXHRP010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7867
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.094"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(65..262)
                     /locus_tag="ACFM72_001440"
     CDS             complement(65..262)
                     /locus_tag="ACFM72_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6257995.1"
                     /translation="MPSENRSAGVCGALYAVLQDKAQGRAAGCIVATVFLPDGVKNTV
                     ATPTDNEKREQCRLNRVLRRA"
     gene            323..1129
                     /gene="thiD"
                     /locus_tag="ACFM72_001441"
     CDS             323..1129
                     /gene="thiD"
                     /locus_tag="ACFM72_001441"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HFC6257996.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCEAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
     gene            complement(1179..2048)
                     /gene="tehB"
                     /locus_tag="ACFM72_001442"
     CDS             complement(1179..2048)
                     /gene="tehB"
                     /locus_tag="ACFM72_001442"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HFC6257997.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKAENLPEILLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSMYCTAADYFH
                     KKYGMSATHSAVVAAQDTVPAGRALDMGCGQGRNALFLGLKGFDVTAADHNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGSMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            2162..2599
                     /gene="rnhA"
                     /locus_tag="ACFM72_001443"
     CDS             2162..2599
                     /gene="rnhA"
                     /locus_tag="ACFM72_001443"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HFC6257998.1"
                     /translation="MDQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTASKQPVKNDD
                     LWKELDALVGRHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            3206..3610
                     /locus_tag="ACFM72_001444"
     CDS             3206..3610
                     /locus_tag="ACFM72_001444"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HFC6257999.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
     gene            3650..4837
                     /locus_tag="ACFM72_001445"
     CDS             3650..4837
                     /locus_tag="ACFM72_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HFC6258000.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTAPASNNAPSAPSHPVA
                     KARTVYPKPPRHSNSADNLLRIVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRR
                     FQRFAGTDAQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHG
                     TLFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTV
                     DVPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLN
                     TLYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHI
                     ADKITFPLGAHARIRMNGNGGYAVAFGGYPTLDASALTLDTLLPPPDLPFFPESGVAD
                     ISE"
     gene            complement(4900..5433)
                     /locus_tag="ACFM72_001446"
     CDS             complement(4900..5433)
                     /locus_tag="ACFM72_001446"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HFC6258001.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5612..7867)
                     /locus_tag="ACFM72_001447"
                     /pseudo
     CDS             complement(5612..7867)
                     /locus_tag="ACFM72_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
BASE COUNT         1970 a         2244 c         1963 g         1690 t
ORIGIN      
        1 ttcgtaggaa tgacggaatt ttaggtttct gtttttgtgg aaatgacgaa taaagcgtgc
       61 cggtttatgc tcgccgcaac acgcggttca gacggcattg ctctcttttt tcattatcag
      121 tgggtgtagc aactgtattt ttcaccccgt cgggcaaaaa tacagttgct acgatgcacc
      181 ccgccgccct gccctgtgcc ttgtcctgca atacggcata taatgcacca caaacccccg
      241 cgctgcggtt ttcagacggc atcgccgtgc ttttttacag gcattagccc tttttatcgg
      301 acgcaatatt aaggaggaac aaatgaaaag ctcttttgtg caaacgctta ccatcgccgg
      361 ttcggattcg ggcggcggtg cgggcattca ggcggatttg aaaacatttc agatgcgcgg
      421 cgtgttcgga acgtgcgtca tcaccgccgt taccgcgcaa aataccttgg gcgtgtcggc
      481 ggttcatctc gtcccgaccg aaaccatcac cgcacaaatc caagcaatca gggaagactt
      541 cgacatccgc gcctacaaaa taggaatgct cggcacggcg gaaatcatcg aatgcgttgc
      601 cgacaagctg aaacactgcg acttcggcag gcgcgtactc gaccctgtga tgattgccaa
      661 aggcggtgcg ccgctgttgc aggattccgc cgttgcggca ctgacgcgcc tgctgcttcc
      721 cgatacggat gtattgaccc ccaacctgcc cgaggcggaa gccctgaccg gcgtgcatat
      781 cgaaaaccgt aaagatgcgg aacgtgcggc aaaaatcctg cttgattacg gtgtcaaaaa
      841 tgtcgtcatc aaaggcggac atttgaatgg cagcagcagc ggacgctgca cggattggct
      901 gtttacgcaa aacgaaacgc tggaattgga cagcccgcgc tttccgaccg cccacacgca
      961 cggcacgggc tgcacgtttt ccgcctgcat taccgccgag ttggcaaaag gcttagacgt
     1021 ttgcgaagcc gtacagactg ccaaggccta catcacggcg gcaatctcaa accctttgga
     1081 aatcggcgca ggacacggcc cggtcaatca ttgggcgtat cgggactaac cgtaaaaatg
     1141 ccgtctgaaa caaaatgttc agacggcatt tttgaggatt attcaggctt tttcgccagc
     1201 atcgttacaa atttaaaccg tatcggattg ccgttttcgt ctttggcatg catagaaccc
     1261 aattcttctt tatattcgac cagttcccaa tcccgataat aatccttcag ctcgccctct
     1321 ttaaatttaa aagggaacgg catcggacag gggaaatccg ccgtatccat tgccgatacg
     1381 atcaaattgt atcctcccgc cgccgtatgc gcctgcatat cggcaatcac gtcaggcacg
     1441 cgctgcggca tcaggaacat cagcaccact gttgccacaa tataatcaaa ttcgccctgc
     1501 aaggcggcgg cgttcaaatc atattccagc gtgcggacgt tcaaaccctc cgcctctgcc
     1561 agctccgcca cgtttgccaa cgcggccgga ttgtgatcgg cagcggttac gtcaaaccct
     1621 ttcaagccga ggaacagcgc gttgcgcccc tgtccgcagc ccatatccaa cgccctgccc
     1681 gccggtacgg tatcctgtgc cgccacgacc gcagaatgcg tggcactcat cccgtatttt
     1741 ttgtgaaaat agtctgccgc cgtgcaatac atcgacaaac ggatttcagc atcatccgtt
     1801 ttcggtttga ccgaaaacac ctgctgcggc gcaaacacgc aatcgccgct ttccgccgac
     1861 caaacctctg ccgccccgtc ctgcgtgcgg acttcgacat cgccctgcaa cacattcagg
     1921 cagacccatt cccctccttc ggacgaataa cccgacaaca aaatttccgg caggttttcc
     1981 gccttccata cgggcatctg tccgaaacaa aacaactcgc cgctttgacc cactatccgc
     2041 tccttcatat tcaaaaataa agttgcacat tatatgccta ttttaatccg ccgcaatctt
     2101 tcagacggca cggcgcacaa accgcttata atcacgctgg acaccacaca aaggcacaat
     2161 aatggaccaa accgtttacc tttacaccga cggcgcgtgc aaaggcaatc ccggcgcggg
     2221 cggctggggc gtgttaatgc gctacggtag ccacgaaaaa gaacttttcg gcggcgaagc
     2281 gcaaaccacc aacaaccgca tggaactgac tgccgtcatc gaaggactga aatcgctcaa
     2341 acgccgctgc accgtcatca tctgcaccga ctcgcaatac gtcaaaaatg gcatggaaaa
     2401 ctggatacac ggttggaagc gcaacggctg gaaaaccgcc tccaaacagc ccgtcaaaaa
     2461 cgacgacttg tggaaagaac tcgacgctct agtcggacgg catcaagtca gttggacttg
     2521 ggtgaaagga cacgcgggac acgccgaaaa cgaacgcgcc gacgatttgg caaaccgtgg
     2581 cgcagcgcag ttttcctgac tgccgctccg gcaaaaatgc cgtctgaaac cgctaatggg
     2641 cttcagacgg catcgtcctc caccgtcatt cccgcgcaag cgggaatcca aaccgtcggg
     2701 caacggcaat attcaaagat tatctgaaag tttgaagttc tagattcccg ttttcacagg
     2761 aatgacgaaa agttgcaaga atgacggagt ttcaggcggc atccgaccgc cccgtcattc
     2821 ccgcgaaagc gggaatctaa aaacccaacg ctgcaagatt tatcagaaac aactgaaacc
     2881 gaacggactg gattcccgcc tgcgcgggaa tgacgggatt ttagtaaccg tagcaaccgc
     2941 ctgcgcgacg gctaaggggc ttcagcaacc gtagcaactg cctgtgtggg aatgacggac
     3001 aatgggcttc agacggcatc tcttgcctgc cgctaaaaca gtttgccgca caactgttca
     3061 aacgcgtccg atatgtttca acacacagga cgacacatag agcaccgccc tatgaagtgg
     3121 tacaattaac ggcaatgcgg acagacagat tgaaatatta aaaattaccc taccgttttt
     3181 taaacacttt caggaataag gaaaaatgac cgcccaaccc tgccccatct gcacggcaca
     3241 agatgaagat attttgctgc aaacccccaa gctgcgcgtc atcgccgtcc ataacgacag
     3301 cggttcgcct gcattctgcc gcgtcatttg gcgtaagcat attgccgaaa tgaccgacct
     3361 ttcggcagcg gaacgcggcg aattgatgga aatggtgtac aaagtcgaag ccgctatgcg
     3421 ccaagtgttc cggccggcaa aaatcaacct cgccagcttg ggcaatgtcg tgccgcacct
     3481 gcactggcat attatcgccc gctttgaaaa cgatgcgtcc ttccccgcgc cgatttgggc
     3541 aaaccccgtc cgaaaacacg gtatgaccct gccgcaagat tggacggaac agcttaaaaa
     3601 gctgctttaa gcccgccaat gccgtctgaa accgtatgaa agggaaatta tgaccgaacc
     3661 gacctcccgc cgccgtttcc tgaaaacctg caccgccgcc gccggcgcgg ggctgcttca
     3721 ggcttgcggt actgcgcctg cttcaaacaa tgccccatcc gcgccctctc atcctgttgc
     3781 gaaagcccga accgtgtacc ccaaaccacc acgccattcc aactctgccg acaatcttct
     3841 gcgtattgtc gcttcgtcag gatttgccga agacaccaac cgcgtcaaca cagccttaac
     3901 ccgcctttac aatgccggtt ttaccgtaac caaccaacag gcgggcagcc gccgtttcca
     3961 acggtttgcc ggtacggacg cacaacgtgc cgccgatttc caagaggtcg cttccggccg
     4021 cgtcgccacg cctaaagtgc tgatgggctt gcgcggcggt tacggtgcgg cgcggattct
     4081 gccgcatatc gattttgctt cgctcggcgc aaggatgcgc gaacacggca cgctcttttt
     4141 cggattcagc gacgtatgcg ccgtccagct ggcattgttg gcaaaaggca atatgatgag
     4201 ttttgccggc ccgatggctt atagcgattt tggcaaaccc gcccccggtg cgtttacgat
     4261 ggatgccttt atcaagggtg caacccaaaa ccgcctgacc gttgatgttc cttatatcca
     4321 acgcgccgat gtcgaaaccg aaggcatatt gtggggcggc aacttaagcg tcctcgcctc
     4381 gctcgccggc acgccttata tgcccgacat cgacggcggc attttgttcc tcgaagatgt
     4441 cggcgaacag ccctaccgca tcgaacgtat gctcaatacg ctgtatcttt cgggtatttt
     4501 gaagaaacag cgcgccatcg tgttcggcaa tttccgtatg gaaaaaattc gagatgtcta
     4561 tgatccgtct tatgattttt ctgccgttgc caaccatgtt tcgcgcacgg cgaaaatccc
     4621 cgtgctgacg ggcttcccgt tcggacacat tgccgacaaa atcactttcc ctctaggcgc
     4681 gcacgcccga atccgtatga atggaaacgg cggttatgcg gtcgcgtttg gaggctaccc
     4741 gacactcgat gcgtccgccc tgactttgga taccctgctc ccaccgccgg atttgccctt
     4801 cttccccgaa agcggtgttg ccgatatctc ggaataaacc cgcaaacgga caaatgccgt
     4861 ctgaagcctt cagacggcat ttcccaagac ggcggcagat tacagcaatg cccgaatatc
     4921 ggcttcgatt tcttcgggcg taacactagg cgcaaaacgc tcgaccactt cgccgtcgcg
     4981 gttgacgagg aatttggtaa agttccattt gatgtcgcct tcgtcgcgct tctctcccaa
     5041 agctgcgagc ttcaacacga aatctttaaa cagatgattg cctttatctt gcggtttgac
     5101 ggatttcagg taggcataca agggcgcggt atttgctcca ttgacttcga ttttgtcgaa
     5161 aatcttaaac ttcgtgccaa acttcatcat acacacttgg gcaatttctc cgctgctttc
     5221 gggagcctgt tcgcggaact ggttgcacgg aaaatccaaa atctccaagc cttctgcggt
     5281 atattgtgca tacagcttct gcaaagcctc gtattgcggg gtcagaccgc aacgcgttgc
     5341 cgtgttgaca atcagcagaa ccttgccgcg atagcctgac aaatcaaccg cattgccttc
     5401 tgcatctttc atttgaaaat cgtaaatacc catttttatc cttatctgat gtaaaccgat
     5461 gccatctgaa acgtgcttca gacggcatga aagcagcaat tgtatagccg attaaaataa
     5521 aaaatccaca tccttttcca ttcccgtccc aatccgcaat aaaaaactgc acccgaaaac
     5581 gggtgcagtt gctcatttca taccgcaaaa cttatttgtc gcggccgaat acgattttag
     5641 tggcttggat ggcgacacag attgcaccgc cgataaagat caagtcggcg gcagtacgaa
     5701 cccagcgcag ggtgtcgagg atttccattt gcaggaactc ttcgctgcgt gcataccaca
     5761 ggccgtgcgt gatagaggcg tatgcctgaa tcgcgccgac aggcagcagg ctgatggcaa
     5821 tcataccgac caagccgccg ttgagcagcc agaagcccca agtcatcagt ttgtcgtcaa
     5881 actgcgcgtt cggtttcaaa taacgggcaa ccagcaatac gaagcccaat gccaagaaac
     5941 cgtacacacc aaacaaggcg gcgtgcgcgt gaacggcaga agtgttcaaa ccttggatat
     6001 agaacaggga aatcggcgga ttgatcagga agccgaatac gccggcaccg atcatattcc
     6061 aaaaggcgac tgccacgaag cacatcagcg gccaacgcag gcgtttcgcc cagtcggaca
     6121 ggtgttggta agaccagtgt tcgtatgctt cacggcccag caacaccagc ggcacgactt
     6181 ccaaagcgga gaagcaggca ccgattgcca tagaggcgga ggtagagccg gagaagtaca
     6241 gatggtgcag cgtacccgga acgccgccca acataaagat ggcggcagcg gccaaagtgg
     6301 aggcagtggc ggtactgcgg cggacaaagc ccatattgta gaagacaaag gcaaaggcgg
     6361 cagtggcaaa tacttcaaag aagccttcca cccacaggtg aaccacccac cagcgccagt
     6421 attccattac ggcaatcggg gatttttcgc catagaacag gcccggtgcg tagaatacgc
     6481 ccacaccgac catagaagcg acaaagattg ccagcaggtt tttgtctacg cctttttctt
     6541 tgaaggcgga aaccgtgcag cgcaacatca ggaacagcca caacagcagg ccgaccatca
     6601 gcaggagttg ccagaaacgt cccaaatcga ggtattcgta accttggtgt ccgaaccaga
     6661 aattcaattc ggggggaagg atgtgcgtca acgcaaagaa gttgcccgcg taagagccgc
     6721 cgaccacgat gaagagggcg atatagagga agttcacgcc tgcacgttgg aacttgggat
     6781 ctttgccgcc gttgacaatc ggcgcaagga acaaacctgc cgtcaaaaag ccggttgcaa
     6841 tccagaagat ggcggattgg atgtgccaag tacgggtcag ggcgtaaggg aaccagtcgg
     6901 acatttcaaa gcccaacgcc tcgtcaatgc cgtagaaacc ctgaccttcg acggtgtagt
     6961 gcgcggtcag accgcccagc aatacttgta ccacaaacag ggcgaccgtc aggaagacgt
     7021 atttgcccaa tgctttttgc gaaggggtca gttggatttt ggaaatcggg tcttcagacg
     7081 gcacttccac ttcctcgtgt ttggtcaaga aggaataacc ccacatcagc aaaccgatac
     7141 ccatcaagag cagtacgaca ctggtaaacg accacatata gttttcagtg gtcggcacat
     7201 tgttgatcaa aggctcgtgc ggtcagttgt tggtataggt aaacgtctcg tcaggacggt
     7261 tggtcgaagc agaccaagaa gtccagaaga aaaagtcgaa cagtttttca cgcgcttctt
     7321 ggcttggcaa tgtgttgttt ttcattgcaa agtgttcgcg ggtggtttgc agcgcgggat
     7381 catcgccgta aacaccgtga taataaggca ggatgctttc gatggctttt acacgcgtat
     7441 cgctgatgac cacagaacca tcttctttaa tacggctttg gttgcggtat tcgtcagcca
     7501 gtcgggtttt cagaacggct tgttcttcag gggaaacttc atcgaatttt ttgccgtaag
     7561 tctgttgcgc ggtcaaatcc aaccaggcgg acaactcacg atgcagccag tcggccgtcc
     7621 agtccggagc ctgatatgcg ccgtgaccca gaatcgaacc gacttccatg ccgccggtac
     7681 tctgccacgc agactgacct gccaaaatat cgtctttcgt catcaagact ttgccggatg
     7741 cggaaacgac ctgttcgggg taaggcgggg cttttttgta aacctcgctg cccatatagc
     7801 caagaatggt aaagcatacc gccagaacgg caaacagcaa gtaccacagc ttcttgtact
     7861 gtcccat
//
LOCUS       DAXHRP010000095         7864 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.095, whole genome shotgun sequence.
ACCESSION   DAXHRP010000095 DAXHRP010000000
VERSION     DAXHRP010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7864
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.095"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            41..505
                     /locus_tag="ACFM72_001448"
     CDS             41..505
                     /locus_tag="ACFM72_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFC6258002.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPVASESRSYVVMEEVKENPVLDLD"
     gene            1264..1752
                     /locus_tag="ACFM72_001449"
     CDS             1264..1752
                     /locus_tag="ACFM72_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HFC6258003.1"
                     /translation="MTPLFRKTVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGIALPVWSVAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(1811..2539)
                     /locus_tag="ACFM72_001450"
     CDS             complement(1811..2539)
                     /locus_tag="ACFM72_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HFC6258004.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            2866..4284
                     /locus_tag="ACFM72_001451"
     CDS             2866..4284
                     /locus_tag="ACFM72_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC6258005.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYPYEFHEFHDKG"
     gene            complement(4348..4974)
                     /locus_tag="ACFM72_001452"
     CDS             complement(4348..4974)
                     /locus_tag="ACFM72_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HFC6258006.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYVVMGWMVLAVMKSLTASLPLAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            5117..6457
                     /locus_tag="ACFM72_001453"
     CDS             5117..6457
                     /locus_tag="ACFM72_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HFC6258007.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRAAQEGRLKDQ"
     gene            6531..>7864
                     /locus_tag="ACFM72_001454"
     CDS             6531..>7864
                     /locus_tag="ACFM72_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HFC6258008.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLIDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSG"
BASE COUNT         1741 a         1972 c         2118 g         2033 t
ORIGIN      
        1 tctatttgtt aaaatcaata ataaatacaa ggcaatccaa atgaaagaac tagataaaat
       61 cgatttccgc attcttaaga tcctccaaca gaatgcccgc atcccgatga cggagcttgc
      121 cgagaaggta ggcttgtcca ccacgcccgt tacagagagg gtgcgccgtt tggagcggga
      181 acattatatt tccggctatc acgcccacct caatccccat ctgttgggca aaccgctatt
      241 ggtttttgtc gagctgaagc tgcaatccaa atcgggcaat attttcgaag atttcaaaaa
      301 agaagtgctg aaaattccgc aaattatgga atgccacttg gtgtcgggcg aatacgacta
      361 tctgattaaa gtacgtttgc ccgatatgtc tgcctatcgg gatatgctag gcaatatcct
      421 attgcaactg cctgtcgctt cggagagtag gagttatgtt gtgatggagg aggtcaaaga
      481 aaatccagtt ttggatttgg attgaatatt tcaggctggc tatgcggttt gacacctaaa
      541 tgaaacataa caacatcacg cacagaggct tgttgcttca gataaaaaaa tgcacacatc
      601 cggttgaatg tgtgccaagt ctacaaagga gaaatagagg agaaactatt aactgactac
      661 tcgaaccagc taacggaatg aattatgcag cttttccggt caaaaagcaa gcgtttttct
      721 tgttaaattt cttaaagaat ggaatttcaa acaataaaag taattaaatt tcaaaaaaag
      781 cggagataaa aaaatgcaca catccagttg aatgtgtgcc aagtctacaa aggagaaata
      841 gaggagaaaa atcaagctgc atcaagcaac tcgacggcgg gaattatccg ccgtttctta
      901 tccgctgtca attatttttt gaaaatttac ccgaccgatt caaattttgc aaaaaacttg
      961 cccgatggct atccggtaac aaattccttc aaaaacctgt caatccgctt attcaaaaaa
     1021 atcatatgat ttcattgaaa taaacttttg attcgctaaa tttgctgaaa ttcaaatcct
     1081 ccggatgtat ttttttgtgg gcattgtgcg ggcaaatcgc cgttttgtcc cttgtcaggt
     1141 tttgtgcata tcggggaaaa ccgaaatcgt ccgcacctga gccggtgtcg attcgtccct
     1201 tgccatctcg ggatatatcc agcaaaatcg gcatatcggt attttgattg gtgtgttgag
     1261 aaaatgaccc cgttatttag aaaaaccgtt tggctgctgt ttgccgtttc ggtctgtgca
     1321 tttgccggtt ctttggcggc acagtatgtt ttgggtatgg agccttgcgt tttgtgtatc
     1381 agtcagcggt tatgcgtttt ggcaaccgca ttgtgtacgg caattgtcct gatgtgcaga
     1441 ccaagaagaa gggcaggcgg tttgttcggt gctgtcttta tcagcattcc ggccgttacg
     1501 ggtatttctg ttgcggcata tcagttgtgg ttgcagtcgc tgccgccggg aaccgctcct
     1561 tcgtgcggcg cgccgtggac gttccgcttg aaaggctggc ctttgtttga ttggttcgag
     1621 cctgtcgtgc gcgggttcgg aaattgtgct gaaccggatt atctgctggg aattgctttg
     1681 cctgtttgga gcgtggcgta ttttctggcg gttgtcctga cggtttggtg ggcgtgggca
     1741 agggctaaat aaatcaatgc cgtctgaaag gttcagacgg cattttattg tatgtctgct
     1801 gtgctgcgta tcagtccaaa ttcaatacgg cggaagtgta aacgtcttgc acgtcgtcta
     1861 agtcttccag cgcgtcaatc agtttttgca ttttgacggc atcgtcgccg gagagttcgg
     1921 tttcgttttg ggcgcgcatc gtaacgtcgc cgtcaacaga tttgtaacct gccgcctcca
     1981 aagcggattt tacgcccgcc caatcgtttg gcgcggtaat gacttcgatg gaaccgtcgt
     2041 cgttggtaac cacgtcttcc gcaccggctt ccaaagccgc ttccatcagc gcgtcttcgt
     2101 caacgccggg ttcgaatacc aaatagccct gatgcacgaa gttgaacgcc acgcagccgt
     2161 cagtacccaa gttaccgccg tttttggtaa acgcgtggcg cacgtcggca acggtgcggg
     2221 ttttgttgtc ggtcaggcag tccaccatca aagccgcgcc gccgatgccg tagccttcgt
     2281 agcgcaattc gatgtattcc acgccttcca agttgcccgt acctttgtcg atggcgcgtt
     2341 gcacattgtc tttgggcata ttgttttcgg ctgctttttc caaagccagg cgcaggcgcg
     2401 gatttgcgcc gggatcgccg ccgcccatac gcgccgcaac ggtgatttct ttgattaaac
     2461 gggtgaagat tttgccgcgt ttggcatcct gacgggcttt tttatgctgg atattcgccc
     2521 acttgctatg gcctgccata aatttccttt cttatttcaa ataattaatc tgtttttgtc
     2581 agatttttta cggtcggcat tttaacataa gttgcaagta cccaaaatat cctgttttat
     2641 gccgtgccgt tgtcgatgcc gtctgaaagc gatttcctcc gctttccgct taaaaataaa
     2701 gaaatgtttt aattaacgat attttacggt atgatggcgc agcttctccc cgattgttga
     2761 caatttaagg catctgttgc ggcaaatacg gtctgctcgc cgtgtttcct tattggaatg
     2821 tcttttggaa ggcagtcatt ttaattgtaa gataaggttt attttatgga aaatatattg
     2881 tctgttctgg tgggtacagt caatcggttc ctttgggact acctgctgat ttacgcgctt
     2941 ttgggtatcg gcctgttttt tacgctgtat ctcggtgcgc cgcagattac caagctgggt
     3001 gcgggattca aatctgtatt cggcggcttg tttgccaaag gcgataaaga cgacaagtct
     3061 ttatcgcagt ttcaggcgtt ggcggttgcc atatctgcgc aaatcggtac gggcaacgtc
     3121 gccggcgtgg cgaccgccat caccgcaggc gggccgggcg cgattttttg gatgtgggtt
     3181 tctgccgttt tggggatgtc cacgattttt gcggaggcac tgctggcgca gaaataccgc
     3241 gtcgtcagcc acggcaaata catcggtggg ccggcgtttt atattacgca cggtctgact
     3301 ccgaaaatcg gcaggggcgc ggcgcgtttc ctgtcgggct ttttctccat tgcgttgatt
     3361 atcgcattgg gctttatcgg taatgcgaca caggcaaact ccattgcttc tgccgttacc
     3421 attgcatttg atgtgccttc tttggcagtc ggtattgtgc ttgccgtcct tgcgggcatg
     3481 gttgtgattg gcggcgtgaa ccgtattgcc aatattgccc agtttgtcgt gccgtttatg
     3541 gcggttgttt atattttgtg cgccgtcgtt atcctgtttg aattttccga ctatattgtg
     3601 ccgatgttca accacatctt taccgccgcc ttcaatcctg aagccgtttt gggcggtgcg
     3661 gcgggtatcg gtatgcgcga agcgatacgt ttcggcgtgg cgcgcggtct gttttccaac
     3721 gaagcgggga tgggttctac cccgcacgcc cacgcgactg cggatgtgaa gcatcctgtg
     3781 cagcaaggta tggcggcatt tgtcggtgtg tttatcgata cgattttggt atgtacggca
     3841 actgcattga ttatcctgct gaccgatgcc aacctttcgg gcgaacaggg cgcggcggtt
     3901 actcaatttg cctttaacaa ggcatttccg ggattcggtt cgcaattgct tgccgtgtgt
     3961 ctgaccttct tcgcctttac gaccattatc ggctggtatt atttcggcga gtccaacatc
     4021 cgttttcttt tcaggggaag acacttgggc atctatcgcg cattggttct gcttgccatt
     4081 gttttgggta cgctcggcaa agtcgatttg gtttggagcc tgtcggatat gttcaacggt
     4141 tttatggtta tccccaacct gattgccctg ttcttgctgc gtaaggaaat ccgtgccatt
     4201 tatgatgatt atttggcaca aaaaaaagcg ggtcgggatt tgtcttatcc gtatgaattc
     4261 cacgagttcc acgacaaggg ctgatgtccg gcaaacagaa aacctcccaa tcttcaggat
     4321 cgggaggttt tgcttttcag acggcattca gattacataa ccgtacacac tgacaaattg
     4381 ggtgatgctg ccgcccaata cgaacagatg ccagattccg tgcccgtgtc ggattttttc
     4441 atcgtttaca aaccagtaaa tgccgacgct gtacagcata ccgcctgccg ccagccaagc
     4501 cagtcctgcc agcgggagtg aggctgtcag ggatttcatt accgccaaga ccatccaacc
     4561 catgacgaca taaatcgcaa tagacagcag tcgtttttcg cttttccgtc cgatggtgag
     4621 ttcttgtgcg attcctgcag ccgccagcag ccaggacagt gaaaataccg tccagcccgg
     4681 cccgtttctc aaagaaacca gtgcaaacgg tgtgtagctt ccggcaatca gcacataaat
     4741 catgcagtgg tcggtttttt tcaaaatgct tttcagtttt ccggctgcaa ttccgtggta
     4801 cagcgaggaa ctcaaataga gcagaagaag gctgatgccg taaaccgata cgctgaagat
     4861 acggtagccg tccccgtgtc ctatggtttt cagcagcatc agcgccaaac ctgccgccgc
     4921 cagaatcaaa ccgctcaaat ggctgtaagt attgaagcgt tcgcctgtat acatcgcaca
     4981 atctttcggg aaagtagagg cagtcagttt acgccgatac ttttgcttct gtgtgagatt
     5041 tactctttgc ctacactgtg aatattcttg aaaatgcgtg tgttaaaatc tgttttttat
     5101 tttcagacgg cattttatgt tgaatccatc ccgaaaactg gttgagctga tccgtatttt
     5161 ggacgaaggc ggttttattt tcagcggcga tcccgtgcag gcgacggagg ctttgcgccg
     5221 cgtggacggc agtacggagg aaaaaatcat ccgtcgggcg gagatgatcg acaggaaccg
     5281 tatgctgcgg gagacgttgg aacgtgtgcg tgcggggtcg ttctggttgt gggtggcggc
     5341 ggcgacgttt gcgtttttta ccggtttttc aggcacttat cttctaatgg acaatcaggg
     5401 tctgaatttc tttttggttt tggcgggcgt gttgggcatg aatacgctga tgctggcagt
     5461 atggttggca atgttgttcc tgcgcgtgaa agtggggcgt tttttcagca gtccggcgac
     5521 gtggtttcgg ggcaaagacc ctgtaaatca ggcggtgttg cggctgtatg cggacgagtg
     5581 gcggcaacct tcggtacgtt ggaaaatagg cgcaacgtcg cacagcctgt ggctctgcac
     5641 gctgctcgga atgctggtgt cggtattgtt gctgcttttg gtgcggcaat atacgttcaa
     5701 ctgggaaagc acgctgttgg gcgattcgtc ttcggtacgg ctggtggaaa tgttggcatg
     5761 gctgcctgcg aaactgggtt ttcccgtgcc tgatgcgcgg gcggtcatcg aaggccgtct
     5821 gaacggcaat attgccgatg cgcgggcttg gtcggggctg ctggtcggca gtatcgcctg
     5881 ctacggcatc ctgccgcgcc tcttggcttg ggcggtatgc aaaatccttt tgaaaacaag
     5941 cgaaaacgga ttggatttgg aaaaacccta ttatcaggcg gtcatccgcc gctggcagaa
     6001 caaaatcacc gatgcggata cgcgtcggga aaccgtgtcc gccgtttcgc cgaaaatcgt
     6061 cttgaacgat gcgccgaaat gggcggtcat gctggagacc gaatggcagg acggcgaatg
     6121 gttcgagggc aggctggcgc aggaatggct ggataagggc gttgccgcca atcgggaaca
     6181 ggttgccgcg ctggagacag agctgaagca gaaaccggcg caactgctta tcggcgtgcg
     6241 cgcccaaact gtgcccgacc gcggcgtgtt gcggcagatc gtccgacttt cggaagcggc
     6301 gcagggcggc gcggtggtgc agcttttggc ggaacagggg ctttcagacg acctttcgga
     6361 aaagctggaa cattggcgta acgcgctgac cgaatgcggc gcggcgtggc ttgagcctga
     6421 cagggcggcg caggaaggcc gtttgaaaga ccaataaact cacttgaaat gttctgttaa
     6481 gccgccattc tgaaaaaaga ccgtctgaaa atccattctt caaaaacatc atgaacaaac
     6541 aacccctttc cctcgccgtc gtcggacaca ccaacaccgg caaaacctcg ctcctgcgta
     6601 cccttttgcg cgacagcggt ttcggcgaag tcagaaacgc cccatcgacc acgcgtcatg
     6661 tcgaagaagc cgccatcagc gacggcgcag acacgctggt tttcctgtac gacacgcccg
     6721 gactcgaaga cgcgggcggc gtgctggaat ggctggaaaa ccatacggac aatcgttcag
     6781 acggcatcga acggctgcaa cagtttctcg gcagccacgg cgcgcaccat gatttcaatc
     6841 aggaagccaa agtcttacgg caagtcttgc aaagcgatat ggcaatgtac gtcatcgacg
     6901 cgcgcgaacc cgttctcgac aaatatcggg atgaattgat tatcctttca tggtgcgcca
     6961 aaccggttat gcccgtgttc aactttaccg gcggacagcc tcccgaatcg tggacaacca
     7021 tgctggcgag gagaaacctg cacgttttcg cagggttcga caccgtcgcc tttgattttg
     7081 aaggcgaact acgcctgtgg gaaaacctcg ccaccatgtt gcccgaacgc agcacacttg
     7141 accgcctgac agccatgcgc cggcgcgaat ggcagcggct ggacggcgaa gcgcgccgcg
     7201 aaatcgccga ctttttaatt gatgccgccg ccttcaggca ggaagtggac gaaaacgagg
     7261 ataccgccac cgtgctgcaa accatgcagg cggaaatacg ccaactcgaa cggcagatgc
     7321 agcagcggct gtttgccctc taccgtttct accacagcga aatcgacggc ggcgactgga
     7381 tgccgcaagc cttccgccaa gacccgttcg acagcgaatt gctcaaacaa tacggcatcc
     7441 gcaccggcac gggcgcggca accggcgcac tcatcggctt ggggctggac atcgccacac
     7501 tcggcggctc gctcggattg ggtacggcaa tcggcggctt tttgggcggc atcctgccca
     7561 atacccgcac catttccgac aaactcgccg gccgccaaac cttgcacacc gaccccgaaa
     7621 ccctgaccct gctcgccgcc cgcgccctcg atctgctcca cgtcctgcaa acgcgcggac
     7681 acgcggcaca gtcggatatt gagctgcaca gccgcaaagc cccgtgggac gccgccagac
     7741 tcccgcccga actcaacaaa gcccgcagtc attggaaatg gtcgtcgctc aatacgcacc
     7801 gccccgaaac cagccgcgcc gaacgcgccg gatatgtgga gaaacttcaa atccgcctgt
     7861 cggg
//
LOCUS       DAXHRP010000096         7621 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.096, whole genome shotgun sequence.
ACCESSION   DAXHRP010000096 DAXHRP010000000
VERSION     DAXHRP010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.096"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            341..565
                     /locus_tag="ACFM72_001455"
     CDS             341..565
                     /locus_tag="ACFM72_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HFC6258009.1"
                     /translation="MKVISVLNQKGGSGKTTVATHLARALQLAGNSILLVDSDPQGSS
                     RDWAAVHEEQPVPVIGIDSPTIDRDLKSVV"
     gene            581..985
                     /locus_tag="ACFM72_001456"
     CDS             581..985
                     /locus_tag="ACFM72_001456"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HFC6258010.1"
                     /translation="MDGAPQTADLAISAIKASDLVLIPVQPSPYDIWATADLVNLIKQ
                     RIKLIDGNLKAAFLINRTIKGTKIGGEIRAALEEYELPVLSTVIVQRIIYPTSAITGS
                     TVLDKEPNGEAVKEIQSLANEIINLINIDNHI"
     gene            1028..1231
                     /locus_tag="ACFM72_001457"
     CDS             1028..1231
                     /locus_tag="ACFM72_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HFC6258011.1"
                     /translation="MNGLKADRPSANKANLSIDDVIKQEEIKRISFDMSESLHRELKK
                     YAAENGVTIRVVLNKLVSDLLNK"
     gene            1407..2570
                     /locus_tag="ACFM72_001458"
     CDS             1407..2570
                     /locus_tag="ACFM72_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC6258012.1"
                     /translation="MHINFSMEYKEFNENYLYKKPFIFKNALDVSSISWKEINELYQR
                     ADPTDWQFKFRKGEIIPKEAYVESFNDVGRIRHRFNKTAVYQYLQDGATMVYNRIDNE
                     PFVDSIAKQIAQFAQAQTVVSGYLAFGSSPSYRNHWDTRDVFAVQLIGKKHWTVSAPN
                     FDMPLYMQQAKDMPHITPPTTVDMEVILEAGDILYIPRGWWHNPMPMNCETFHLAIGT
                     FPPNGYNYMEWLMKKIPDIQSIRQNFIDWEHDQKNIDNAAQAVTEMMKNQENYQAFIQ
                     DFLGNQRVNTAFNMQIFGNLDNDRLPENSTIKLNSLDNRTIKQGYIIANGIKTNLDND
                     SQTILQWIADKHSVKLTQLYEFCQNQNINLEKVEKLVFDLTMIDVLECLTDER"
     gene            2577..2783
                     /locus_tag="ACFM72_001459"
     CDS             2577..2783
                     /locus_tag="ACFM72_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258013.1"
                     /translation="MFTFLNKNIFIKTIVLGCFYSFLFFSFFVSGKSFGYSFEIFNMD
                     TSALAFLSVFMGFFISVAVHIYDI"
     gene            2807..3142
                     /locus_tag="ACFM72_001460"
     CDS             2807..3142
                     /locus_tag="ACFM72_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HFC6258014.1"
                     /translation="MKELTINDLTLVSGGFEFGRDYIEIAPVVGTAGGVASSVRAASM
                     TGEAGAILTRSGVTGLRAGVVAIPLLAYNGTVWVNRNTKLQDNLGRLIDKVTGLDQSG
                     NDYGDGTSY"
     gene            3177..5273
                     /locus_tag="ACFM72_001461"
     CDS             3177..5273
                     /locus_tag="ACFM72_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HFC6258015.1"
                     /translation="MSIYLSRLSFGFSRRLLVVLQTEAAECGLACLVSVLGFHGFYTD
                     LRHLRARFSLSLKGATLADLVRFANSMNLTARAVRLDLDELVNLRLPCILHWDLNHFV
                     VLHEVHRNHIVIMNPASGWQKVRMEEVSRCFTGVALELFPNTQFEEKHETRKIRVLPM
                     LRGVVGLKRSLFQLLLLAAVLQVFALASPFFMQWVIDHAIVSADRDLLMTLALCFGLL
                     MIVRQLVSLLQTWAGMYLSTSLNIQWKANVLRRLMDLPVSYFAKRHLGDVVSRFGSVD
                     SIQSTLTSTFFVLVLNSIMAVFTLGLMYLYSPSLTTVVLVVLLIYIGIRWVAYYPLRH
                     ATQENIVHAAKQSSYFMETIRGIQTVKLFDKNAQRHAAWLNLFIDTINTGLMTQKLSA
                     LFGFTNGLLFGIANILIVYFGAVSVLNGGFTVGALMAFMSYKSQFESKAGSLIDQFVQ
                     IKMLGLHAERLADIVLEETENEQNNDFSLPKNLEHFDIQIENVSFSYAENEPYILQNF
                     SLIIKQGTAIAFAGHSGCGKSTLIQILTGSLKPESGHVLLGGHDIHALPPAFIRTWSA
                     SVMQNDVLFTGSIAENISFFDDTPNMEKIAFCAQMANIHHEIVAMPMAYETLIGDMGS
                     ALSGGQKQRIVLARALYREPKILFLDEASSHLDINNERVINDNLRQLNITKIMVAHRQ
                     ETLNTADSVVYLDKVA"
     gene            5275..6537
                     /locus_tag="ACFM72_001462"
     CDS             5275..6537
                     /locus_tag="ACFM72_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFC6258016.1"
                     /translation="MTLFRPEVFQAKKNRWTGQIVLVRPFSLQFLTFFAVSLAAILVA
                     FLIFGSYTNKTTVTGQLLPTTGVVRVYSQDMGVIAHQHVMNGDFVKKGDVLFTLSTSR
                     NDNNGSIQARLLAEAELKKSLSEQEIIMKKRVHAAEKTAQENTVHRFQNQMQHVRNQI
                     IMQEKRIAISEKMLEKQRYLAKMDAISELEKNSYEIALLELKAGLAAYQREADNLARE
                     ITVQQSNLKNLPEQQATEISQLERAVSVYQQEILDYQQRNEQTIRATISGYVSSINTE
                     IGQQVDTNKLLMSIVPKESELLANLYVPSRAIGFVKPNDKVILRYQAYPYQKFGHAEG
                     HVISIAQTALGAQEWTNLGNIFTQTAQVNEPVYLIKVKLDNQHIRIYGTEKKLQIGMI
                     LEADILHENKRLYEWILDPLYQVMGKIS"
     gene            complement(6807..>7621)
                     /locus_tag="ACFM72_001463"
     CDS             complement(6807..>7621)
                     /locus_tag="ACFM72_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258017.1"
                     /translation="CEFWDKINYNRAAQAAEQRAKQAQETPKEPPKQEEHFIAKLPND
                     KLMTIYRLFQKQLDDMRGLERDIERGDWYINARYRMNENRNKIRALEDDNKRLHHDYW
                     AVQDQGENRFFGMGKIGAKLVKENEKQQHINERHGANVREIRRLKTENEKLEGQYSDK
                     LAADVVKVRDRFNEELDNVRREIGKRPMEEFRNVFLQAAQEAQTTIGQKAVQIELEKF
                     PLNGSPSAKRIAFYFGAQRIREVEQKEREDQRKEQERQARRMERDDGHGIGM"
BASE COUNT         2302 a         1346 c         1564 g         2409 t
ORIGIN      
        1 gcccggatgc ctgattatgg ggcgtccggg gaggattaag ggggcatttg ggtaaaatca
       61 ggagtaatta ggagcggaaa tagacgaaaa cctgtgtttg ggtttcggct gttgggggaa
      121 gggctttttt gcaaaggtct caatttaaac tttaacgcaa tatcaactca ttttctgcca
      181 catatctcaa aaaagtctag tttgatacag taatctcttt aacagctttt cttgctaaaa
      241 tttaaaacaa aatgtaaata ttcttttatt tatttaaata atagattaaa atattattta
      301 attaaaagca taatgagcgt agatattcaa aggagctaac atgaaagtta tttccgtatt
      361 aaatcaaaag ggtggaagtg gtaaaaccac agtcgcaact cacttggcac gcgccttgca
      421 attagcagga aatagcatct tattggttga tagcgatcca caaggaagca gtagggactg
      481 ggctgctgtt cacgaagagc aacctgttcc tgtgattggt attgacagcc cgacaattga
      541 tcgtgattta aaaagcgttg tttaaaaaga ttttgttatt attgatggcg caccacaaac
      601 agccgattta gccatatcag cgattaaagc ctctgattta gttttaatcc ctgttcaacc
      661 gtcgccatac gatatttggg caaccgctga tttggttaat ttaatcaagc agcggataaa
      721 actcatagat ggaaatttaa aggctgcttt tttaattaac cgaactatta aaggaacaaa
      781 gattggcgga gaaattagag cagcgttaga agaatatgag ttacctgttt tatcaaccgt
      841 gattgtgcaa cgtattattt atccaacatc tgctatcaca ggtagcactg tactggataa
      901 agaaccaaat ggagaagcag ttaaggaaat tcaatcactt gcgaatgaga taataaattt
      961 gataaatata gataatcata tttaatgaaa tattatttta aatttttaaa tattgtagga
     1021 aataattatg aacggattaa aagcagatcg tcctagtgca aacaaagcaa acttatctat
     1081 tgatgatgtg atcaagcaag aagaaatcaa gagaatcagt tttgatatgt ctgaatctct
     1141 gcatagagaa ttgaagaaat acgcggctga gaatggtgta actattcgcg tcgtgctcaa
     1201 taaactcgtt tcagatttat tgaataaata ataacacacg gcagaatgta tttgaccata
     1261 atgtcaaagc aatatccaac tttatctaaa aataacaaaa taccttcttc caaaaacaga
     1321 acgtcttttc attgcaaaac ttgacatata aacactagtt aagtaaactt aattttcatt
     1381 attaataatg aaaataagga ttatttttgc atattaactt ttcaatggaa tataaagaat
     1441 ttaatgaaaa ttatttatat aaaaagccat ttatttttaa aaatgcttta gatgttagtt
     1501 ctatctcatg gaaagaaatt aatgagttgt atcaacgtgc agaccctact gattggcaat
     1561 ttaaatttcg caaaggggaa ataatcccca aagaagccta tgttgaatca ttcaatgatg
     1621 tgggtagaat acgtcatcgg tttaataaaa cagccgtata tcagtatctg caagatggtg
     1681 caacaatggt ttataaccgt attgataatg agccatttgt tgacagtatt gctaaacaaa
     1741 ttgcccagtt tgctcaagca caaactgttg ttagtggtta tttggcgttt ggtagttctc
     1801 catcatatcg taatcattgg gatactcgtg atgtgtttgc ggttcaattg attggcaaaa
     1861 aacactggac agtttctgct ccaaattttg atatgccatt gtatatgcag caagcaaaag
     1921 atatgccgca cattactccg cctacaacag tagatatgga agtcatttta gaagcaggag
     1981 atattttata tatcccgcgt ggttggtggc ataatcctat gcctatgaat tgtgaaacat
     2041 tccatttagc tattggaact tttccgccaa atggttataa ttatatggaa tggttgatga
     2101 aaaaaatacc tgatatccag agtattcgtc aaaatttcat agactgggaa cacgaccaaa
     2161 aaaatataga taatgcggct caggcagtta ctgaaatgat gaagaaccaa gaaaattatc
     2221 aagcattcat acaagatttt ttgggaaatc aacgcgtaaa tactgcattt aatatgcaaa
     2281 tttttggaaa tctggataat gacagattac ctgaaaatag tacaattaaa ctcaattcgt
     2341 tggataaccg tacaattaaa caaggatata tcatagcgaa tggcatcaaa accaacttgg
     2401 acaatgatag ccaaacgatt ttgcaatgga ttgctgacaa acatagtgtt aagttaactc
     2461 aactgtatga attttgccaa aatcaaaaca ttaatttgga aaaagtggaa aaattagtgt
     2521 ttgatttgac aatgatcgat gtattggaat gtttaactga tgaaagataa attattatgt
     2581 ttactttttt aaataaaaat atatttatca aaacaattgt acttggctgt ttttattcct
     2641 ttttattttt tagttttttt gtatctggta agtcatttgg ttattcattt gaaattttta
     2701 atatggatac aagtgcgctt gcttttttaa gtgtatttat gggctttttt ataagcgtgg
     2761 ctgtgcatat ttacgatatt taatacaatt gaaaagataa ataattatga aagaattaac
     2821 tattaatgat ttaaccctag tttcgggtgg atttgaattt ggtcgtgatt atattgaaat
     2881 agctccagtt gtaggtacag caggtggcgt tgcctcttct gtgagagcag cttcaatgac
     2941 tggagaagct ggagcaattc ttactcgttc aggagtaaca ggattacgtg ctggagtggt
     3001 agctattcca ttgttagcct acaatggtac tgtatgggtt aatagaaata ccaaattaca
     3061 agataattta ggtagattaa tagataaagt aactggcctg gatcaatcag gcaatgatta
     3121 tggcgatggg acaagttatt aatctcataa tactttaaaa tcaaaaaaga acaccaatgt
     3181 caatatatct atctcgccta tcattcggct tttctcgccg tttactagtt gtcttgcaaa
     3241 cggaagcagc agaatgtgga ttggcgtgtt tggtatcggt attggggttt catggttttt
     3301 atacggattt gcgccattta agggcgcgtt tttctttgtc tcttaaaggc gcaacattgg
     3361 cagatttggt acggtttgct aatagcatga atttaactgc tcgagctgtt cggttggatt
     3421 tagatgaatt ggtaaatttg cgcttaccct gtattttaca ttgggattta aatcattttg
     3481 tggtgttgca tgaagttcat cgtaatcaca ttgtgattat gaaccctgct tcgggttggc
     3541 aaaaagtgcg tatggaagaa gtctcgcgct gttttacagg tgtagcgttg gaactatttc
     3601 ctaacacgca atttgaagag aaacacgaaa cgcgtaaaat tcgcgtacta ccgatgttgc
     3661 gcggagtggt gggattaaaa aggtctttat ttcagcttct gctgctggcg gcagtattac
     3721 aggtgtttgc tttggcaagc ccttttttta tgcaatgggt aatagaccat gccattgtat
     3781 cggcagaccg tgatttattg atgacattgg cattgtgttt tggcttgttg atgattgtgc
     3841 ggcagttagt gtcattgttg caaacttggg cgggtatgta cttatctacc tctttgaata
     3901 ttcaatggaa agctaatgta ttacgccgct taatggattt gcctgtttct tatttcgcta
     3961 aacgacattt gggcgatgtg gtttcacgtt ttggctcagt ggacagtatt caaagtacgc
     4021 tcacttctac tttctttgtg ttggtgctca acagcattat ggcggtattt acattagggt
     4081 tgatgtattt gtatagccca agtttaacga cagttgtact ggttgttttg ctgatttata
     4141 ttggtattcg ttgggtggca tattatccat tacgccatgc aactcaagaa aatattgttc
     4201 atgctgccaa gcagagcagt tatttcatgg aaaccatacg tggtattcaa actgttaaat
     4261 tatttgataa aaatgcacaa cgccatgcgg cttggctgaa cttgtttatt gacacgatta
     4321 acacaggttt aatgacacaa aaactttccg cgctgttcgg ttttacgaat ggccttttgt
     4381 ttggtatcgc taatatttta attgtgtatt ttggtgcggt ttctgtattg aacggtggtt
     4441 ttaccgttgg ggcgttaatg gcgtttatgt cctacaaaag tcagtttgag agtaaagcag
     4501 gttcattgat tgaccagttt gtacaaatca aaatgctagg attacacgcg gaacgcttgg
     4561 cggatattgt gctagaagaa acggaaaatg aacaaaacaa cgatttcagt ctgcctaaaa
     4621 atttagaaca ttttgatatt caaatagaaa atgtatcatt tagctatgct gaaaatgaac
     4681 catacatttt gcaaaatttc agtttaatca tcaaacaagg aacagccatt gcgtttgctg
     4741 gacattcagg ctgtgggaaa tctacgctca ttcaaattct gacaggcagt ctgaaacctg
     4801 aaagcggtca tgtgttatta ggtgggcatg acattcatgc gttaccacct gcatttatcc
     4861 gcacatggag cgcaagtgtg atgcaaaatg atgtgttatt tactggctca atcgcagaaa
     4921 acatcagttt ttttgatgat acgcccaata tggaaaaaat cgcattttgc gctcaaatgg
     4981 cgaatattca tcatgaaatt gtcgctatgc ctatggcgta tgaaacattg attggcgaca
     5041 tggggagtgc attgagtggt gggcaaaagc agcgcatcgt actagctcgt gctttatatc
     5101 gtgaaccaaa aattttgttt ttagatgaag ccagtagcca tttggacatc aacaatgaac
     5161 gtgtgattaa cgataatcta cgccaactca acattaccaa aatcatggtc gcgcatcgtc
     5221 aggaaacttt aaatactgct gatagcgtag tttatttaga caaggtagcc tgaaatgaca
     5281 ttatttcgcc ccgaagtatt ccaagctaaa aaaaatcgct ggacagggca aattgtttta
     5341 gtgcgtcctt tttccttgca gtttttaaca tttttcgcgg tctcattagc ggctatttta
     5401 gttgcttttt taatttttgg gagctatacc aataaaacca ccgtaacagg acaacttttg
     5461 ccgacaacag gggtagtacg cgtatattcg caggatatgg gggttattgc tcatcaacac
     5521 gttatgaatg gcgattttgt gaaaaaaggc gatgtgttat ttacattatc tacttcacga
     5581 aatgacaata atggcagcat acaagcacga ttactcgccg aagctgaatt aaaaaaatca
     5641 ctatcagaac aagaaattat tatgaaaaaa cgtgttcatg cagcagaaaa aaccgcacaa
     5701 gaaaacacgg tacaccgttt tcagaaccaa atgcaacacg ttagaaatca aattatcatg
     5761 caagaaaaac gtattgcgat ttctgaaaaa atgttagaaa aacagcgtta tttagccaaa
     5821 atggacgcaa tttctgaatt agaaaaaaat agttatgaaa ttgctttatt ggagctgaaa
     5881 gcaggtttag ccgcttacca acgagaagca gataatcttg ctcgggaaat aactgtacag
     5941 caaagcaatc taaaaaatct gcctgaacag caagctactg aaatcagtca attagaacgc
     6001 gcagtatctg tctatcaaca agaaatattg gattatcaac aacgtaacga acaaactatt
     6061 cgcgcaacca tatcaggcta tgtcagttct attaacacgg aaattggtca gcaggtagat
     6121 actaacaaac tattgatgag tatcgtgccg aaagaaagtg aattactggc taatttatat
     6181 gtccctagtc gcgcaatcgg ttttgtaaaa ccaaatgaca aggtaatttt gcgttatcaa
     6241 gcatatcctt atcaaaaatt cggacacgca gaaggacacg tcatttctat tgctcaaacg
     6301 gcactagggg cgcaagaatg gacaaattta ggcaatattt ttactcaaac agcacaagtg
     6361 aatgagcctg tttatttaat caaagtaaaa ctggataatc agcatattcg tatatatggc
     6421 acggagaaga aattgcaaat tggtatgata ctagaagccg atattttgca tgagaataaa
     6481 cggttatatg aatggatact tgaccctttg tatcaagtaa tgggaaaaat atcatagctg
     6541 aattgctcaa tacattggag cgtatgagtg cccctaatta tcaagcaaaa ccaatgtccg
     6601 atgacttcca atttgttgtt aagcacaaat acacagtgtt ttatgtaata atgaagacag
     6661 agaagtgata caatttttcg ctccattttt gcttcctgaa ttgctgcaat tgtatctgcg
     6721 ttgtatgcga gaagtaaata ttttcgatgc atttgctgac tttgtaccat aatacgtctt
     6781 ccaaccagta tgataggctg gtttttctac atgccgatgc cgtggccgtc gtcccgctcc
     6841 atacgccgcg cctgccgctc ctgctctttg cgctggtctt cccgctcctt ctgctctact
     6901 tcccttatcc gctgcgcgcc gaaataaaac gcgattcgct tggccgaagg gctgccgttc
     6961 agggggaatt tttccagttc gatttgaacc gccttctgcc ctattgtcgt ctgtgcttct
     7021 tgggctgcct gcaaaaatac gttcctgaat tcttccatcg gccgtttgcc gatttccctg
     7081 cggacattgt ccagttcttc gttaaacctg tcgcgtactt tgaccacgtc ggcggccaac
     7141 ttgtcgctat actgcccttc cagtttttcg ttttctgttt tcagccgccg gatttctcgc
     7201 acgttcgctc catgccgttc gttgatgtgt tgctgcttct cgttttcctt aaccagtttt
     7261 gcgccgattt tacccatgcc gaaaaagcgg ttttcgcctt ggtcttggac tgcccaatag
     7321 tcgtgatgca gccgtttgtt gtcgtcttcc agcgccctta ttttgtttcg gttttcgttc
     7381 atgcggtatc gcgcattgat gtaccaatct ccgcgttcta tatcgcgctc caagccgcgc
     7441 atgtcgtcca gttgtttttg aaacagcctg tatatcgtca ttagcttgtc gttcggcagc
     7501 ttggcgataa agtgctcttc ctgtttcggc ggctctttcg gtgtttcctg cgcctgcttt
     7561 gcccgctgct cggcggcttg ggcagcccga ttataattaa ttttatccca gaattcacaa
     7621 t
//
LOCUS       DAXHRP010000097         7602 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.097, whole genome shotgun sequence.
ACCESSION   DAXHRP010000097 DAXHRP010000000
VERSION     DAXHRP010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7602
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.097"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..419
                     /locus_tag="ACFM72_001464"
     CDS             <1..419
                     /locus_tag="ACFM72_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFC6258018.1"
                     /translation="EAEWAGSLFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKA
                     AAAGHGILYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHG
                     NLGWLLFAAVAGHVAMVVTHRVQGRDVLCRMTGRVR"
     gene            complement(444..1319)
                     /gene="rsmI"
                     /locus_tag="ACFM72_001465"
     CDS             complement(444..1319)
                     /gene="rsmI"
                     /locus_tag="ACFM72_001465"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HFC6258019.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLILYPAQDEKHEGLSESAQNVMKILAAELPTKQAAELAAKITGE
                     GKKALYDLAVSWKNK"
     gene            1365..1712
                     /locus_tag="ACFM72_001466"
     CDS             1365..1712
                     /locus_tag="ACFM72_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HFC6258020.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQLNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1717..2310
                     /locus_tag="ACFM72_001467"
     CDS             1717..2310
                     /locus_tag="ACFM72_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HFC6258021.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHIF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2374..2982
                     /locus_tag="ACFM72_001468"
     CDS             2374..2982
                     /locus_tag="ACFM72_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HFC6258022.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            2990..3640
                     /locus_tag="ACFM72_001469"
     CDS             2990..3640
                     /locus_tag="ACFM72_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258023.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3680..4459
                     /gene="map"
                     /locus_tag="ACFM72_001470"
     CDS             3680..4459
                     /gene="map"
                     /locus_tag="ACFM72_001470"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HFC6258024.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4614..4913
                     /locus_tag="ACFM72_001471"
     CDS             4614..4913
                     /locus_tag="ACFM72_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC6258025.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5151..5525
                     /locus_tag="ACFM72_001472"
     CDS             5151..5525
                     /locus_tag="ACFM72_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC6258026.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5712..7178)
                     /locus_tag="ACFM72_001473"
     CDS             complement(5712..7178)
                     /locus_tag="ACFM72_001473"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC6258027.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1976 a         2298 c         1852 g         1476 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggccacg gcattctgta tctgctcatg cttgctgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaagtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgc cggacacgtc gccatggtcg
      361 tcacccaccg tgttcagggt agagatgttc tgtgccgcat gacggggcgt gtccgctgat
      421 tccgttcgca ctatggtgcc gcactatttg tttttccacg acactgccaa atcgtacaaa
      481 gcctttttgc cctcacctgt aatcttggcg gcaagctcgg cagcctgttt ggtcggcagt
      541 tcggcagcaa ggattttcat cacattttgc gcggactcgg acaagccttc gtgtttttca
      601 tcctgcgccg gatacagtat caacaccatc tcgccgcgcg attggttgcc gtcggcagcc
      661 aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt tttcgtgatt
      721 tcgcgcgcca gcatcagacg gcgttcgggg aacagttccg ccatatcggc aagcgtcgcc
      781 ccgatgcggt gcggcgtttc aaacataacg ataggaaacg ccgcccgcac ccatttggca
      841 aacaatttcc tacgttcgcc cgatttcggc ggtacaaaac cgttgaaata aaaatcggat
      901 cccgccacac cagccacact caaagccgcc atcaccgcgc ttgcgccgac aacagggaca
      961 actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc gcacacggcc
     1021 ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata gccgacaatc
     1081 ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga cgagtttgcc ctgaatgccg
     1141 tacgcgctca aaagctgcgc ggtaacgcgc gtgtcttcgg cacagatgat gtccgccttt
     1201 tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg cgtggcaacc
     1261 acgtataatg tccctccgac gacgctgtcg gaggctttct gcaaatgttt ctgaaacata
     1321 agaatgccgc ctgaaaaaca aacattataa aggttaaacc gattatgcgc ctaaaccaca
     1381 aacagggcga ggcaggcgaa gatgccgcgc ttgccttcct ccaatcccaa ggctgcacgc
     1441 tgcttgcccg caactggcac tgcgcctacg gcgaaatcga cctgattgtc aaaaacggcg
     1501 gcatgattct gtttgttgaa gtaaaatacc gcaaaaatcg gcaattcggc ggtgtcgcat
     1561 acagcatttc cccatccaaa ttattgaaac tgcaacgaag tgtagagtat tatctgcaac
     1621 tgaacaggct gacaaacgta ccgtgccgtc tcgacgcggt actcatcgaa ggcagccgcc
     1681 cgcccgagtg gatacagaat attacaggtt gacgatatga cgacattaca agaacgcgtt
     1741 gccgcccatt ttgccgaaag catccgtgcc aaacaggaag ccgaaaaagt actggtcgag
     1801 ccgaccgtac aggctgccga gctgatgctg caatgcctga tgaatgacgg caaaatcctg
     1861 gcctgcggaa acggcggttc ggctgccgac gcgcaacact tcgccgccga aatgaccggt
     1921 cgttttgaaa aagaacgcat ggaactcgcc gccgtcgcgc tgacaacaga cacttccgcg
     1981 ctgaccgcca tcggcaacga ctacggtttc gaccatatat tcagcaaaca agtgcgcgcg
     2041 ctcggacgcg ccggcgacgt cctcgtcggc atttccacct ccggcaactc cgccaacgtc
     2101 atcgaagcca ttaaagcggc acacgaacgc gatatgcacg tcatcgccct gaccggccgc
     2161 gacggcggca aaatcgccgc catactcaaa gacaccgacg ttttgctcaa cgtcccccat
     2221 ccgcgcaccg cccgcattca ggaaaaccac atcctgctga tacacgccat atgcgactgt
     2281 atcgactccg tactgctgga aggaatgtaa cccttttcag acggcatggc gcaaagcaat
     2341 gccgtctgaa acgcccaaga aaggaagccc ccgatgaaac ccaaaccgca caccgtccgc
     2401 accctgattg ccgccatttt cagccttgcc cttagcggct gcgtcagcgc agtaatcgga
     2461 agcgccgccg tcggcgcgaa atccgccgtc gaccgccgaa ccaccggcgc gcaaaccgac
     2521 gacaacgtta tggcgttgcg tatcgaaacc accgcccgct cctatctgcg ccaaaacaac
     2581 caaaccaaag gctacacgcc ccaaatctcc gttgtcggct acaaccgcca cctgctgctg
     2641 ctcggacaag tcgccaccga aggcgagaaa cagttcgtcg gtcagattgc acgttccgaa
     2701 caggccgccg aaggcgtgta caactacatt accgtcgcct ccctgccgcg cactgccggc
     2761 gacatcgccg gcgacacttg gaacacatcc aaagtccgcg ccacgctgtt gggcatcagc
     2821 cccgccacac aggcgcgcgt caaaatcgtt acctacggca acgtaaccta cgttatgggc
     2881 atcctcaccc ccgaagaaca ggcgcagatt acccaaaaag tcagcaccac cgtcggcgta
     2941 caaaaagtca tcaccctcta ccaaaactac gtccaacgct gactcggcaa tgccgtctga
     3001 accgccttca gacggcattg cccgacaccc caaaagcaca atcaaaatgg caaaaaaacc
     3061 gaacaaaccc ttcaggctga cccccaaact cctgatacgc gtcgtattgc tcatctgtat
     3121 caccgccatc ggcgcattgg caataggcat cgtcagcaca ttcaacccga acggcggcaa
     3181 aaccctccaa accgaaccgc aacacaccga cagcccccgc gaaaccgaat tctggctgcc
     3241 aaacggcgta gtcggacaag atgccgccca acccgaacac caccacgccg cctcatccga
     3301 acccgcacag ccggacggca cagacgaaag cggcagcgga ctgccgtccc ctgccgcacc
     3361 caagaaaaac cgggtcaaac cgcaacctgc cgacacagct caaaccgaca ggcagccgga
     3421 cgacgccgga acacaagctg aaaacacact caaagaaacc cccgtactgc ccacaaacgt
     3481 cccccgtccc gaaccccgaa aagaaacacc cgaaaaacag gcgcagccca aagaaacacc
     3541 caaagaaaaa gaaacgccca aagaaaacca taccaaaccg gacaccccga aaaacacgcc
     3601 gcccaaaccc cataaagaaa ttctcgacaa cctcttctga cccggcacgg caggcacacc
     3661 cgcaatccaa ggaagcatta tgaacggcat catcatcaaa acccccgaag aaatcgaaaa
     3721 aatgcgcgag ctgggcaaac tcgtcgccga agccctcgac tacatcggac aattcgtcaa
     3781 acccggcgta accaccgacg aaatcgacaa actcgtttac gactaccacg tcaacgtcca
     3841 aggcggctat cccgcccccc tgcactacgg caacccgccc taccccaaat cctgctgcac
     3901 ctccgtcaac cacgtcatct gccacggcat tcccgacgac aagccgctca aagaaggcga
     3961 cattatcaac atcgacctca ccatcaaaaa agacggcttc cacggcgact ccagccgtat
     4021 gtttaccgtc ggcaaagtct cccccatcgc ccaacgcctg atcgacgtaa cccacgcctc
     4081 catgatggcg ggcatagaag ccgtcaaacc cggcgcgaca ctgggcgacg taggttacgc
     4141 ctgccaacag gttgccgaaa acgccggcta ttccgtcgta caggaattct gcggacacgg
     4201 catcgggcgc ggtttccacg aagccccgca agtgttgcac tacggaaaaa aaggacaggg
     4261 ccccgttcta aaaccgggta tgatttttac cgtcgaaccg atgatcaacc aaggcaaacg
     4321 ccacctgcgt atcctcaacg acggctggac ggtggttacc aaagaccgct ccctctccgc
     4381 ccaatgggaa cacgaagtct tggtgaccga aaccggctac gaaatcctca ccgtcagccc
     4441 cgcctccggc aaaccctgaa accggacgta tccgccccat aaaaacaaac aatgccgtct
     4501 gaaagaaacg gcagatatga tatataatat aaaaacaggc ttgacccggc acattacgaa
     4561 aacaaagcaa atcggaattt gccccgcaac cagacaaact taaaggaagt tttatgaaaa
     4621 tatttgaaaa tatagaagat gttaaagcca tccgtaaaaa gaccgggctg aaccagatag
     4681 acttctgggg caaggtcggc gttacccagt ccggaggatc gcgctacgaa accggccgca
     4741 aaatgcccaa acccgtacgc gaactgctcc gcctcgtcca tatcgaatgc atcgatttgg
     4801 cgaaagtcaa caaaaaagat atggaaatcg ccgccctgtt gaaaaaacac catcccgacc
     4861 tgtatgccga gttgtccaaa cagaccaagt ccgaaagaaa aaaacaaagt taaaccgcaa
     4921 cctccggatg cccgacagtt tttcatttcc gaaaaacgca aacaatgccg tctgaaacac
     4981 tggacaggtc gccgtatccc gcctgccgcc cctgcctcaa accgccgaac cgcccgaacc
     5041 cgccttttta caaactttat ccaatttcct gtttatttca ggatacgccg acattagaat
     5101 gtcaaacagc tcgaaacggg caaactccac atccatccaa aggaataaaa atgaaacttc
     5161 tgaccaccgc aatcctgtct tccgcaatcg cgctcagcag tatggctgct gctgccggca
     5221 cgaacaaccc caccgttgcc aaaaaaaccg tcagctacgt ctgccagcaa ggtaaaaaag
     5281 tcaaagtaac ctacggcttt aacaaacagg gcctgaccac atacgcttcc gccgtcatca
     5341 acggcaaacg tgtgcaaatg cctgtcaatt tggacaaatc cgacaatgtg gaaacattct
     5401 acggcaaaga aggcggttat gttttgggta ccggcgtgat ggatggcaaa tcctaccgca
     5461 aacagcccat tatgattacc gcacctgaca accaaatcgt cttcaaagac tgttccccac
     5521 gttaatcagg caacaaaaaa cagcgttttc agaaatgaaa acgctgtttt ttgaccgttc
     5581 cattattcgc aaaagggaaa aaacgattac ctgccccgtg taccaaaacc tgccctgccg
     5641 gatgaagggc ataaccggca gggacggcgt caacaccata tgggggtacg gcttttcttg
     5701 aaagattcgg cttaaatatc caacactttc gcggtatagg cgataatttc atccgccctt
     5761 tcggggtttt cgttcaactt gatgccgtaa cccggtacca gctctttcag acggccttcc
     5821 caagacgggg cgcgctcggg gaagcattgg tgcatcagcc ggatcatcag cggcacagcg
     5881 gtcgatgcgc ccggcgacgc gcccagcaat gcggcgagtg agccgtcggc gtgggcgaca
     5941 atctccgtac caaactggag cacgccgcct ttttcggagt cttttttaat gatttggacg
     6001 cgttgccctg cggtgatgag ttcccagtcg tcggggtttg cctcggggta gtattccagc
     6061 agggaggcga agcgttcttc tttggtttta cgcaattcgc ccagcaggta tttggtcagc
     6121 ggcatattcg cccagccggc gcacagcata ggatagaggt tgtccatatg gatggacagc
     6181 ggcaaatcca taagcgagcc ttgcttgagg aagttggaac ggaagcctgc gtaagggccg
     6241 aacataaggt ggcgtttgcc gtccacgttg cgtgtgtcga ggtgcgggac ggacatcggc
     6301 ggcgcgccga cggaagcctg cccgtacact ttggcgttgt gttgttcggc ggtttcgggg
     6361 ttgctgttgc ggaagaacag gccggacacg gggaagccgc cgtagccttt gccttcgggg
     6421 atgccggatt tttgcagcag ggtcagcgcg ccgccgcccg cgccgaggaa gaggaagcgg
     6481 gtacggaggg tgagctgccc gtcggggttg cgggtatcgg cggttttgag cacccacgcg
     6541 ccgtcggatt cgcgtttgat gtcttcgacg tggcggttga actcggtttt tacgcccttg
     6601 ccctgcaaat atttcaccat ttggcgcgtc agccgtccga aatcgacatc cgtaccttcg
     6661 gcggagtagt tggcggcgac gggttggttt tcgtcccggc cgcgcatcat cagcggagcc
     6721 caatcggaaa ttttgttccg atcggtggaa aattccatat tttcaaaaag tttttgggtt
     6781 ttaaacgcgt cataacgttt ttgaagataa gaacaatggt cttcattcat caccaaagac
     6841 atatgcggca cggcattgat gaaggaattg tcttccaact tgccttccgc gaccaacgtc
     6901 gcccaaaact ggcggctgac atgaaactgt tcggcaatat tgagggcgcg cgccggatcg
     6961 ataatcccat ttgcacccaa cggcgcatag ttcaattcgc acagcgcgga atgccccgtg
     7021 ccggcgttgt tccacgcgtt tgacgattcc aacgccacat cttccaagcg ttcaatcagg
     7081 gtgatttccc aagacggttc gagttctttg agcaaaacgc ccaaagtcgc gctcataatg
     7141 ccgccgccca ccaagacaac gtctgtcgct tcagccatgg tttactccta aaaaacaggc
     7201 atcttctgcc cttatggtta tttgccgtac tacaaacgcc tgaatcgcaa aagcagggaa
     7261 aaccggcaat ggtgtgtgtc cgagtatgct gtttcggggt tggaatgcgt tgcaagtatg
     7321 gcttccgaca ccgcttcagg ggcttgtaat atgttatcgt gaatgtagtg gattttactg
     7381 ggaaatgcaa agtttttctg tcgcccgcca agtcgggaaa ctgcgaaatg aaaaataaaa
     7441 atagttattt atctatatat atcaaatttt taatagataa aaaatcaaaa ttgtttatat
     7501 attaattttt aaaagattgt cagcatattg cgttaagttt tttatagtgg attaacaaaa
     7561 atcaggacaa ggcgacgaag ccgcagacag tacaaatagt ac
//
LOCUS       DAXHRP010000098         7595 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.098, whole genome shotgun sequence.
ACCESSION   DAXHRP010000098 DAXHRP010000000
VERSION     DAXHRP010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7595
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.098"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..941
                     /gene="repM"
                     /locus_tag="ACFM72_001474"
     CDS             <1..941
                     /gene="repM"
                     /locus_tag="ACFM72_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="replication initiation protein RepM"
                     /protein_id="HFC6258028.1"
                     /translation="NFHTNRNTAYKALKDACNNLFERQFSFIEKTPKGEKVVRTRWVS
                     QVAYIEQQATVELVFAPNVAPLITMLEKNFTSYELDQVSSLSSKYAVRLYEIIISWRA
                     AGKTPMFSTMELRERLGMMPDEYQKMELFKRKVLDFAVKQINDKTDISITYEQHKEGR
                     KIVGFTFSILHKIGSKDIPLENQSELFAGMTDLEAGTIRVRAEAYIASLIAKGQNVTK
                     AHRLNILKKAVEERWGFEDVAKDNGAKNPENKNAKVVLNEWEKISNGTRFKDKDGTIW
                     VKDSGMLRTEGTNRWIADSQIAKLFPMLTVMVEEGI"
     gene            1038..1454
                     /locus_tag="ACFM72_001475"
                     /pseudo
     CDS             1038..1454
                     /locus_tag="ACFM72_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
     gene            complement(1460..1558)
                     /locus_tag="ACFM72_001476"
                     /pseudo
     CDS             complement(1460..1558)
                     /locus_tag="ACFM72_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1651..>7595
                     /locus_tag="ACFM72_001477"
     CDS             1651..>7595
                     /locus_tag="ACFM72_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HFC6258029.1"
                     /translation="MNRTLYKVVFNKHRNCMIAVAENAKREGKNTADTQAVGILPNDI
                     AGFAGFIHSISVISFSLSLLLGSALILTSSSATAQGIVADKSAPAQQQPTILQTGNGI
                     PQVNIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLARGEARV
                     VVNQINSSHSSQLNGYIEVGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQYQA
                     GDLSGFKIRQGNVVIAGHGLDARDTDYTRILSYHSKIDAPVWGQDVRVVAGQNDVAAT
                     GDAHSPILNNAAANTSNNTANNGTHIPLFAIDTGKLGGMYANKITLISTVEQAGIRNQ
                     GQWFASAGNVAVNAEGKLVNTGMIAATGENHAVSLHARNVHNSGTVASQDDANIHSQT
                     LDNSGTVLSSGRLTVRNLGRLKNQNNGTIQAARLDMSTGGLDNTGNITQTGSQALDLV
                     SAGKFDNSGKIGVSDVPQTGLNPNPSVIPQIPSTATGSGSSTVSVSKPGSNNPVSPTA
                     PAKNYAVGRIQTTGAFDNAGSINAGGQIDIAAQNGLGNSGSLNAAKLRVSGDSFNNTV
                     KGKLQAHDLAVNTQTAKNSGHLLTQTGKIDNRELHNAGEIAANNLTLIHSGRLSNDKK
                     GNIRAAHLQLDTAGLHNAGNILADSGTVTTKNNLRNTGKVSVARLNTEGQTLDNTRGR
                     IEAETVNIQSQQLTNQSGHITATEQLTINSRNVDNQNGKLLSANQAQLAVSDGLNNQH
                     GEIATNRQLSIHDKNQNTLALNNADGTIQSAGNVSLKAKSLANNGTLTAGNKLDIALT
                     DDFVVERDLTAGKQLNLSIKGRLKNTHTLQAGHTLKLNAGNIDNQVTGKIIGGEQTDI
                     TSEQHVDNRGLINSDGLTHIGAGQTLTNTGTGKIYGNHIALDAQILLNREETTEGSTK
                     AGTIAARKRLDIGAKEIHNQEGALLSSEGIFAVGNRLDEQHHAAGMADTFVNGSAGLE
                     VQGDALMSVRNMQNINNHFKTETYLAKAEKQVRDYTVLGQNTYYQAGKDGLFDNSQGQ
                     KDQTTATFHLKNGSRIEANQWHVRDYHIETYKERIIENRPAHITVGGNLTASGQNWLN
                     KDSRIVVGGRIITDDLNQKEITNQSTTGKGRTDAVGTQWDSVTKKGWYSGRKRQRRTE
                     RNHTPYHDTQLFTHDFDTPVSVIQQNAASPSFQPAASAIKLIDGVSTAAVNGQRIHTG
                     NVVSLNNATVTLPNSSLYTTHPDNKGWLVETDPQFADYRRWLGSDYMLQQLKLDTNHL
                     HKRLGDGYYEQKLVNEQIHQLTGYRRLDGYRSDEEQFKALMDNGLTAAKTFALTPGIA
                     LSAEQVARLTSDIVWMENQTVTLSDGSTQTVLVPKVYALARKGDLNTSGGLISAEQVL
                     LKLQNGNLTNSGTIAGRQAVLIQARNINSNGNIQADQIGLKAEKSINIDGGQVQAGRL
                     LTAQAQNINLNGTTQTSGNERNGNTAIDRMAGINVVGSHTEQVDNRTSDGILSLHAGN
                     DINLNAATVSNQVKDGTTQITAGNNLNLGTIRTEHREAYGTLDDENHRHVRQSTEVGS
                     SIRTQNGALLRAGNDLKIRQGELEAEEGKTVLAAGRDVTISEGRQITELDTSVSGKSK
                     GILSSTKTQDRYRFSHDEAVGSNIGGGKMIVAAGQDINVRGSNLISDKGIVLKAGHDI
                     DISTAHNRYTGNEYHESKKSGVMGTGGLGFTIGNRKTTDDTDRTNIVHTGSIIGSLNG
                     DTVTVAGNRYRQTGSTVSSPEGRNTVTAKSIDVEFANNRYATDYAHTQEQKGLTVALN
                     VPVVQAAQNFIQAAQNVGKSKNKRVNAMAAANAAWQSYQAAQQMQQFAPSSSAGQGQN
                     NNQSPSISVSITYGEQKSRNEQKRHYTEAAASQIIGKGQTTLAATGSGEQSNINITGS
                     DVIGHAGTALIADNHIRLQSAKQDGSEQSKNKSSGWNAGVAVKIGNGIRFGITAGGNI
                     GKGKEQGGNTTHRHTHVGSTTGKT"
BASE COUNT         2365 a         1846 c         1732 g         1652 t
ORIGIN      
        1 ataatttcca taccaaccgt aatacggcgt ataaggcttt gaaagatgcc tgtaacaacc
       61 tttttgaacg ccaattcagt tttatcgaaa aaacaccaaa aggggaaaag gtagtacgga
      121 caaggtgggt atctcaagtc gcctatattg aacaacaggc aacggtagag ttagtttttg
      181 caccaaatgt tgcccctttg attacgatgc tagaaaaaaa cttcacaagc tacgagcttg
      241 atcaggtctc atcgttgagc agtaaatacg cggtgcggct ctacgaaatt attatttcat
      301 ggcgtgcagc cggtaagaca ccgatgttca gtacaatgga gttgcgcgaa cgtttgggta
      361 tgatgcctga cgagtatcaa aaaatggagc tattcaaacg taaggttttg gatttcgccg
      421 tcaagcagat caatgataaa acggatattt ccattaccta cgagcagcat aaagaaggac
      481 gaaaaattgt aggttttaca ttctcaatcc tacataaaat agggtcgaaa gacatccctc
      541 ttgaaaatca atcggaactt tttgccggaa tgactgattt ggaagccgga acgatacggg
      601 tcagggcgga agcatatatc gcttcgctca ttgcaaaagg tcagaacgtg actaaagccc
      661 ataggctgaa tattctgaaa aaagccgtag aggaacgttg gggatttgaa gatgtggcta
      721 aagataatgg ggccaaaaat cctgaaaaca aaaatgcaaa agtcgtttta aacgaatggg
      781 aaaagatttc taatggcaca cgttttaagg acaaggatgg aacaatttgg gttaaagatt
      841 caggtatgct taggactgaa gggacaaaca ggtggatagc cgattctcag attgccaaat
      901 tatttcctat gttaactgtg atggttgagg aaggtattta acccggcaac tcgcgtattc
      961 tacctgtttt gcggtacgga aaccaattga acctgcttta cgctacaata gaagattgca
     1021 attttgtcgg atgtaccatg aacgattaca cagccatgcc gtctgaagac ggaggaatcg
     1081 gctcattatc gcttccgccg cactcaatgg aggcggaaca atccgttttg ggcgggttga
     1141 tgctggaaaa tccggcttgg gacaggattg ccgatgtggt ttcgggagag gatttctacc
     1201 gccacgaaca ccgcctgatt ttccgatcca ttgccaaact gatcaatgag agccgtcctg
     1261 ccgatgtcat cacggttcag gaagatttgc agcggaacga agagctggaa gcggcggggg
     1321 gattcgaata tctgattacg ctggcgcaaa atactccgtc tgccgccaac atccggcgcc
     1381 atgccgaaat cgtgcgcgag cgttccatta tgcgccaact cgccgaagtg ggaacggaaa
     1441 ttgcccgcag cgccataccc aaaatatcgg cagcggaacg ggcggtagct tggagtacga
     1501 aaaattcaag cagtttcttt tgaactctat tgtttaattt acaattggtt atctttattt
     1561 tcgtagcctg gcataactgt taatctacgt cagcccctaa aaattaatct aatttacgat
     1621 tataaaaata ttattaagaa agcccttact atgaaccgca ccctgtacaa agttgtattt
     1681 aacaaacatc gaaactgcat gatagccgtt gctgaaaatg ccaaacgcga gggcaaaaac
     1741 acagccgaca cccaagctgt aggtattttg ccaaatgata ttgcgggctt tgcgggtttt
     1801 atccattcta tctctgttat ctcattctcc ctttcattac tgctcggttc tgcccttatc
     1861 ctgacttctt cttctgctac tgcccaaggt atcgttgccg acaaatccgc acctgcacag
     1921 caacagccta ccatcctgca aacaggtaac ggcataccgc aagtcaatat tcaaacccct
     1981 acttcggcag gggtttctgt taatcaatac gcccagtttg atgtgggtaa tcgcggggcg
     2041 attttaaaca acagtcgcag caacacccaa acacagctag gcggttggat tcaaggcaat
     2101 ccttggttgg caaggggcga agcacgtgtg gttgtaaacc aaatcaacag cagccattct
     2161 tcacaactga atggctatat tgaagtgggc ggacgacgtg cagaagtcgt tattgccaat
     2221 ccggcaggga ttgcagtcaa tggtggtggt tttatcaatg cttcccgtgc cactttgacg
     2281 acaggccaac cgcaatatca agcaggagac cttagcggct ttaagataag gcaaggcaat
     2341 gttgtaatcg ccggacacgg tttggatgca cgtgataccg attacacacg tattctcagt
     2401 tatcattcca aaattgatgc acccgtatgg ggacaagatg ttcgtgtcgt cgcgggacaa
     2461 aacgatgtgg ccgcaacagg tgatgcacat tcgcctattc tcaataatgc tgctgccaat
     2521 acgtcaaaca atacagccaa caacggcaca catatccctt tatttgcgat tgatacaggc
     2581 aaattaggag gtatgtatgc caacaaaatc accttgatca gtacggtcga gcaagcaggc
     2641 attcgtaatc aagggcaatg gtttgcctca gccggcaatg tggcagtgaa tgctgagggt
     2701 aaactggtca acacgggcat gattgcagcg acgggagaaa atcatgcggt ttcacttcat
     2761 gcccgcaatg ttcataatag cggtacggtt gcctcacagg atgatgccaa tattcacagc
     2821 cagacgctgg acaattcagg tacggtctta tcctcaggtc gattgactgt tcgtaattta
     2881 ggccgtctga aaaaccaaaa caacggtacg atccaggctg cccgcttaga tatgtcaaca
     2941 ggtggtttgg ataacacagg taatattact caaacaggtt cacaagcatt ggatttggta
     3001 tctgccggca aattcgataa cagtggcaag attggtgtaa gtgacgttcc acagaccggt
     3061 ttgaatccca atccatcagt cataccacag attccgagta ctgcaacagg ttcaggcagc
     3121 agcactgtct cggtatctaa gcctggttca aacaatcccg tttcacctac agcacctgca
     3181 aaaaactacg ccgtaggacg cattcaaaca acaggagcat ttgacaatgc aggatcaatt
     3241 aatgcgggtg ggcaaattga cattgccgcc caaaacggtt tgggaaattc gggtagtctg
     3301 aatgcggcta aactacgagt atcaggcgat tcatttaaca atacggtaaa aggcaaactc
     3361 caggcacacg atctggctgt taacactcaa actgctaaaa acagcggtca cttattaact
     3421 caaaccggca agattgataa ccgtgaactg cataatgccg gagaaattgc cgccaacaat
     3481 ctgacactca ttcattcggg ccgcttgagc aatgataaaa aaggcaatat tcgagctgca
     3541 catttacagc ttgataccgc cggtttacat aatgcaggta acattcttgc cgatagtgga
     3601 accgttacca ccaagaataa tcttcgcaat acaggaaaag tttctgttgc acgactgaat
     3661 accgaaggtc agactctaga taatacgcgc ggacgtatag aggctgaaac ggttaacatc
     3721 caaagtcagc aactgactaa ccaaagcggc catattactg ctaccgaaca actgactatc
     3781 aatagtcgaa atgtagacaa ccaaaacggc aaactcctat ctgcaaacca agcacaatta
     3841 gctgtttcag acggcctaaa caaccaacat ggtgaaattg ccaccaaccg gcagttgtct
     3901 attcacgata aaaatcaaaa cactttggcg ttaaacaatg cggatggcac gattcaatct
     3961 gccggtaatg tatcgctaaa agccaaatca ctcgccaaca atggcacatt aacagccggt
     4021 aacaaactgg atattgcttt gacggacgat ttcgtcgtag agcgcgacct cactgcaggc
     4081 aaacaattaa atctaagcat aaaaggccgt ctgaaaaata cccataccct acaagcaggc
     4141 catacgctca aactcaatgc cggcaatata gataaccaag ttacaggcaa aattattggt
     4201 ggagaacaaa cggacatcac atccgaacag catgttgaca acaggggctt gatcaacagc
     4261 gacggtttga cccacatcgg tgcaggtcaa accctgacca acaccgggac aggcaaaatc
     4321 tatggcaacc atattgccct ggacgcgcaa atactgctta accgggaaga aacgacggaa
     4381 ggcagtacca aagcggggac aatagctgca aggaaacgtt tggatattgg agcgaaagag
     4441 attcataacc aagaaggtgc cctactatcc agcgaaggta tttttgccgt aggtaatcga
     4501 ctggatgaac aacatcatgc ggcaggcatg gccgatacct ttgttaatgg cagtgccggt
     4561 ttggaagtac aaggtgatgc attgatgtcc gttcggaata tgcagaatat caataatcac
     4621 tttaaaacag agacatactt agccaaagca gaaaagcaag ttcgtgacta caccgtactg
     4681 gggcaaaata cctactatca ggcaggaaaa gacggtttat tcgacaactc gcaaggacaa
     4741 aaagaccaaa ctactgctac gttccattta aaaaatggtt ctcgtattga ggccaaccaa
     4801 tggcatgtcc gagactacca catcgagact tataaagaac gcatcatcga aaaccggccg
     4861 gcacacatta ctgtgggcgg taatttgact gcctcaggtc aaaattggct gaacaaagac
     4921 agccggattg tagtaggcgg gcgtattatc actgatgatt taaaccagaa agaaattacc
     4981 aatcaaagta caacaggcaa aggtcgcaca gatgctgtcg gcacacagtg ggattcagtt
     5041 acaaaaaaag gatggtacag cggtagaaaa agacaacgcc gtactgaaag aaaccatact
     5101 ccttaccatg atacccaact atttacccac gacttcgaca cgcctgtatc cgtcatccaa
     5161 cagaatgccg cctccccttc ctttcaaccc gctgcatctg caatcaaact gattgacgga
     5221 gtatccacag ccgccgtcaa tggtcagcgc atccataccg gtaatgtggt ctcgttaaat
     5281 aacgctactg ttactctgcc taacagcagc ctctatacca cccatcctga caataaaggc
     5341 tggttggttg aaaccgatcc tcaatttgca gactaccgcc gctggttggg cagcgactac
     5401 atgttgcaac aactgaaatt ggacaccaat catctacaca aacggcttgg cgacggctac
     5461 tacgaacaaa aacttgttaa tgaacaaatc catcagttaa caggctaccg ccgactcgac
     5521 ggctacagga gtgatgaaga acaattcaaa gctctgatgg acaacggcct tactgctgcc
     5581 aaaacattcg ctctcacccc aggtatcgcc ttgagtgcag agcaagttgc ccgcttaact
     5641 tcagatatcg tttggatgga aaatcaaacc gtcaccctgt ctgacggttc gactcaaacc
     5701 gtactggttc ctaaagtcta tgccctggcg cgcaaaggtg atctcaatac ctccggtggc
     5761 ctgattagtg ccgaacaagt cttacttaaa ctgcaaaacg gcaacctgac taacagcggt
     5821 accattgcgg ggcgacaggc cgtactcatc caggcacgga atattaacag caacggcaac
     5881 attcaagccg accaaatcgg cttaaaagct gaaaaaagta tcaatatcga cggcgggcag
     5941 gtacaagcag gcagactgct gactgcccaa gcgcaaaata tcaaccttaa cggtacaacc
     6001 caaacttccg gtaatgaacg taacggcaat accgccatcg atcgtatggc cggcattaac
     6061 gtggtcggaa gccatactga acaagtagat aacagaactt cagacggcat cctatccctg
     6121 catgccggca acgatatcaa cctcaatgcg gccaccgtct ctaaccaagt taaagacggc
     6181 actacccaaa ttaccgccgg caataatctc aacctcggca ccatccgtac cgaacatcgc
     6241 gaagcctatg gtacattaga tgacgagaac catcgccatg tccgccaaag taccgaagtc
     6301 ggcagcagta tccgcacgca aaacggcgca ctgcttagag ccggtaacga cttaaaaatc
     6361 cgccaaggcg aactagaggc cgaagaaggc aaaaccgtcc ttgccgcggg acgtgatgtc
     6421 actatcagcg aaggacgcca aataaccgaa ctggatacct cggtaagcgg aaaaagcaaa
     6481 ggcatccttt ccagtaccaa aacacaggat cgctaccgct tcagtcatga tgaagcagtc
     6541 ggcagcaaca tcggcggcgg caaaatgatt gttgcagccg ggcaggatat caatgtacgc
     6601 ggcagcaacc ttatttctga taagggcatt gttttaaaag caggacacga catcgatatt
     6661 tctactgccc ataatcgcta taccggcaat gaataccacg agagcaaaaa atcaggcgtc
     6721 atgggtactg gcggattggg ctttactatc ggtaaccgga aaactaccga tgacactgat
     6781 cgtaccaata ttgtccatac aggcagcatt ataggcagcc tgaatggaga caccgttaca
     6841 gttgcaggaa accgctaccg acaaaccggc agtaccgtct ccagccccga ggggcgcaat
     6901 accgtcacag ccaaaagcat agatgtagag ttcgcaaaca accggtatgc cactgactac
     6961 gcccataccc aggaacaaaa aggccttacc gtcgccctca atgtcccggt tgtccaagct
     7021 gcacaaaact tcatacaagc agcccaaaat gtgggcaaaa gtaaaaataa acgcgttaat
     7081 gccatggctg cagccaatgc tgcatggcag agttatcaag cagcccaaca aatgcaacaa
     7141 tttgctccaa gcagcagtgc gggacaaggt caaaacaaca atcaaagccc cagtatcagt
     7201 gtgtccatta cctacggcga acagaaaagt cgtaacgagc aaaaaagaca ttacaccgaa
     7261 gcggcagcaa gtcaaattat cggcaaaggg caaaccacac ttgcggcaac aggaagtggg
     7321 gagcagtcca atatcaatat tacaggttcc gatgtcatcg gccatgcagg tactgccctc
     7381 attgccgaca accatatcag actccaatct gccaaacagg acggcagcga gcaaagcaaa
     7441 aacaaaagca gtggttggaa tgcaggcgta gccgtcaaaa taggcaacgg catcaggttt
     7501 ggaattaccg ccggaggaaa tatcggtaaa ggtaaagagc aagggggaaa tactacccac
     7561 cgccacaccc atgtcggcag cacaaccggt aaaac
//
LOCUS       DAXHRP010000099         7515 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.099, whole genome shotgun sequence.
ACCESSION   DAXHRP010000099 DAXHRP010000000
VERSION     DAXHRP010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7515
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.099"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(112..939)
                     /gene="fghA"
                     /locus_tag="ACFM72_001478"
     CDS             complement(112..939)
                     /gene="fghA"
                     /locus_tag="ACFM72_001478"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HFC6258030.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            complement(948..2057)
                     /locus_tag="ACFM72_001479"
     CDS             complement(948..2057)
                     /locus_tag="ACFM72_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HFC6258031.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFELMHEGKSIRAVIHY"
     gene            2205..2612
                     /locus_tag="ACFM72_001480"
     CDS             2205..2612
                     /locus_tag="ACFM72_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HFC6258032.1"
                     /translation="MAYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(2812..3126)
                     /locus_tag="ACFM72_001481"
     CDS             complement(2812..3126)
                     /locus_tag="ACFM72_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HFC6258033.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(3137..4822)
                     /gene="rpsA"
                     /locus_tag="ACFM72_001482"
     CDS             complement(3137..4822)
                     /gene="rpsA"
                     /locus_tag="ACFM72_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HFC6258034.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDESRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(4978..5634)
                     /gene="cmk"
                     /locus_tag="ACFM72_001483"
     CDS             complement(4978..5634)
                     /gene="cmk"
                     /locus_tag="ACFM72_001483"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HFC6258035.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            complement(5878..7194)
                     /locus_tag="ACFM72_001484"
                     /pseudo
     CDS             complement(5878..7194)
                     /locus_tag="ACFM72_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519747.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
BASE COUNT         1867 a         1809 c         1834 g         2005 t
ORIGIN      
        1 tccgtagagt cggctccttc cggctcagac ggcatacgtt tatgccggca cttcttaccg
       61 ccctcgtgcc ggctatccca aaactgcttt gaacactgaa cgctctttgg tttacttcaa
      121 aaacgcggcg tgataagcaa tatgctcgcc aataaaactg gcgatgaagt aatagctgtg
      181 atcgtagcct ttatggaaac gcacatcgac cggctggttt gccgcacggc aggtttcgat
      241 aaaatcttcg gtacgcaatt gtgtcggcaa aaactcatct tccaagcctt gatcgatgcg
      301 cataccttgc actttatagc cttgttgaat gagtgagttc gcatcatatt gctgccattt
      361 ttcacggtct ttccctaaat aagcagtaaa ggctttttct ccccacggca cgaggcttgg
      421 cgataaaata ggcgaaaagg cagaaacact ttgataacgt tcctgattcc gcagcgccaa
      481 taccaatgcg ccgtgtccgc ccattgaatg ccccataatg gaacgtttgc cgttggtagg
      541 aaagtgtttc tcaatcagac ggggcagctc gttcaaaatg taatcataca tttgataatt
      601 cgccgcccaa ggctgttcgg tcgcattcaa ataaaagcct gcaccctgtc ctaaatcgta
      661 agcatcatcg ttcggcactt gctctccgcg agggctggta tcggaggcca ccacaattac
      721 ttgatgttct gccgcataac gctgaaagcc tgatttggta atgaaatttt gttccgtaca
      781 cgtcaagccg gaaagccaat aaatcacacc aagcggtcga ttttctggat tatttggcaa
      841 atagacggca aatttcattt cgcattgcag cgtttgggca tgatgcgccc aaacttgttg
      901 cgaaccgcca aaaatttgat gttgttcaat cagtttcatc gcatacctta gtagtgaata
      961 acggcgcgga ttgatttacc ttcgtgcatt aactcaaagg cttcattgat ttgatcgagt
     1021 gtcattgtgt gggttacaaa cggttctaac tcaatgtcgc ctttcattga atcttccacc
     1081 attttcggca gttcagagcg acctttcaca ccgccaaatg ctgaaccttt ccaaacacga
     1141 cctgttacca actggaacgg acgcgttgaa atttcttgtc ctgcacctgc tacgccgatg
     1201 ataatggatt gtccccaacc acggtgcgca ctttctaatg cctgacgcat tacgtttacg
     1261 ttgccgatac attcaaaggt gtgatcaatg ccccatttat tgatgtctaa caacacatct
     1321 ttaatcggtt tatcgtaatc gttcgggttc aaacaatccg ttgcaccgaa ctgttttgcc
     1381 aactcaaatt ttgatggatt ggtatcaatg gcgataatgc ggccggcttt ggcttgacgc
     1441 gcaccttgca ccaccgccaa accaatcgcc cccaaaccaa acacggcaac agagtcgcct
     1501 tcttgcactt ttgccgtatt atgtaccgca ccaatacctg tggtaacgcc gcagccgagc
     1561 aaacatactt gttcatggtt ggcttcaggg ttgattttcg ccagtgaaac ttcggcaaca
     1621 acggagtatt cactgaaagt cgaacagccc atatagtgat aaatcggctg accttgataa
     1681 gaaaaacgcg tcgtgccgtc cggcattaag cctttacctt gtgtatcacg cactgagacg
     1741 cacaagttgg ttttacctga acaacaaaac tcacattcgc cacattcggc ggtgtaaagc
     1801 ggaatcacgt gatcacccgg ttttacgctt gacacacctt cgcccacagc aacgaccaca
     1861 cccgcacctt cgtgtccaag caccacaggg aatacgcctt caggatcgct tcctgataac
     1921 gtaaacgcat cagtatggca cacgccagtg tgggtattgc ggattaacac ctcgccttta
     1981 cgcggcattt ctacgtcgat ttccacaatt tgtaagggtt ggttaggggc gaatgccacc
     2041 gccgcacgag atttgatggt tgaatcggtt tgtttcattt ccattgtctt tcctcttaat
     2101 tcattgacaa agttgcctta cctgagcaac atagcaacag tttacacttt agagttaact
     2161 ctaaagcaag tgttttttac tgtttttgtt tagaaggagg gaaaatggct tataccactg
     2221 ccaaagccgc cgaaaaaata ggcatctccg cccacaccct acgtttttac gacaaagaag
     2281 gcttgttgcc taatatcgga cgtgatgaat acggtaaccg ctgttttacc gataacgatt
     2341 tgcaatggtt gggcttattg caatgcttga aaaatacggg gatgagctta aaagacatca
     2401 aacgctttgc ggaatgtacc gtcattggcg acgataccat tgaagaacgc ctttccttgt
     2461 ttgaaaatca aatagaaaat gtgaagtgtc aaattgccga attaaaacgc tatttagatt
     2521 tgcttgaata caaattggcg ttttaccaaa aagcgaaagc attaggctcg gtaaaagctg
     2581 taaatttgcc gcaaattcct gaaacggctt agttttagtg caataagcag gatttttgtc
     2641 ctgttcgtaa tagaaatcaa aaatttgttg tttaaaaagc ggattgtaag caatgataaa
     2701 aaaatccacg ctctaatccg ttgcttgctt gtcttaaggt attgaagcag cggatgaagt
     2761 taaaccacag aaaaaaaacg ccgcttggaa gcggcgtttt gatgctaagg tttaattggc
     2821 attttctttt aaagccaaat cgacccgctc gcgcaattct ttaccgggct tgaagtgggg
     2881 tacatgtttt tcaggtactt ccacacgctc gccggttttg ggattgcgac cgatgcgggc
     2941 aggacgatgg ttcaaatcga agctgccgaa accgcggatt tcgatgcgtt gacctcgggc
     3001 aagcgatcta gtcatggtgt caaccaagac ttttacgctg tactctacgt cttttgccag
     3061 aagatgcgtg ccgtttttgg cggcaaacac ttctgccaaa cgaaccatta actcagactt
     3121 tgtcatgtct gcaaccttat tcttgttcgc cggagagttt ggctttcagc aggtcgccca
     3181 agctggtggt gccggcattc gcattggcgg cggcattgac ggagttcagt gcttcgcggc
     3241 tttctttggc atctttggct ttaacggaaa gtttgatgct gcggtttttg cggtcaacgg
     3301 taacgatgac ggcttcaact tcgtcgcctt ctttcagttt ggtggtcaaa tcttcaacgc
     3361 ggtcggctgc aaattcggaa gcaggcaggt agccttctac ttcgtcagac agggcgataa
     3421 cagcaccttt ggcgtcaaca gatttcacgg aacctttaac caaagaacct ttgtcgttca
     3481 cgctgatgaa gttgccgaac ggatcgcctt ccagttgttt gatacccaag gagatgcgtt
     3541 ctttttccac gtcgattgcc aatacgacgg cttcgacttc ttcgcctttt ttgtatttgc
     3601 gtacggcttc ttcgccggat tcggtccagg acaggtcgga caggtgaacc aaaccgtcga
     3661 tgccgccagg cagaccgacg aatacgccga aatcggtaat ggatttaacc gcgccggaga
     3721 ttttgtcgcc tttgttgtgg ttggcggcaa attcttccca aggattggct tggcattgtt
     3781 tcatacccaa agagatacgc cggcggcttt catcgatttc gaggatcatt acttcgactt
     3841 cgtcgcccaa ttgtacaact ttgctcgggt gtacattttt gttggtccaa tccatttcgg
     3901 aaacgtgcac caagccttcg atgccttgtt cgatttcaac gaacgcaccg tagtcggtca
     3961 ggttggatac tttaccgaac aggcgggtac cttgcgggta acgacgggtc aggccgctcc
     4021 aaggatcttc gcccagttgt ttcataccca gagaaacgcg ttgtttgtct tggtcgaatt
     4081 tcaggacttt agcttctact tcttgaccga cttccagaac ttcgctcggg tgtttcacac
     4141 ggcgccatgc caagtcggtg atgtgcagca gaccatcgat gccgcccaag tcaacgaatg
     4201 caccgtaatc ggtaatgttt ttaacgatgc ctttgatgac ggagccttct tgcaggtttt
     4261 ccagcagggc tttgcgttct tcacccaagg tagcttccag aacggcgcgg cgggacacaa
     4321 caacgttgtt gcgttttttg tccagtttga tcactttgaa ttcaatttct ttaccttcga
     4381 agtgagaagt gtcttttaca ggacgtacgt cgaccaaaga acccggcagg aatgcgcgga
     4441 tgctgctaat cataacggtc aggccgcctt tgactttgcc gttgatgatg ccggacagga
     4501 tgttgccgtt ttccatggct tcttccaggg caatccaatc ggcagcgcgt ttggcttttt
     4561 cgcgggacag tttggtttcg ccgaagccgt tttcgacgga ttcgatggta acggtaacga
     4621 agtcgccgac tttaacttca atttcgcctt gagcgttttt gaattcagct acatcaatca
     4681 gggattctga tttcagacct gcgtttacgg taacgaagtt ttggtcgatt gccactactt
     4741 cagcggtaat cacctcaccc gggttcattt cttgcagggt aaagctttct tccaacagct
     4801 gagcaaaatt ttccatagac atatataact cttttcggta caccgccaag gggtgcgggg
     4861 tgggttggtg ggtgtctgcc gtccttggca gggcagacgg gtaaataagg tttcagacgg
     4921 catatggggg atttttatgc cgtctgaaac ataatgtggg caattatacc tgaaaattta
     4981 aactttacga taccaatcaa gcactttttt tacagtttct tctatagtca ggcggctcgt
     5041 atccaaaagc agggcatcgg gttgttgttt caggggggca accttgcggt ttcggtctgc
     5101 ctcgtctctg gcttcgatgt cggacaggat gcgctcgaat gccaaacctt cgcaggggat
     5161 gccgatttgt ttggcgcggc gttcggcacg gattttggat tctgccgtca ggaagatttt
     5221 aagttcggct tgggggaaga cgaccgatcc ggtgtcccgt ccgtcggcaa ccagtccttt
     5281 ttcggtcaga aaatcgcgtt ggcgttgcag cagggcggcg cggactttag gcaactgtgc
     5341 gactgcggat gcgcccatgc cgatggcttc tgtccggatg ccgtctgaaa cgtcttcgcc
     5401 gccgagcagg atgcggctgc ctgaaaatac ggcgggcagt ttttttgcca gttcggaaac
     5461 gttttcttca tcgtgccatc ccacgccttg tttttgtgca tatagggcag tcaggcggta
     5521 gagtgcgccg gtatcgagat aatcgtatcc caatgcggcg gcaacgcggg cggcaaccgt
     5581 gcctttgccc gatgcgcccg ggccgtcgat ggcgatgact ttttgtctgt tcataagggg
     5641 gattcctgat ggtttggggt atgggttttg ccgtctgaag gatgtgtttc ccgttggggc
     5701 ggattctacc tgttttaaag gacgattgtc taagcagacg gaacgccgcc tgcccggaaa
     5761 catccgacag aagccggcaa gccggttcgg attccggcgt tgcgggtatt gtggcgggca
     5821 tcaatgcaat gccgtctgaa agaggtatga ccttcagacg gcattgattg ctgcggatta
     5881 gaacaggttg ctgataaaaa tcagcagaat caccaacggc acgaggtatt tcacataggc
     5941 aaaccaaata ttgaccgtcg tatggttgcc tttataaagc aattcttcct tcgcttcgtc
     6001 cttcatcaca aaaccgacaa acagcgcgga accgagcgcg gtcagcataa acaagatgtt
     6061 gccgctgatg tagtcgaagg catcgaaaat atttttgccg aacacggaaa cgtctttcca
     6121 cggaccatag ctcagaatgg acgggatgtt gccgaaaatg aagatggcag ccaatacaat
     6181 cgtaatcgcg gcggtacggc ggattttggt tttttcctga atggtcgtaa tcaacacttc
     6241 ataaatggtc agcgaagttg tcaacgcggc aatcaggagc agcgagaaga aaatcacggc
     6301 gaacacagat cccgcccaca tatgtgagaa cacaatcggc aagctttgga acaccaaagt
     6361 cgggccggaa tcgggggcaa cgccgaagct gaagagcgac gggaaaatca taaagcccgc
     6421 aagtatggcg atgatggtat tggtaattgc cgtgataact gccgtctgaa ccagattttc
     6481 gtttttatcc aaatagctgg acaaggtaat catcacgccg aaacccaggc tcagggcaaa
     6541 aaatacctgc cccaaaacga agacgaacag ttcggcggta atcttgctga aatcaggttt
     6601 cagatagaaa gcaacccctt ccattgcgcc cggaagggta acgttgcgga cgaccatcgc
     6661 gattaggaac aaaaacagca gcggcatcag ctattttgcc gctttttcaa tgccgccgat
     6721 aacgcctttg accaaaatcc attggttcac ggcgacaaaa agcagcgtat aaaacgcaat
     6781 ttcccaaggg ctgttttcga tgtgttcggt aaagaagctt tttgtaacca taccgtcgac
     6841 ggggctggaa atgtccagat tgccgccgat aatgttgacg atatagctga ttacccagcc
     6901 gccgagcacc atataataag ccataatgcc gaacgcgccg agcagtcccg cccagccgac
     6961 cagcttccaa attttagcga cgggtttgcc gttcatcgag ccgccgaacg catccagcgc
     7021 gttcacgcct ttgcgccgtc cgatgacgtt ttccaccaaa atcatcggta taccgataac
     7081 gagcatggcg atacagaata aaaacacata cgcgccgccg ccgttttcac cgaccaaata
     7141 cgggaaacgc cacgtcgcgc cgaagccgac agtcgcgccg gcaacggtca ggatataggt
     7201 taatcggctg gatcaggttt gacgattggt atttgaaggg gaagacatat tgaaaccgtg
     7261 tccgattgag ataaagcgga aattctacac gcgtttttta acaggaactg actgattgct
     7321 tttcaactgt ctagtgattt tccatgtaaa aggcatatat ttcagtgagt atttctgatg
     7381 agtataaccc gatgaggaag aatcggagtt tataaataga ttaatttgtt attcttctac
     7441 atcggtgtat ggaaatgaaa ttttgttaat tatattaatg atagcattta aataatgatg
     7501 aaagagaggg aattt
//
LOCUS       DAXHRP010000100         7386 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.100, whole genome shotgun sequence.
ACCESSION   DAXHRP010000100 DAXHRP010000000
VERSION     DAXHRP010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7386
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.100"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(146..2749)
                     /gene="pepN"
                     /locus_tag="ACFM72_001485"
     CDS             complement(146..2749)
                     /gene="pepN"
                     /locus_tag="ACFM72_001485"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HFC6258036.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLSVKINGVAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDCFTTMGGRNVKIEFYTAEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNSFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2960..3754)
                     /locus_tag="ACFM72_001486"
     CDS             complement(2960..3754)
                     /locus_tag="ACFM72_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HFC6258037.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            complement(3871..4005)
                     /locus_tag="ACFM72_001487"
     CDS             complement(3871..4005)
                     /locus_tag="ACFM72_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258038.1"
                     /translation="MPSERIFRSILRLVGVSSETVKQKFAGVELSYAGKAAGESLYCL
                     "
     gene            complement(4505..5374)
                     /locus_tag="ACFM72_001488"
     CDS             complement(4505..5374)
                     /locus_tag="ACFM72_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HFC6258039.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIRTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5425..5961)
                     /gene="ruvC"
                     /locus_tag="ACFM72_001489"
     CDS             complement(5425..5961)
                     /gene="ruvC"
                     /locus_tag="ACFM72_001489"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HFC6258040.1"
                     /translation="MAASVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAP
                     LADRIAVIVRHIGEVVTVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQPDAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5964..6203)
                     /locus_tag="ACFM72_001490"
     CDS             complement(5964..6203)
                     /locus_tag="ACFM72_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HFC6258041.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6233..7243)
                     /gene="dusB"
                     /locus_tag="ACFM72_001491"
     CDS             complement(6233..7243)
                     /gene="dusB"
                     /locus_tag="ACFM72_001491"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HFC6258042.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCREFGAGWAVCEMLTS
                     DPTLRNTRKTLHRSDFVDEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVRAAGVPVTLKTRLGWHDDHQNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECAAAILNHIRAIHAFYGDTAGV
                     RIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAEKTDSWACAYRPN
                     AF"
BASE COUNT         1645 a         1948 c         1957 g         1836 t
ORIGIN      
        1 gtcgccttgt cctgattttt gttaatccac tataattaat atgactttgc ggccgttttg
       61 ccattgcgta ataaaacgat ggggaagtga tgataaaacg tgtgtgtaac tatatcagac
      121 ggcattgttt ttctgtttga cggcctcaat ccaaaatttt gccgacgatt tcgcccacgt
      181 ctttcgacaa tccttcctgc gcccgaatgc gctgcaatgc ttgtttcacc aagtttttgc
      241 ggtgcggctc gagcttgttg cagaggttga acgcctgcac caaacgggcg gcgacctgcg
      301 ggttgaagcg gtcgatttcg atgactttgt cggcgatgaa gcggtagccg ctgccgtctt
      361 ctgcgtggaa atgcgggacg ttgcggctga agctgccgat gagcgaacgg gctttgttgg
      421 ggttttcgag gctgaatttc ggatgctgca aggcggtttg aacctgttgc agggtgtcgc
      481 tgcgacggct tgagccgacg agggcgaaat atttgtccat caccagcgcg tcgtctgaaa
      541 acttgtcggc aaactgcgcc agcaggcggt tgcgcgtatc gctttcgttg ccgttgacgg
      601 cggacaggat gccccattcg tgggtcatgt tttgcgccat ttcgccgtat ttttcggcaa
      661 cggtttcgat gtgcgcgggg tcggcgcgca ggacgaaggc gcggcagacg ttgcgcagcg
      721 tgcgccagcc ggcagcttcg gggctgtact cgtagctttg gttttcctgc ttcgccgcct
      781 gacggttcaa ttcgtgccat ttcggcagga agcggacggc aagcgtgtcc aacaaggctt
      841 cgcgcgcctg atggtagcgc agcgggtcga tgttttccgc gccgtcccac agctcggctt
      901 cagacggcac gcccaaaagc agggctttga aggcgttgtc taagaggtcg tctgaaatga
      961 ctttttcgac ggcggcaagc agtttttcgt gtttcggcag ttcaataccg tctgaaagtg
     1021 cggcaaggtt ggcggcgacg gcacggcggt agagcgtttg tgcggcttcc cagcgcgtga
     1081 aggcgtcgct gtcatgggcg agcagaagca gcaggtcgtc gtcgctgtac ggatagttca
     1141 gatgcaccgg cgcgctgaac ccgcgcagca gcgagggaac gacggcttcg gttacgcctt
     1201 cgagcaggaa gatctgttcg gcttcggtca gcagcaatac ggcttcggtc gcgcgtttgc
     1261 cctgataatc gaatgccacc gcttcgccgt tgcggttcag cagcccgact ttgacgggaa
     1321 tcatcatcgg ctgcttgtcc gccatatcgg gcgtgggcgg cacggtttgt ttgatggtta
     1381 actcgaaact attgtttttc agacgacctt ccgcttccaa gacgggcgta cccgcctggc
     1441 tgtaccacaa ggcgaactgg tcgagattga tgccgttcgc gtccgccatc gccgcgcgga
     1501 aatcgtcgca ggtcacggcc tgcccgtcgt gtcgttggaa atagagcttc atgccttttt
     1561 ggaagccctc ttcgccgagc aaggtgtgat acatccgcac cacttccgcg cctttttcat
     1621 aaacggtcat ggtgtagaaa ttgttcatct cctcatagct ggcggggcgc accggatggg
     1681 cggtcgggcc tgcgtcttcg gggaactggt gctggcgcag caggcggatg ttctcgatgc
     1741 ggcgcacggc gcggctggcg cggtcgccgg aaaattcttg gtcgcggaac acggtcaacc
     1801 cttctttcag cgaaagctgg aaccaatcgc ggcaggtaac gcggttgcct gtccagttgt
     1861 ggaaatactc gtgtccgacc acggattcga tgccttcaaa atcggtatcg gtggcggtac
     1921 ggctgtcggc aaggacgaac ttggtattaa aaatgttcag ccccttgttt tccatcgcac
     1981 ccatattgaa atcgcccacg gcgacgacca tgaaaatatc caagtcgtat tccaaaccga
     2041 agcgcgtttc gtcccacttc atcgcgtttt tcaaggattc cacggcaaag ccgaccttag
     2101 gcttgtccgc ctcggcagtg taaaactcga ttttgacgtt tctgccgccc atcgtggtga
     2161 aacagtcttc cgtgaccgcc aaatcgcccg cgaccaaagc aaacagatag ctcggtttgg
     2221 caaacgggtc ttcccatttc acccaatggc ggccgtctga acactcgccg ccgtcgattt
     2281 tgttgccgtt ggagagcaaa acgggatagc gttttttgtc cgcaacgatg gtggtcgtga
     2341 atttggacat cacatccgga cggtcgatgt agaacgtgat tttgcggaag ccctccggct
     2401 cgcattgggt aaacagattg ccaccggaag catacagccc catcagcgat ttgttttccg
     2461 ccggcaggat ctcggtttcc acttcgacgg tgaagcgttc ggacggcacg tctgcaatcg
     2521 tcagagtctc gccttccaac acataatccg ccgccacgcc gttgattttg acggacaaga
     2581 gtttcgccga accgtccaac accagcggct cccctaccct ctgcggctca accgtcaaac
     2641 gcgacttcac gacggtttgc ggttcggcaa tatcgaaatg caggtcggtt tcgagaatgc
     2701 ggtaggcagg cgtttggtaa tctttcagat aacggacggt tttgctcatt tttttctttc
     2761 aatattgttt ggtttgactg gaaaaggctt cagacggcac ggatacagct tttaaagcgg
     2821 attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tactgatagt acgggctgta
     2881 ccggtttgaa tttaatccac catatgccgt ctgaaccgaa acggcggcac aagcgtaccg
     2941 ccttcggaca gcagattttc tatttccacg cttggacaaa ttctgcccaa tgcggtttgt
     3001 cttctgtttg ggcggaaaga tagtttctga tccgcttgat ttccatttcg tattcgtccg
     3061 cgtcgaatct gccgctgacc agacaaaaac gcagatacat caaatacgta ttcacggcat
     3121 cggtttcgca ataattgcgg atttctttca gcctgcccgc gtggaacgca tcccacacct
     3181 tgctgccgtc catacccagc ttgcccggaa aaccgcacag tttcgccata tcgtccagcg
     3241 gcacgtttgc cctcggctgg taaagcgcga gcaaatccat caaatcgcag tggcgttggt
     3301 gataacggct gatgtagttg ttccacttga aatcgcggct gtcgccgaaa tcgccgtcgc
     3361 ccatatccca atagcgcgcg gcgttaatgc cgtatatcag ggagcggtaa tgcagtacgg
     3421 gcaggtcgaa accgccgccg ttccaactga ccagttgcgg cgtatgtttt tcaatcaatt
     3481 cgaaaaattt ggcaatgacc acttcctcgc cgtcatccat ctcgccgatg gtgccgacat
     3541 ggactttatc ctgcccccaa cgcatacagc acgaaatcgc cacaacctga tgaagatgat
     3601 gctgcataaa atcgccgccc gtttgggcgc ggcgtttctg ctgggcaaac agcaccactt
     3661 catcgtcggg cagcgaggac ggcagctcgt acaatgttcg gataccctgc acatcgggta
     3721 cggtttcaat atcgaaagcc aaaatcgtat tcatggcagt accttgcatt caaaaacaga
     3781 cttgcgccta ttgtgtcatt aaaaggcgga taaaaaaaga ggcaaccccc cacaggattg
     3841 ccccaatacc tcaaatcaga gatttacgct tcacaaacaa tacaggcttt cgcctgcggc
     3901 tttgcccgcg tagctcaact ctacgccggc aaacttttgt ttcaccgttt ccgatgaaac
     3961 cccgaccaat cgcaagattg accggaaaat cctttcagac ggcatttcct gcctgtcgtg
     4021 taattccatg tagcgaaatg tacgccattt tctacgcttt gccaagcatt ttttacaata
     4081 taaatgtcaa aacattaatt ttataaaatt gctgaaaata ttaaatatat gaatttttat
     4141 tttaaatatt ttaataaata taaatttaat tttgatttat atttaaattt aagcataaaa
     4201 tgttaaatat taaaggcaat atgaaaggca tatattaaat atttatttat aacgctatgt
     4261 ttttaaagaa aattaatttt aatatattaa ctagattgtc tgcagatatt catgggtttg
     4321 cggtatttct tccaaaacct gcttcgaatt ttccgaccaa gtcttaaaaa tattgttttt
     4381 tgagatactt aaatagcagc gattatcaaa tgaaatctgt tcatataatc tgccatttcg
     4441 catttaaaaa aacaaacagg agtttcgact cgaaacgcct gatatgtttt gtaattttac
     4501 gtagtcagta aaaatcgggg ctgccttccg gacgggtttt aaaacgcttg tgcagccaaa
     4561 aatattgttc tggatgttcg cgcacccgct cttcgataaa gcggttcata cgctgcgcat
     4621 cggcttgcgc gtcttcaccc ggaaaggatt tccaagccgg gtagaattgc aatgtaaccg
     4681 tattgtccgc ctcgcggaca gggatggcgg gtatcacttt tgcatttgca agcgcggcaa
     4741 tgcggctcaa tccggtaatc gttgccgtcc gaataccgaa gaaatccaca aaaaccgaat
     4801 cgttgcgtcc gaaatcctga tcgggcagat acagaaacgg cgcgctgctt ttgcggaact
     4861 gtttgacgag ggcgcgcagc ccttcggtgc gcccgatgag gaagacgttg tcgtagcggt
     4921 tgcggccttt caaaatctgt gcgtccaata tcttgttttt ttggtgggaa tacatactaa
     4981 ttagcgggac atcctgatta agcgcgtaca ccgccatctc gaacgcggta aagtgcggat
     5041 acaggatgat gactttttcc cccgccgcca gcgcgtcgtc caaataatgc ttattgcggt
     5101 agcgcaccag cgatttcaaa cgcccggcgg gcgcgtacca atataagccg tattcgagca
     5161 tcagtttcgc catatgtttg aaatgctgtt tcaacacggt tttacgcttt tcctcactcc
     5221 attcgggaaa acatttcgcc aaattgattt cgccgatacg gcggcggggt ttgaccaaaa
     5281 ggtaggcaag caaacccgtc agatcggcaa gtttgtgcag cagcgcaaac ggcagaaact
     5341 gcaaaacata cagtacaaaa aatataaatt tcatctcgat acacattttc ttttcagacg
     5401 gcaaaataca aatgccgtct gaaactattg aaacctgccg cgcttgacct gcatccccga
     5461 aggattgagt ttggcggcaa gcccgtggtt gcgtaaggcg tgggtcagcg cgacggcaag
     5521 accgtccgcc gcatccggct ggggcgttcc cgaaagtccc aacatctgca ccaccatatg
     5581 ctgcacctgt tcttttgccg ccttgccctt gccgactacc gcctgtttga cctgcaaggc
     5641 cgtgtattcc gaaacgggca gcttatggct gaccaatgcc gccaatgccg cgcccctagc
     5701 ctgaccgagc atcagcgtcg atgccggatt gacgttgacg aacacctgtt ccactgccgc
     5761 ctgttgaggc ttgtaaacgg taacgacttc gccgatgtgc cggacgatga cggcaatcct
     5821 gtctgccaga ggcgcatcgg caggcgtttt gatgcagccg gaggcgacgt aaaaatgatc
     5881 ccgccccctg acatcgatga caccgaaacc cgttacgcga ctgcccgggt cgatgcctaa
     5941 gatacggacg cttgcagcca tattcacaac aaaccgtgtt gaatcagctt cttacgcagg
     6001 gtattgcggt tcagccccag catcacggat gctttggact ggttgccgcc gcattgctcc
     6061 atcacgcaca ccagcagcgg tttttccacc tgatgcaata ccatatcgta cacgccgcaa
     6121 ggttcggtac cgttcaggtc tttgaaatat tgttctaaat tttgtctgat gcattgggaa
     6181 atatcgggaa gggtatgggg catgattgca ctttcaaagg ataatcaagt gttcagaagg
     6241 catttgggcg gtaggcgcac gcccaactgt cggttttttc ggcaagtctt tcaagataac
     6301 ctgcaagcat gtcgtattgc gccgccgcac tgtccaagcg gttgatttca cgacgtgtct
     6361 gttcgccgtc gggcatttcg tcgatgtacc agcctatgtg tttgcgtgcg atgcgcacac
     6421 cggcggtgtc gccgtaaaac gcgtgtatgg cgcggatgtg gttcaaaata gcggcggcgc
     6481 attctgccaa actcaaggca ggcggcaaaa caccgtgttc ggcataatgt ttcaaatcgc
     6541 ggaagaacca cggcctgcct tgcgcgccgc gccctatcat aatgccgtcg gcggcggttt
     6601 gtttgaggac ggcttgggct ttttgcggcg aagtaatgtc gccgttgacc cagaccggga
     6661 tgttcagacg gcatttggtt tcggcgatga gttcgtaacg cgcttcgcct ttgtacattt
     6721 gcgtacgcgt gcgtccgtgg acggcaaggg cggcgatgcc gcaatcttcg gcgattttgg
     6781 cgatgacggg caggttttga tggtcgtcgt gccaacccaa acgggttttg agggtaacgg
     6841 gtacgcctgc cgcacggacg acggcttcca aaatggcggc aaccagcggc tcgttctgca
     6901 tcagcgcgct gccggcttgg acgttgcaca cttttttggc gggacagccc atattgatgt
     6961 cgataagctg cgccccgagg ctgacgttgt aacgcgccgc atccgccatc tgctgcggat
     7021 cgctgccggc aatctgcacg gcaacgatgc cgccttcatc gacaaaatcg ctgcggtgca
     7081 aggtttttct agtatttctg agcgtcgggt cgctggtcag catttcgcac actgcccaac
     7141 ccgcgccaaa ctcgcggcaa aggcggcgga agggtttgtc ggtaatgccc gccatcggcg
     7201 caagtgcgat ggggttgtcg ataaaatagc cgccgatgtg cataatgggt ccgcgtttca
     7261 aaaaagtgcg acattgtaca ttttttaagc aggatttcca atctccggac gcgcccgcga
     7321 ttggggcggg caccgtttta tggcataatc cgcacacaga tttcctgccc cgccactcac
     7381 aggcgg
//
LOCUS       DAXHRP010000101         7351 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.101, whole genome shotgun sequence.
ACCESSION   DAXHRP010000101 DAXHRP010000000
VERSION     DAXHRP010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.101"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            37..180
                     /locus_tag="ACFM72_001492"
     CDS             37..180
                     /locus_tag="ACFM72_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258043.1"
                     /translation="MMLNQGFCEAFIVVVLMGIAAIMRKRPSFSKPPHRFRVCPSSRP
                     DLQ"
     gene            217..429
                     /locus_tag="ACFM72_001493"
     CDS             217..429
                     /locus_tag="ACFM72_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HFC6258044.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            577..2160
                     /locus_tag="ACFM72_001494"
     CDS             577..2160
                     /locus_tag="ACFM72_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HFC6258045.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESGAFSQTAI
                     NNLEARARLMGLHPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     KHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDTDLH
                     VSFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYAAAFVEHGAEAFVQ
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2242..3339
                     /locus_tag="ACFM72_001495"
     CDS             2242..3339
                     /locus_tag="ACFM72_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFC6258046.1"
                     /translation="MNHTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIGVVQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3453..4568
                     /locus_tag="ACFM72_001496"
     CDS             3453..4568
                     /locus_tag="ACFM72_001496"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HFC6258047.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     ACGQALLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4693..5148
                     /locus_tag="ACFM72_001497"
     CDS             4693..5148
                     /locus_tag="ACFM72_001497"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HFC6258048.1"
                     /translation="MKKLKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKYGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5219..5695
                     /locus_tag="ACFM72_001498"
     CDS             5219..5695
                     /locus_tag="ACFM72_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HFC6258049.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5683..6609
                     /locus_tag="ACFM72_001499"
     CDS             5683..6609
                     /locus_tag="ACFM72_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC6258050.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTTEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6674..7231
                     /locus_tag="ACFM72_001500"
     CDS             6674..7231
                     /locus_tag="ACFM72_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC6258051.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGLTEDLAQKASDKAVANESGNGLKN
                     TAGTIAMARTTAPDSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1924 a         1811 c         1911 g         1705 t
ORIGIN      
        1 tgttaatcca ctataaatgc gccgattgcc aaggcgatga tgctcaacca gggtttttgc
       61 gaagcgttca ttgttgtcgt cctgatggga attgccgcca ttatgcgcaa gcgtccgtct
      121 ttttccaaac cgccgcaccg tttccgcgtt tgcccaagtt cacgccccga cttacaataa
      181 cgcccgtcag attgcagttc caacgaaagg aaaatgatgg aaacccttat cctcgacatc
      241 ggcggcatga gctgcggcgg ctgcgtcaaa agcgttaccc ggatattgga aggcgtaaaa
      301 ggcgtggcaa gcgtcgaagt cagccttgaa aacaaaagtg cgaccgtcgg atacgacccc
      361 gcgcaaaccg atgcaggggc gttgattgaa gccgttgaag acggcggcta tgatgccgcg
      421 ttgaaataaa gcggcaaaaa tgccgtctga agccttcgcg cctcccagat gccgtctgaa
      481 gtacgctccg cgccttcaga tggcatttga tttagttgaa cgggtaggat gaattggtta
      541 aacttgcggg caatagtgcc ttcagacaaa caaaatatgc cgaacaaaaa gaaaaaagcc
      601 gcctttgcgc gtgctgcaac ggagaacggt gtgccggacg tgtccaacat caaaaattca
      661 tatgatgatt tgatgtatga atccggcgca ttctctcaaa ccgccatcaa taatttggag
      721 gcgcgcgccc gcctgatggg tttgcatccc gcgcccgccg ccaatgccaa ggtcttggag
      781 ctgggctgtt cgatgggcgg caacatcatc acgcaggcac tttattaccc ggatgcggaa
      841 tttgtcggta tcgacttgtc cggcaggcag gttgcgcagg gcaatgccat cattgaaaaa
      901 atgggcttga aaaatgtgcg tctggaagaa aaagatattt tgaccgtcga tgaatcattc
      961 gggaagttcg actatatcat cgtccacggc atttggtcgt gggtgcctga cgcagttaaa
     1021 gacaaaatct tttcgatttg ccggaacaac ctgaccaaac acggcattgc ctatatttca
     1081 tacaatgttt accccggctg gaaacggcag gagcagttgc gcgaaattat gtactttgcc
     1141 ggcagggatg tgcttgaaga acccttggaa gcgcggacgc ggaaaggctt ggacgcgctc
     1201 aaggcgctgg cggaaatttt ggaaaacgac aagggcttgg acggcggcgg caaacttccg
     1261 gcgattcaaa aaatattgaa tcataatttt tattacatcg cacacgaata tatggaggcg
     1321 tttaacgacc cgatttacgt caacggcttc atcgaatggg ctaatcgcca caggctcgca
     1381 tatatcggag ataccgattt gcacgtgtct tttgtttctt ggatggcgga gcatacgcgg
     1441 gagcggattt tggcattggc agggggcgat tatattgcca aagaatttta cagcgatatt
     1501 ttatccgacc gccaattccg ccgttcgctt ttatgccgtg aggaagtcgg ggatactgtc
     1561 aggcgtgacg agtcggttgc cgtcgaagtg atagaaagtt tgaatttccg cccggcaaga
     1621 ggggaaacaa tcaactttga tgaaaacgat accctgcttt cgggcatacg cgatgtgatg
     1681 aaaaccggag agccgtttaa aacggaagat gttgcggaaa atctcgcccg ccgatttccc
     1741 ggtttgacat tcgaccgtat gaaaatcaat tcccagcttt tattgcaaac cattctcggg
     1801 cgtttttctg tttcatcaga caatgcgggc aaacaatttt ttgaagacca taaaacctat
     1861 gtgccggcgc gttttacaga ttatgccgcc gcctttgtgg aacacggcgc ggaagcgttt
     1921 gtccagcctg ccaaccgtta caacgaaagc accccctcat tcgggtacgg gcatttgtac
     1981 attatgcggc aattgtcgcg gccgacgagc aaacaggcat tgattgaaac ggttgccgaa
     2041 aacttgaaca tcgtcagcac cacgcccgac ggtttgacat tccatccgcc tgccgaagtg
     2101 tatgtggaag aaatattggc agacttggca gacaggcatt ttctcgtttc ggcggattga
     2161 cgggcaagtc ccgacggcaa tccgtccgat atattttcag acaggaaaga cacacactgc
     2221 gaaaagcggt acacgacaca tatgaaccat acatttacct tgcccgatac gcgcccgtat
     2281 ccccaaaatc cgattaaaaa ccacctgctg ctcaatgcct accagttggc gcacaattct
     2341 tcccaggctt cgcgcaaact ctcgtccggc caacttcaaa ccgaaatcag ggggatgctt
     2401 gaacaaaacc actatatcaa cctttccctc gcgctgacga tgtcgcccga tgccggaact
     2461 tatgccgcgc tgctttccag cgtgaacgcg gtactcgatt gcgagaaaga aggcgaagtg
     2521 cagtggttcg ccctgccggt cgtgctggtg tccggctgca agaaagaacg ggcaatcgag
     2581 atgaagctgc cgacggaggc attgtttgcc tgcctgcaaa actatccgca cctgcgcgcg
     2641 ttgacgcaag agacgcaatg gctgccttat cttgtacatt cctccgattt gagtgcggtc
     2701 gcgccggatg agtggtggcg tgccaaacaa aataccgaag cggcggcgca acacttacgc
     2761 cgtttcgccc cgcgcccttt gcttttgccc gaagggcagt ccgtccacgt cgtttacgcg
     2821 ctgggtttcg gcagcggcaa agttcagacg gcattgggtc agaaccttct tcaggcaggt
     2881 ctgcccttga tgcaggtatg gcaggaaaat cttgcatcgg aaggcgttac gctgtttgcc
     2941 aatccacttt ccccggattc tccggtacgc gcgctttcag acggcagcca cacgcgccaa
     3001 cgtatggcga tggatgtgtt tgcggcaaac gcgatacgcg ccgtccgtat gcagagtccg
     3061 cgcgtcggcg tggtcgctgc ggcaaaggcg ggcgggcagg ttttattcgg gtttaatgcg
     3121 accgacggcg cgtttgaagt cgtgccgcag gtgttttcgt ggcagctttc ctttaccgac
     3181 aatattggcg ttgttcagca aaattttttg gatttaatgg cagaatgccg tgtagaacac
     3241 gtttacctgt tgcacaatcc cttgggcgaa caggaaagca tcccgagcta tgcggaagca
     3301 ttgaaacggg aagggcacaa tccgtttttc agcgcatagt gatttgtagt agtgataggc
     3361 tttctcattt atataataaa tcaaaataaa gagcacaaca ctttttcatt ctgtgttgtg
     3421 ccttgagtga aacgaaagga tgaattataa atatgaagat tgtaattgca ccggattcgt
     3481 ttaaggaaag cttgacagct caacaggtag ctgaagcaat aaaaagaggc ttccaacaat
     3541 cgatagcaga tgtggaatgt ctcctctgtc ctgtcggtga tgggggagaa ggcactgtag
     3601 atgctatccg acattctctt gacctagaag aaaaatgtct tcaagtgaca ggaccttttg
     3661 gacaaaaaga agtcatgcgc tattttcaaa aagaacaact agccctattc gaagttgctg
     3721 atttggttgg tcttggaaaa atcccgctag agaaacgaaa tccattacaa atccaaactc
     3781 gtggtattgg agaattgatt cgccacctca ttagtcaaga aattaaagaa atctatattg
     3841 gcgttggcgg tacggccagt aatgatggag gtattgggat tgctgctggt ttaggttatc
     3901 aattttatga tgaggatgga aataccttgc ccgcttgcgg tcaagcctta ctaaacctag
     3961 cttctgtttc aacagaaaat cgctatgaaa ttcctgaaga tgttcacatt cgtattttag
     4021 cagatgttgt gagtccctta tgtggacacc aaggtgcgac ctatacgttt ggcaagcaaa
     4081 aagggttgga ttctactatg tttgaggccg tagatcaggc aatacaagat ttttatgaaa
     4141 aagtctcccc tgcaacatta aaacttaaag gagcaggagc tggtggaggc atcgctggtg
     4201 gtttgtgtgc ctttgctcag gcaagtatcg tatctggaat tgacacctgc ctggacttga
     4261 ttgactttga taagaaagtg tcagatgttg acttggttat cgttggtgaa ggaagactag
     4321 atcgtcaaag tttagcaggg aaagcgccta ttggtgtagc aaaaagaacc cctgtcggag
     4381 ttcctgttgt cgctatttgt ggcagtctcg ttgaagattt gccttccctg ccatttgaaa
     4441 atatccaagc tgccttttct attttggaga aaagtgaacc tttagaagat agtttgaaaa
     4501 atgccagtct ctatttggag catacggctt ctaatattgg acacttatta aatatgccta
     4561 agatttagcc aaaccatttc ttccagatgg atgttttggc tggttctgcc ttatgcggtt
     4621 acgattaacc gaccgatgcc gtctgaaagg gtttccgctt cagacggcat cgcgccggaa
     4681 cagggagggg atatgaaaaa actgaaaatc ctttttgtct gcctcggcaa catctgccgt
     4741 tcgccgatgg cggaatacat tttgcgccgc cgcgccgccg aagcgggcat tccccttgaa
     4801 gcggacagcg cggggacatc gggctggcac gacggcgaag atatgcaccg cgagacggca
     4861 aagatattga aaaaatacgg tatcgatgct tcaggcttta ccagccgcaa aatccgccaa
     4921 agcgatgcgg cggcgtttga ctgcatcatc gcgatggacg gcaagaattt gtccgaattg
     4981 gaaagaacct tcggcaggcg gccggaaaaa atattcaagc tgaccgacct gatacccgaa
     5041 agcggttacg accatgtccc cgatccgtgg tacacgggcg attttgaaga aaccttcagg
     5101 cttgcggatg cgggctgtcg ggcattgttg gaaaagattt ccaaataaag caattgaata
     5161 caaatataaa accgcctcct gccgtatcgg ttgttcagac ggcataaaca gagaatttat
     5221 gaaaacaaat ttcaaacaga aaattatcga acaggcacgc agcgaaggct tgcaggtaac
     5281 cgctttgcgc gagcaggtat tagatattgt cttgcagcaa agcggcgtga ttaaagccta
     5341 caacgtcttg tcgcagatgc agcagcaaag cgagggcgtg cttgcaccgc ctaccgccta
     5401 ccgcgccctt gatttttggg cggagcaggg cgttttgcac aaagtggcgg cggtcaacgg
     5461 ctatattttg tgcagccacg cgcagcacga gtgcgacgac cattgccacg accacgaaga
     5521 agccgaagcg caccacagcg cgtttatttt ggtctgcacc gaatgcggca cggcggacga
     5581 gcaaaccctc agccacgagt gggcggcact gcgcgcaggc gttgccgaaa gcggctttgc
     5641 gctgaaagaa gaacacgttg ttttaactgg gatttgtaaa aaatgtcaga aatgaaaaaa
     5701 accaaagtcc acctgatttc aggttttctg ggaacaggca aaaccaccgc gctcaaaagt
     5761 ctgatggaac aaaaagaccc caacgaaaaa tgggtcatca tcgtcaacga gtttggcgaa
     5821 atcggcattg acggcgcggt attgagcgac aacggcatcc ctgtggcaga aatcgccggc
     5881 ggctgtttgt gttgcaccgc cggcccgcaa atgggcgtaa ccgtgcagaa aatgctgcgc
     5941 gatgccaagc ccgaccgcct gatgattgag gcaagcggac tggcgcacgc cgccagcgtc
     6001 atcgacgaac tcaaagccaa accgctggac agccttctgg aaatcggcgc cgtctttacc
     6061 gtcgtcgatc cgcgccagtt catcaacccc gattacgcgc aacaggcgtt gtataaagac
     6121 caaatcggca tctgcgacgt attggtcgcc agcaaaaccg atttatgcac caccgaacag
     6181 cttgccgaat ttcacgacaa agcggcaaaa ctgttcccgc ccaaagccaa agtggtcgaa
     6241 gtccaaaacg cacaactcga catccggtgg ctcgatattc ccgtcatcga aaaatcacgc
     6301 taccgcctca aagccctgcc ggacaacacc atgggcttcc agtcgcaagg tttcacattc
     6361 cccgccggac gcgatttcga cggcgaaaag ctgaccaact ttttcaacga cctgcccaaa
     6421 atgaccgaag gactcgtccg cgccaaaggc gtgtttcaag tattgggaac gtgggtgtgg
     6481 ctcaactggg tagacggaca gtggggcgcg aaccaagtct catggcggcg cgattcgcgt
     6541 tttgaattga ttgccaaatc gtttgatgcg gatttaatcg aacaaaagct caaagacgca
     6601 ttggaatagc gttcacgcgc tttcagacgg catatgaaat gaaaatgccg tctgaaggct
     6661 ttaggaggac gggatgaaac ccaaattcaa aaccgtttta accgcgctgc ttttggcggt
     6721 ttccctgccg tctatggcgg caacccatgt tttgatggaa accgatatgg gcaatatccg
     6781 tttggttttg gacgaatcca aagcccccaa aaccgttgct aatttcgtgc gctatgcccg
     6841 aaaaggcttt tacgacgaca ccgtttttca ccgcgttatc gacggttttg ttatccaggg
     6901 cggtggattg accgaggact tggcacaaaa ggcaagcgat aaggccgttg ccaacgaatc
     6961 cggcaacggc ttgaaaaaca ccgccggcac catcgccatg gcgcggacga cagcccccga
     7021 ttccgccacc agccaattct ttatcaatct ggcggacaac gcttcgctcg actacaaaaa
     7081 cggacaatac ggctataccg ttttcggcag ggtcgaaagc ggcatgaaca ccgtttccaa
     7141 aatcgcccgc gtcaaaaccg ccacgcgcgg cttttatcaa aacgtacccg tacagcccgt
     7201 caaaatccgt cgcgttgttg tcgggcagta acacgcagac agacgttcag acggcgtcgc
     7261 ccgtttccca aaaaacgccg tttaaagtaa aaaaatattt taaaacagac agttgatatt
     7321 gacaaattca aaccgaggat tttaaaatgc t
//
LOCUS       DAXHRP010000102         7349 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.102, whole genome shotgun sequence.
ACCESSION   DAXHRP010000102 DAXHRP010000000
VERSION     DAXHRP010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7349
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.102"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(18..503)
                     /gene="purE"
                     /locus_tag="ACFM72_001501"
     CDS             complement(18..503)
                     /gene="purE"
                     /locus_tag="ACFM72_001501"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HFC6258052.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLNMELEQ
                     I"
     gene            complement(551..1264)
                     /locus_tag="ACFM72_001502"
     CDS             complement(551..1264)
                     /locus_tag="ACFM72_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HFC6258053.1"
                     /translation="MKIKLPLFIIWLSVSASCASVSPVPAGSQTEMSTRENASDGIPY
                     PVPTLQDRLDYLEGKIVRLSNEVETLNGKVKALEHAKTHSSGRAYVQKLDDRKLKEHY
                     LNTEGGSASAHTVETAQNLYNQALKHYKSGKFSAAASLLKGADGGDGGSIAQRSMYLL
                     LQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLI
                     QTYPGSPAAKRAAAAVRKR"
     gene            complement(1264..1932)
                     /locus_tag="ACFM72_001503"
     CDS             complement(1264..1932)
                     /locus_tag="ACFM72_001503"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC6258054.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(1943..2128)
                     /locus_tag="ACFM72_001504"
     CDS             complement(1943..2128)
                     /locus_tag="ACFM72_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HFC6258055.1"
                     /translation="MYHYQSDATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            2272..4248
                     /gene="mutL"
                     /locus_tag="ACFM72_001505"
     CDS             2272..4248
                     /gene="mutL"
                     /locus_tag="ACFM72_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HFC6258056.1"
                     /translation="MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIE
                     VELAGGGIRLIRVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQNDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGEDFQT
                     ASLGIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTE
                     SVGNAGEVLHDITGVVSTPMPSENDSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSPSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGNLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLNELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            4343..6457
                     /gene="dnaX"
                     /locus_tag="ACFM72_001506"
     CDS             4343..6457
                     /gene="dnaX"
                     /locus_tag="ACFM72_001506"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HFC6258057.1"
                     /translation="MAYQVLARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYEPAALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIINQDGAALTAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELKSPSAQTAEKETAAK
                     KPQPRPEAETAQTPVQTASAAAMPSEGKTAEPVTNQENNDIPPWEDAPDETAAGTAQA
                     SAKSIQTASEAGTPPKNQVSKNEAADNETDAPLSEVPSENPIQATPNNEALETEAFAH
                     EAPAKPFNGYSFPNDDYLVEDGAEIPPPDWEHAAPADAEEENNADESSNNEDHTPYAP
                     PPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATADKKR
                     LDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADPAAQ
                     KILQAFGAQWQPESLELAANRP"
     misc_feature    5532..5571
                     /gene="dnaX"
                     /locus_tag="ACFM72_001506"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            6537..6872
                     /locus_tag="ACFM72_001507"
     CDS             6537..6872
                     /locus_tag="ACFM72_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HFC6258058.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
BASE COUNT         1845 a         2252 c         1845 g         1407 t
ORIGIN      
        1 ttcacagacg gtgggtttta aatttgttcc aattccatat tcaaaacagc ctgttcctgt
       61 ttggctcgga agtctgccag tttttgcgcc agttcggggg tttcgttggc gagcatggaa
      121 acggcgaaca atgcggcatt tgccgcgcct gcctcgccga tggcgaatgt ggcgacgggt
      181 acgcctttgg gcatttgtac aatcgataaa agcgaatctt cgccgcgcag gtatttgctg
      241 gggacgggta cgcccaaaac ggggacggtg gtcttggcgg caaccatacc gggtaaatgc
      301 gccgcgccgc ccgcacccgc gatgatggct ttgatgccgc gcgcccgtgc ggtttcggcg
      361 tattggaaca tcaaatccgg ggtgcggtgt gcggaaacaa cgcgcgcctc atattctacg
      421 ccgaactctt caagaaactg cgctgcctgc cgcataacgg gccaatcgct gttgctgccc
      481 atgatgatgc cgatttgtat cataaatcct ccttggtgcg gatggggtaa aaagcggaaa
      541 aatggaaaaa ctatcgtttg cgcacggctg cggcggcgcg ttttgccgcc gggctgccgg
      601 gataggtctg tatcaggctg cgccaagtcg cccttgcaat gtctttttgc tgaagcctgt
      661 attggcattc gccgattttg aacatggctt caggcgcggt tgggctgtct ttgaaacggt
      721 tggcgtaacg ccctccgatt tcgatgacgg attcgcagtt gcccatacgc gccctgcttt
      781 gcagcaacag gtacatactg cgttgcgcga tgctgccgcc gtcgcctccg tccgcgcctt
      841 tcaacaggga ggcagcggca gaaaacttgc cgcttttata gtgtttgagt gcctgattgt
      901 agaggttttg tgcggtttcg acagtatgtg cggatgcgct gccgccttcg gtattgaggt
      961 aatgctcttt caacttgcgg tcgtcgagtt tttggacgta tgccctgccg gaagaatgtg
     1021 tttttgcgtg ttccagtgct ttgactttgc cgtttaaggt ttccacttcg ttcgacagcc
     1081 ggacgatttt gccttccaga tagtccaaac ggtcttgcaa ggtcggaacg ggatagggaa
     1141 tgccgtctga agcattttcc cgtgtcgaca tttcggtttg gctgcctgcc ggaacgggtg
     1201 aaacggaagc acaggaggcg gacacagaca gccaaatgat aaaaagcggt aatttgatct
     1261 tcattatttt ttcagaagca gggtcaagcc gtcgccgacg ggcagggtga tggggacgat
     1321 gcgcgggtcg ttcggcaggt tttgattgaa atctttgagg atgccgacgc tgggcggcgc
     1381 atcggaagcc gcttcgcgca tcacccttcc gttcagcaaa atattgtcga tggcgatgat
     1441 gccgccttga cggacgagtt tgaggcaacg ctcgaaatat tgcggcgtgg gcggtttgtc
     1501 tgcgtctatc agtgccaaat cgtagcttcc ggcttcaccc tgtgcaatca aatcatccaa
     1561 tgtcagcaat gcgggttgca ggtgcaggct gattttatgt gccacaccgg cctcgttcca
     1621 aacctgacgc gccgtatcgg taaaggttac attgatgtcg caggcggtaa tccgcccgtg
     1681 ttcgggcagt gccaatgcaa gcgcggtgct gctgtatccg gtaaatacgc cgatttccag
     1741 atatttttcc gcacggatca gctttgccag ccaaaccaaa actgccgcct gttcgcgcgc
     1801 aatcgccatt ttgcccatac ggtgatgccc ggtcttctcg cgcagccgcg tcaaaacggg
     1861 atgttcgggt tcgccgatgg cgttcaaata gttttgcagg tccggtgcga cattggacag
     1921 atgggtcgtc atttcggcgg attcagtctt ggtaataggt ataaggtttt ttcgccactt
     1981 ttgccgcctc gaagttttcc tgttcttcgg gattgagttc gacatcccac aaaagccccc
     2041 tgttttccaa acgctgctgt tccaactcag gtttttcttc aatcaggcgg ttgaggaatt
     2101 gtgtggcatc ggattggtag tgatacatct ttgtgctcca attttacgga atatggcgtg
     2161 attatactgg tattttccaa acgggataaa cggcttttat caagaatacg ggcagaaaga
     2221 taaggggttt tattatagaa taagacgttt tttgcaacgg aagcccgcct tatgtcccga
     2281 atcgccgccc tgcccgacca tcttgtcaac caaatcgccg ccggcgaagt ggtcgaacgc
     2341 cctgccaacg ccttgaaaga aatcgttgaa aacagtatcg atgcaggcgc aacggcgatt
     2401 gaagtcgagc tggcgggcgg cggcatccgc ctgattcgcg tcagcgacaa cggcggcggc
     2461 atccaccccg acgacatcga acttgcgctc caccgccacg ccaccagcaa aatcaaaacc
     2521 ttaaacgatt tggaacacgt cgccagtatg ggctttcgcg gcgaaggttt ggcaagcatc
     2581 gcctccgtca gccgcctgac cctgaccagc cgtcagaacg acagttcgca cgcgacccaa
     2641 gtcaaagccg aagacggcaa actcagcagc cccaccgccg ccgcccaccc cgtcggcacc
     2701 accatcgaag ccgccgaact cttcttcaac acccccgcac ggcgcaagtt cctcaaatcc
     2761 gaaaacaccg aatacgccca ctgcgccacc atgctcgaac gcctcgcgct ggcgcatccg
     2821 cacattgcct tctcgctcaa acgcgacggc aaacaagtgt tcaaactccc tgcacaaagc
     2881 ctgcatgaac ggattgccgc cattgtcggc gaagactttc agacggcatc attgggaatc
     2941 gacagcggca acggcgcgct gcggctctat ggtgcgattg ccaaaccgac tttcgccaaa
     3001 ggtaaaaccg acaaacaata ctgcttcgtc aaccatcgct tcgtgcgcga caaagtgatg
     3061 ctccacgccg tcaagcaggc ataccgcgac gtattgcaca acgcactcac tcccgccttc
     3121 gtcctctttc tcgacctgcc gcccgaagcc gtggatgtca acgtccaccc gaccaaaacc
     3181 gaaatccgct tccgcgacag tcagcaggtg caccaacttg tgttccacac gctcaacaaa
     3241 gcccttgccg acacacgcgc caacctgacc gaaagcgtcg gcaacgcagg cgaagtgttg
     3301 catgacatta ccggcgttgt ctccacccca atgccgtctg aaaacgacag cgaaaatctg
     3361 tttgatagcg tatccaacta cccgacaggc aacaaatcag atacacacaa tgcctttggt
     3421 tcatcaggca aaaccgcgcc catgccctat cagtccgcat atgcgccgca acaacgcagc
     3481 ctgtccctgc gcgaaagccg cgcggcaatg aatacttacg ccgaacttta caaaaaaacc
     3541 gacgacatcg accttgagtt aagccgattc gagcaggcac gtttcggcaa tatgccgtct
     3601 gaaacgcctg ctccccaaac agatacgccg ctttcagacg gcatcccatc cccatccgaa
     3661 ctaccgccgc tcggttttgc cattgcccaa ttacttggca tctacattct tgcccaagcc
     3721 gaagacagcc tgttgctcat cgatatgcac gccgccgccg aacgcgtcaa ctacgaaaaa
     3781 atgaaacgcc aacgtcagga aaacggcaac ctgcaaagcc aacgcctgct tattcccgta
     3841 acctttgccg cgtcccacga agaatgcgcc gcccttgccg attatgccga aacgctggca
     3901 ggcttcgggc tggaattatc cgatatgggc ggcaacaccc tcgccgtccg tgcagttccc
     3961 gccatgctcg gcaaagccga tgtcgtctcg ctcgccaaag acgtattaaa cgaactcgcc
     4021 caagtcggca gcagccaaac catcgaggaa cacgaaaacc gcatcctcgc caccatgtcc
     4081 tgccacggct cgatccgcgc cggccgccgg ctcaccctgc ccgaaatgaa cgcccttctg
     4141 cgcgatatgg aaaatacgcc gcgcagcaac cagtgcaacc acggcaggcc gacttgggtc
     4201 aaactgactt tgaaagaatt ggacgcactg ttcttgcgcg gacagtaagc cgaaagtgct
     4261 agaatacgcc gcccgagact gccgttcaga cggcattccg acgcaccgac agaaacatca
     4321 cgaccgaaac caagagaaaa acatggccta tcaagttctc gcccgaaaat ggcggcccaa
     4381 aacctttgcc gacttagtcg gtcaggaaca cgtcgtcaaa gccctgcaaa acgccctgga
     4441 cgaaggcagg ctgcaccacg cctacctgct gaccggcacg cgcggcgtag gtaaaaccac
     4501 catcgcccgc atccttgcca aaagcctcaa ctgcgaaaac gcgcaacacg gcgaaccttg
     4561 cggcgtatgt gaaagctgta cgcagatcga tgccggacgc tacgtcgacc tgctggaaat
     4621 cgacgccgcc tccaacacag gcatcgacaa catccgcgaa gtcttggaaa acgcccaata
     4681 tgcaccgacc gccggaaaat acaaagtcta tatcatcgac gaagtgcata tgctttccaa
     4741 aagcgcgttc aacgctatgc tcaaaacgct ggaagagccg cccgaacacg tcaaattcat
     4801 cctcgccacc accgatccgc acaaagttcc cgttaccgtc ttgagccgct gcctgcaatt
     4861 cgtcttacgc aatatgaccg cgcaacaggt tgccgaccac ctcgcccacg tcctcgacag
     4921 cgaaaaaatc gcctacgaac ccgccgccct gcaacttttg ggacgtgccg ccgccggatc
     4981 gatgcgcgat gccttgagcc tgctcgacca agccatcgcc ctaggttcgg gcaaagttgc
     5041 cgaaaacgat gtccgccaaa tgatcggcgc ggttgacaaa caataccttt acgaactgct
     5101 gacaggcatc atcaaccaag acggcgcagc cctgaccgcc aaagcgcagg aaatggcggc
     5161 gtgtgccgtc ggctttgaca acgccttggg cgaacttgcc atactgctgc aacacctcgc
     5221 cctgatacag gcagtgccga atgccttggc gcacgacgac cccgattccg atattttgca
     5281 ccgcctcgcc caaaccataa gcggcgaaca aatccagctt tactaccaaa tcgccgtcca
     5341 cggcaaacgc gacctcagcc tcgcccccga cgaatacgcc ggctttatga tgaccctgct
     5401 gcgtatgctg gcgtttgcgc ccttggcggc agcatcgtgt gatgcaaatg ccgtgattga
     5461 aaataccgaa ctaaaatccc catcggcaca aaccgccgaa aaggaaaccg ccgcaaaaaa
     5521 gccccaaccg cgccctgaag cggaaaccgc ccaaacaccc gttcagacgg catccgcagc
     5581 agcaatgccg tctgaaggca aaactgccga acccgttacc aatcaagaaa acaacgatat
     5641 tccgccttgg gaagacgcgc cggacgaaac cgcagccggc acggcgcaag catcggcaaa
     5701 aagcattcag acggcatccg aagccggaac gccgcccaaa aaccaagttt ccaagaacga
     5761 agcagccgac aacgaaaccg atgccccctt gtccgaagtg ccgtctgaaa accccattca
     5821 ggcaacaccg aataatgaag cccttgaaac agaagcattt gcacacgaag ctcctgcaaa
     5881 acctttcaac ggttacagct ttccgaatga tgactacctc gtagaagacg gcgcagaaat
     5941 cccaccgccc gattgggaac acgccgcccc tgccgatgcg gaagaagaaa acaacgccga
     6001 cgaaagcagc aacaacgaag accacacgcc atacgccccg ccgcccgaat tttccaccga
     6061 aaactgggca gccatcgtcc ggcacttcgc ccgcaaactc ggcgcggcgc aaatgccggc
     6121 gcaacactcc gcgtggacgg aataccatcc cgacaccggt ctgatggttt tggcaatgac
     6181 cgccgaagca cgcgccaccg ccgacaaaaa acgcctcgac aaaatccgcg acacccttgc
     6241 ccaagcctac gggctgcaac tcaccctgca aacccaagac tggcgtgacg aagccggccg
     6301 ggaaaccccc gcgatgcagg acaagcgcgt ccaagccgaa gacaggcaaa aagcacaagc
     6361 attgctcgaa gccgaccccg ccgcacaaaa aatcctccaa gcattcggcg cgcaatggca
     6421 gcccgaatca ctggaattgg cggcaaaccg gccataaaca gatataatgc cgcccgaacc
     6481 cttcggacgg cattgccgtt tcccttattc aatcaaaaca gacaggagta ttcagtatgt
     6541 tcggaaaagc cggattaggc ggcctgatga aacaggcgca gcaaatgcag gaaaatatga
     6601 aaaaagcgca agccaaactc gccgaaaccg aaatcgaagg cgaagcaggc aacggcctgg
     6661 tcaaaatcac aatgacctgc gcgcacgaag tacgcaaaat cgacatcagc cccgatttga
     6721 ttcaagaagc cgccgacgac aaagaaatgc ttgaagacct catcctcgcc gccctcaaat
     6781 ccgcccgagg caaagccgaa gaaaccgcaa acaaaacaat gggcgcattc acgcaaggtc
     6841 taccccccgg agtgggcgac ttcttccgct gatccccgac cgtcattccc acgcaggcgg
     6901 gaatctagaa cgtagaatct aagaaaccgt tttactcgat aaatttccgt gccgaggggt
     6961 ctggattccc gccttcgcgg gaatgacggc atcagtttgc aagattcggc gtgaacggta
     7021 aaaacagtga gaatgataag aacgcaaaaa cggcaagaat agcgggaatc ggcaggctga
     7081 agcccaccct accattattt acacatccgt accgcttaaa tgccgtctga aatttcgtca
     7141 ttcccatgaa aacgggaatc cagccccgtg ggagcagaaa cttacacccc gtcattcccg
     7201 cgaacgcggg aatccagtaa ccgaaaaacc acaggaatct atcggaaaaa acagaaaccc
     7261 ccgccgccgt cattcccgcg aacgcgggaa tctagaacgt agaatctgag aaaccgtttt
     7321 actcgataaa tttccgtgcc gacaggtct
//
LOCUS       DAXHRP010000103         7326 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.103, whole genome shotgun sequence.
ACCESSION   DAXHRP010000103 DAXHRP010000000
VERSION     DAXHRP010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.103"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            252..1787
                     /locus_tag="ACFM72_001508"
     CDS             252..1787
                     /locus_tag="ACFM72_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC6258059.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1784..1876
                     /locus_tag="ACFM72_001509"
     CDS             1784..1876
                     /locus_tag="ACFM72_001509"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HFC6258060.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(1912..3156)
                     /gene="lysA"
                     /locus_tag="ACFM72_001510"
     CDS             complement(1912..3156)
                     /gene="lysA"
                     /locus_tag="ACFM72_001510"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HFC6258061.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVEPKNIAPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3167..3337)
                     /locus_tag="ACFM72_001511"
     CDS             complement(3167..3337)
                     /locus_tag="ACFM72_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC6258062.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QSKPQSAPPTQK"
     gene            3408..3731
                     /gene="cyaY"
                     /locus_tag="ACFM72_001512"
     CDS             3408..3731
                     /gene="cyaY"
                     /locus_tag="ACFM72_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HFC6258063.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIAEL"
     gene            3786..4292
                     /gene="luxS"
                     /locus_tag="ACFM72_001513"
     CDS             3786..4292
                     /gene="luxS"
                     /locus_tag="ACFM72_001513"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HFC6258064.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            4438..7254
                     /gene="polA"
                     /locus_tag="ACFM72_001514"
     CDS             4438..7254
                     /gene="polA"
                     /locus_tag="ACFM72_001514"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HFC6258065.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLRAALPRLPLSYDLVTIKTDVDLHAELSDGIESLRCTTPKWAQLVVDFK
                     RWGFRTWLKEAESRMHEAADGDLFGSDTIGEQAALDMETSSERLPEKAVAPEKLDYQA
                     VTTEAQFATLLDKLSQAEKIGIDTETTSLDAMNAALVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGHLKPYLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTEEGRKVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFDRYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETELDFVKEKLPQIMAK
                     VDGGLLDVPLVAEVGVGENWEEAH"
BASE COUNT         1669 a         1948 c         2027 g         1682 t
ORIGIN      
        1 cggcagctaa aaatcctaca ggattggtgt gggatttagg gctaatctag tacagcccct
       61 aaaatttttc gttttcaaac cttcaccgct tgccatcagc gttaaatttt tttacgataa
      121 gcacatagat tgtaaacaat cggccacaag ccggtttgtt ttttcagaag acattatccc
      181 tgtcagacgc tatttctata tatttcgcct ataatggctt gtttttaata aataattcaa
      241 gaggtatcaa cgtgtctgat tccaagacga aagaacgcgc tacattcggc acgcgccgcg
      301 cgtttatgat tgccgccatc gggtccgccg tcggcttggg caatatttgg cgtttcccct
      361 atattgcttt tgaaaacggc ggcggcgcgt tcatcctgcc ctatctggtc gcgcttctga
      421 cggcgggcat cccgctgctg ctgctcgatt atgccatcgg ccaccgttac cgtggttctg
      481 cgcccttggc tttccgccgc ctcggacgat ggtttgagcc ggtcggctgg tggaacgtga
      541 tgaccaatat cgtcatctgc atctattacg cggtaattat cggttgggcg gcaagctata
      601 cctattattc ggtcaacgcc gcctggggtg cggatccgca gggttttttc tttaaagact
      661 tcctgcaaat ggcgggcccg gaagccttgg gtttggattt tgtcggcaaa gtggccggtc
      721 ctttggcggg cgtgtgggtt tttaccgccg ccattatggc tttgggcgtg caaaagggcg
      781 tggcgcgcgc ctcgtcgttc tttatgccgc tgcttttggt gatgtttttg attatggtcg
      841 gcatttcgct gacgttgccg ggcgcggcaa agggcttgga cgcattgttt acgcccgact
      901 ggtcgaaact cgccgattcc aaggtctggg tggcggcata cgggcagatt ttcttttcgc
      961 tttccatctg cttcggcatt atggttacct attcttctta tttgaagaaa aaaaccgact
     1021 tgggcggaac ggggctggtg gtcggttttg ccaacagcag ctttgaactg ctcgcgggca
     1081 tcggcgtgtt tgccgcattg ggctttatgg cgcaggcggg cggtaaggcg gtcaacgagg
     1141 ttgcctcagg cggcatcggt ttggcgttta tcgcctttcc gaccattatc aaccaggcac
     1201 cgatgggctg gctgatcggc atattgtttt tcggttcgct ggtgttcgcc ggcgttacgt
     1261 cgatgatttc catccttgaa gtgattgtgg cggcgattca ggacaagctg aacatcgggc
     1321 gcgtcaacgc cacgctgctg gtctgcattc cgatgggcat tgtttccacg ctgctgttcg
     1381 gtacggcgac ggggctgcca gttttggacg tgatggacaa attcgtcaac acctacggca
     1441 ttgttgccgc cggctttgtt tatgttgccg ccatcatcat cagcggcagg ctgccggaat
     1501 tacgcaagca cctgaacgct ttgtcctcca tccgcatcgg cggcttgtgg acggtctgcg
     1561 tcgtggttac cgtcgtgatg ctcggctata tgctgtttaa agataccagc ggcctgatgg
     1621 agaaaaatta cgaaggttat ccggatggtt tcctcagtat tttcggctgg gggatgtcgg
     1681 cggcgttggt cgtgttcggg ctgctgctgt cgttgctgcc ttggaaacac ggtcaggatt
     1741 tcaacgtcaa agacgaacac gaacatgaac aaggagaaga aaaatgagta cttccgccat
     1801 tgtgatgatg attgtctcaa tcgtgataat ctggggaggg ctgctgcttt ccctgttaag
     1861 gctgccaaac gagtaagcct ttagagcgtt aaaaatgccg tctgaaccgc ttcagacggc
     1921 attttgatgt tcggcttgca ggcaggcgag ttcgtttgcc atttgctgtt ctaaggtttc
     1981 gcgtcggcgg atgagtttgt atccgccacc gttaaccaac acttccgccg cacggttgcg
     2041 cgcgttgtaa ttgctcgcca tactggctcc gtatgcgccc gcgctgcgga taagcagcaa
     2101 atcgccttct tcgcaggcga tggtgcggtc tttgccgagg aagtcgccgg tttcacaaat
     2161 cgggccgacg atgttggcag tcagcggcgc gatgtttttt ggttctaccg cttcgatgtg
     2221 atgataggca tcatataggg cggggcgcat taaatcgttc atcgccgcat cgaccatcac
     2281 aaagtttttc tcttcgccgt atttgacgaa ttcgacacgc gtcaacaacg cgcctgcgtt
     2341 gccgaccaag ctgcggccgg gctcaagaat gagtttcaga cggcgtgtgc cgatcagttt
     2401 ttgaaccgct tgggcatacg cgcccaaatc aggcactttt tcgttttggt aaacaatgcc
     2461 gacgccgccg cctaagtcca aatgttccaa aacaatgcct tcggcggcaa gcgcgtcaac
     2521 caaaatcaaa atgcgttcgc aggcttcgac aagcggactt aagtcggtta gttgggagcc
     2581 gatgtggcag tcgatgccga tgattttcaa attgggctgt tgtgcggcgt ggcggtaggc
     2641 ttcgagcgcg tcggcgtagg cgatgccgaa tttgttggct ttcagacctg tggagatgta
     2701 gggatgggtt tttgcatcga catcgggatt gacgcgcagg gagacgggcg cggttttgcc
     2761 taaacgcgcg gcaactttct gaatacggtc gatttcgggg atgctttcca tattgaagca
     2821 tttcacgcct gcattcagcg cgaactcgat ttccgcctcg cttttgccta cgcctgaaaa
     2881 tatggttttt gccgcgtcgc cgcctgccgc caaaacgcgt gccaattcgc cgccggacac
     2941 aatgtcaaaa ccgctcccca aagaagcaaa gtgtttgatg atgctcaggt tgccattggc
     3001 tttaaccgca tagcagacga gcggggagag ctcggcaaag gcagtttggt agtgttcaaa
     3061 tgcttcggtc agcgcggatt ggctgtacac ataaagcggt gtgccgaatg cttcggcaag
     3121 gcgggggtag gggacttgtt cgcaaaatag ggtcatgttt tcgttttcat ttttgggttg
     3181 gtggagcgga ttgcggtttg ctttgaagct gcaaaccggt ttggattacg ccgaaacgcg
     3241 ccttgtcgcc ttctttgggc aggtagaggt cgcctttgta accgcaggcc gagagcagga
     3301 gggcggttgc cgccgcaaaa aatacgccgt atttcatcgg taaacttcct tcataagcgc
     3361 gaatgtggca agattcggca tcttaaacaa aaaacacgca aaaagccatg atgaccgaaa
     3421 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     3481 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccggagacg
     3541 gcacgcaaat catcgtcaac cgccacacgc ccaatcagga attgtggatt gccgccaaaa
     3601 gcggcggcta ccatttcgcc gagcaaaacg gcaaatggct ggcaacgcga gacagccgcg
     3661 atttttatga tgttttaaac gaagccctga gcgcggcttc gggcgaagcg gtggaaattg
     3721 ccgaattgtg attcagtatt caaatatccc tagttaagaa tctattgacc ttaaaggata
     3781 acccaatgcc cctactagac agtttcaaag tcgatcacac ccgtatgcat gcccccgccg
     3841 tacgcgtggc gaaaaccatg actacgccca aaggcgacac cattaccgtg tttgacctgc
     3901 gcttttgcgt tcccaacaaa gaaatcctgc ctgaaaaagg catacacacg ctggagcatt
     3961 tgttcgccgg ctttatgcgc gaccacttga acggaaacgg cgtggaaatc atcgacattt
     4021 ccccgatggg ctgccgcacc ggtttctaca tgagccttat cggcacgcct tccgaacagc
     4081 aggtcgccga tgcgtggctg gcttcgatgc aggatgtttt gaatgtcaaa gaccaaagca
     4141 aaatccccga gttgaacgaa taccaatgcg gcacttatca aatgcactcg ctcgccgaag
     4201 cgcagcaaat cgcgcaaaac gtgttggcgc gcaaagtggc ggtgaacaaa aatgaagagc
     4261 tgacgctgga tgaagggctg ctgaacgcct aatccgccaa aaatgccgtc tgaacaaggg
     4321 tttcagacgg catttgcctt ttccgttata atctggggtt gtgcgggggc gggttttaag
     4381 ccggcatcgt ccttccctat ttttttctgt cccttatcgg ttttaagcgg gttttttatg
     4441 tccaacagac ctacactcct cctcgttgac ggatcgtcct acctctaccg tgcgtatcac
     4501 gcgatggggc aaaacctgac cgcacccgac ggtgcaccga cgggtgcgct gtatggcgta
     4561 ttgaatatgt tgcgccgttt gcggtcggaa tatccgcacg attattgcgc ggtggttttt
     4621 gatgcgaaag gcaaaaattt ccgccatcaa atgtttgaag aatacaaggc gacgcgcccg
     4681 ccgatgcccg acgatttgcg tccgcaggcg gaagctttgc cggatttggt gcgcctgacg
     4741 ggctggccgg tattggtgat tgggcaggtg gaagcggacg atgtgatcgg cacgctggca
     4801 aaacaggggg cggaacatgg tttgcgagtc attgtttcga ccggcgataa ggacatggcg
     4861 cagttggtgg atgagcgcgt tacgctggtg aacacgatga gcggagaaac gctggatatt
     4921 gaaggcgtga aggcaaaatt cggcgtgcgc cccgaccaaa tccgcgatta tctcgcgctg
     4981 atgggcgaca aggtggacaa cgtgccgggc gtggaaaaat gtggcccgaa aacggcagtg
     5041 aagtggctgg aagcctacgg ctcgttgcaa ggcgtgatag aacacgcttc ggaaatcaag
     5101 ggcaaagtgg gcgagaatct gcgtgccgcc ctgccgcgcc tgccgctgtc gtatgatttg
     5161 gtaacgatta aaaccgatgt ggacttgcac gccgagcttt cagacggcat cgaaagcctg
     5221 cgctgtacta cgccgaaatg ggcgcagctg gttgtcgatt tcaaacgctg gggcttccgc
     5281 acctggctga aagaagcgga aagccgtatg cacgaagcgg cggacggcga tttgttcggc
     5341 agcgatacga taggcgaaca ggcggcgttg gatatggaaa cgtcgtctga aaggctacct
     5401 gaaaaagccg ttgcccccga aaagctggat tatcaggccg ttaccaccga agcgcagttt
     5461 gccactttgt tagacaaatt gtcgcaggcg gaaaaaatcg gcatcgacac ggaaaccact
     5521 tccctagacg cgatgaacgc cgcgctggtc ggcatcagca tcgcgttcca agcgggcgaa
     5581 gcagtttaca tccccgtagg acacagcctg accgccgcgc cagaacagct tgatttgcaa
     5641 gacgtattag gccatctgaa accgtatttg gaaaatcctg ccctgaaaaa aatcgggcaa
     5701 aacctcaaat acgaccaaca cgttttcgcc aattacggca tcgccctgaa cggcatcgcc
     5761 ggcgacgcca tgctcgcttc ctacatcatc gagagccatc tcggacacgg cttggacgaa
     5821 ttgtccgaac gctggctcgg cttggaaacc attacctacg aatcgctgtg cggcaaaggc
     5881 gcgaagcaaa tcggttttgc cgatgtcgcc atcgggcagg cgaccgaata cgccgcccaa
     5941 gacgccgatt tcgccctgcg cctcgaagcg cacctgcgcg cgcaaatgga cgaaaaacag
     6001 cttgaaatgt atgaaaaaat ggagctgccc gtcgcgcagg tattgtttga aatggaacgc
     6061 aacggtgtgc aaatcgaccg cgccgaactc gcccgccaaa gcgcggaact cggcgccgag
     6121 ctgatgaagc tcgaacaaga agcctacgcc gccgcagggc agccgttcaa cctcaactcg
     6181 cccaaacagc tgcaagaaat cctgttcgac aaaatgggca tcccgacaaa agggctgaaa
     6241 aaaaccgcca agggcggcat ttccaccaac gaggccgtgc tcgaacagct cgcgcccgac
     6301 taccccctgc ctaaaatcat cctgcaaaac cgcagcctgg cgaagctcaa atccacctac
     6361 accgacaaac tacccgaaat gatttccccc aaggacggcc gcgtgcatac cacctacgcc
     6421 caagccgtcg ccattaccgg ccgcctcgcc agcaacaacc ccaacctgca aaatatcccc
     6481 atccgtaccg aagaagggcg taaagtccgc cgcgccttta ccgcaccgca aggcagcgtc
     6541 atcgtttccg ccgactattc ccaaatcgag ctgcgcatta tggcgcacct ctccggcgac
     6601 aaaaccctga ttgccgcgtt ccaaaacggc gaagacgtac accgccgcac cgccgccgaa
     6661 gtgttcggca ctgcgcccga aaacgtctcg tccgagcaac gccgctatgc caaaaccatc
     6721 aacttcggct taatttacgg tatggggcaa tacggtttgg caaaatcatt gggcatcgac
     6781 aacctttccg ccaaaaactt tatcgaccgc tacttcgacc gctaccccgg cgtcgccgaa
     6841 tacatgcagc gcaccaaaga acaagccgcc gcccaaggct acgtcgaaac cctgttcggc
     6901 agaaggctct acctgcccga catccgcaac aaaaacgcca acgcccgcgc cggagccgaa
     6961 cgcgctgcca tcaacgcccc catgcagggc accgcctccg acctcatcaa acgcgccatg
     7021 atagacgtgt cccgctggct ttcagagtgc gaagcctccc cgtgggacga actcttacaa
     7081 agcaaactga ttatgcaggt gcatgacgaa ctggtgctgg aagtcgttga aaccgaactg
     7141 gattttgtca aagaaaaact gccgcagatt atggcgaaag tggacggcgg attattggat
     7201 gtaccgctgg tggctgaggt tggcgtaggg gagaattggg aagaggcaca ttgattgaaa
     7261 ggtgttatat gctatcttta tttaaataaa atttaatttt tggtatattt tttctaaatg
     7321 ttccta
//
LOCUS       DAXHRP010000104         7200 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.104, whole genome shotgun sequence.
ACCESSION   DAXHRP010000104 DAXHRP010000000
VERSION     DAXHRP010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7200
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.104"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(60..144)
                     /locus_tag="ACFM72_001515"
     tRNA            complement(60..144)
                     /locus_tag="ACFM72_001515"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(108..110),aa:Leu,seq:caa)
     gene            420..1073
                     /locus_tag="ACFM72_001516"
     CDS             420..1073
                     /locus_tag="ACFM72_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HFC6258066.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1152..1805
                     /gene="hisG"
                     /locus_tag="ACFM72_001517"
     CDS             1152..1805
                     /gene="hisG"
                     /locus_tag="ACFM72_001517"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HFC6258067.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1909..2808
                     /locus_tag="ACFM72_001518"
     CDS             1909..2808
                     /locus_tag="ACFM72_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HFC6258068.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLDEINSNELILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2805..4094
                     /gene="hisD"
                     /locus_tag="ACFM72_001519"
     CDS             2805..4094
                     /gene="hisD"
                     /locus_tag="ACFM72_001519"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HFC6258069.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4140..5237
                     /gene="hisC"
                     /locus_tag="ACFM72_001520"
     CDS             4140..5237
                     /gene="hisC"
                     /locus_tag="ACFM72_001520"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HFC6258070.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGRIPNLIVLRTL
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALRHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5234..6151
                     /gene="hisB"
                     /locus_tag="ACFM72_001521"
     CDS             5234..6151
                     /gene="hisB"
                     /locus_tag="ACFM72_001521"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HFC6258071.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6246..7115
                     /locus_tag="ACFM72_001522"
     CDS             6246..7115
                     /locus_tag="ACFM72_001522"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC6258072.1"
                     /translation="MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
BASE COUNT         1880 a         2117 c         1723 g         1480 t
ORIGIN      
        1 gtcttatcta tttcattaaa cagcaataga caaaaaaata atcgctccaa aagcggttgt
       61 ggtgcccagg gtcggactcg aaccgacaca cctttcggcg ggggattttg agtcccctgc
      121 gtctaccaat ttcgccacct gggctggtga agaagtcgtc attataatgg cttttgaaat
      181 tctgtaaacc tttttttgaa attattttat ctgtttttat tttatttttg attttaaata
      241 gaatttttat tattttaatc ttactgttct ttccgttcca aagattctgt atgattcggc
      301 aattcctgcc gtgcagacaa cgtaaaaaaa tactacatta aatctgccaa acgcgttaag
      361 atggaaatat tcaaattccg tacgaatcag gttttgctat ttattcttgg gagattgtca
      421 tgttttccgt accgcgttcc tttttgccgg gcgttttcgt acttgccgcg cttgccgcct
      481 gcaaacctca agacaacagt gcggcgcaag ccgcttcttc aagtgcatcc gcgtcggctg
      541 cggaaaatgc ggcaaagccg caaacgcgcg gtacggatat gcgtaaggaa gacatcggcg
      601 gcgatttcac gctgaccgac ggcgaaggca agcctttcag cctgagcgat ttgaaaggca
      661 aggtcgtgat tctgtctttc ggctttacgc actgtcccga tgtctgcccg acagagcttt
      721 tgacgtacag cgacacgttg aagcagttgg gcgggcaggc taaggacgtg aaagtggtgt
      781 tcgtcagcat cgatccggaa cgcgacacgc ctgaaatcat cggcaagtat gccaaacagt
      841 tcaatccgga ctttatcggt ctgacggcaa cgggcggcca aaacctgccg gtcatcaagc
      901 agcaataccg cgtggtttct gccaaagtca atcaaaaaga cgacagcgaa aactatttgg
      961 tcgaccactc ttccggtgcg tatctcatcg acaaaaacgg tgaggttgcc attttctcgc
     1021 cttacggaag cgagccggaa acgattgctg ccgatgtaag gaccctgctc tgataaaacc
     1081 gtatgccgtc tgcaccgtcg gcgcctgttc agacggcatt attgtttcaa ccgacaaagg
     1141 acatccacac catgcaggat aatgctttga ccatcgcctt atccaagggg cgcatttttg
     1201 aggagacgct gccgctgctt gccgctgccg gcattgttcc gactgaagag cctgaaaaat
     1261 cgcgcaagct gattatcggg acgaaccatg aaaacatccg ccttgtcatt gtccgcgcaa
     1321 ccgatgtgcc gacttatgtc cgctacggcg cggcggactt cggcattgcg ggcaaagacg
     1381 tgctgatcga acacggcggc acggggcttt accggccttt ggatttggag attgccaagt
     1441 gccgcatgat ggttgctgtg cgtaaagggt ttgattacga agcagcttcg caacccggat
     1501 gccgtctgaa gattgccacg aagtatcctg aaatcgcggc atctcatttt gccggcaagg
     1561 gtgtccatgt ggacattatc aaactgtacg gctcgatgga acttgcgccg ctggtcggct
     1621 tgagcgatgc gattgtggac ttggtttcga cgggcaacac cttgaaggca aacggcttgg
     1681 aagcagtcga acacatcgtc gacatttcca gccgcctggt ggtcaacaag gctgctttga
     1741 aaacgaaata cgcgctgctg gagccgatta ttcaggcgtt cggcggcgca gtgaaggcga
     1801 agtaagcatt catttgaata aagatgcgtt ttcagacgac cctatccgtt cccgccgaca
     1861 ggtcgtctga aaatatcacc ggcagtaaac tgtataggag aagttaaaat ggttgcaaaa
     1921 ataaaaaaat tctcagattc aaccctttcc gttttgaata acggcgagcg tcggttttat
     1981 gtctattgtc tgaccgacct gaaaaaagac aaaatcctct acatcggcaa aggctgcggt
     2041 aatcgtatct tcgagcatga atgggttgct agtcgttcac aagacccagt ctccggcgag
     2101 attatcgatc ggaaactcaa agccatctcc aaatgcaaga aactcggtcg ctatatcatc
     2161 agctatcatc tgactgaagt cgaagcgctc gccgccgaat ctgccttaat tcattttgtt
     2221 aaatctgtct tgggtaaaaa actcaaaaat aaaattgccg ggcatggtcc gggtggtatt
     2281 agcgtagaag aactagatcg ccgctttgga ttctcttctc tcccacttga tgagatcaac
     2341 tccaacgagc taattctcgc catcaaaatc cacaatgctt tcgatttaga tactgacgaa
     2401 gaattagact accttttcga caaccaagac gatgccaacc tcaaatcgcg tacgttgggc
     2461 aactgggtta tcggtaaaga tgttgcttca aaagtgaaat acgttatcgg cgttcacacc
     2521 ggtctgcaaa acgctgttgt cagtgcatac gaagtggacg gttttgaaac aatggttgag
     2581 gaaaccaaaa acggtagaaa acaatcccgt taccgtttcc gcactacctc tcgtagcgaa
     2641 gaggtattag ccaaactcgg tctgcaacaa aaatgcctgc ccgaattgaa gtttggtagc
     2701 gggggagaaa aagcgtatat cagacccaaa acagagacag aaactgaaca agagaatatt
     2761 cagacgaccc ccaatccaaa aataaaaaag gaaaaaacca aatcatgaaa aaactcaaca
     2821 cccaatcgcc cgatttccaa gccggactca aagccctgct ggcttttgaa accgcgcaaa
     2881 accccgaaac cgaacgcatc gtcgccgaca tttgcgccga cgtgcaaaag cgcggcgatg
     2941 cggctttgat tgaatacacc aacaaattcg atcagacaaa cgctaaaagc atcgatgatt
     3001 taatactcac gcaagccgat ttgaacgcgg cgttcgagcg cattccgaac gacgttcaga
     3061 cggcattgca gaccgccgcc cgccgtgtcg aaagctacca ccaacgccaa aaaatggaat
     3121 cgtggagcta caccgatgaa gacggcacgc tgttgggaca acaaatcaca ccgcttgacc
     3181 gcgtcggcat ttacgtcccc ggcggcaagg cggcgtatcc gagttccgtc atcatgaacg
     3241 ccatgcccgc ccacgtcgca ggtgtgaaag aaatcatcat ggtcgtgccg acaccaaaag
     3301 gcgaacgcaa cgacatcgta cttgccgccg catacgtcgc cggcgtaacc aaagtcttca
     3361 ccgtcggcgg cgcgcaggcg gttgccgccc tcgcctacgg cacggaaacc atcccccaag
     3421 tcgataaaat caccggtccg ggcaacgcct tcgtcgccgc cgccaaacgc cgcgtgttcg
     3481 gcgtggtcgg catcgacatg gtggcggggc cgtctgaaat cctggtcatc gccgacggca
     3541 cgacacctgc cgattgggtg gcgatggatt tgttcagcca ggccgaacac gacgaaattg
     3601 cccaagccat cctcatcggc acgtcgcaag cgtatctcga cgaagtagaa gccgctatgg
     3661 accgcctgat cgaaactatg ccgcgccgcg acatcatcga agcctcgctc ggcaacaggg
     3721 gcgcgatgat actcgccaaa gacttggacg aagcctgcga aatcgccaac tacatttccc
     3781 ccgaacactt ggaactgtca gtcgaaaacc cgcaggaatg ggcgaaaaaa atccgccacg
     3841 ccggtgcgat tttcatggga cgctacaccg gcgaaagcct cggcgactac tgcgccggtc
     3901 caaaccatgt gttgcccacc agccgaaccg cccgcttttc ctcgcctttg gggacatatg
     3961 atttccaaaa acgctccagc ctgattcagg tttcggaaca gggcgcgcaa aaattaggcg
     4021 aaaccgccag cgtgctggca cacggcgaaa gcctgaccgc ccacgcccgc gcggcagagt
     4081 tccgtatgaa ataatgccga aacggcgtac aggcatattc caaccattaa ggaaacacga
     4141 tgaaatccgt ccgctccttc atccgcgacg acatacaagc tatgtcggca tatcagattg
     4201 ccgacgttcc gcccggcttt gccaaactcg attcgatgga aagtcccgtc cacccttttg
     4261 ccggacatga aacgctgttg caggaatggc aggcacggct tgccgccgcg cccatccatc
     4321 tttaccccaa tccctccggc agcggtttac aggaagcatt acgttcggcg ttcgacattc
     4381 ccgactgcgc cgacatcgcg ctgggcaacg gttcggacga actgatacag ttcatcacga
     4441 tgctgaccgc caaaccgggc gcggcaatgt tggcagccga acccagtttc gtcatgtacc
     4501 gccacaacgc cgcgctgtac ggcatggatt atgtcggcgt tccactgaac ggagatttca
     4561 ccctcaacct gcccgccgtc ctcgaagccg tcaggaaaca ccgccctgcc ctgaccttta
     4621 tcgcctaccc caacaacccc accggcgtat gcttcacgcg tgccgaaatc gaagccgtca
     4681 tcgaagcttc agacggcatc gtcgtcgtcg atgaagccta cggcgcattc aacggcgaca
     4741 gcttcctgcc gcaggcaggc aggattccca acctgatagt cttacgcacc ctcagcaaaa
     4801 tcggttttgc cggactgcgt atcggttatg cggcaggctg ccccgaagtc atcggcgaac
     4861 tgcaaaaaat cctgccgccc tacaatatga accaattgag cctgaccact gccaaactcg
     4921 ccctgcggca ctacggcatt atctctgcca acatcgacag cctgaaaaac gaacgcgaac
     4981 ggatgttcgc cgaattgggc aaaatatgcc gtctgaacac ctttccaagt caggcaaact
     5041 tcattaccat acgcgtaccc gatgccgatt tgttgtttga cacgctcaaa caaaaccgca
     5101 tcttggttaa aaaactgcat ggcgcgcacc cgcttttgga acactgcctg cgcattaccg
     5161 taggcagccc cgcacaaaac gatgccgttc tcaacatcat tcgccaactt tactgccaac
     5221 caacggattt cctatgaatt tgactaaaac acaacgccaa ctgcacaact ttctgaccct
     5281 cgcacaagaa gcaggttcgc tgtccaagct cgccaaactc tgcggctacc gtacccccgt
     5341 cgcactctac aaactcaaac aacgccttga aaagcaggca gaagacccag atgcacgcgg
     5401 catccgtccc agcctgatgg caaaactcga aaaacacacc ggcaaaccca aaggctggct
     5461 cgacagaaaa caccgcgaac gcactgtccc cgaaaccgcc gcagaaagca ccggaactgc
     5521 cgaaacccaa attgccgaaa ccgcatctgc tgccggctgc cgcagcgtta ccgtcaaccg
     5581 caatacctgc gaaacccaaa tcaccgtctc catcaacctc gacggcagcg gcaaaagcag
     5641 gctggatacc ggcgtaccct tcctcgaaca catgatcgat caaatcgccc gccacggcat
     5701 gattgacatc gacattagct gcaaaggcga cctgcacatc gacgaccacc acaccgccga
     5761 agacatcggc atcacactcg gacaagcaat ccggcaggca ctcggcgaca aaaaaggcat
     5821 ccgccgttac ggacattcct acgtcccgct cgacgaagcc ctcagccgtg tcgtcatcga
     5881 cctttccggc cgccccggac tcgtgtacaa catcgaattt acccgcgcac taatcggacg
     5941 tttcgatgtc gatttgtttg aagaattttt ccacggcatc gtcaaccaca gtatgatgac
     6001 cctgcacatc gacaacctca gcggcaaaaa cgcccaccat caggcggaaa ccgtattcaa
     6061 agccttcggg cgcgccctgc gtatggcagt cgaacacgac ccgcgcatgg caggacagac
     6121 cccctcgacc aaaggcacgc tgaccgcata aaaaaccata ccgtctgaaa cacccgcagg
     6181 cttttcagac ggtatcggaa cagataagat tacactacac tacaaacaga aaaggagtaa
     6241 acatcatgtc cgcaaacgaa tacgcacaaa tcggctggat aggcttaggg caaatgggtc
     6301 tgcctatggt aacgcggctc ttggacggcg gcatcgaagt cggcgtatac aaccgctcgc
     6361 ccgacaaaac tgcccccatc tccgccaaag gcgcaaaagt ttacggcaac accgccgaac
     6421 tcgtccgcga ctatcccgtc attttcctga tggtttccga ctatgccgcc gtgtgcgaca
     6481 tcctgaacgg agtccgcgac ggattggccg gcaaaatcat cgtcaacatg agcaccatct
     6541 ccccgaccga aaacctcgcc gtcaaagcac ttgtcgaagc cgcaggcgga cagtttgccg
     6601 aagcacccgt ttccggatcg gtcgggcccg ccaccaacgg cacgctgctg attctgttcg
     6661 gcggcagcga agccgtttta aacccgctgc aaaaaatatt ttccctcgtc ggcaaaaaaa
     6721 ccttccattt cggcgatgtc ggcaaaggtt cgggcgcgaa actcgtcttg aactcgctct
     6781 tgggcatttt cggcgaagcg tacagcgaag cgatgctgat ggcgcggcag ttcggcatcg
     6841 ataccgacac catcgtcgaa gccatcggcg gctcggcaat ggactcgccc atgttccaaa
     6901 ccaaaaaatc cctgtgggca aaccgcgaat tcccgcccgc cttcgccctc aaacacgcct
     6961 ccaaagacct caacctcgcc gtcaaagagc ttgaacaggc aggcaacacc ctgcccgccg
     7021 tcgaaaccgt tgctgccagc taccgcaaag cagtcgaagc cggctacggc gaacaggacg
     7081 tttccggcgt ttacctgaaa ctggcagaac actgattgcc ttttccaaac acaatgccgt
     7141 ctgaacatat ttcagacggc atttttatca ccccacgctt aaaatcagtc ccgattatga
//
LOCUS       DAXHRP010000105         7148 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.105, whole genome shotgun sequence.
ACCESSION   DAXHRP010000105 DAXHRP010000000
VERSION     DAXHRP010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7148
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.105"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            152..1090
                     /locus_tag="ACFM72_001523"
     CDS             152..1090
                     /locus_tag="ACFM72_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HFC6258073.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            1219..1512
                     /gene="hfq"
                     /locus_tag="ACFM72_001524"
     CDS             1219..1512
                     /gene="hfq"
                     /locus_tag="ACFM72_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HFC6258074.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            1597..2163
                     /locus_tag="ACFM72_001525"
     CDS             1597..2163
                     /locus_tag="ACFM72_001525"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC6258075.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            2217..2591
                     /locus_tag="ACFM72_001526"
     CDS             2217..2591
                     /locus_tag="ACFM72_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HFC6258076.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRVFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            2601..3095
                     /gene="folK"
                     /locus_tag="ACFM72_001527"
     CDS             2601..3095
                     /gene="folK"
                     /locus_tag="ACFM72_001527"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HFC6258077.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(3220..3699)
                     /locus_tag="ACFM72_001528"
     CDS             complement(3220..3699)
                     /locus_tag="ACFM72_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HFC6258078.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDCKDNAYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVFQI"
     gene            complement(3919..4656)
                     /gene="ubiE"
                     /locus_tag="ACFM72_001529"
     CDS             complement(3919..4656)
                     /gene="ubiE"
                     /locus_tag="ACFM72_001529"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HFC6258079.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGRLIAKDAESYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(4699..5067)
                     /locus_tag="ACFM72_001530"
     CDS             complement(4699..5067)
                     /locus_tag="ACFM72_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HFC6258080.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            5187..6806
                     /gene="mnmC"
                     /locus_tag="ACFM72_001531"
     CDS             5187..6806
                     /gene="mnmC"
                     /locus_tag="ACFM72_001531"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HFC6258081.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPTFVRALLSHPLIGLHEDTPLTDISHDGEKWIASTPNGTFTATHIIYCTGAHSSC
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAQLSPALAESLFAANPNPQKYQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAVAAEILG
                     LPHPLSKRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(6920..7037)
                     /locus_tag="ACFM72_001532"
                     /pseudo
     CDS             complement(6920..7037)
                     /locus_tag="ACFM72_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT         1907 a         2229 c         1446 g         1566 t
ORIGIN      
        1 ttccgattta aaaacagaat gttataaaac ccaatcccca aaacacaaca agaccgcccg
       61 cctacgggca gtctcctgtc agacgacata ctttacagat ggctgttttt tcaacaaaat
      121 aacgccaata ctcaaaaata tggaatcaaa aatgtccatc catactctga aacgcctgcc
      181 ctcatcgctg ctgctcggtc tctgcctttc cctgccgtca gcccaccttt ttgccgacaa
      241 cgacatttta gggcaatttt tagaacagaa catgcttacc tcctccgatc cgatagaaat
      301 attcgccgaa agcacgatac accccaccaa cacccaagcc attacaggcg gtctgattct
      361 ctcctcacaa tctgccctgg tcgtcaacaa caaaaccgga cagatactgt atcagaaaaa
      421 cgccgacagg attatgccca tcgcctccat ttccaaactg atgagcgcga tggtcgtttt
      481 ggatgcaaac ttggacatga acgaaaccgt taccattacg cccgacgaaa tcgaccgcat
      541 caaagggacc ggcagccgtc ttgccatagg tacggcactt acacgcaaag aactgctgca
      601 cctgagcctg atgagcagcg aaaaccgcgc cacccatgca ttgggcagaa cctaccccgg
      661 cggcatgggc gcatttgtcg ccgccatgaa ccgcaaagcc caaagcctcg gtatgtacgg
      721 cagccgcttt tacgaaccga ccggactcaa cttccaaaac gtttctaccg ccaaagactt
      781 gagccttatg gtcaacgccg ccgcccaata tccgcaaatc cgcaccaact cgacttccaa
      841 ctacgcctcg gtacagacca aaaacgggca gcagaactac aaaaactcca atgccctggt
      901 cagagaaggc atgtggaaca tcgaattgca gaaaaccggc tacatacgcg aagcaggcag
      961 gtctatggtt gtcaaagcca acattcaaaa tcaacccgtt accatcgtat tgctgaactc
     1021 gcccacatcc gccacacgcg tcaacgacgc ccgcaaaatc gaatcgtgga tgctgcagca
     1081 acgctcctga catacaaatg cccggcggaa aaccgcccaa acacaaaaaa aattggtaat
     1141 ttttcctatt caaggctaca attcgacacg cacagggcat ctgcccgatt tcacaatcat
     1201 aatagcggag ttaaaaatat gacagctaaa ggacaaatgt tgcaagatcc cttcctgaac
     1261 gccctgcgta aagagcatgt tccggtttcg atttacttag ttaacggtat caaattacaa
     1321 ggtcaggttg agtctttcga tcaatacgtt gttctcctga gaaacacttc cgtcacccaa
     1381 atggtttaca aacacgccat ttccaccatc gtaccggcac gctccgtcaa cctacaacat
     1441 gaaaacagac cccaagccgc accgacttcg accctcgtcc aagtggaaac cgtccagcag
     1501 cctgccgaat aatccgcacg aagcatgacg tgtcatatct ttcaatacct taccggacaa
     1561 cggtaaggta tttttatttt cagacagcat ttaaaaatgt tattgcaaaa catccttcca
     1621 ttcgcccatt gccttttgcg gaaggcactt cccgaaggtg gcaatgcttt ggacggcacc
     1681 gccggcaacg gacacgacac ccttttcctc gcacaaaccg caggcatccg ggggaaagtg
     1741 tgggcattcg acatccagcc gcaagccctg agccgcactc gatgccgtct gaaagaagcg
     1801 agatacgaga atgtgcaact catcttagac ggacacgaaa acctgaaaca atatgtttca
     1861 gaaccactaa atgccgccat tttcaacttt ggctggctgc ccggcggaga taaaagcctt
     1921 accacccata cggaaaccag cattcccgcc ctttgcgcaa ccctctccct gctgaaagaa
     1981 ggcggtatgc ttattgccgt cctctatccg ggacacgaaa acggcaaaca ggaggcagaa
     2041 gcaatcgaac aatgggcaaa aaacctgcct caagaacagt ttgccgtttt gcgttacggc
     2101 tttaccaacc ggaaaaacaa cccgccctat ctgttggcat ttgaaaagtt acgtcaaaaa
     2161 taaatgtttg cggtaaaata agccgattct aacccttatt ttgatacgag ccgaccatgc
     2221 agtatctgat tgtcaaatac agccatcaaa tcttcgttac catcaccatt ttggtattca
     2281 acatccgtgt tttcctactt tggaaaaatc cagaaaagcc cttggtcggc ttttggaagg
     2341 cactgcccca ccttaacgac accatgctgc tgtttacggg attgtggctg atgaagatta
     2401 cccatttctc cccgttcaac gcgccttggc tcggtacaaa aatcctgctt ctgctcgcct
     2461 atatcgcatt gggtatgatg atgatgcgcg cccgtccgcg ttcgaccaag ttctacaccg
     2521 tttacctgct cgccatgtgt tgcgtcgcct gcatcgttta ccttgccaaa accaaagtcc
     2581 tgcctttctg aaacaccgtt atgaacaaca gacattttgc cgtcatcgcc ctgggcagta
     2641 atcttgaaaa ccctgcccaa caggtacgcg ccgcattgga cacgctgtcg tcccatcctg
     2701 acatccgtct taaacaggct tcctcactgt atatgaccgc gcccgtcggt tacgacaatc
     2761 agcctgactt tgtcaatgcc gtctgcaccg tttccaccac cttggacggc attgccctgc
     2821 ttgccgaact caaccgtatc gaggctgatt tcggacgcga acgcagcttc cgcaacgcgc
     2881 cgcgcacatt ggatttggac attatcgact ttgacggcat ctccagcgac gacacccgac
     2941 tcaccctgcc gcatccgcgc gcgcacgaac gcagtttcgt catccgccct ttggcagaaa
     3001 tcctccctga ttttgtttta ggaaaacacg gaaaggttgc cgaattgtca aaacggctgg
     3061 gcaatcaagg tatccgtctt ttaccggaca ggtaattccg cacgcggatg ccgtctgaaa
     3121 gcctttcaga cggcattttt cctttgccgc caacacgcgt gcaaaaaaat cgccccttgg
     3181 aaaaggggcg caaaaggaac acaaaccact accaaaactt taaatctgaa acactgcctg
     3241 ccgcatactg tatccgacag gatataaagc cctcactaaa tcgtttcgag aaatccaaac
     3301 ttcttcatcg ccgacagaaa atctgccttt ctccggtacc agctccaaca gaaacggttg
     3361 aaccgccgta tgcagcctgt ccttacaccg ccccagcttt ctggacaacg cggacagggc
     3421 gcgtttgtag gcattatcct tgcagtcaag ctcccgcgca ctgccgaccc agctcaaacg
     3481 aaggttgcgg ctttcatcct caatcagcaa aatgcctgtt ttgacttccc ccacctcggg
     3541 ctcgcatgaa agcgcaatat aatatttgcc gtcgatgttg acatacgccg cttcatgcac
     3601 ctgacagttg cagccggaag tggcaagcag cgaataaaca gaatcccgat gcagtttcaa
     3661 aatatcaagg gaaatctgtt tgaaaatact ttccggcatt tttccctcct ttcgtctgct
     3721 gcgttgttta ctggattgac tgcattatac agacatctcc caatcttgca aatgataatt
     3781 gttcctattt tttaaaaaat ttataaatta ttgatggata tgtgaattaa ttttaagatt
     3841 taaaatctct ttctcaaaaa aacacaaaaa tgccgtctga aacgtgttca gacggcattg
     3901 gctgcacagc cagtccgttt aaaatttcac gcccttatgc agcgcgacaa tgcccgcact
     3961 catattgtga taatccacgc tgtcgaagcc cgcatccagc atcatctgtt tcaaagtttc
     4021 ctgatcgggg tgcatacgga tggattcggc aagatactgg taactctccg catctttcgc
     4081 aatcagcctg cccatgaccg gcagcagctt gaacgaatag aaatcatacg cgccttccaa
     4141 aggtttgtag attttggaaa actccaacac cagcaacgtg ccgcccggtt tcaaaacacg
     4201 gtacatctct ttcagcgcgg catctttatg cgtcatgttc cgcaagccga acgccacgga
     4261 aaccaagttg aaataattgt cggggaaagg cagtttttcc gcatcggcaa gcgatacggg
     4321 caaaatcatg ccttcgttca acagacggtc gcgcccgacg gtcagcatag aggaattaat
     4381 atcggtcagc caaacctcgc cttccttgcc gacccgtttc gcccaaccgc gcgacaaatc
     4441 gcccgtaccg cccgcaatgt ccaacacttt atcgcctttt ttcaggtgcg ccgtgttgat
     4501 ggtgaaatgc ttccacaccc tgtgcagccc tgccgacatc acatcgttca taatgtcgta
     4561 gtttttggcg acggagtgga acacttccgc cactttgccg gctttttcat cttcgttgac
     4621 cgtactgaac ccgaaatgcg ttttttgtcc gcccatattc taaccacctc tctgataccg
     4681 ccctacggca tcccaaactt aacaatctga ttgcttttca aaacgggaag cacccgccgc
     4741 cgccaatttg tccaaatatt cctgccacat cgcatcgtat ccgtatgcca gtctgtgcag
     4801 atacgcccaa tcgtaaagac cgctgtcgtg cccgtccgaa aaactgattt tcagcgcgta
     4861 ctgtccgaca ggctgcaaat ccgtgatttg gacatccgcc ttgccggtct gcaaaacatc
     4921 ctgtcccaca ccgtgtccgc gcacttccgc actcggcgaa tagacgcgta aaaattcggc
     4981 aggcagattt ttaggttcgt ccccataagt caaaaccaac acggtacggt ttttcaacaa
     5041 acggatttca acaggaatat tattcaaaaa acacctcggt tcggcataca atatccggca
     5101 ggcgcaggcg tgccttcaaa cggcgcgtat tttaacagct ttatcccgat accgatattc
     5161 aaacccacat ttcagacggc attgatatgg acaatctcgt atgggacggc gttcccgaca
     5221 tccgcacact cgaccaaacc atccgcaaac acgcacaccc gctcaacctg attgtctgcc
     5281 tccccgataa tcagattccc gattttcaaa ccgcacaaga tgcttcggac gcggaatgcc
     5341 gtctgaagca ccgtttggat caggcaacgc agtgcctcca gttcgacagc atcaacctca
     5401 tcgaacacat cctgcccgat gtccgcttct ggctggttcc cccttcacgc acccgccgcc
     5461 tgcacgaaca cttccaccac atttcctggc agaccgaagc catcccgcaa accgaaagca
     5521 aacccgacaa accctggttt gcacttccac aaacatccga acggcaaaaa ccggaacaca
     5581 tcctcgttat cggagcgggc atatccggcg cggcaaccgc ccacgcctta gcatcacacg
     5641 gcatttccgt taccgtattg gaagcccgaa aagccgccca agccgccagc ggcaaccgcc
     5701 aagggctgct ctacgccaaa atctcgccgc acgacaccga acaaaccgaa ctgctgcttg
     5761 ccggctacgg ctacaccaaa cgcctgctcg gacatatcct gcccgaatcc gaaacctggg
     5821 gcggcaacgg catcatccac ctcaattaca gccgcaccga acaacaacgc aatcacgaat
     5881 tgggtttgca aaaacaccat aaccacctct accgcagcat cacgcaggca gaagccgaaa
     5941 aaatcgccgg tatcccactg tccgtcccat acgaccaccc ttcatgcgga ctctactggc
     6001 aacacggcgt atggctcaat cctcccacat tcgtccgcgc cctcctcagc catccgctga
     6061 tcggactgca cgaagacaca cccttgaccg acatttccca cgacggggaa aagtggattg
     6121 caagcacgcc aaacggcaca tttaccgcca cacacatcat ctactgcacc ggcgcgcaca
     6181 gctcctgcct gcccgaaacc aacctcgccg ccctgcctct caggcaaata cgcggacaaa
     6241 ccggcctcac accatccacc ccgttttccg aacaactgcg ttgcgccgtt tcaggcgaaa
     6301 gctacatcag cccgtcgtgg cacggactgc actgctacgg cgcgagtttt attcccaaca
     6361 gcagccatac cggatggaac gaagccgaag aagcctcaaa ccgccaagca ttggcacagc
     6421 ttagccccgc cctcgccgaa tcattgtttg ccgccaaccc aaacccccaa aaataccaag
     6481 ggcacgccgc catacgctgc gacagccccg accaccttcc cctagtcggc gcactcggcg
     6541 acattgccgc catgcggcag acctacacca aactcgcgct ggacaaaaac taccgcatcg
     6601 acaccccatg cccatacctg cctaatgcct acgtcaacac cgcccacggc acacgcgggc
     6661 ttgccaccgc ccccatctgc gccgccgccg ttgcagccga aatcctaggc ttgccccatc
     6721 ccctctcaaa acgcctgcgc cacgccctac accccaaccg caccatcatc cgcgccatcg
     6781 tcagaaggaa ggatctaacc ccttaagcct ttgccgcatg ccgtcccgac cacagaaaat
     6841 catattcaaa taaacatacc aatcctgacg gtaaaatatc gaaaacaccc ataacgtttt
     6901 cttcccaaaa taaggagtaa ggaatgccta acaaattgcc tttgctgtcc aagatgaatg
     6961 ttccgtaaca ttcgaagact tccttaaccc tgccagccgt ttcggtttct gtaccccctg
     7021 ttagataagg aaggaatgaa aaagccctgt tgattgtatg aagtaaaggg cgttaatttt
     7081 tgttaatctt cccttctcag gaactcaata tataaggatg ttaattttta tttcccttct
     7141 cgaggact
//
LOCUS       DAXHRP010000106         7127 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.106, whole genome shotgun sequence.
ACCESSION   DAXHRP010000106 DAXHRP010000000
VERSION     DAXHRP010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7127
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.106"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(254..2050)
                     /locus_tag="ACFM72_001533"
     CDS             complement(254..2050)
                     /locus_tag="ACFM72_001533"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HFC6258082.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLTAKNIRIEHPNDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVAGKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2508..3761
                     /locus_tag="ACFM72_001534"
     CDS             2508..3761
                     /locus_tag="ACFM72_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC6258083.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3767..3919
                     /locus_tag="ACFM72_001535"
     CDS             3767..3919
                     /locus_tag="ACFM72_001535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258084.1"
                     /translation="MPSETANRFQTALPRLWKKMPTSRKIRANFVIRSGRLKQIAPDL
                     FFRKTL"
     gene            3916..5427
                     /gene="lysS"
                     /locus_tag="ACFM72_001536"
     CDS             3916..5427
                     /gene="lysS"
                     /locus_tag="ACFM72_001536"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HFC6258085.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEILDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIVDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5504..5692)
                     /locus_tag="ACFM72_001537"
     CDS             complement(5504..5692)
                     /locus_tag="ACFM72_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HFC6258086.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPKISRMLSSILAGYAWDTENPFVAK
                     SEQRLSALSEWVGQLETE"
     gene            complement(5696..6574)
                     /locus_tag="ACFM72_001538"
     CDS             complement(5696..6574)
                     /locus_tag="ACFM72_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HFC6258087.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNRSVADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEAFDLPEGSVIFGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
     gene            complement(6604..>7127)
                     /locus_tag="ACFM72_001539"
     CDS             complement(6604..>7127)
                     /locus_tag="ACFM72_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6258088.1"
                     /translation="NGRTGRILNSLLLIDKGLLDLPILYLSRYIIENRADYYRLLLGV
                     TERQDWESWIIYILDGVADTADWTVAKIDAIRRLFEQTRQHIRTHAQGIYTHELVNLL
                     FEQPYTRIANLEAAGIAKRQTASKYLKELSDIGVLQEIAIGRDKLFIHPRLMELLRGE
                     GNSFTSFQSLVKA"
BASE COUNT         1545 a         1848 c         2024 g         1710 t
ORIGIN      
        1 cggaatatag cggattaaca aaaaccagta cggcgttgtc gcgccttagc tcaaagagaa
       61 cgattctctc aggtgctgaa gcaccgagtg aatcggttcc gtactattcg tactgtctgc
      121 ggcttcgtcg ccttgtcctg atttttgtta atccactata tttgcttgcg gcaagatgaa
      181 aacggtgcgg gatgttttgg gaaaccaatg ccgtctgaag ggctttcaga cggcattttt
      241 tgcgccgtgc tgtttaacgc gccagcggtt cggtgcgttt gatcagccac gcttttgccg
      301 cgccttcggt cagcggctcg aggcggcggc ggacttcggc gtggtagcgg ttgacccagt
      361 cgatttcgcc gtcggtcatg agggcggtgt ccatcaggcg ggtgtcgatg gggcagaggg
      421 tcagggtttc aaaacagagg aagctgccga attcggtttc ttgaggggcg gcgacggctt
      481 ggttggcggc aaggttttca atgcggatgc cccattttcc cgggcggtag agtccgggtt
      541 cgatggaggt aaccatgcct tttttcatgg cggtttcggg cgtggcgggg gcggcgaagg
      601 cgatgcgctg cgggccttcg tggacgttga ggaaatagcc tacgccgtgg ccggtgccgt
      661 gtccgtagtc gcattgcgcc tgccacaggg gtttgcgaca aatcgcgtcg atcagcggcg
      721 aggggatgtt ttctgggaac acggcttcgg caagcgcgat atgggctttg agaacgaggg
      781 tgttgtcgcg tttttgttcg gcggtgggtg tgccgacagg gacgacgcgg gtgatgtcgg
      841 tcgtgccgcc tttgtattgc gcgccggagt cgatgagcag cagcccgttg ccgctgatgg
      901 tgctgtggct ttcgggcgtt gcgctgtaat gcggcagggc gccgttggcg ttgaagcctg
      961 cgatggtgtc gaaactcaat gacacaaaac ccgggcgcac gctgcggtgg cggtaaagca
     1021 tggtgtccac gtcgatttcg gtcaggctgc cgccgttgcc gatgatgtct tcaaactcgg
     1081 cgaagaaacc gcacaacgcc gcgccgtcgt gttccatcgc ttcgcggatg cgggcgatgt
     1141 cggcttcgga tttgcaggat ttgaacagcg tggacgggtt gattccctcg ataaggcgca
     1201 cgctttcggg caggcgcaca agcgtgctga cggcggtttt gttcggttcg ataagcaacg
     1261 cgccgccgat ttgcgcgagt ttgccggcaa cttgggcgta aggctcgacc gtgatgcctg
     1321 cggtttgcag cgcggcggcg gcttcggcat tcagacggca tcggtcggta aacaggacgg
     1381 cgttgtcttt gccaatcagc aggaaggaca cgaaaacggg attgaaaggc acgtcgctgc
     1441 cgcgcaggtt ggtcagccag gcgatgtcgt caagcgagga aaccaagtgg taatccgcgc
     1501 ctttttccgc catgacggcg cgcacgcggg cgagtttttc ggcggcggtt tcggagacgt
     1561 aggcggggtc gtggatgaac acggtttcgg caggaatggc cgggcggctt gtccacactt
     1621 ggtcaagcag atcgtttggg tgttcgatgc ggatgttttt ggcggtcagg gattgcgcca
     1681 aagtgcgttt gccggtgagc gagaccatat cggaagggat gccgacggcg gcgttttcgg
     1741 gcaggtttgc cgcgagccat tcgttgtacg gcggcacttg accgcttttt tgcagttcga
     1801 tgccgctgcc cgcaagctgc ttggcggctt gttcccaata gcggctgtcc acccatacgc
     1861 ccgcttcatc ggtggtcagg acaaacgtgc cgaccgagcc ggtaaagccc gataattcgc
     1921 ggcgcgcctg ccaatgctcg ggcaggtatt cggacaggtg ggggtcggcg gaagggatga
     1981 cgagcgcgtc caagccttgc gccttcatgg cttcgcgcaa tgcggacagg taattcgata
     2041 cggtattcat aacagttcct ccaatcgggt tttgcggctt cagacggcat ggacggaaat
     2101 ctgaaatgcc gtctgaaaaa cataaccatc ttatcaaatc gccagcctgc tgcaaaacgg
     2161 acgggctgat cggatggtgc gtgtttgcgc gaaaaaagcg atgtaaggtt gtttgttgta
     2221 aaattttagg cataaaatgt cgtttcatgc ctttttttgg aagtaatatg gaaaatatag
     2281 tcaagtttga gcatgaagtt ctaatagtgt gtgttggcag gtatttggat tacgttacaa
     2341 tacgcgcttt catcaaaatt tccctaccga gcggtatcct gtttttgaag acggtaggat
     2401 ttgggtttgt ttgggggcaa tcccgcccaa attggagcaa tagatagggc tgtgtccgaa
     2461 tatgcggctc tgtgtgttga aacacggtta aaaatacgga agactttatg tccgaacaac
     2521 atatttcgac ttggaaaagt aaaatcaacg cattgggacc ggggattatg atggcttcgg
     2581 cggcggtcgg cggttcgcac ctgattgcct cgacgcaggc gggcgcgctt tacggctggc
     2641 agatcgcgct catcatcatc ctgaccaacc tcttcaaata cccgtttttc cgcttcagcg
     2701 cgcattacac gctggacacg ggcaagagcc tgattgaagg ttatgccgag aaaagccgcg
     2761 tttatttgtg ggtattcctg attttgtgca tcctctccgc cacgattaac gcgggcgcgg
     2821 tcgccattgt aaccgccgcc atcgtcaaaa tggcgattcc ctcgctgatg tttgatgccg
     2881 gcacggttgc cgccttgatt atggcatcct gcctgattat tttggtgagc ggacgttacc
     2941 gcgctttgga tcgcgtttcc aaaatcatca tcgttacttt gagtatcgcc acgcttgccg
     3001 ccgccggcat cgctatgtcg cgcggtatgc agatgcagcc cgattttatc gagccgacac
     3061 cgtggacgct tgccggtttg ggcttcctga tcgcgctgat gggctggatg cccgcgccga
     3121 ttgaaatttc cgccatcaat tctttgtggg taaccgaaaa acaacgcatc aatccttccg
     3181 aataccgcga cgggattttt gatttcaacg tcggttatat cgccagtgcg gttttggctt
     3241 tggttttcct tgcactgggt gcgtttgtgc aatacggcaa cggcgaagca gtgcagatgg
     3301 cgggcggcaa atatatcggg caattgatca atatgtacgc cgttaccatc ggcggctggt
     3361 cgcgcccgct ggtggcgttt atcgcgtttg cctgtatgta cggcacgacg attaccgtcg
     3421 tggacggcta tgcccgtgcc attgccgaac ccgtgcgcct gctgcgcgga aaagacaaaa
     3481 cgggcaacgc cgaattcttt gcctggaata tttgggtggc gggcagcggt ttggcggtga
     3541 ttttttggtt tgacggcgta atggcgaatc tgctcaaatt tgcgatgatt gctgcttttg
     3601 tgtccgcccc tgtgtttgcc tggctgaatt accgtttggt caaaggtgat gaaaaacaca
     3661 aactcacatc aggtatgaat gcccttgcat tggcaggctt gatttatctg accggtttta
     3721 ccgttttgtt cttattgaat ttggcgggaa tgttcaaatg ataacgatgc cgtctgaaac
     3781 cgcaaaccgc tttcagacgg cattgccgcg tttatggaaa aaaatgccga catcgcgtaa
     3841 aatacgcgca aattttgtga ttcggtcagg tcgtctgaaa cagattgcgc ctgatttatt
     3901 ttttcggaaa accctatgag cgaacaaaac catccgcaaa ccgagccgca gttggacgaa
     3961 aaccaaatca tcgccctgcg ccgcgaaaaa ctgcacaaca tccgccaaca gcgcaacgcc
     4021 tatcccaacg acttcaaacg cgacagcttc gccgccgatt tgcacgccca atacggcgaa
     4081 atcggcaaag aagaactcga tccgcaaggc attcccgtca aagtggccgg ccgcatgatg
     4141 ctgaagcgtc aaatgggcaa ggcgagtttt gccaccattc aagacgtgtc cgggcaaatc
     4201 cagctttatc tgaacaacaa aggcgtgagc caagaaattt tggacgactt caaccattgg
     4261 gacttgggcg acatcgtcgg tgcggaaggc actttgttca aaaccaacca cggcgaactg
     4321 accgtacgcg tgtccgacat ccgcctgctg tctaaatccc tgcgcccgct gcccgacaaa
     4381 cacaaaggct tgagcgatca ggaaaccaaa taccgccaac gctacgtcga tttgattgcc
     4441 aacgaagaat cgcgcaatac cttcatcaaa cgcagccaaa tcatccaatc tgtgcgcaat
     4501 tttatggtga acgagcgtta tctcgaagtc gaaaccccga tgatgcaccc gattcccggc
     4561 ggcgcgacgg cgaaaccgtt cgtgacccac cacaatgctt tggacatccc gctctacctg
     4621 cgcatcgcgc ccgagctgta tctgaaacgc ttggtggtcg gcggtttgga gcgcgtgttt
     4681 gaaatcaatc gcagcttccg caacgaaggc atgtcggtgc gccacaatcc cgaatttacg
     4741 atgattgaat tttacgaagc cttctccgac tacgaacgta tgatgcagat ggcggaagac
     4801 atcatccgaa acgcatcgcg cacggtaaac ggcacggcga aaatcagcta caacggcaaa
     4861 gaagtcgatt tggaaagccc gtttgagcgt ctgaccatcc tcgaagccat caaaaaatac
     4921 aatccgcact acaccgacga gcagttgaac gatgcggaat ggctgaaaaa agaaatcgtc
     4981 aaacacggcg aaagcctgcc gccgtccccg ggcatcggca gcctgcaact cgcgctgttt
     5041 gaaggttgcg ccgagggcaa gctgtggaat ccgaccttca tcgtcgatta cccggtcgaa
     5101 gtttccccat tggcgcgcgc ttcggatacc aaacaaggtc tgaccgaacg tttcgaattg
     5161 ttcgttgtcg gccgcgaact ggcaaacggc tattccgagt tgaacgaccc cgaagaccaa
     5221 gccgaacgct tcaaagcgca agtggcgcaa aaagacgcgg gcgacgacga agcgatgcac
     5281 tacgatgccg actacatccg cgcgatggaa ttcggtttgc cgccgaccgg cggttgcggc
     5341 atcggcatcg accgcttagt gatgctgctg accgattcgc aaaccatccg cgatgtgatt
     5401 ctgtttccgc agatgcgccc cgagtaatca taaaaacagt tgaaatagaa atgccgtctg
     5461 aacccgattg gattcagacg gcattttgta tggcggtacg gatttattcg gtttccaact
     5521 gaccgaccca ttcggacaag gccgacaggc gttgttcgga tttcgccacg aacgggtttt
     5581 cggtatccca cgcgtagcct gccaaaatcg aagaaagcat acggctgatt ttcgggctgc
     5641 ggtcgggcgc gtacacgacg ttttggaagc ggaaatcgta ccaaccgtcc acatatcagg
     5701 ggcggtaatc cgaatcaaca cgccttctcg cctgtgcggc ggacataaac cgttttttga
     5761 cctccagcac cacaccgaaa atcacgctgc cttcgggcag gtcaaaggct tcagacggcc
     5821 tgcccgtctg ataaatcagc atcctgcccg caatatcgat aacaaggtgc gcgacgacca
     5881 gccgcttgtc ggacagttca atcagcacga tgtcttcgtc cgcagggcgc atacgcggct
     5941 cgaccaccag caaatcccct ttttcgataa ccggcgacat ggacgtgtcg ggcatggcaa
     6001 cggcaaacgt atattgtgaa ggggcgacca ccgatgcaaa caagtcgaaa ctgcccgtga
     6061 gtttgcctgt acgggcgaaa gccgccgcct gacggtctga caacaaagga cggggtgtga
     6121 gcctcatcga cagtgctttg ccgtcggcaa cgctgcggtt gtgcgtatgc gtatgatggt
     6181 tgttgatggt cgtatcgcct tggacatcgt taaggactat gctgtttgaa cctgccacgg
     6241 atttggtcat ctcattgtag gcttgcgtcg tgatgcgctc ttgcttggtc atacctgtta
     6301 cagcctgttt cagcatttct aacgctatgt gattcttcct aagggtcgct ataccggctt
     6361 ttgcagcttg ctcattacca caagaggggc aaccccagct acttcctatg aacatattgg
     6421 agtacctcga acaggtttgg tttccatgtt tagggcagtt gattacacac ggcttggctg
     6481 taccctcaaa ctcgaccaac ttaatgccac gatgaccgaa acgttcctca acctcagcag
     6541 cagcttcttc aaatgttttt gaccttcttg ccatattgac ctccggatta ttgattattt
     6601 tggctatgct ttaacgaggg attggaatga ggtaaagctg ttgccctctc cccgcaatag
     6661 ttccattagg cgcggatgaa tgaatagttt gtccctgccg atggcgattt cttgcagcac
     6721 acctatgtct gagagctctt tcagatactt agaagccgtc tgccgtttgg ctatccctgc
     6781 cgcttctagg ttggcaatgc gtgtatatgg ctgttcaaac agaagattta ccagttcgtg
     6841 cgtgtagatt ccttgtgcgt gtgtccgtat gtgttgccgt gtctgctcaa acaggcggcg
     6901 tatcgcatct attttcgcta ccgtccaatc ggcggtatcg gctacgccgt ctaagatgta
     6961 gattatccag ctttcccagt cctgccgttc ggttacgcct aaaagcaggc ggtaatagtc
     7021 cgccctgttt tcgataatat agcggctcaa atacaaaata ggcaaatcca aaagcccttt
     7081 atcaatcaat agcaggctgt tcaatatgcg ccccgtccgc ccgttgc
//
LOCUS       DAXHRP010000107         7116 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.107, whole genome shotgun sequence.
ACCESSION   DAXHRP010000107 DAXHRP010000000
VERSION     DAXHRP010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7116
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.107"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..387)
                     /locus_tag="ACFM72_001540"
     CDS             complement(<1..387)
                     /locus_tag="ACFM72_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HFC6258089.1"
                     /translation="MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGIRRKVFTNI
                     KGLKIPHTYIETDAKKLPKSTDEQLSAHDMYEWIKKPENIGSIVIVDEAQDVWPARSA
                     GSKIPENVQWLNTHRHQGIDIFVLTQG"
     gene            complement(388..672)
                     /locus_tag="ACFM72_001541"
     CDS             complement(388..672)
                     /locus_tag="ACFM72_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC6258090.1"
                     /translation="MKLLAALIPLLMSVAGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     HSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            complement(1617..3176)
                     /locus_tag="ACFM72_001542"
     CDS             complement(1617..3176)
                     /locus_tag="ACFM72_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC6258091.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLERSQIKFQSSNNLKSS
                     GFKLDSSSKSFAKFIEAANFEHIPTGAKARINAKITASVSRAGVLAGVGKLVRLGAKF
                     STRAVPYVGTALLAHDVYETFKEDIQARGYQYDPETDKFVKGYEYSNCLWYEDERSIN
                     RTYGCYGVDSSIMRLMSDYSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNN
                     FVLNSCTFSWNGGDCVVNKGDDYRNGANFSLIRNPKYKEEMDAKKLEEILSLKVDANP
                     DKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVI
                     PRPDLTPGSAEAPNAQPLPEVSPAENPANNPAPNENPGTRPNPEPDPDLNPDANPDTD
                     GQPGTSPDSPAVPDRPNGRDGKDGGLLCKFFPDILACDRLPEPNPAEDLNLPSETVNV
                     EFKKSGIFQDSAQCPAPVTFTITVLDSSKQFAFSFENACTIAERLRYMLLALAWAVAA
                     FFCIRTVSREV"
     gene            complement(3118..3435)
                     /locus_tag="ACFM72_001543"
     CDS             complement(3118..3435)
                     /locus_tag="ACFM72_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC6258092.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMALIAQKEFEEFVNNVKE
                     YDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNS
                     MFE"
     gene            complement(3551..3853)
                     /locus_tag="ACFM72_001544"
     CDS             complement(3551..3853)
                     /locus_tag="ACFM72_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258093.1"
                     /translation="MGYRVGINCFDTRLQADDYLLSSLPPTVTQDGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIYGFRLLINFLKDMGKVGTD"
     gene            complement(3881..4111)
                     /locus_tag="ACFM72_001545"
     CDS             complement(3881..4111)
                     /locus_tag="ACFM72_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258094.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDASAIGTQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            complement(4349..4549)
                     /locus_tag="ACFM72_001546"
     CDS             complement(4349..4549)
                     /locus_tag="ACFM72_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258095.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEMGGGFQIFQFFVKSE"
     gene            complement(4553..4864)
                     /locus_tag="ACFM72_001547"
     CDS             complement(4553..4864)
                     /locus_tag="ACFM72_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258096.1"
                     /translation="MFNQTQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSKNFSRLENLKYPCEVMVMVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            complement(4876..6090)
                     /locus_tag="ACFM72_001548"
     CDS             complement(4876..6090)
                     /locus_tag="ACFM72_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC6258097.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTP
                     DQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKT
                     LNLTFEHKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLS
                     KVYHQNVDYDYF"
     gene            complement(7003..>7116)
                     /locus_tag="ACFM72_001549"
     CDS             complement(7003..>7116)
                     /locus_tag="ACFM72_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC6258098.1"
                     /translation="ARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT         1837 a         1777 c         1442 g         2060 t
ORIGIN      
        1 gccttgagtc aaaacaaata tatcaatgcc ctgatgtctg tgcgtattca gccattggac
       61 attttcaggg atttttgaac ctgccgagcg tgccggccat acgtcttgag cttcatctac
      121 aatgacaata gacccgatat tttcgggctt ctttatccat tcgtacatat catgcgccga
      181 aagctgctca tctgtcgatt tcggcagctt tttcgcgtcc gtttctatgt aggtgtgcgg
      241 tatcttcaag cctttgatgt tcgtaaatac tttacggcgt atgccgtttt catccggctt
      301 aaacatttca tcgtttgcca tcatggaaac catttttaat gttttccctg aaccgggcgt
      361 gccggttatc aaacagatct ctgccattta ttttttcttc ccgattgagg ttgctagttt
      421 tgtcatttgt ttgaatgaca gaataaaggc gatcgcgccg aaaagaatgt ttagaacagt
      481 accaccgccg cttatataga aaagctgtaa cattgcttga ggtgcgcccg ttatgctatg
      541 ggttatcgcc tgttgaaaat gggctaccaa tctatccacc cccgaatagg tcacggccat
      601 caatcccaat gcagtcaata tacggcctgc cacgctcatc aaaagcggaa tcaatgcggc
      661 caacaatttc atttgctatc cctttcttaa aaggcacggt tgcctcatta aaaaaatgtt
      721 tcttaatctg aaagattttg cgccgcattc gcggcgcggc ggcgctgtgg ggacaccccc
      781 ctcgcgctta tcgccaatcc ccccgcgctt ctcggctatt tgcgacattc gtcgcaaagt
      841 gcactgcttc gcctgccttt cggccaaagt ttccgaagct gaacgctttg cgggggacta
      901 gtcccccaca ccccctagtc tcacttgcga cgccgcgggg gcatggggac ggcgcaaaag
      961 gcgcgcgcct taccacctgc ccttgcggca gagtgtattt ctttgtccga gcggcaaggg
     1021 gtatccataa agaatcataa aggcgaaaaa accccgcctt tacgattctt tacggacatc
     1081 ctccccctgc ctgaacaaag gttactgaag cccggcggtg cttcgcctgc cttttaccat
     1141 ggcttccgcc cagaccggcg gtacttcgcc tgcctttcgg ccgtggcttc cgcctaagcc
     1201 tggcggtgct tcgccctgcc tttcggccgt ggcttccgcc caaccggcgg tgcttcgcct
     1261 gcctgtagcc tggcttccgc ctagctcggc ggtgctgcgc ctgcctgtag cctggcttcc
     1321 gctcagaccg gcagtgctgc gcctgccttt cggccgtggc ttccgaagct gaaaggcttt
     1381 gcggggacta gcccccgcac ccccagtctc acttgcgacg ccgcgggggc agggggaacg
     1441 gcgcaaaagg cgcgcgcctt accacctgcc cttgcagcag agtgtgttct tttggcgggg
     1501 cggcaagggg tatccaaaaa gatttataaa gacgataaag ccgtctttac aaatctttct
     1561 ggacgtcctc cccctgcctt ggcacaagtt actgaagccc ggcggtgctg cgcctgctag
     1621 acttcacggg atactgtgcg gatacaaaaa aaggcggcaa ccgcccaagc aagggcgaga
     1681 agcatgtacc ttagccgttc ggctatggta catgcgttct caaagctgaa cgcgaactgc
     1741 ttgcttgaat caagcacggt tatagtgaac gtaacggggg cgggacactg tgcggaatct
     1801 tgaaagattc cggatttctt aaactctaca ttgacggttt cagacggcag atttaaatct
     1861 tctgccggat tgggctcggg cagcctgtcg caagctagaa tgtcggggaa gaatttgcac
     1921 aaaagcccgc catctttgcc gtccctgccg tttgggcggt ccggaacggc cggggaatcg
     1981 gggcttgttc cgggctgtcc gtccgtatcg ggatttgcat cgggattcaa atcggggtcg
     2041 ggttcgggat tgggacgcgt gccggggttc tcattggggg ccgggttgtt tgcggggttt
     2101 tcggcgggcg atacttcggg cagcggctgt gcgttcggcg cttccgcgct tccgggggtt
     2161 aagtcgggac gcggaattac ttgaacatcc actgtggtgt tgccttgcga atccctgccg
     2221 aatgttgcga caacctgaac gggattcccg ttcctgtccg tgacgggtcc catattcact
     2281 tttgttccgg gtgcgacttc tactttttcg gaataaccgg gatatccggt tgcctttatg
     2341 tatttgtcgg gattggcatc gactttcaac gataaaatct cttccagctt tttggcatcc
     2401 atttcttctt tgtatttcgg attgcggata agggaaaaat tagccccatt tctgtaatca
     2461 tcacctttat tgaccacaca atctccgccg ttccaactaa atgtgcaact atttaaaaca
     2521 aaattattcc aatccaaaga acttaattta ttcagttctt ctttatgcca attccaaaac
     2581 ggacgtgcca gcctatacat ttggctttcc atcaattctt tgacttcggg gaatctgctg
     2641 taatcggaca taaggcgcat aatcgaactg tcaacgccgt agcagccata ggttctatta
     2701 atacttcttt cgtcttcgta ccaaaggcaa ttactatatt cgtagccttt tacaaatttg
     2761 tcggtttcgg ggtcgtattg gtagcctcgt gcctgtatgt cttctttgaa agtttcgtat
     2821 acgtcgtggg ctaaaagggc tgtccctaca taagggactg cccttgtgct gaatttcgcg
     2881 cctaagcgga cgagtttgcc gacccccgcc aatacgccgg cgcgggaaac gctggcggtt
     2941 attttggcgt tgattcgggc ttttgcgccc gtagggatgt gctcaaaatt tgccgcttct
     3001 atgaatttgg caaaactctt agaacttgaa tctaatttaa aaccacttga ttttaaatta
     3061 ttacttgatt gaaatttaat ttgtgatctt tctaatctta caggttcaga ataagaatta
     3121 ctcgaacata gaattaaaat cagaactatc ggtgtactct tgataaacga attcatgaac
     3181 agtttttccg ttctcttctg attttcttat aaaaataaca gattcatcag aaaaataaat
     3241 cttccaaata ttatgtgcga ctctcttatt taagaaataa gagaaactct ctaaaatatc
     3301 gtactctttt acgttattaa caaattcttc aaattctttc tgagcaatta atgccatcga
     3361 ttgcccaaaa tacttgctag acggctgata tttataaagt gccaactgcg cctgagtgat
     3421 aaacggcttg ttcatggttc tgcctttcaa tgattgtttt gaaagcctga ttttaaaaca
     3481 cgtcatttaa atatcaaagc gacagacaaa gccaagaaga aaccgagaag aaaccaaaaa
     3541 tcaataatca tcaatcagta ccaaccttgc ccatgtcttt taagaaatta atcagcagcc
     3601 tgaaaccgta aatgactacg aacagaatta aaaccgtcga acctacgtaa gaaccttgct
     3661 ttatctgctc aaaattggaa cattccggat aagacaacgt aaccggcttt ccgttcaaaa
     3721 tccatttatc gcccaccctt tccggcctga tgatttttcc gtcctgggta acagtaggag
     3781 gaagggacga caataaatag tcgtctgcct gcaatcttgt atcaaaacaa tttatgccga
     3841 cacgatagcc catttatacg cccctttttc ttcactctgt ttatttgaca gatttgatca
     3901 tgctccaagc catcttgaag ccttggattg ccaagatgac cgtaatggcc gccataccca
     3961 cggcggaaac cattgccaca aaacccatga ttacattcgc cacttgcgta ccaatcgcgg
     4021 atgcatcaaa gccatctgcc ataacaatag ccggtgtgaa gataccagct gccaacaatg
     4081 cttttacagc atatttttta acgatgttca tcgttttttt cctttttttg atatttaaaa
     4141 taagacgact tcttgacttg cttcatccgg acgaagtctt ttccgaatct cgtttttagc
     4201 cgataaaata gaggattgcg aaaagaaaaa gaaacataca gaccacccag ccgataatta
     4261 gtgttgcaag gttcattttc atgatatttt tcctttgttg cgggctttgt gaaaggttaa
     4321 cagaccgccc gccgagcctg tttttctttt attccgattt tacgaagaac tgaaatatct
     4381 ggaatcctcc gcccatttca tttatgcctg aattcaacgc atcttcgtaa ctttcaaatt
     4441 gacctgctga tttaatattt tgagtaaacc ccacatcacc gaacggatcg ggataaataa
     4501 agtcatgcgt ttctaaatct tgaactatga aacgttcttc aaatttcata aatcaacctt
     4561 tcggcttttc cgccacctga aaatcaatta atgacggaac catgccttta cctgtcgaag
     4621 tcatttcaac cattaccata acttcgcacg gatatttgag attctctaac cttgagaaat
     4681 tcttactatc cccgaacttc atttgtgctg ccgtaaatcc aacagcatta cccgactgtg
     4741 ccggtaaagg tgttgcaacc aatacggaac aagtgtcaat gttagagcca tcaatttcac
     4801 ctttgaattt tttggctccc aaaaaagttg caggataagt tacagtttga gtttgattaa
     4861 acattttgat ttcctttaaa aataatcata atctacattt tgatgataaa ctttacttaa
     4921 atattcctga tatttccttt ctttctcgac atcataatca ggactaaaaa gccttttttc
     4981 cctatcgaat ttgtcagaat ttttaaaagc aataaccccc aattcatcaa gttcaatttc
     5041 caaatcaata tccggctgtt catgaataaa accgtgtttc aaaccgtccc ttaacatttc
     5101 cagagcatat ttttcaggtt ctaatccttt gggaaatccc gaatctgcct ttaaagattc
     5161 cacaatttcg ctattatcaa aacccatttc aatcatgaaa ttgaccagtt ttccaaccgc
     5221 gtttttcgcg taatgcaatt tatgctcgaa agttaaatta agcgttttct ttctctgatc
     5281 aaacctttcg ggaaccggca tatttttaaa ttttctacaa attggaaaag ctccacagaa
     5341 atacgaaccc tgatttatta aaatatccaa gggtatttct atatctccat aattaaactg
     5401 gatctcgaac cttacccatt tgctttcttt atctccaagc tgcctgcctt tctcataaac
     5461 acgaacaaaa cgagaatttt tcttgcgacc tacataaaat gtcttgccgc tcccgtcctc
     5521 attccgccaa gccgtaccga tcgtttcaga tttcggcctt tgattgctgt tatcaaaaaa
     5581 accattatcg tgatctaaca acgcctgatc cggcgtgtac tctccatcaa aaaaatcaag
     5641 tgctaggtca attcgcgtta ttcttgtcct tatcgaatca tcgagaaact gctttagcct
     5701 caactcccaa cccggacttg caacgctgca accagtacct ttcaactcaa ctaaaacagt
     5761 attgcgctga cctccgaaat gcacctctcc ataatcaaca tcatccgaac ctaacctata
     5821 catggattca tagaatttgt tgccccttga tttgcatttg cgcgttatgc caaaacctag
     5881 aatttcttcc agctttctgc ttaatacata catgtattca gcatcagaaa ataaagggca
     5941 accggaaact ttcagtaaag tatcttcatg gaatgtgaat gaaatccaat caacaaaaac
     6001 cccgtcttgc ttacctcttc gctgcggaat ttctaaaagc ttcccttttc cgtccgatat
     6061 aaagtgtgag aaatattcaa cttcactcat tcgttcacta ctcttggaat tggtttttaa
     6121 tttcgctccc cccctgttag tcaagggggg ggctttcagc cgtttcccgt cttccgcgct
     6181 aaagcgcgta cgacggtcaa cgaccgaaag ccaaatcctg acaaactttt aaagatcaac
     6241 aaaaaagacc acaaccatcc gttgtgataa tcactggaaa attcgaacca accgaatcta
     6301 tataatcgaa cgcctgataa agctttgaaa aattctcttg attaatgagt ttatgcggtt
     6361 cgccatgtct gaactgataa aaacacaaaa cacaagaatc tgatttttta aatattctcc
     6421 aataagaaca ggaaaatatt acatttactg ctgacataaa aaagcccctt tcacttggct
     6481 gtcaaagggg aatgttaaga aaattaatgc gcccctttga tagagcgcat catataaggc
     6541 gggaatctag aacgtaaaat ctaaagaaac cgttttaccc gataagtttc cgtgccgaca
     6601 aacctagatt cccgcctgcg cgggaatgac gggattttag gtttctgatt tcggttttct
     6661 gttttaaggg aatgacgaga cttgagatgg cggcatttat cgggagcaac tgaaaccacc
     6721 ctgccgtcat tcccgcgaaa gcgggaatct aggttcgtcc ggtttcggtt atttccgata
     6781 gattcctgcc gcgttggggg tctggattcc cgcctgcgcg ggaatgacgg gactttaggt
     6841 ttctgttttt gtttgagacc tttgcaaaat tcctttccct cccgacagcc gaaacccaaa
     6901 cacaggtttt cggctgtttt cgccccaaat accgcctaat tttacccaaa caccccctta
     6961 atcctgcccg gatacccgat aatcaggcat ccgggctgcc ttttaggcgg cagcgggcgc
     7021 acttagcctg ttggcggctt tcaacaggtt caaacacatc gccttcaggt ggctttgcgc
     7081 actcacttta atcagtccga aataggctgc ccgcgc
//
LOCUS       DAXHRP010000108         7103 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.108, whole genome shotgun sequence.
ACCESSION   DAXHRP010000108 DAXHRP010000000
VERSION     DAXHRP010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7103
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.108"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(71..430)
                     /gene="rnpB"
                     /locus_tag="ACFM72_001550"
     ncRNA           complement(71..430)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACFM72_001550"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(509..1612)
                     /gene="prfB"
                     /locus_tag="ACFM72_001551"
     CDS             complement(509..1612)
                     /gene="prfB"
                     /locus_tag="ACFM72_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HFC6258099.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1715..2608)
                     /locus_tag="ACFM72_001552"
     CDS             complement(1715..2608)
                     /locus_tag="ACFM72_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HFC6258100.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHIGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAIATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2950..3399
                     /locus_tag="ACFM72_001553"
     CDS             2950..3399
                     /locus_tag="ACFM72_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC6258101.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3473..3781
                     /locus_tag="ACFM72_001554"
     CDS             3473..3781
                     /locus_tag="ACFM72_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258102.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAADKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3898..4740
                     /locus_tag="ACFM72_001555"
     CDS             3898..4740
                     /locus_tag="ACFM72_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HFC6258103.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEC
                     RRAA"
     gene            4730..5476
                     /locus_tag="ACFM72_001556"
     CDS             4730..5476
                     /locus_tag="ACFM72_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HFC6258104.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNHSKYTPSPAAFIRQYRYDVTDDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5498..6085
                     /locus_tag="ACFM72_001557"
     CDS             5498..6085
                     /locus_tag="ACFM72_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HFC6258105.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTALDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6091..6270
                     /locus_tag="ACFM72_001558"
     CDS             6091..6270
                     /locus_tag="ACFM72_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HFC6258106.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6511..6951
                     /locus_tag="ACFM72_001559"
     CDS             6511..6951
                     /locus_tag="ACFM72_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HFC6258107.1"
                     /translation="MIKETLMRPIFLSFVLFPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1803 a         1894 c         1625 g         1781 t
ORIGIN      
        1 aaacacaacc taaataaaaa tgccgtctga accatatttc aggtttcaga cgacatttgc
       61 gtgtcggatg cacaccggac aggcggtaag ccgggttctg tctcggacag tcattcctct
      121 aggcataccg ttaccggtat gctcaagcaa cctacccgaa cgctcggcgg gcagcgtcat
      181 tgcgttctgt ttggtcttgc tccgaatggg gtttggcctg ccgcatattg ttaccaaatg
      241 cgcggtgcgc ccttaccgca ccttttcacc cttgcctgtg ctgccaaagc agccatcggc
      301 ggttttgctt tctgttccac tttccgtcgc gttaccgcgc ccggccgtta accggcattc
      361 taccctgcgg agcccggact ttcctccccg tatgccttac gcgatacgcg gcgactgtct
      421 gcccgtcccg tgtgcggcgc ggattataac acgaaacgca aaaatgccgt ctgaaacggt
      481 acaggtttca gacggcatac agcctaaact acacgccctg tttcaggctg gcttcgataa
      541 agccgtccaa atcgccatcc aatacggctt tggtgttgcc gacttcgtag cctgtacgca
      601 agtctttgat acgtgaggaa tccaaaacat acgaacggat ttggctgccc caacctacat
      661 cggatttacc ttcttccaac gcctgtttct cttcattgcg tttgcgcatt tccaattcat
      721 acagtttgga cttcaacatt tccatcgcgg cggctttgtt ggcgtgttgc gaacggtcgt
      781 tttgacattg caccacaatc cccgtcggct cgtgggtaat gcgcacggcg gagtcggttt
      841 tattgatgtg ctgaccgccc gcgcccgatg cgcgataggt gtcgatacgc aaatcggcgg
      901 ggttgatttc gatttcaatg gaatcatcga tttcagggta aacgaacacg gaggcaaacg
      961 aagtatggcg tttgttgttc gagtcaaacg gtgaatagcg caccaagcgg tgaacgccgg
     1021 tttcggtacg cagcaaacca taggcgtatt cgccttccac tcggatagtc gcgcggttga
     1081 tgcccgcgat ttcgccgtcg tcttcctcaa ggatttcgat tttgaagcct ttgcgctcgg
     1141 cgtagcggct gtacatacgg aacagcatcc ccgcccagtc ttccgcttcc gtaccgcccg
     1201 cgcctgcggt gatgtcgata aagcagttgt tcggatcggc aggctggttg aacatccgtt
     1261 tgaactccaa atccgccatc tgtttttcca gccccgccac atcttcctgc acggcggcga
     1321 aaccttcttc gtcgttttct tcgacggtca tttcaatcag catacggttg tcttcgatgc
     1381 ccgaagcgat gttgtcgagc gtcaacacga tgccttcgag gattttgcgc tctttgccga
     1441 tttcttgggc gcgtttcggg tcgttccaaa gttcggggtc ttcggaaaga ccgacaactt
     1501 cttccaatcg gtctttctta ccctgataat ccatataaac gcggatgtct tcgctgcgct
     1561 tctccaagtc gttcagggtg ttgttgagct ggttgattac ttcggcttcc atgattcttt
     1621 tgttctttca aaattttagg ggcgtattgt acgggattcg ggtatttttt tctatggata
     1681 aagccttctg gaaacacgtt cggacggcat agcgtcaata acggtatgcc gccagtttgc
     1741 gtttgatttc aggcaatgcg gcacgtgcag cctcctcgcc caaccggatg gcgcgttttt
     1801 tctgatcgaa tcctccgact gcacccaaat ccaaaacctg cggtttgata accacatccg
     1861 cctgccccaa ctcgttttgc agtgcggaaa cgctcattac gttcagcgtc tgatcgagat
     1921 aagagaagaa gccttggctg atgtttttgc ccggacgggc ggaaatatcg acggcaatca
     1981 cgaaattcgc cccctgccgc cgggcggcac tgacgggcac gggctgcgac agaccgccgt
     2041 caacatatgt atgcctgccg atgataacgg gttggaacac attgggaatg gcggcggaag
     2101 cgcgcacagc ctgcccggca ttcccctgat tgaaagcgac ggccttgccg gtttcaaaat
     2161 cagtagcaat agcggcaaat ttgatgggaa actgctgaat ccgcctgccg ccgacttttc
     2221 ggttgatgta attttgcagc ttttcgcctt tgataaaacc actggtggac aaggttaaat
     2281 cgactaaatc cgttttacct aaaatctcgg cttccaattc aaggcggtcg ggcgacatac
     2341 ccgatgcaaa aaggctgccg actatcgaac ctgccgatgt gccggttact acttttacag
     2401 gaataccgtt ttctttcaaa accttaataa tgcctatatg ggcaaatcct ttagacgcgc
     2461 cgccaccgag tgccaaaccg accactgcgg cgggtttggc ggtttgcacc ggcttgcggg
     2521 cggcattgtt tcccgccgtg ccgcaggcgg caagcaacgc ggcggcggcg attgccaaaa
     2581 gcggtctgat ttttgaaaac gttaccatat tttccattcc tttatatatc gcaccccgtc
     2641 aaaaagaggg attgcttttc ttaacaaccc cctttgacag ccaagcaaat gggggctttg
     2701 ttaagtcatc atcaaaatta atatttcttt ttttccttta cggaaattat atttgaaggc
     2761 atactatcca aggcgggaat tatctcacaa caccgccgtt atccaaatat cccgcctttt
     2821 tcctttcctt tccatcaaaa tactttcttt ttatattcat taacttgtta aatcattggc
     2881 tgccgggtgt cagtttttcc gacaaaatcc gtctaatggg gtatcaacag aaccaaaaca
     2941 ggaacactta tgaaaatcgg aacaacttgg cagacggcat ccgctatgct ggttttgcgt
     3001 ctgtttgccg catatgaatt tttggaatcg ggtttgcaaa aatggaacgg ggagaattgg
     3061 ttttctgaaa tcaacgatca attcccattc ccgttcaact tgctgccgga cgcgttaaac
     3121 tggaatctcg ctatgtatgc ggagctttta ctgcccgtac tgttgctttt gggtttggca
     3181 acgcgtctgt cggcattagg gctgatggtc gttaccgccg tcgcttgggc tgcggttcac
     3241 gccggttcgg gttacaatgt ctgcgacaac ggttataaaa tggctttaat ttatatcgtg
     3301 gtattaatcc cgctgctttt ccagggtgcg ggcggatggt cgctggatac gctgctgaaa
     3361 aaacggtttt gcccccaatg ccgtctgaag caagattgat tcagtcgtgg aatctgactt
     3421 taaacattcc aaccttatct cgttaacttg atattctgaa aaggaaatag aaatgaacaa
     3481 aaacattgct gccgcactcg ccggtgcttt atccctgtct ttggccgccg gtgcagttgc
     3541 cgccgacaaa ccggcaagca acgcaacagg cgttcataaa tccgcccatg gctcttgcgg
     3601 cgcgtccaaa tctgccgaag gttcgtgcgg cgcggctggt tctaaagcag gcgaaggcaa
     3661 atgcggcgag ggcaaatgcg gtgcgaccgt aaaaaaaacc cacaaacaca ccaaagcatc
     3721 taaagccaag gccaaatctg ccgaaggcaa atgcggcgaa ggcaaatgcg gttctaaata
     3781 atcccacccc ttcaaaccaa gccgcgtttt tcagtaaaat gcggcttttt ttaacggcaa
     3841 acaaagattt tttaacaagc acatcattct tttgtgccat ccgaaccggg taaaaatatg
     3901 attcaacacg caggcttggg ctaccgccgc gacttggcgg aagactttct ctcgctttcc
     3961 gaaaacagcc cgatatgctt tatcgaagcc gcaccggaaa actggctgaa aatgggcggc
     4021 tgggcgcgca aacagtttga ccgtgtggcg gaacggctgc cgctggcgtt gcacggatta
     4081 tctatgtcgc tgggcgggca agcaccgctg gatactgatt tgatagacgg catcaaagaa
     4141 atgatgcgcc gttacgattg cacgtttttc tccgaccatt tgagctactg ccacgacggc
     4201 ggtcatcttt acgatttgtt gccgctgccc tttaccgagg aaatggtgca tcatacggcg
     4261 cggcgtatcc gcgaagtgca agaccgtttg ggctgccgca tcgccgtgga aaacacgtcc
     4321 tactatctgc attccccgct tgccgagatg aacgaggtcg agttcctcaa cgcggttgca
     4381 cgtgaggccg attgcggcat tcatctggac gtgaacaata tctacgtcaa cgccgtcaat
     4441 cacggcctgt tgtcgccgga ggcttttttg aaaaacgttg acgcagatcg cgtgtgctat
     4501 atccatattg ccggacatga cgtggaaacg ccggaattgt tgattgatac acatggcgcg
     4561 gcagttttgc cgactgtttg ggacttgctc gaacttgcct atgccaaact gccgacgatt
     4621 ccgcccaccc tgttggaacg cgattttaat ttcccgcctt ttgccgaact cgaagccgaa
     4681 gtcgccaaaa tcgccgatta tcaaacgcgt gccggaaagg aatgccgccg tgcagcctga
     4741 aacctccgcc caataccagc accgtttcgc ccaagccata cgcgggggcg aagccgcaga
     4801 cggtctgccg caagaccgac tgaacgtcta tatccgcctg atacgcaaca atatccacag
     4861 ctttatcgac cgctgctata ccgaaacgcg gcaatacttt gacagcgaag aatggagccg
     4921 tctgaaagaa ggtttcgtcc gcgacgcgca cgcccaaacg ccctattttc aagaaatccc
     4981 cggcgagttc ctacaatatt gccaaagcct gccgctttca gacggcattt tggcactgat
     5041 ggattttgaa tatacccaat tactggcaga agttgcacaa attccggata ttcccgacat
     5101 tcattattca aatcacagca aatacacgcc ctcccctgcg gcctttatcc ggcaatatcg
     5161 atatgatgtt accgatgatt tgcaggaagc ggaaacagcc ttgttaatat ggcgaaacgc
     5221 cgaagatgat gtgatgtacc aaacattgga cggcttcgat atgatgctgc tggagataat
     5281 gggttcctcc gcgctttcgt ttgacaccct cgcccaaacc cttgtcgaat ttatgcctga
     5341 ggacgataat tggaaaaata ttttgcttgg gaaatggtca ggctggactg aacaaaggat
     5401 tatcatcccc tccttgtccg ccatatccga aaatatggaa ggcaattccc cgggccaaaa
     5461 ccatctatcc gcataaaatt accttgttcc cgatactatg ccgctacccg acctgaccga
     5521 tgccgaatta atagagtcgc gtaaactgct tctgcatttt gcgcggcttc agttgcccga
     5581 ccaccctgat ttggctgaag atttagtgca ggaaacattg ctgtccgcat acagcgcagg
     5641 cgacagtttt caaggcaggg cacttgtcaa cagctggctt tttgccatat tgaaaaacaa
     5701 aattattgac gcattacgtc aaatcggaag gcagaggaaa gtctttaccg cactggatga
     5761 cgagctactg gatgaagcat ttgaaagcca tttttcccaa aacgggcatt ggacgccgga
     5821 agggcagccg caacattgga acactccgga aaaatcatta aacaacaacg aattccaaaa
     5881 aattctgcaa agctgcctat acaacctgcc tgaaaacacc gcacgggtat ttaccctgaa
     5941 ggaaatactc ggtttttcat ccgacgaaat acaacaaatg tgcggtatca gcacgtccaa
     6001 ctaccacacc attatgcacc gcgcccgaga atcattgcgc caatgcctgc aaatcaaatg
     6061 gttcaaccaa gaaaacccga agtaaacgtt atgaaaaaat gccgcgatat cgccctgctt
     6121 ctttccaaac atcaggaccg ggaaaccacc ccgggcgaga agatttccat atacacacac
     6181 ctgctgttct gtccgtattg ccgtgaatat aaaagacaac ttcaaaccat caaaagatca
     6241 ctggcaaaaa caaccagaac ttcaaaataa atgccgtctg aaaaggcttc agacggcata
     6301 agctgacgga aacaaatcaa accgatttac tgttatcggc agttcatcca taatacacgc
     6361 ttcaaaagca gcatattcct ccatacggaa tatataaata cgcaaaacac gaaggctgca
     6421 tcaatttgct atatttgctt tatttgcctt atttcacaga cggcgctacc cctcccgccc
     6481 aacccgttct ttctgaatga gcagatttca atgattaagg aaaccctaat gcgcccaatc
     6541 ttcctatctt tcgttttatt ccctattttg ataaccgcct gcagcacacc ggacaagtct
     6601 gcccgatggg aaaatatcgg cacaatctca aacggcaata ttcatacata tatcaataaa
     6661 gacagcgtga gaaaaaacgg aaatctgatg attttccaag ataaaaaagt tgttaccaat
     6721 ctaaaacaag aacgttttgc caacaccccc gcatacaaga ctgccattgc cgagtgggaa
     6781 atccactgca acaacaaaac ataccgctta agttcgctac agttgtttga tacaaaaaac
     6841 acggaaattt ccacacaaaa ctacacagcc tcttccctcc gcccgatgag catcctgtcc
     6901 gggacattaa ccgaaaaaca atatgaaacc gtatgcggaa aaaaactctg attgcaactt
     6961 atacacaaac ttacccacaa accttatcat aaaaatgccg tctgaaatac tgaaatatca
     7021 gcatttcaga cggcattttg ccattccctg aaaattatcc acaaagttat ccacattatt
     7081 ttttaaaacc ggcttccatc cga
//
LOCUS       DAXHRP010000109         7091 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.109, whole genome shotgun sequence.
ACCESSION   DAXHRP010000109 DAXHRP010000000
VERSION     DAXHRP010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7091
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.109"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            144..773
                     /locus_tag="ACFM72_001560"
     CDS             144..773
                     /locus_tag="ACFM72_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HFC6258108.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGLKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            929..2590
                     /locus_tag="ACFM72_001561"
     CDS             929..2590
                     /locus_tag="ACFM72_001561"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HFC6258109.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADSYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPTVHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENI"
     gene            2707..3312
                     /locus_tag="ACFM72_001562"
     CDS             2707..3312
                     /locus_tag="ACFM72_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HFC6258110.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            3384..3776
                     /locus_tag="ACFM72_001563"
     CDS             3384..3776
                     /locus_tag="ACFM72_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HFC6258111.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3805..3954)
                     /locus_tag="ACFM72_001564"
     CDS             complement(3805..3954)
                     /locus_tag="ACFM72_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258112.1"
                     /translation="MPSEARIAGSDSIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(3975..4421)
                     /locus_tag="ACFM72_001565"
     CDS             complement(3975..4421)
                     /locus_tag="ACFM72_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HFC6258113.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(4553..4765)
                     /gene="rpsU"
                     /locus_tag="ACFM72_001566"
     CDS             complement(4553..4765)
                     /gene="rpsU"
                     /locus_tag="ACFM72_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HFC6258114.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(5054..6901)
                     /gene="ltgA"
                     /locus_tag="ACFM72_001567"
     CDS             complement(5054..6901)
                     /gene="ltgA"
                     /locus_tag="ACFM72_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HFC6258115.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPEGKTLADYSSYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAVATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAVKRALVLFQNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIPL
                     EGAVYAETIPFSETRDYVKKVMTNAAYYASLFGAPHIPLKQRMGIVPAR"
BASE COUNT         1415 a         1880 c         1929 g         1867 t
ORIGIN      
        1 taaagaatcg ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca
       61 ctatattttg acggggttga agttgacatc tacaaggttt aatgtttgaa tacatttaaa
      121 aatatatttg aatgagatgt tttatgattc aaaatgtcgt tacttcaata atcctgtatt
      181 ctgggacagc cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagta
      241 gaaaagacat cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc
      301 taagtttgct ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc
      361 tcggcttgat tccgattttc ctaggcctca aagttttgct gttaggagat tctgatggag
      421 aggctattgc taaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta
      481 tgattacttt tgcaagttgt ggtgctgaca atattggtgt ctttgtccca tattttacta
      541 ccttaaattt agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct
      601 tggttttttc tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat
      661 atagcagatg gtttgttgct gttgtttatt tgggattggg ggtatatatc ctgattgaaa
      721 acaacagttt tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat
      781 agtatctgca aagactgcca tgtgcagtct tttttgttgc cggtcttttt gtgtctgatg
      841 ctgtctgatt ttatctgatg ccgtctctgc acgacctttg tgcgaatatt tgctacactt
      901 ggcaatccgt ccatttcttc tcacacttat gctgacctat actccgcccg atgcccgccc
      961 gcccgccaaa acccacgaaa aaccgtggct gctgctgttg atggcgtttg cctggttgtg
     1021 gccgggtgta ttttcacatg atttgtggaa tcctgccgaa cctgccgtct ataccgccgt
     1081 cgaagcactg gcaggcagcc ccaccccctt ggttgcccat ctgttcggtc aaaccgattt
     1141 cggcataccg cccgtgtatc tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg
     1201 ggctgccgac tcatacgatg ccgcacgctt tgcaggcgtg tttttcgccg ttgtcggact
     1261 gacttcctgc ggctttgccg gtttcaactt tttgggcaga caccacgggc gcagcgttgt
     1321 tttaatcctt atcggctgta tcgggctgat tccgaccgta cactttctca atcccgctgc
     1381 cgccgccttt gccgccgccg gactggtgct gcacggttat tctttggctc gccggcgcgt
     1441 gattgccgcc tcttttctgc tcggtacggg ctggacgctg atgtcgttgg cagcagctta
     1501 tccggcagca tttgccctga tgctgccctt gcccgtactg atgtttttcc gtccgtggca
     1561 aagcaggcgt ttgatgttga cggcagtcgc ctcacttgcc tttgccctgc cgcttatgac
     1621 cgtttacccg ctgctcttgg caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacga
     1681 tcacgttttc ggtacgttcg gcggcgtgcg gcacgttcag acggcattca gtttgtttta
     1741 ctatctgaaa aacctgcttt ggtttgcact gcccgcgctg ccgctggcgg tttggacggt
     1801 ttgccgcacg cgcctgtttt cgaccgactg ggggattttg ggcattgtgt ggatgcttgc
     1861 cgttttggtg ctgcttgccg tcaatccgca gcgttttcag gataacctcg tctggctgct
     1921 tccgccgctt gccctgttcg gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc
     1981 gtttgtcaac tggttcggca ttatggcgtt cggactgttt gccgtgttcc tgtggacggg
     2041 ctttttcgcc atgaattacg gctggcccgc caagcttgcc gaacgcgccg cctacttcag
     2101 cccgtattac gttcccgaca tcgatcccat tccgatggcg gttgccgtac tgttcacacc
     2161 cttgtggctg tgggcgatta cccgcaaaaa catacgcggc aggcaggcgg ttaccaactg
     2221 ggcggcaggc gttaccctga cctgggcttt gctgatgacg ctgttcctgc cgtggctgga
     2281 cgcggcgaaa agccacgcgc cggtcgtccg gagtatggag gcatcgcttt ccccggaatt
     2341 aaaacgggag ctttcagacg gcatcgagtg tatcgacata ggcggcggcg acctgcacac
     2401 gcggattgtt tggacgcagt acggcacatt gccgcaccgc gtcggcgatg tacaatgccg
     2461 ctaccgtatc gtccgcttgc cccaaaatgc ggatgcgtcg caaggctggc agacggtttg
     2521 gcagggtgcg cgcccgcgca acaaagacag taagttcgca ctgatacgga aaatcgggga
     2581 aaatatataa aaaacaacag attgagccga atttctggat taagtgccgg aaatcgcgta
     2641 taattgcgcg attaaacctt tataaatcag ccgttttgca ggcatcacac aggagcgaca
     2701 attattatga tgaccctcta ttccggcatt acctgcccct tcagccaccg ctgccgcttc
     2761 gttttgtacg aaaaaggcat ggattttgaa atcaaagacg tcgatattta caacaagccc
     2821 gaagacctcg ccgtcatgaa cccgtataac caagttcccg tgctggtcga gcgcgatttg
     2881 gtactgcatg agtccaacat catcaacgaa tacatcgacg aacgcttccc ccatccgcag
     2941 cttatgcccg gcgatcccgt tatgcgcggc cggggccggc tggtgctgta ccgtatggaa
     3001 aaagaattgt tcaaccacgt ccaagtgtta gaaaaccccg ccgccaccaa caaggaacag
     3061 gcaaaagcgc gcgaagccat cggcaacggt ctgaccatgc ttgccccttc gttcagcaaa
     3121 agcaaataca tcctcggcga agatttttct atgattgatg tcgcccttgc tccgctgctg
     3181 tggcggctcg accactacga tgtcaaactg ggcaaaagtg ccgcgccgct gctcaaatac
     3241 gccgagcgca tcttccagcg cgaagccttt atcgaagcac tgacacccgc cgaaaaagcc
     3301 atgcgcaaat aagcccggaa tgcttgcaaa acccgccgtt ttgtaggcat tttcacattc
     3361 aggcacacca cacggaaccc attatgccca cttccaccaa accctacatc ctccgcgcac
     3421 tttgcgaatg gtgcagcgat aacagcctca cgccgcacat tcttgtctgg gtcaacgaac
     3481 acacgcgcgt ccccatgcag tacgtccgcg acaacgaaat tatgctcaac atcggcgcga
     3541 ccgccacgca aaaccttcaa atcgacaacg attggatcag cttttccgcc cgcttcggcg
     3601 gacaggcgca cgatatatgg atacctgtcg gacacgtcct cagccttttc gcacgggaga
     3661 ccggcgaagg tatggggttt gaattggaag cgtatcgccc cgacacgccg cctgaaaaca
     3721 cctctgccga aaccgcgccc cggcccgcca aaaaaggctt gaaattggtc aaataaatct
     3781 atgccgtctg aacggaatcg tgtttcagac ggcattttgt ccgatggggc gcaaacggaa
     3841 tccgtttatc ggcaaaaccc gtttcggtgt atcgaaaccg tgttgcccct gccgattcga
     3901 tattgggaca ttgaaaatgc tgtctgaacc tgcgatacgg gcttcagacg gcatttttcc
     3961 ttatattcat acaatcaggc ggtcagtacg gctttcagaa ttttgttgac ttcgcccata
     4021 tcggctttgc cggcgaggcg ggttttcaat acgcccatca ctttgcccat atccgccata
     4081 cctgccgcgc cggtttcggc aacggcggca tcgaccgcag tacggatttc gccggcggag
     4141 agcatttgcg gcaggtagcg gtgcagtacc tcgatttcgg cgttttcttt gtctgccaaa
     4201 tcctgacggc cggcttcagt gtagattttc gcgctgtctt tgcgctgttt gaccattttg
     4261 gtcaggatgg cggtgatttt ggcatcgtcg gcttcggtgc gttcgtccac ttcaaactgt
     4321 ttgacggcgg cgttgatgag gcggatggtg ccgagggaaa cttggtcttt ggcgcgcatc
     4381 gcggttttca tgtcttcggt aaggcggatt ttcaggctca taatgtcctc gctgggatgt
     4441 cggatggaga cggcgggttt cgatgccgtc tgaaaagcaa aacacaccgc agagcaggtc
     4501 ttgcggtgtg tcctcatatc acagggctga cctgtaatct gtacttgaac gtttagtaca
     4561 ttttgggcgg cagttgttgg ctgcgcaggc gtttttgcag gcgttttacg gctgccgctt
     4621 ttttgcgttt gcgttcggta gtcggttttt cgtaggcttc gcgggcgcgc agctcggtca
     4681 gcaggccggt tttttctacg gcgcgtttga aacggcgcat agcgacttca aatggttcat
     4741 tctcttttac gcggattgca ggcattttat ttcctttaat aaattcggtt gtttcatctg
     4801 cccatcatat cggtggaaag ggtagggcgg acggtgttga aggtttaccg tatcgctgtg
     4861 ccttgcggcg gcgggatacg cgccgtgacg gaaacatcac ctcctaacgg gtcggcttgt
     4921 gccgtgtcaa gctgcttgaa aaagcaggaa aaacaatttt cggattgtct tatatttatg
     4981 gttcgccgtc aatgccgttc gggataaaaa tgccgtctga aagaccgggc gggtttcaga
     5041 cggcatcggt acgtcagcgt gcaggaacaa tgcccatacg ctgtttgagc gggatgtgcg
     5101 gcgcgccgaa gagggaggcg tagtaggcgg cattggtcat cacttttttg acatagtcgc
     5161 gcgtttcgga aaacgggatg gtttcggcat ataccgcacc ctcaaggggg atatccgcct
     5221 gccatcggcg cgcccttccg gggccggcgt tatagcctgc ggtagcgagg acttcgttgt
     5281 tttgcaggcg gcgtttggtg tctgccatat accacgtccc catacggata ttgccgtcgg
     5341 cggtgtaaag ttgtgcggca tccataccga ttttgccggc gatttcgcgc gcggtggcag
     5401 gcataacctg catcagccct tgcgcgccta cgcgggattg cgcgcctata acgaagcggc
     5461 tttcctgacg aatcagcccg taaacccaag ccggatcgac attaacattt tgcgcgtggc
     5521 ggattactgt gtctttaaac ggcgaaatat agcgcaaggt gtagttgagt ttgcggtcgg
     5581 tgcgttccgc gctgttgacc gccatatcgt aaaaaccgtg gtcgaacgcg gtttgcgcgg
     5641 cggtcagcag cttgtcttcg tcgaagccgc gtgtggcaaa acgccattcc gcctgagcct
     5701 gacggcgcat tttcgcatcg ccggcggttc ggctgttttg gaatagcacc agcgcgcgtt
     5761 tgactgcgcc gtcttccgcc atacggagga cgctgttttt gccggcatcg ggaacattgt
     5821 tgcgcgtatc gattttgcgc cccaactctt cccctgccag tacggcataa aaattcctgc
     5881 ccgtcgctac cgcctgtttg tagagttttt ccgcctcttg cgtgttgccc gttgcggcgc
     5941 ggctgcgtgc cagccagtag agccaggtcg ggcttttttg cagtttttcg ggcatatgcg
     6001 agattacgga agccagctcg tcccaacgtc gggcgcgcaa ggcggcgcgg gcgtaccact
     6061 cgatttggtc gtcggtcagt tggcggcggt cggcaacctt gccgtaatag tccaaggcgg
     6121 caggcacatt gaggttttgc gactgataat gccccaatac gccccacgcg aaactgcgtt
     6181 gttcgaggct taaaccgctt tccatttcgg acagcagggc ggcggcattc ggcgatttgc
     6241 gtgcttcttt gccgatgacg ttcaacaggg catattcgcg cgaaccttgt gtaccgccgt
     6301 caaacgggct gcccaatgcg gcggcaaggt tgcgtgcgtc tgtggtttgg cggccggcca
     6361 gcagtccgcg cacgcgcctc caggcgtcgt tgccgtccaa caagccggat gcggctgcct
     6421 gttccaacag tttggtgcag cccgaaggca gtttgcccgt atttttgacc agttcggcgg
     6481 cacgcgtata gtcgttgcgg ctcgaatcgg cgtagcattc gacttcttgg gcgcgccctt
     6541 caggtttgag tttggcatat tcctgtgcaa acagcgtcca ctgtctgcgt gcgcccaaag
     6601 acttcagcca ctcgttgcgg acattttccg ccatcgcgct gtcgccggcg ttttccaaat
     6661 aggcggcgac ggcggcatcg tttttctgtt tcactgcatc cagtgcggaa gggtagctgc
     6721 tgtaatctgc cagcgttttt ccttcgggtt cggcagggcg ggtgggaacg cttgccgaaa
     6781 gaccggcagt ttctatattg tctgccaggg tcttgctgct gggcgcgtgt gtcgaagaac
     6841 acgcggcaag caccagggcc gccagcagcg gcagggaatg cttcatagag ggtaggtaca
     6901 tcggatttcc ttaagaatcg gaaccctgaa cggtcagggt tggaaaagac aaaatgccgt
     6961 ctgaacaggc gtttgcccga attatatgcc gaaactgcac cgcctttgga atgtttccga
     7021 cataatttat agtggattaa caaaaaccag tacggcgttg cctcgcctta gctcaaagag
     7081 aacgattctc t
//
LOCUS       DAXHRP010000110         7088 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.110, whole genome shotgun sequence.
ACCESSION   DAXHRP010000110 DAXHRP010000000
VERSION     DAXHRP010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.110"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(274..2964)
                     /gene="glnE"
                     /locus_tag="ACFM72_001568"
     CDS             complement(274..2964)
                     /gene="glnE"
                     /locus_tag="ACFM72_001568"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HFC6258116.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYDYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNGIKSLVRPFVFRKYLDYGAYEAMRKLHRQISS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQRLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPGEQTQSNGEWQWVWQEKPDEEGRQCRLKEHGFDAEAVAAR
                     LDQIRHGHKYRRLSAHAQPRFDALMPLLVRAAAAQNNPTDTLMRLFDFLENISRRSAY
                     LAFLNEHPQTLAQLAEIMGQSSWAAAYLNKYPILLDELISAQLLDTAFDWDKLAAELS
                     DGIKACGGDTEAQMDTLRRFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWRDVFGEEAATA"
     gene            complement(3161..3496)
                     /locus_tag="ACFM72_001569"
     CDS             complement(3161..3496)
                     /locus_tag="ACFM72_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258117.1"
                     /translation="MPSEALSGLQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WDSAANLAKEAGEGVKRFNERSRKLQNEYQQESSEKLRRVVNSEGFFGNSAQEKAIAR
                     KVLKERGEG"
     gene            complement(3510..3983)
                     /locus_tag="ACFM72_001570"
     CDS             complement(3510..3983)
                     /locus_tag="ACFM72_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HFC6258118.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(4146..5153)
                     /locus_tag="ACFM72_001571"
     CDS             complement(4146..5153)
                     /locus_tag="ACFM72_001571"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HFC6258119.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTDNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGEDSADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            5385..5621
                     /gene="acpP"
                     /locus_tag="ACFM72_001572"
     CDS             5385..5621
                     /gene="acpP"
                     /locus_tag="ACFM72_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFC6258120.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            5777..7024
                     /gene="fabF"
                     /locus_tag="ACFM72_001573"
     CDS             5777..7024
                     /gene="fabF"
                     /locus_tag="ACFM72_001573"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HFC6258121.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLTGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPGIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSLRMIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1602 a         1888 c         1913 g         1685 t
ORIGIN      
        1 tgtctgaaaa gtagaatgcg ctattttaat ggaaacggcg gggttttaaa cggttcttat
       61 ttgtttgttt tgatttttgc ttgggtaaaa aatcccatca ttcccacaaa aacagaagcc
      121 tgaaatcccg tcattcccgc gaaagaggaa tccggttttt gggtttcagc cattcccgat
      181 aaatcgcttt agctctgccg caaccttaaa acggcacggt acgaaaatac cgtctgaaac
      241 ccagattgtc aggcttcaga cggcattttt tgttcaggcg gttgccgctt cttcgccgaa
      301 cacgtcccgc cacaatttcc tgacattgcc gtaatgtgcc aacagttcgc cggttacttc
      361 ggtttttgcc gcgtcgcgca gtttggtgtt gtgctgctgc cggcggtaga agcggtaggc
      421 ggtgcggctt tgttcggcga ggtttttgtc gataaggctg cagtcggcgg cgatgtttaa
      481 gagggcgatg ttgccgtagt tgtccaagag ttgcggatac tggcgggcat gggcaagtat
      541 cagatattgg acgataaatt cgacatcgac cacgccaccg cgcgcgtatt tgacgttgct
      601 gtcggcaggc ggatgggtgg ggaacatttt ttcgcgcatt tcgataattt cgcctgctaa
      661 ggcggtttgg tcgcgttcgg cagtcagcat ttcggtgcgg atgcggtcga aggccgtctg
      721 aatttcgggt gtgccgcaga tgaagcgggc gcgggtgagg gattggtgtt cccacgtcca
      781 ggcgttttcg cgctggtatt tttcaaaggc ggcgatgctg tgggcgagga aaccggcgtc
      841 gccattaggg cgcaggcgca ggtcggtttc gtagaggctg cctgcgccag tggcggcgga
      901 aagccagttg gtcaggcgac gggcgaggcg gctgtacacg tcgcctgcgt cggggtgggg
      961 atcgtcgtag agatagacga ggtcgaggtc ggaggcgtag ccgagttctt tgccgccgag
     1021 tttgccgtaa ccaacgacgg cgaattgcgg ggtgtcgcgg tgttttttgg gcatgtccgc
     1081 ccatgcgcac agcagggcgg cggcgaggat ggtgtcggcg agggcggaga gttggtcgga
     1141 gagggattct accgtccaca gtccggcgag gtcttggacg gcgaggcgga agacttgggc
     1201 gtgctggaag cggcgcaggg tgtccatttg cgcttcagta tcgccgccgc aggctttgat
     1261 gccgtctgaa agttcggcgg cgagtttgtc ccaatcaaac gccgtatcta ataattgcgc
     1321 gctgatgagt tcgtccaaca aaatcggata tttgttcaga tacgccgccg cccaagaact
     1381 ttgacccata atctctgcca gttgcgccag ggtttgcgga tgttcgttga ggaaggcgag
     1441 ataggcggag cggcggctga tgttttcgag gaagtcaaac agccgcatca gcgtatcggt
     1501 cggattgttt tgcgctgccg ccgcccgtac caacaacggc ataagcgcat cgaaacgcgg
     1561 ctgggcgtgg gcggagaggc ggcggtattt atggccgtgg cggatttggt cgagccttgc
     1621 tgcgacggct tcggcatcga acccgtgttc tttcagacgg cattgccgcc cttcttcgtc
     1681 gggtttttcc tgccaaaccc actgccattc gccgttgctt tgcgtttgtt ctccgggttc
     1741 gctcaaaatt tcgttaaaca accgattgac ttggttccga tgttgattta aagcattcaa
     1801 aaaatcggcg taatcatcaa atcccatact ttcggcgagc cgttgccgct gttcgggcga
     1861 agccggcagg gtttgggttt gccggtcgtc ccaatattgc aaacgatgtt cgacatcgcg
     1921 caaaaagcgg taggcggcga gcagggtttc gacgttttca gacggcataa tgcccgattc
     1981 ggcaagtttc tccagcgttt cctgcgtgcc tttcagttgc agcgcacgca tttgcccgcc
     2041 gcgtatcatc tgaaaaatct gggcgataaa ttcgacttcg cggatgccgc ccgcgccgag
     2101 tttgatattg tccgccatcc cttttttgcc gacttcgctg ctgatttggc ggtgcagctt
     2161 acgcatcgcc tcatacgcgc cgtaatccag atatttgcgg aacacgaagg ggcgcaccag
     2221 cgatttgatt ccgttcggat acggcgtaac cacgcggcct ttgcaccacg cgtagcgttc
     2281 ccattcgcgc ccctgcgtaa tcaaatattg ctccagcgcg gtttcgctca ataccaacgc
     2341 gcccgaatcg ccatccggcc gcaaccgcat atcgacgcgg aacacctgcc cgtcggcggt
     2401 aatgtcgttc aacaacgcaa tcagtttctg cccgactttg gtgaaaaatt cctgattgcc
     2461 ccgttcgcgc ctgccgtcgg tgtcgcccga ttcgggatag acgaaaatca aatcgatgtc
     2521 ggaagacaca ttcaactcat aaccgcccgc cttacccatc gccaccacgc tcaaatgctg
     2581 cggcgatttg gtataacgcc cgatcggcgt gccgtacatg tcccgataat agtcgtaggc
     2641 aaagtccagc gcggtattga cggcaaaatc ggcaaacagc gtaatcgtgc gggtcacttc
     2701 gttcaaatcg ctgatgcggt ttatatcgcg cacgataatc tgcgacacca cataacggcg
     2761 caacccgcgc aactgccgcg ccaattcttc ctcgttttct tccgcacgga ttttgtccca
     2821 gtcggcaaag gcttggaaat ccgcttcggt caaaaccttg tccagcatag gcaggaaaat
     2881 ttcgggcttg agtttgccgt tgtcgagctg gcgggcgagg aagagggaat ggcggcgggc
     2941 ggtgtcgagg cggttgtcgg acatttcgga ttccgtttga aaaaatggca ggaagatgat
     3001 ggcggattca cttcaaatca ggacagggcg aggggatgcc gtaccggttt aaagtcaagc
     3061 cactatatca tagcaacctt cgatgccgtc tgaaaccttg ccccgatatt cggacggata
     3121 cctaccgata aaaaaacagc ggcaaatgcg ctgccctcgt ttagccttcg ccacgttctt
     3181 tcagaacttt gcgggcaatg gctttttctt gtgccgaatt accgaaaaaa ccttcgctgt
     3241 ttacgacgcg gcgtaatttt tcactggatt cctgctgata ttcgttctgc aatttacggc
     3301 ttctctcgtt aaatcgcttt acgccttctc ctgcttcttt tgccaaattt gccgcgctat
     3361 cccaaaaacc cataatcatg tcctccaatc gtttcaaata aataaggtcg ttgtttctgt
     3421 caagaaacaa cgacagttta taaactgtcg gaaaacaaaa tgccgtctga aggccggata
     3481 atgcttcaga cggcatcgga ttgccggttt taaccctgcc ctccgccgtt gttcaaatag
     3541 tgttcccagt gagaatataa ccgggcaata ttttcttcat aggtgtgggc agaaggaata
     3601 taaccgtctt tgggcggcat atacctgaca aatgattcta tttcttccgg ataatcaaaa
     3661 tctgcataaa ttttttcaac ttcccccaaa ggatcctcaa attcttcttt tctatggaat
     3721 acatcgctta agaggacgta cagccaattt ttaggggaat aatccctcat ttccgaagcc
     3781 aaatcttcca gaacaggctt taattcaaga atattggatt tgttgattaa agatagtttg
     3841 aacacacgtt catcatgatc tgaaagcgtc atttttcggg cataagctgc cacatcagcc
     3901 caacccaagt atttattccc atacccccac agaatatcct tccaagaaag acggactttt
     3961 tgcgcggtta aatcaaggtt cattttttac tccgattgcc tgctccgtgt tcacgcatcg
     4021 gtttgcctta tttcaaacag ggcggcgcgt aagggatttt caaggggcgt caggcggaaa
     4081 aaggaaatga aaatgccgtc tgaacggcaa aacgtgcgtt cagacggcat tttgggcgga
     4141 tcgcgtcatc gcgccaaagc cttcaaacat tctttgacca atgccggacc tttgtatatc
     4201 aatccgctgt acacttggac ggcggtcgcg cccaagcgga ttttatctgc cgagtcctcg
     4261 ccttccataa tgccgcctac gccgataatc ggcagcttgc cgtctatgtg gtctgccaac
     4321 agcttcaaca cccgattact tttttcatga acgggcagcc cgctcaaacc gccctgctcg
     4381 cctgcgagcg gatggctgcc gagacttgat ttgtcgatgg tggtattggt agcgatgatg
     4441 ccgtccattt cgacggattt gacaacgtgg gcgatgtctt cgatttgtgc ttcatccaaa
     4501 tcgggggcga ttttgacggc gagcgggacg tatttcccgt gtacagaggc aagctgtgcc
     4561 tgtttgtttt tcaaagcctc aagcaatgcg ctcaactcgt cgccaccttg cagcgcgcgg
     4621 aggtttttgg tgttgggcga ggaaatattg acggtaatgt aacttgcgtg tgcgtaggct
     4681 ttttcaaggc agattaaata atcatcggca gcgttttcga tgggtgtaac cgcgttttta
     4741 ccgatgttga tgcccaatac gccactgaat ttactttttt cgatgttgcg tatcatggtg
     4801 tcgataccgt ggttgttgaa acccatgcgg ttgatgatgc cttggtgttc gggaacgcga
     4861 aagaggcgcg gctgcgggtt gccgggctgc gggttgggcg ttaccgtgcc gatttcgatg
     4921 aaaccaaagc cgagcgcgcc caatgcgtcg atgtattcgc cgtttttgtc gagtccggcg
     4981 gcaagtccga cagggttggg caaatccata cccatcaatt ttacaggttt ggtacggttg
     5041 tcggttacag gaatcaaacc caatttataa accgtgtaga gcgcgtcgag cgtgaagtgg
     5101 tgggcttttt cggcatcgag tgcaaacagg atgcgacggg caagtggata catgacaggg
     5161 ctttctgctt cagatggaaa tgccgccatt ttaaccgaaa tcccgccaaa catacggcac
     5221 acaggtcaaa cttgaacgac aaaacccgcc gcacccaaaa atgtacaaat cggcaaatat
     5281 tgatataata gtcattagat agaaaactct attaaaagtc ggtacaatac caccgattta
     5341 tttcccttaa acaacctgcc gcaaggcata aaggaacgac tgatatgtca aacatcgaac
     5401 aacaagttaa aaaaattgtt gctgaacaac tgggcgtaaa cgaagccgac gtgaaaaacg
     5461 aatcttcctt ccaagacgac ttgggcgcgg attctttgga caccgtggag ctggttatgg
     5521 ctttggaaga agcattcggc tgcgaaatcc ccgacgaaga tgccgaaaaa atcaccaccg
     5581 tccaactggc tatcgactac atcaatgccc acaacggcta accggtcgtc gcccgacaca
     5641 acagcctctg ctgcaccgcg caatagaggc ttttccctta tatggcaaac tgtttgaacc
     5701 cctgccgcaa attacagacg gcatctgcac gacagccgca tatgccccca ttccgacaac
     5761 caacagcgag gttatcatga gtcagagaag agtagtcatt acaggcttag gtcaggtttc
     5821 ccctgtcggc aacactgtcg cagaggcttg ggacaccctg ctcaccggca aaagcggcat
     5881 cggcgcgatt acccgctttg acgcatccga catcaacagc cgtgtcgccg gcgaggtgcg
     5941 cggtttcgac atcggacaat acatcagcgc gaaagaagcg cgccggatgg acgtattcat
     6001 ccactacggc attgccgccg cattgcaggc aatcgccgat tcgggtttgg acgatgtgga
     6061 aaacctcgac aaagaccgca tcggcgtgaa catcggttcc ggcatcggcg gactgcccgg
     6121 catcgaggtc accggcaaag ccgtaatcga aggcggcgcg cgcaaaatca accctttctt
     6181 tatccccggt tctctgatta atctgatttc cggacacgtt accatcctca aaggctaccg
     6241 cggcccgagc tacgggatgg tttccgcctg caccaccggc gcgcacgcca tcggcgattc
     6301 cctccgtatg attaaatacg gcgacgcgga cataatggtt gccggcggcg cggaaggcgc
     6361 aatcagcact ttgggcgtgg gcggttttgc cgcgatgaaa gccctctcca cccgcaacga
     6421 cgaccccgcc accgcttccc gtccgtggga caaaggccgc gacggcttcg ttatcggcga
     6481 aggcgcgggc atattggtgt tggaagaatt ggaacacgcc aaaaaacgcg gcgcgaaaat
     6541 ctacgccgaa atcgtcggct tcggcatgag ttccgatgct taccatatca ccgcgccgaa
     6601 cgaagaaggc cccgcccttg ccgttacccg cgcgctgaaa gatgccggca tcaatcccga
     6661 agacgtggat tacgtcaacg cgcacggcac gtccaccccc ttgggcgatg ccaacgaaac
     6721 caaagccctc aaacgcgcgt tcggcgaaca cgcctacaaa accgtcgtca gctcgaccaa
     6781 atccatgacc ggccacctgc tcggcgcggc gggcggcgtg gaggccgtgt acagcatttt
     6841 ggcgatacac gacggcaaaa tcccgccgac catcaacatt tttgaacaag acgttgaagc
     6901 cggctgcgat ttggactact gcgccaacga agcgcgcgac gcggaaatcg acgttgccat
     6961 ttccaactcc ttcggcttcg gcggcaccaa cggcacgctg gtcttcaaac gcttcaaagg
     7021 ctgattccgc aaagccgccg ccgacatcga aatgccgtct gaaaccgttt cagacggcat
     7081 ttttatag
//
LOCUS       DAXHRP010000111         7088 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.111, whole genome shotgun sequence.
ACCESSION   DAXHRP010000111 DAXHRP010000000
VERSION     DAXHRP010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.111"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(106..498)
                     /gene="rpsI"
                     /locus_tag="ACFM72_001574"
     CDS             complement(106..498)
                     /gene="rpsI"
                     /locus_tag="ACFM72_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HFC6258122.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(508..939)
                     /gene="rplM"
                     /locus_tag="ACFM72_001575"
     CDS             complement(508..939)
                     /gene="rplM"
                     /locus_tag="ACFM72_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HFC6258123.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1117..1296)
                     /gene="ssrS"
                     /locus_tag="ACFM72_001576"
     ncRNA           complement(1117..1296)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACFM72_001576"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1302..1607)
                     /locus_tag="ACFM72_001577"
     CDS             complement(1302..1607)
                     /locus_tag="ACFM72_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HFC6258124.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1618..1947)
                     /locus_tag="ACFM72_001578"
     CDS             complement(1618..1947)
                     /locus_tag="ACFM72_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258125.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(2002..2991)
                     /locus_tag="ACFM72_001579"
     CDS             complement(2002..2991)
                     /locus_tag="ACFM72_001579"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HFC6258126.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3114..5816)
                     /gene="ppc"
                     /locus_tag="ACFM72_001580"
     CDS             complement(3114..5816)
                     /gene="ppc"
                     /locus_tag="ACFM72_001580"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HFC6258127.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQDLSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEGNPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPDKAKIIFGMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5859..6752
                     /locus_tag="ACFM72_001581"
     CDS             5859..6752
                     /locus_tag="ACFM72_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC6258128.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPVCGAER"
BASE COUNT         1404 a         1817 c         2053 g         1814 t
ORIGIN      
        1 tgtttttgat ttttgcccaa tctgtaatct ttagattgcc aatgggaaac cgtctactac
       61 aaataaaaaa ccctgcgata agcagggttt tttgaatttc caacattaac gtttggagaa
      121 ttgttttgca cggcgtgctt tgcgcagacc cggtttttta cgttcgactt cgcgggcatc
      181 gcgagtaacg aaaccggctt gagacaaggc gggtttcaac gcggcatcga agtcgatcag
      241 ggcacgggta atgccgtggc ggattgcgcc ggactggccg gtttcgccgc cgccaacaac
      301 attgactttg atgtcgaaag attcggcgtt ttcagtcaga accaagggtt ggcgaacaac
      361 cattcggctg gtttcgcgtg cgaagaattc gtcaacgggg cggccgttta cgatgatttg
      421 acctgtacct ttagtcagga atacacgagc cactgaactt ttgcggcggc ctgtgccgta
      481 gtagtattta ccgttcatgt cgcgtcctta tttcaattcc aaaactttgg gttgttgtgc
      541 ggcatgggca tgttctgcac cagcgtacac tttcagtttt ttaatcatgg cgtaacccaa
      601 gggacctttg ggcaacatgc cttttacggc ttgttccaaa gcgcggccgg ggaattgctc
      661 ttgcatttcg cggaaggtgc gttcgtagat gccgcccggg aaaccggaat ggcggaagta
      721 ttttttgtct tcgaatttgg caccggttac acgcagtttg tccgcgttga taacaatgat
      781 gtaatcgccg gtatcgacgt ggggggtgta ttcaggtttg tgtttgccac gcaggcggct
      841 ggcgacttcg gctgcaacgc gacccaagac tttgtcttgg gcatcgatga cgaaccattc
      901 gcgcttcacc tcgtggggtt tcgctgaaaa ggttttcata gtggaaatcc agatagatat
      961 agaaagttgt aaattttaaa gacaggattc gattttgtca atcgcattac cgcgttacgg
     1021 aaggattttc cggatttcgg cagactgcat actgcttttt cgggcggggc ggcggccaat
     1081 gtgaaaaacc gcatcgttgc gatgcggttt tgaatgggaa tccccgcgag agccgtttcg
     1141 gccgaatccg cttgaacctt gctgacaagg cggctgcctc gggtagtttc gggtgcgtcc
     1201 gcaaaaggac gctcgcgccc actactgctc ccggcaacct taagcgaact tattggttca
     1261 aaggaatata tgccttcgcg gacaccgcag ggaaaaaggg gttattcctg cgccaagcgg
     1321 gatagtgctt tttggcaggc gttgtccata tcggctattt tacgcgcaaa atcgccgatt
     1381 gccaaatcgc cgccgttcag ggaggttttc aacaggtcgt ggacgacgtt gagcgcggcc
     1441 ataatgacga ttttttcgct gtccgcgacg cgtccgcctt cgcggatggc ttcggctttg
     1501 ccgttgagca ttccgactgc ctgcaacagt gtgtcttttt cttctgccgg cgtgttgacg
     1561 gtcagccggg cgtgcatgac ttcgatgtgg acttgttcga tgttcatcct ttaatcctta
     1621 ttgctgcgtt tcctgccatt gggggaggcg cgctgccagt gcgctgattt tttccctgct
     1681 ctgttcgagc aggctgcggt atcgtgtatt ttcttctgtc aggctgtcaa ttttgttttg
     1741 caggtcttct ttgagtttgc cgacttggac gagcagggct tcgctgagtt cgtcgacggc
     1801 ggtttcgtgt tcgagttttt gccgctcgtg cgcccgtttg agttcggcga cggtttcttt
     1861 gaggcggcgg ttttcgctga cgagggtttc gaatttttgt accaacgtat aaacgctgct
     1921 ttcgagtttt tcgatatttt gtttcataac cttacctgtc cgtatgccgt ctgaaggctt
     1981 cagacggcat ctgtctgttg tttattcaaa acgcgcgctg cgttccatca gtctttcgac
     2041 aacctgttgc ggggtcattt ctttgcggat gagttgcagc agggtttggg taatcggcat
     2101 atcgatttgg tacttacagg cagtattgaa gacttcttct atcgtgctga ccccttcgga
     2161 aacgtgtccg atttcgacca gcacctgatg cagttccttg ccttctgcca aacccaagcc
     2221 gacgcggcgg ttgcgtgaga gtgcgccagt gcaggtcaag atgaggtcgc cgatgcctgc
     2281 cagccccatc atggttttgg gctgtgcgcc cattgcggag gcaaggcggg tgatttcagc
     2341 taatccgcgc gtaaccagtg cggcacgggc gttaagcccg tactctaggc catcggacaa
     2401 tccggtggca atcgccataa cattttttac cgcgccgcca accgccacgc cgataacatc
     2461 ggtactgccg taaagcctca tgacagtcgt gttgagctgc ggtacgagtt cttcaatcca
     2521 ctcttggttt tcggaggcga ggacgacggc gcagggcagt tgtttggcga gttcctgtgc
     2581 aaaactcggg ccggagagta cgccgatttt tttattgtcg ggcaatactt ctttcaatac
     2641 ttgaaaggtc agcagccctg tatcctgctc gaatcctttg caggcggcga ggacggggag
     2701 gtgtcccgcg ccgtactgtt tgagcagctc tgcgctgctt ctcaatccgg caacggaggt
     2761 tacgataagg acaagtccgc tgtctttgag cgcgtctgcc aaatccgcac acacttccaa
     2821 ggtttcggga aaggaaaagc cgggcagtcc gcgtttgttt tcacgcgctt cctgcatttg
     2881 gcggacttgg tctgcgttgc gcgtccacag ggatacgcgg ttgccgtgtt gggaaaagtg
     2941 cagggcgagc gccgtacccc acgaacctgc gccgataacg gtaattttca ttggtcgtct
     3001 ttcaacatat cactgccgtt cactttaaaa caatcggtgt ttctctgcaa gtgcggtcag
     3061 gaaaatgccg tctgaaaggc gttcagacgg cattttgccc cgatgcggca ctatcagcct
     3121 gtattgcgca aaccttgcgc cacaccgttg atggtcaggt gcaccatcag cagggcgtgc
     3181 ggattatcgg gttctttacg caggcgtttg agcatggcga cctgcaggcc gttgagggcg
     3241 ttcaggtaag gaatcctcaa agcgagcgaa cgggcgaggc tgcggttgtc gcgcaaaagc
     3301 tcttcggttt gcagcaggtc gagcagtgct ttgcggctgc gtcggtattc ttccttaatc
     3361 atcccgaaga tgatttttgc cttatcgggc gattcgctca agccggcata gttttccgcg
     3421 agggtgatgt cggttttcgc catcacttgt tccatattag agagcatggc ttggaagaac
     3481 gggttgcttt gggcgtgttc gcgcagggcg gcgagggttt cgggattgcc ttcgcacaag
     3541 gtttccaccg cgctgccgaa accgtaccaa gccggcagca tgaggcggtt ttgcatccag
     3601 gaaaataccc acggaatcgc gcgcaagtct tgaatccgtg ctaaggtctt gcggctggca
     3661 ggacggctgc cgaggttgag ggtagcgatt tcctgaatcg ggctggtttg cagaaagtag
     3721 tcgatgaagt cgggatgggt aatcagttcg cggtagtatt tgaacgatac gtccgacaaa
     3781 tcctgcatca gtttggcatc agggtctttt ttatccggca ggatgctggc ttccaaagtc
     3841 gcggcaacca aggtttccaa gttgcgctgt gcattgcccg ggtcggcgta tttggcggta
     3901 atgacttcgc cttgttcggt gatgcggatt tgtcccgcca cgctgccggc cggttgggcg
     3961 agaatggctt ggtaagaagg gccgccgccg cgtccgacgc tgccgccgcg accgtggaac
     4021 aggcgcatgc ggacatcgta ttttttgaag agttcgacca agcccaattc cgcctgatac
     4081 agacaccatg agctggtaac atagccgccg tctttgttgg agtcggagta gccgagcata
     4141 atttcttgga tgttgccgcg gctttcgagc agggcatcgt accaatcgag gcggaacatg
     4201 gtttccatga ccggacaggc gttttcgagt gcttcgatgg tttcaaacag cggcacgata
     4261 ttgatgcggc tgtgcggttt gccgttttcc accgccaaca ggccgctttc tttcagcagc
     4321 aatgccaagg cgagcaggtc gctgggttgt tcgcagttgg aaataatgct ttgtgttacg
     4381 gcatcttcgc caaattcgtc tttgattttg cgcgcttcgt tgaaaattgc cagttcgtgg
     4441 cgggtatggt cgctgtatgt gatgaacggg ctgtacagcg gacgttgatg gctcaattct
     4501 cgcaacagga cggcttgttt ttgttcttcg ttcaggctgt tgtagtcttc caagcctgcg
     4561 tgttggaaaa gctcggcaac cacatcggcg tgtttgcctg cgtgttggcg caggtcgagc
     4621 ggcatcatgt ggaagccgaa cacggacacg gaacggatga ggtctgccaa acggccttcg
     4681 gcaagcaggc ggctgccgtt gtcgataagg gaacgttgca attttttcaa atcatcgaga
     4741 aattcttgtg ccgaagcata cggctcgaga aagccgaatt tgcagcccat gcccaaaccg
     4801 agcgcgcgcg ctttgcccat agcgcgcgcc atgatgtaag caatggcgcg gcggtagggt
     4861 tcttccgtgc gggcaagttc ttcgtcaggc gagagggctg ccagtgccat tacgtcgtcg
     4921 ttgactttga cgcggcggat ggagagcggc agttcgcggt aaagtttgtc gagttcgcca
     4981 cggtaaaaac ggaacacggc atcggcgtgg cggcggaagg caaaacgcaa ggtttcggca
     5041 gaaacgaacg gattgccgtc gcggtcgcca ccgatccagc cgccgatttt gaggatattc
     5101 ggaacgcaga catcgggata gaccatctga aagtcgtgtt ccatattgcg gtagagcttg
     5161 ggcagggctt cgaaaaagct catcgggaag atggacacgc cgttgttgat ttcgtcgttg
     5221 acgctgagtt tgtggcggcg cgtttcgctg gtctgccaca agcccagcag gatagtgtcg
     5281 atttcgcggc gcagccgtgc cagcgcgtcg gcattggtgc agcgttcgcg ttgcggcaac
     5341 agtgcgcgga tgcggcggtt gaagcttaag acggtttggc gttgcacttc ggtcgggtgc
     5401 gcggtcaaaa cggcggtaac ggacgtattg tccaactgcc gctgcaccga tttgccgtcg
     5461 gctttccccg ctttgagcct gcggacggtt tccgtcaggc tgccttccgc gccgccgcgt
     5521 ccggcttctt cgtggatttg gcggcggcgt tcgtggtgca cgtcttcggc gatattcaaa
     5581 atctgggcga acaggccgca ggccaaggtt aaatcgtggg tttgttgttc gtccaattgc
     5641 ggcaatactt tttcaatcaa tgccgcgctg tcgtcggaag tggacaagag tttgaccgtt
     5701 tcgacaacca atggcgaggc ttcttcgtgc aggaggttga acagggattg tttcagaaat
     5761 tccgcgtccg ccgccaaagc cgcgtccttc ggattgttca gaatatgcag ttgcatgatt
     5821 tttctctcat tgccgtaaat actgtaaatg tacctcaaat gccgcatccg tgccaaaccg
     5881 ttcacacttt aaccgcccgt gtcccgaaat gccgtctgaa gttgaacgcc gcccgacggc
     5941 agcgttacaa tcgcccacaa ctgttttttc cgaacatcat catgaccacg accgaacacg
     6001 acaacgacga tgcattcctg ctgcggtaca gccgccacat cctcttggac gaaattggca
     6061 tcgaagggca gcagaaactt tccgccgcgc atattttggt cgtcggctgc ggcggtttgg
     6121 gtgccgccgc cctgccctat ctcgccgctt ccggcatcgg cacgctgacc atagccgatt
     6181 ccgacacggt cgagctgcac aacctgcaac gccaagtcgc atttgacgag ggcgatgtcg
     6241 gcaagcccaa agccgaagcc ttggcagacc gcctgaaacg catcaaccat aacgtcgatg
     6301 tccgcaccgt caacgaaaaa ctcgacggct gccgcctgac cggtttggtt caaaccgccg
     6361 acatcgtttt agactgctgc gacaactacg ccacgcgcca agccgtcaac cgtgtctgcg
     6421 tacaaacgaa aacaccgctg gtttcaggag cagcggtgcg ctttgaaggg caacttgccg
     6481 tgtaccgtcc cgacttgccc gactcgccgt gttacgcctg cctgtttgac ggcggatcgg
     6541 cttcagacgg catctgttcc ctcttcggcg tgttctcgcc gctggtcggc atcatcggca
     6601 gtacccaagc ggcggaggct ctgaaaatcc tgctggatgc gggcgaaccg tcgcacggca
     6661 ggctggcggt ttaccgtgcc ttggaagggg gctggcaata tttcgacctg ccgcgcaacc
     6721 ccgaatgccc ggtttgcggc gcggaacggt aaaaccctgc cgccgtttca gacggtatcc
     6781 aaacggatgc ggaggaacgg ttttaaaaat ttaaaaattt acatttcttt gcaaaaaaaa
     6841 aaaaaaaaaa ataaacttac cttataattg cagttgtttt agcaatgtct gtttcgcaga
     6901 ctcattgagt aagacgtttt ccccgtaatg tgtttggccg tctgtcccct ttgggttcgg
     6961 acggcttttt tttggctgtg tatgaatacc cggttggttt tatctgttta caggggaaaa
     7021 ccgcttattt ccgttcgggc ggaaaacggt tccatcggat aaaaggcatt ttgtccgact
     7081 gattaaag
//
LOCUS       DAXHRP010000112         7048 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.112, whole genome shotgun sequence.
ACCESSION   DAXHRP010000112 DAXHRP010000000
VERSION     DAXHRP010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7048
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.112"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            139..573
                     /locus_tag="ACFM72_001582"
     CDS             139..573
                     /locus_tag="ACFM72_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC6258129.1"
                     /translation="MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(622..1965)
                     /locus_tag="ACFM72_001583"
     CDS             complement(622..1965)
                     /locus_tag="ACFM72_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HFC6258130.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYAHLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGAWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(1970..2623)
                     /locus_tag="ACFM72_001584"
     CDS             complement(1970..2623)
                     /locus_tag="ACFM72_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HFC6258131.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQVRPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2774..3064
                     /gene="gatC"
                     /locus_tag="ACFM72_001585"
     CDS             2774..3064
                     /gene="gatC"
                     /locus_tag="ACFM72_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HFC6258132.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3127..4572
                     /gene="gatA"
                     /locus_tag="ACFM72_001586"
     CDS             3127..4572
                     /gene="gatA"
                     /locus_tag="ACFM72_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HFC6258133.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPSAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4569..5501
                     /locus_tag="ACFM72_001587"
     CDS             4569..5501
                     /locus_tag="ACFM72_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HFC6258134.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQDAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRQTA"
     gene            5544..6974
                     /gene="gatB"
                     /locus_tag="ACFM72_001588"
     CDS             5544..6974
                     /gene="gatB"
                     /locus_tag="ACFM72_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HFC6258135.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAHDYRYFPDPD
                     LLPVIISDDRLQKAKAEMPELPKEMAARFVADYGVSDYDARLLTASRVQAAYFEEAAK
                     ESGQGKLTANWMNGELAATLNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEASIAEIIEKHGLQQMTDTGEIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
BASE COUNT         1830 a         2114 c         1754 g         1350 t
ORIGIN      
        1 tgggaatctg ttttacccca atatataaag caccatatta aggcggagtg tcttccccac
       61 tttgacccga acccggaaaa gacaccgccc aagccaatcc tgatgctgcc ccgacagcca
      121 accattaagg aaatcctaat gaactttgct ttatccgtca ttatgttgac cctcgcctct
      181 ttcctgcccg tcccgcctgc cggagccgcc gtctttactt ggaaggacgg cggcggcaac
      241 agctattcgg atgtaccgaa acagcttcat cccgaccaaa gccaaatctt aaacctgcgg
      301 acgcgccaaa ccaaaccggc ggtcaaaccc gcccaagccg acgcagggaa gcgcacagac
      361 ggcgcggcac aggaaaacaa tcccgacact gccgagaaaa accggcagct tgaggaagaa
      421 aagaaaagaa ttgccgaaac cgaacggcag aacaaagaag aaaactgccg gatttcaaaa
      481 atgaacctga aggcggtggg aaattcaaat gcaaaaaaca aggatgattt gattcggaaa
      541 tacaataacg ccgtaaacaa atactgccgt taatcggctc tagcgcaaac cccatgccgt
      601 ctgaaacggc acggggtttg tttatttctg ccagtaggtt ttgacgttga cgaactcgta
      661 cagcccgaat tcggacaatt cgcgcccgta accggaatct ttgactccgc cgaaaggcag
      721 gcgcaaatcg ctgctggtat ggcggttgat aaacaccgat cccgcctgta ttttttcggc
      781 aaaccgccaa gcgcgttcgg tatcggcggt ataaatgcag gcacctagcc cgaacgggga
      841 atcattggca agggcgatgg catgttcttc gttttcggcg cgcaaaatca gggcggccgg
      901 cccgaatact tcttctctcc agacacggca ggcaggattt accctgtcta aaaccgtcgc
      961 gggataaaac cagcctcgcc cttgtgggat ttttccgccg gtcaggcata ccgcgccgtt
     1021 tgaaacggca tcttcaacct gcccgtgaac cctgtcccgc aaatcttcgc ggtgcagcgg
     1081 tgcaagcgta gtatcgggat gtttggggtc gcccattttc aatttggcgc attcggcaag
     1141 aaacagcgtg ataaaacgat cggctgcggc ttcggttacg atgatgcgtt tggcggcgtt
     1201 gcacgattgc cccgcatcgc ggaaacggga ataacaggct tctgcggcgg cgcgttccaa
     1261 atcggcatcg ggcatcacga taaaggcgtt gctgccgccg agttccaaga cggttttctt
     1321 gaggtttgcg cccgcatgtg ccgcaaggat gcgccccgta tgcgtcgagc cggtaaacgc
     1381 catcgcatcg gtatcttcaa ccgccttgag cgtgcccgcc tcatccaacc acgcgcctgc
     1441 cagaggaatg ccgtctgaag ccaaatcgaa cagtgcctga ctgacgcgtg ccacgctggg
     1501 cgcgggtttg acggcgcacg cgttgcccgc gcacatagcg ggaacggcga aacgcaatac
     1561 ctgccagacg ggatagttcc aaggcatgac ggcaaacacc acacccaaag gctcaaacct
     1621 tacctgactc aaactcgcct gcgtcgcgat ggttttgtgg gcaagcagtt cgggggcaag
     1681 gtgggcgtaa tagcgtatca gttcgataga cttgccgatt tccgcacggc attcgtgcag
     1741 gcagcgtccg acttcttcgc acaccatttc cgcaaaacgc tctttctccg cctccaaacg
     1801 gtcggcaaat ttttgcagac gcgcggcacg ttcggttacg cccagttgcg cgaacgcccc
     1861 gccgcgcatt ttcaaatccg ccagccgccg ttcaaactcc gcataatctt gagcggggcg
     1921 gcggtaaagc gtttcgcccg taaatacatt gacactgtga aacatcgaat caacctgcca
     1981 gttgcgggaa tatcgttttc agtcccgaca caataatctc caccgatacc gccgccagca
     2041 tcatacccat gatacggttt aaaatcgtca gccccgtcgc acccagcagg cggctgacct
     2101 tcccggcaac gattaaaatg gcataacaaa tcgcactgac caccaaaccg gccgcgataa
     2161 tcaacgcgat gtcgccgtat gttttagccg ccgaagcgta aataatcacg gtcgaaatac
     2221 cgcccgggcc gatggtgatc ggtatggcga tgggcacgac ggcaatcgct ccggcattgc
     2281 gggcggggcg cacctgcccc gtttccggct gcgcgccgag attctgcttg gcgggattgt
     2341 cgttgccgtt catcatcgaa atggcaatca gcaacaccaa aattccgccg ccgacctgaa
     2401 acgaaccgac gctgatgccc aaaaccttca gcagcgtacc gccgatcagc gcaaataccg
     2461 caatcacggc aaacacggca acggcggccg tccgcgcgac cttcctgcgc tccttcgtgc
     2521 tgtgcccgtt ggtcaggtca aggtaaagcg acaacgcgct aaacggatta atcagcacca
     2581 aaaaagccac aatcagcttg ccgatttcca tgcccaatcc cattatttcc ccctccttca
     2641 aacccgtgcg gcaggcatcc gatgctgcaa attgccgccg caacggattt ttccgttata
     2701 attaaaaatt caagcaatac gccccatcat acccgaacga cggtatcttt accatcagac
     2761 aaggatgctt ttcatggcac tgacacttgc cgacgtagac aaaatcgccc gactctcccg
     2821 actgcacctg actgcggaag aaaaagaaaa atcgcttcaa gaattaaacg acattttcac
     2881 tatggtcgaa cagatgcaaa ccattaacac agacggcatc gaaccgatgg cgcacccgca
     2941 cgaggccgcc ctgcgcctgc gcgaagacga agtaaccgaa accgaccgcg ccgccgaata
     3001 tcaggcgggt gctccggaag tacgcaaccg tctgtacatc gtaccgcaag ttatcgaaga
     3061 ataatccgaa tatgcttcag acggcatcag caataccgcc cgaagccctt taaggatgga
     3121 agatttatga cccaatacac attgaaacag gcaagcgtcc tgttgcagtc caaacagatt
     3181 tccgccgtcg aactggcaag cgcatacctt gccgccatcg ccgaaaaaaa tcccgccctc
     3241 aacggctata tcaccatcga ccaagataaa acccttgcag aagcccgtgc cgccgacgaa
     3301 cgtatcgcgc agggcaacgc ctccgcgctt accggcgtac ccgtcgccta caaggatatt
     3361 ttctgccaaa ccggctggcg cagcgcgtgc gcttccaaaa tgctcgacaa cttcatctcc
     3421 ccctacaccg ccaccgtcgt ccaaaacctg ctcgacgaag gtatggtaac gctcggccgc
     3481 accaatatgg acgagttcgc tatgggttcg accaatgaaa actcattcta cggcgcagcc
     3541 aaaaacccat ggaatcttga gcacgtcccc ggcggttcgt caggcggttc cgccgccgtc
     3601 gttgccgcgc gcctcgcccc tgccgcgctc ggttcggaca ccggcggctc tatccgccaa
     3661 cccgcatcgc actgcggcat taccggcatc aaacccacat acggcacggt ttcccgcttc
     3721 ggtatggtcg cctacgcctc cagcttcgac caggccggtc cgatggcgca aactgccgaa
     3781 gactgcgcga ttctgttaaa cgcgatggca ggtttcgacc ccaaagactc caccagcctc
     3841 gaacgcgaaa aagaagacta cacccgcgat ttgaaccaac cgctcaaagg tttgaaaatc
     3901 ggcctgccca aagaatattt cggcgaaggc aacagcgccg atgttctgac ggcattgcaa
     3961 aacaccattg atttgctgaa agcccaaggc gcggaattga ttgaagtttc cctgccgcaa
     4021 accaagctgt ccattcccgc ctactacgtc ctcgcctccg cagaagccag taccaacctt
     4081 tcacgttacg acggcgtacg ttacggacac cgcgccgccc aattcggcga tttggaagaa
     4141 atgtacggca aaacccgcgc cgaaggtttc ggcagcgaag tcaaacgccg catcatgatc
     4201 ggcacttatg tactgtcgca cggctactac gatgcctact atctcaaagc ccaaaaactg
     4261 cgccgcctcg ttgccgatga ttttcagacg gcatttgcac gatgcgacct catcctcgcg
     4321 ccgaccgcac cctccgccgc acccaaaatc ggagcggatg cttcgccggt tgaaacctac
     4381 ttgagcgaca tttacaccat cgccgtcaac ctcgccggac tgcccgcatt gaccctgccc
     4441 gcaggcttca gcggcggcgg actgcccgtc ggcgttcagc ttgtcggcaa ctacttcgcc
     4501 gaagccaaaa tcctcggtgc ggcgcatcaa atccaactca acagcgattg gcacggcaaa
     4561 cgacccgaat gaagcagaac cgcaccttta ccttccccga ttttcgcacc gtttacagct
     4621 atgcgccttt atatcggctg caacatttaa aatacacatt gcgaaaattt ttcggaaaaa
     4681 aagaaattta cgccttcgag cagtttgtca acgcctcccc tatccgtcag gggctgttcc
     4741 tccactgccc gcaggatgcc tatccgcttc tgcgcgaatt tgttgacagg cgttttaact
     4801 gcaaacgccg tttagatgcg atgacggcag attttcttat ggcggaaaaa ctgttcggca
     4861 cagacattct gcaccaaatg gaagactacc gcttccattt ggtcttggcg cacctttcag
     4921 acggcatcag cttgtggctc aaccgcaacg acaactgcgt cgaagaaggc gcgtggtctt
     4981 tatctttgcg cgacgaagca ggcaaccggc tgtatatggc gaccttcgcc tttgtcggca
     5041 cacacctgct gacagcctcc gtacaagggc cggcgggtga agaagccaaa gacaccgtcc
     5101 gccgcataac caaacaactt cacggcttgc gtccccaaca actgatggta accgccctgc
     5161 aatatttcgc cgccgtactc ggcttggacg gcgcaatggg cattgcacaa aaacatcagg
     5221 tcaaactgcg ctggaaactt aaaaagcgtg tcaaaatgaa ttacgacgca ttctggcagg
     5281 aatacggcgc aagtttggaa cgggacggct actggcatct cccccaaacc cccgcccgca
     5341 aagaccttac cgacatcgaa agcaaaaaac gctcgatgta ccgcaagcgt tatgaaatgc
     5401 tggacaacat ggttgcagag atgaaggacg gtctgaaaac agaagcacgc ggcatttcag
     5461 acggcatcca aacggaaaaa ccgctccgcc agacagcctg acgcgaagac tatcgaattg
     5521 atattttaga gaaagaagct cttatgacct gggaaaccgt aatcggcttg gaaatccacg
     5581 tccaattgaa caccaaatcc aaaatcttca gcggcgcatc gaccgcattc ggcgcagaac
     5641 ccaacgcgca cgccggcgtg gtggaatgtg ctttgccggg cgtactgccg gtaatgaacc
     5701 gagaagtcgt tgaaaaagcc atcaaattgg gtttggcttt ggatgcgaaa atcaaccgga
     5761 aaaacgtgtt cgaccgtaaa aactacttct atcccgactt accaaaaggc tatcaaatca
     5821 gccagttgga cttaccgatt gtcgaacacg gcaaattgga aatcgtagtc ggcgacgatg
     5881 tgaaaaccat caacgtaacc cgcgcccata tggaagaaga cgcgggcaag tccgtacatg
     5941 aaggcttgaa cggcgcgacc ggtatcgatt tgaaccgcgc cggcacgcct ttattggaag
     6001 tcgtatccga acccgaaatg cgctccgccg ccgaagccgt tgcctacgcc aaagccttgc
     6061 acagcttggt aacctggctg aacatttgcg acggcaatat ggcggaaggt tcgttccgcg
     6121 tcgatgccaa cgtatccgtt cgcccgaaag gtcaagcgga attcggcacg cgccgcgaga
     6181 ttaaaaacct caattccttc cgtttcttgg agcaggcgat taattacgaa gcagaagcgc
     6241 aaatcgagat tttggaagac ggcggcaaag tacagcaggc aacgatgctg tttgatcccg
     6301 aaaaaggcga aacccgcgta atgcgcctga aagaagacgc gcacgactac cgctacttcc
     6361 ctgaccccga tttgctgccc gtcatcattt cagacgaccg gttgcaaaaa gcaaaagcag
     6421 aaatgcccga gctgccaaaa gaaatggcgg cgcgtttcgt ggcggattat ggcgtgagcg
     6481 actacgacgc gcgcctgctc actgccagcc gcgtgcaggc tgcctatttt gaagaagccg
     6541 ctaaagagag cggacaaggc aagctgactg ccaactggat gaacggcgaa cttgccgcca
     6601 cgctgaacaa agaaggcatg gaacttgccg acagcccgat taccgcccca cgcctcgccg
     6661 ctctggtagg caaaatcgcc gacggcacat taagcagcaa attggcgaaa aaagcctttg
     6721 aagccatgtg ggctgaaccc gaagcctcca ttgccgaaat cattgaaaaa cacggtttgc
     6781 aacagatgac cgacaccggc gagattgaag ccatggtgga cgaagtgctg gcaaacaacg
     6841 ccaaagccgt ggaacagttt aaatccggca acgaaaaagc cctgaatgcg attgtgggac
     6901 aagtgatgaa ggccagcaaa ggcaaagcca accccgcgca ggttcaagag ctgattaaag
     6961 ccaaactggc ttaatccgtt atcacacagg tcgtctgaaa gcaaagttcc aacgaaggta
     7021 aaacaggaaa taagctttca gacggcct
//
LOCUS       DAXHRP010000113         6929 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.113, whole genome shotgun sequence.
ACCESSION   DAXHRP010000113 DAXHRP010000000
VERSION     DAXHRP010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.113"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(75..1421)
                     /gene="mnmE"
                     /locus_tag="ACFM72_001589"
     CDS             complement(75..1421)
                     /gene="mnmE"
                     /locus_tag="ACFM72_001589"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HFC6258136.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAQALCGKTPKP
                     RTATYADFTDTDGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1554..1709
                     /locus_tag="ACFM72_001590"
     CDS             1554..1709
                     /locus_tag="ACFM72_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258137.1"
                     /translation="MKKRNTYALLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1706..2137
                     /locus_tag="ACFM72_001591"
     CDS             1706..2137
                     /locus_tag="ACFM72_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HFC6258138.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARCFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISAILIL
                     LFAVFLVWSGYPATAASLAGGTVFALAGAFVIGRSRDQGKN"
     gene            2271..6644
                     /gene="app"
                     /locus_tag="ACFM72_001592"
     CDS             2271..6644
                     /gene="app"
                     /locus_tag="ACFM72_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HFC6258139.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGRNPDQHRFTYKIVKRNNYKAGTKGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFND
                     DNNGTGKINAKHEHNSLPNRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDIATTGNNNSLDSKKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLNDHWSQKEGIPRGEIVWDNDWINRTFKA
                     ENFQIKGGQAVVSRNVAKVKGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEK
                     TITDDKVIASLTKTDISGNVDLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNG
                     NLSLVGNAQATFNQATLNGNTSASGNASFNLSDHAVQNGSLTLSGNAKANVSHSALNG
                     NVSLADKAVFHFESSRFTGQISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSATDAPRRRSRRSRRSLLSVTPPTSVESRFNTLTVNGKLNGQGTFR
                     FMSELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFT
                     LQNEHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAEKDNAQSLDALI
                     AAGRDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDTALAKQREAETRPATT
                     AFPRARRARRDLPQLQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFA
                     EDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENT
                     FDDGIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGGKIRRRVLHYGIQ
                     ARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPA
                     QHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAA
                     AAKGPQLEAQHSAGIKLGYRW"
BASE COUNT         1858 a         1998 c         1677 g         1396 t
ORIGIN      
        1 aaacggatcg gattcccgtt tttatgggat aacggaatgt tcagccggac accaccacga
       61 tgctttcgat ccgtttattt tccgatacaa aacctcgaaa aaatcacgcc gagcaggtcg
      121 tccgccgtaa actcgcccgt gatttcgccg catgcgacct gcgccaagcg caagtgttcg
      181 gcaaacagct cgatttgatg gttgccgcac aatgccgcca gcgacaattc ttcctgcgct
      241 gctttgagtg cgttgacgtg ccgcgtccgc gccaaaaaca acccttcgct ttcgccctgc
      301 caaccggcct cgcgcaacaa cgtccgtttc agcgcgtcca agccgtcgcc ggttttcgcc
      361 gacaacgcga tgacggtttc cgcgcccgta ccgaacccgc ctgccgcgtg tgcgtgcaaa
      421 tcggatttgc tgtggatttc gatgcgtttc aactccggcg gcaacgcgtc caaaatcgcc
      481 cgtgtctttt cattcaaacc ctcgcgcgga tcgaccaaca ccagcgcgac atcggcttcg
      541 gatacggctt tgcggctgcg ttcgatgccg atacgctcga ccacgtcgtc cgtctcgcgc
      601 aaacctgccg tatcgacaat atgcaccggc acgccgtcaa tcaggatacg ttccctgacc
      661 gcgtcgcgcg tcgttccggc aatatcggta acaatcgcca cttcgtcgcc cgccaacgcg
      721 ttcagcaggc tggacttgcc cacattcggc gcgccgacca atacgacatt cagaccttcg
      781 cgcaaaatcg cgccctgctg cgcgttggca agcacatcat ccacggcgcg gcgcaagccg
      841 tccagtttgc cgcgtgcgtc tgccgcttcg agaaaatcaa tgtcttcctc gggaaaatct
      901 aacgtcgctt cgaccagcat ccgcaaggta atcaagtctt cgaccagacc gtgtatccgc
      961 cgcgaaaaat cgcccttgag cgagcgcaaa gccagacgcg ccgccgaacg gctggatgcg
     1021 tcaatcaaat ccgccacgcc ttccgcctgt gccaagtcca gtttgtcgtt caaaaacgca
     1081 cgcttcgtaa actcgcccgg ttcggcaagg cgcgcgccca attccaaaca gcggttcagc
     1141 agcatatcca tcaccaccgg cccgccgtgt ccctgaagct cgatgacatc ttcacccgta
     1201 aaacttgccg gtgcggcaaa aaacagcaaa agcccgctgt cgattgcctg tccgtccgtg
     1261 tccgtaaaat cagcataggt tgcggtacgc ggcttgggcg ttttcccgca caaagcctgc
     1321 gccatcggca gcaggttttt ccccgatatg cgtatcacgc ccacgccgcc gcgccctggt
     1381 gcggtagcga ctgccgcaat cgttggaacg ttatccgaca taaaaccccc gaaaattcaa
     1441 aacagccgcg attatagcaa atgccgtctg aagtccgacg gtttggcttt cagacggtat
     1501 aaaaccgcaa aaatgcttga taaatccgtc cgcctgacct aatatataac catatgaaaa
     1561 aacgaaacac atacgccctc ctgctcggta taggctcgct gctgggtctg ttccatcccg
     1621 caaaaaccgc catccgcccc aatcccgccg acgatctcaa aaacatcggc ggcgattttc
     1681 aacgcgccat agagaaagcg cgaaaatgac cgaaaacgca caggacaagg cgcggcaggc
     1741 tgtcgaaacc gtcgtcaaat ccccggagct tgtcgagcaa atcctgtccg acgagtacgt
     1801 gcaaataatg atagcccggt gtttccattc gggaccgttg ccgccgccgt ccgacttggc
     1861 gcaatacaac gacattatca gcaacggggc agaccgcatt atggcaatgg cggaaaaaga
     1921 acaagccgtc cggcacgaaa ccatacggca agaccaaacc ttcaacaggc gcgggcaact
     1981 gtacggcttc atcagcgcca tcctgatact gctttttgcc gtcttcctcg tatggagcgg
     2041 ctaccccgca accgccgcct cccttgccgg cggcacagtg tttgccttgg cgggtgcttt
     2101 cgtgattgga agaagccgag accaaggcaa aaattaatga caaatcctag ggcgtgcttc
     2161 atatccgccc gaacgccgaa ccgcacatat aggcacatcc cgcgcgccgc ccggaagcgg
     2221 aagccgcgcc ctcccaaaca aacccgaatc ccgtcagata aggaaaaata atgaaaacaa
     2281 ccgacaaacg gacaaccgaa acacaccgca aagccccgaa aaccggccgc atccgcttct
     2341 cgcctgctta cttagccata tgcctgtcgt tcggcattct tccccaagcc tgggcgggac
     2401 acacttattt cggcatcaac taccaatact atcgcgactt tgccgaaaat aaaggcaagt
     2461 ttgcagtcgg ggcgaaagat attgaggttt acaacaaaaa aggggagttg gtcggcaaat
     2521 caatgacaaa agccccgatg attgattttt ctgtggtgtc gcgtaacggc gtggcggcat
     2581 tggtgggcga tcaatatatt gtgagcgtgg cacataacgg cggctataac aacgttgatt
     2641 ttggtgcgga aggaagaaat cccgatcaac atcgttttac ttataaaatt gtgaaacgga
     2701 ataattataa agcagggact aaaggccatc cttatggcgg cgattatcat atgccgcgtt
     2761 tgcataaatt tgtcacagat gcagaacctg ttgaaatgac cagttatatg gatgggcgga
     2821 aatatatcga tcaaaataat taccctgacc gtgttcgtat tggggcaggc aggcaatatt
     2881 ggcgatctga tgaagatgag cccaataacc gcgaaagttc atatcatatt gcaagtgcgt
     2941 attcttggct cgttggtggc aatacctttg cacaaaatgg atcaggtggt ggcacagtca
     3001 acttaggtag tgaaaaaatt aaacatagcc catatggttt tttaccaaca ggaggctcat
     3061 ttggcgacag tggctcacca atgtttatct atgatgccca aaagcaaaag tggttaatta
     3121 atggggtatt gcaaacgggc aacccctata taggaaaaag caatggcttc cagctggttc
     3181 gtaaagattg gttctatgat gaaatctttg ctggagatac ccattcagta ttctacgaac
     3241 cacgtcaaaa tgggaaatac tcttttaacg acgataataa tggcacagga aaaatcaatg
     3301 ccaaacatga acacaattct ctgcctaata gattaaaaac acgaaccgtt caattgttta
     3361 atgtttcttt atccgagaca gcaagagaac ctgtttatca tgctgcaggt ggtgtcaaca
     3421 gttatcgacc cagactgaat aatggagaaa atatttcctt tattgacgaa ggaaaaggcg
     3481 aattgatact taccagcaac atcaatcaag gtgctggagg attatatttc caaggagatt
     3541 ttacggtctc gcctgaaaat aacgaaactt ggcaaggcgc gggcgttcat atcagtgaag
     3601 acagtaccgt tacttggaaa gtaaacggcg tggcaaacga ccgcctgtcc aaaatcggca
     3661 aaggcacgct gcacgttcaa gccaaagggg aaaaccaagg ctcgatcagc gtgggcgacg
     3721 gtacagtcat tttggatcag caggcagacg ataaaggcaa aaaacaagcc tttagtgaaa
     3781 tcggcttggt cagcggcagg ggtacggtgc aactgaatgc cgataatcag ttcaaccccg
     3841 acaaactcta tttcggcttt cgcggcggac gtttggattt aaacgggcat tcgctttcgt
     3901 tccaccgtat tcaaaatacc gatgaagggg cgatgattgt caaccacaat caagacaaag
     3961 aatccaccgt taccattaca ggcaataaag atattgctac aaccggcaat aacaacagct
     4021 tggatagcaa aaaagaaatt gcctacaacg gttggtttgg cgagaaagat acgaccaaaa
     4081 cgaacgggcg gctcaacctt gtttaccagc ccgccgcaga agaccgcacc ctgctgcttt
     4141 ccggcggaac aaatttaaac ggcaacatca cgcaaacaaa cggcaaactg tttttcagcg
     4201 gcagaccaac accgcacgcc tacaatcatt taaacgacca ttggtcgcaa aaagagggca
     4261 ttcctcgcgg ggaaatcgtg tgggacaacg actggatcaa ccgcacattt aaagcggaaa
     4321 acttccaaat taaaggcgga caggcggtgg tttcccgcaa tgttgccaaa gtgaaaggcg
     4381 attggcattt gagcaatcac gcccaagcag tttttggtgt cgcaccgcat caaagccaca
     4441 caatctgtac acgttcggac tggacgggtc tgacaaattg tgtcgaaaaa accattaccg
     4501 acgataaagt gattgcttca ttgactaaga ccgacatcag cggcaatgtc gatcttgccg
     4561 atcacgctca tttaaatctc acagggcttg ccacactcaa cggcaatctt agtgcaaatg
     4621 gcgatacacg ttatacagtc agccacaacg ccacccaaaa cggcaacctt agcctcgtgg
     4681 gcaatgccca agcaacattt aatcaagcca cattaaacgg caacacatcg gcttcgggca
     4741 atgcttcatt taatctaagc gaccacgccg tacaaaacgg cagtctgacg ctttccggca
     4801 acgctaaggc aaacgtaagc cattccgcac tcaacggtaa tgtctcccta gccgataagg
     4861 cagtattcca ttttgaaagc agccgcttta ccggacaaat cagcggcggc aaggatacgg
     4921 cattacactt aaaagacagc gaatggacgc tgccgtcagg cacggaatta ggcaatttaa
     4981 accttgacaa cgccaccatt acactcaatt ccgcctatcg ccacgatgcg gcaggggcgc
     5041 aaaccggcag tgcgacagat gcgccgcgcc gccgttcgcg ccgttcgcgc cgttccctat
     5101 tatccgttac accgccaact tcggtagaat cccgtttcaa cacgctgacg gtaaacggca
     5161 aattgaacgg tcagggaaca ttccgcttta tgtcggaact cttcggctac cgcagcgaca
     5221 aattgaagct ggcggaaagt tccgaaggca cttacacctt ggcggtcaac aataccggca
     5281 acgaacctgc aagcctcgaa caattgacgg tagtggaagg aaaagacaac aaaccgctgt
     5341 ccgaaaacct taatttcacc ctgcaaaacg aacacgtcga tgccggcgcg tggcgttacc
     5401 aactcatccg caaagacggc gagttccgcc tgcataatcc ggtcaaagaa caagagcttt
     5461 ccgacaaact cggcaaggca gaagccaaaa aacaggcgga aaaagacaac gcgcaaagcc
     5521 ttgacgcgct gattgcggcc gggcgcgatg ccgtcgaaaa gacagaaagc gttgccgaac
     5581 cggcccggca ggcaggcggg gaaaatgtcg gcattatgca ggcggaggaa gagaaaaaac
     5641 gggtgcaggc ggataaagac accgccttgg cgaaacagcg cgaagcggaa acccggccgg
     5701 ctaccaccgc cttcccccgc gcccgccgcg cccgccggga tttgccgcaa ctgcaacccc
     5761 aaccgcagcc ccaaccgcag cgcgacctga tcagccgtta tgccaatagc ggtttgagtg
     5821 aattttccgc cacgctcaac agcgttttcg ccgtacagga cgaattagac cgcgtatttg
     5881 ccgaagaccg ccgcaacgcc gtttggacaa gcggcatccg ggacaccaaa cactaccgtt
     5941 cgcaagattt ccgcgcctac cgccaacaaa ccgacctgcg ccaaatcggt atgcagaaaa
     6001 acctcggcag cgggcgcgtc ggcatcctgt tttcgcacaa ccggaccgaa aacaccttcg
     6061 acgacggcat cggcaactcg gcacggcttg cccacggcgc cgttttcggg caatacggca
     6121 tcgacaggtt ctacatcggc atcagcgcgg gcgcgggttt tagcagcggc agcctttcag
     6181 acggcatcgg aggcaaaatc cgccgccgcg tgctgcatta cggcattcag gcacgatacc
     6241 gcgccggttt cggcggattc ggcatcgaac cgcacatcgg cgcaacgcgc tatttcgtcc
     6301 aaaaagcgga ttaccgctac gaaaacgtca atatcgccac ccccggcctt gcattcaacc
     6361 gctaccgcgc gggcattaag gcagattatt cattcaaacc ggcgcaacac atttccatca
     6421 cgccttattt gagcctgtcc tataccgatg ccgcttcggg caaagtccga acacgcgtca
     6481 ataccgccgt attggctcag gatttcggca aaacccgcag tgcggaatgg ggcgtaaacg
     6541 ccgaaatcaa aggtttcacg ctgtccctcc acgctgccgc cgccaaaggc ccgcaactgg
     6601 aagcgcaaca cagcgcgggc atcaaattag gctaccgctg gtaaccgccg gatatgccga
     6661 aaggggtctg acgatgccac cgtgcgctgt caaacccttt ttctgccgcc gccttgtgcc
     6721 tgctccattg tctgataacc gtcaaattga tttttagccc atgtttggtg ggtcggggaa
     6781 atctatatct tcgtccgtgc cgaaatagtc tgagaccttt gcaaaattcc tttccctccc
     6841 gacagccgaa acccaaacac aggttttcgt ctattttcgc cccaaatacc tcctaattct
     6901 acccaaatac ccccttaatc ctccacgga
//
LOCUS       DAXHRP010000114         6813 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.114, whole genome shotgun sequence.
ACCESSION   DAXHRP010000114 DAXHRP010000000
VERSION     DAXHRP010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.114"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(107..418)
                     /locus_tag="ACFM72_001593"
     CDS             complement(107..418)
                     /locus_tag="ACFM72_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HFC6258140.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
     gene            947..3226
                     /gene="nrdA"
                     /locus_tag="ACFM72_001594"
     CDS             947..3226
                     /gene="nrdA"
                     /locus_tag="ACFM72_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HFC6258141.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEARLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            3284..4297
                     /gene="dcm"
                     /locus_tag="ACFM72_001595"
     CDS             3284..4297
                     /gene="dcm"
                     /locus_tag="ACFM72_001595"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HFC6258142.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            4290..5477
                     /locus_tag="ACFM72_001596"
     CDS             4290..5477
                     /locus_tag="ACFM72_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction endonuclease"
                     /protein_id="HFC6258143.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            5538..6671
                     /gene="nrdB"
                     /locus_tag="ACFM72_001597"
     CDS             5538..6671
                     /gene="nrdB"
                     /locus_tag="ACFM72_001597"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HFC6258144.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
BASE COUNT         2025 a         1437 c         1520 g         1831 t
ORIGIN      
        1 gctgcggcaa cgggaggacc tcaaacgaaa tggcgtaagg atagtttgtt gtatctatgg
       61 aaaatgccgt ctgaacctgt gttcagacgg catattttat atgggattaa cggcggaaac
      121 tgccgccgtc gaaatcatcg aaagcctcat aagccgcccg gcattggatt ttctgttccg
      181 cataaggcag ggagcggaat gctttgcgcg cctttttgtt ttcgcgcaat tcctgcacgt
      241 tgccttgcga tcggtaccac gcggcacggc gttccaaata tttcctgcat tcggggtgca
      301 gcatctgctt gtttgccttg cggatatgtt tggtatcgcg gtgggcgggt tctgacgtac
      361 cggcagcggc agttgtcgat accagtccca atattgcaga caacagtatg gcaagcatct
      421 ttttgacaga catgacgatc ctttcagttt gtcattcttt ccagtatagg atggaaggat
      481 ggaacgggca aattgtcggc agtttcagac tcattcagcc gacaaaactt gccgtttgat
      541 atgcagattc aaataacaca ttaatctcaa taataaattc caatcggtaa gaaaatggaa
      601 tttgtcggcg gcggcgcggc aaaatcatac tttgcaaaat ttaacaattt gcaggggcag
      661 aaaacaggaa gctttccttt ttcgtcggaa aatccttatt tcaccgcctt gtagccggag
      721 ccggtcaaaa ggcaaaaaat ttacccgttt tttatcggta aagaattatc agataaaaca
      781 aatattatag gaaaaatacg acaggcgggt tttatcgcgc attgcctgaa actgaaaaat
      841 acaaccgttg tcaagactgg agaaaatgcc aaaaatccac tatattgtct gccttaattt
      901 atttgaaaag actgtgtctt gaatatcaag agtggaagag gaagcgatga atacaccgac
      961 tgatttgaaa gtaaccaaac gagacggaag attagaagcc attgatttgg ataagattca
     1021 ccgtgtcgtc acttgggcgg cggacggatt ggaaaatgtt tccgtgtcgc aggtcgagtt
     1081 gaaatcgcac atccagttct acaacggcat ccgcaccgac gacatccacg aaaccatcat
     1141 caaagccgct gccgatttaa tttcggaaga taccccggac taccaatacc ttgccgcgcg
     1201 tttggcgatt ttccatcttc gtaaaatagc ctacggcgag tacgagccgc cgcaccttta
     1261 cgaccacgtt aaaaaactta ccgatgccgg aaaatacgac aggcatatcc ttgaggatta
     1321 cagccgcgaa gaatttgacg aactgaacgc ctatatcgac cacgaacgcg atatgtcctt
     1381 ttcctatgcc gctgtcaaac agctcgaagg caaatatctg gtacagaacc gcgttacccg
     1441 ccaaatttac gaaacgccgc agtttttata tgttttggtg gcgatgtgcc ttttcagcaa
     1501 atacccgaaa gaggcgcgct tgggttacgt caaacggttt tacgatgccg tttctacatt
     1561 taaagtatcg ctgccgactc cgattatgag cggcgtgcgt acgcctacgc gccagttctc
     1621 aagctgtgtg ctgattgaat gcgacgatag tttggattcc atcaatgcca ctaccagcgc
     1681 gattgtgaaa tacgtttccc agcgtgcggg catcggcatc aatgccggac gtatccgcgg
     1741 tttggacagc gaaatccggg gcggcgaagc gcggcatacc ggctgcattc ccttctttaa
     1801 aatgtttcag gcggcggtca aatcctgttc gcaaggcggc gtgcgcggcg gcgcggcaac
     1861 cttgttctac cccttgtggc atatcgaagc cgaaagcctg ctggtgttga aaaacaaccg
     1921 cggtgtggaa gacaaccgta tccgtcagct tgattacggc gtgcaaatca accgcctgct
     1981 gtacacccgc ctgattaagg gcggcaacat tacgctgttt tcgcccaacg aggttccggg
     2041 attgtacgaa gcgttttttg ccgaccaaga cgaatttgag cggctctata cgaaatacga
     2101 gcaagaccct gatatccgca agcgcatcat tccggctgcc gacctgtttt ccacgctgat
     2161 gcaggagcgt gccggaaccg ggcgcatcta cattcaaaac gtcgatcact gcaatacgca
     2221 cagcccgttc gatccgcgcg tcgcgcctgt tcatcagtcc aacttgtgta tggaaatcgc
     2281 cctgccgacc aaaccgctgg acaatatcaa cgatccgaac ggcgaaatcg ccctgtgtac
     2341 actgtctgcc tttaacttgg gcgcattaaa cagcttggac gaattggaag ggcttgccga
     2401 cttgaccgtt cgtgcgctcg atgcactttt agattatcag ggatatccgg tagaagccgc
     2461 gcgtacctct actatgggcc gccgttcgct cggcatcggc gtgattaact atgcttatta
     2521 tctggcgaaa aacggtgtcc gctacagcga cggttccgcg ctcggtctga cccaccgtac
     2581 ctttgaagcc atacagtatt acctgctcaa agcatcggca aaccttgcca aagaatacgg
     2641 tgcgtgcacg ctctttaacc aaaccgttta ttcgcaaggc aaactgccca tcgacactta
     2701 caaaaaagat ttggatgccg tctgcggcga gcctttgcat tacgactggg aaagcctgcg
     2761 tgccgaaatc gtcaaatacg gcctgcgcaa ctctactctg accgcgctca tgccgtctga
     2821 aaccagctct caaatcgcca acgccaccaa cggcatcgag ccgccgcgcg gattggtaac
     2881 ggtcaaagca tcgaaagacg gcattttgaa acaagtcgtg ccggagtttg aaaccctgaa
     2941 aaatgcctat gaaaccctgt ggcagcttcc cggcaacgaa ggctacctga aacttgtcgg
     3001 cgtgatgcaa aaattcgtcg atcaatcgat ttccgccaat accgcctacg acccgggcaa
     3061 attcgaaggc ggcaaagttt ctatgaaaca aatgctcaaa gacctgctga ccgcctacaa
     3121 atacggcgtc aaaaccctgt actaccataa cacccgcgac ggtgcggacg atacgcagac
     3181 cgatattcag gatgacggct gcgcgggcgg ggcttgtaag atttgatgaa agggggagtt
     3241 ttcagatggc ctttagatta ataaatcatc tgaaatataa aatatgaaaa ataaaataca
     3301 aaatcaatta gataatatag ttaccttaaa taatgagaaa tttactttta ttgatttatt
     3361 tgcgggaata ggtggttttc gcattgcaat ggagaatgtt ggtgggcgat gtgtattttc
     3421 tagtgaatgg gatgataaag cccgtcaaac ctaccaagta aattttaatg atattcctta
     3481 tggagatatt acattaaagg aaaccaaagc agctattcca agtaagtttg atgtattaac
     3541 agcaggattc ccgtgtcagc cattctctat agctggtgtt tcaaagaaaa aaagcctagg
     3601 acgagaaaca ggcttcttag ataaggcgca gggaactcta ttttttgatg ttgctgaaat
     3661 tattggaaaa catcgaccta aaatttttct tttagagaat gtgaaaaacc ttgtttcgca
     3721 tgacaaagga aatacattta aagtaattaa agggacttta gaagagcttg actatcagat
     3781 attttatcaa gttatgaatg caaaatatta tgttcctcaa aatagggagc gtatttttat
     3841 tgtaggtttt gatagacaat attttaataa ggaaataaat ttcaattttc cttccccacc
     3901 agaatcacaa ccaaaattaa agcaaatttt ggaagatgat gtagataatt cttttactct
     3961 ttctgataac ttatggcttt accttcaaaa ttacgctaaa aaacataagg caaagggtaa
     4021 tggatttggt tttggattag ttgatttaga tggaatatca cgaactctat ctgcacgata
     4081 ttacaaagat ggttccgaaa tactcatccc tcagaaagga aaaaatccta ggaagctgac
     4141 acctagggag tgctcgcgtt taatgggatt tcctaaagat tttgttattg atgcagtatc
     4201 caagacagct gcatacaagc agtttggcaa ttcaattgct gtaccgttgg ttcaagctat
     4261 tgctaaacaa attataaatg agttaaaaaa tgaatgactt ggcagctcag acaatacaag
     4321 tagtaaataa atccgatgac ttagtagctt cagcaataca gacagcaaat aaatcaattg
     4381 cagtatactg tcgttatatt cgtcccaatg atgttggtac tactggtagt caccaatcag
     4441 gattttatat tcaaaaacat ttttcagacg acctctttga tgtagtttgc caaaagggaa
     4501 caaataaaac tatttcaatc aaaattaatt ggcaagatgg aagcgtcact aatagcaatt
     4561 ttaaatatta cggccaaggc acgagaaatg aggcgagaat tacgggtttt ggcaagaatt
     4621 ttgaattttt aagtgataaa tatagtggtt ccttattggt attgtgcaga gcttgttata
     4681 aagatttatt attccatgct tttgttttat cttcagatga agatattgaa atatttatcg
     4741 cagaaactaa cattttacca ggaagtttat atttacctaa aaaacaagaa gtagaggata
     4801 acctaacaaa attattttca ctatttccta acttccccaa aactgaagaa atggcagttt
     4861 tggcaaggga aaatattgca ttaaataaaa ctaacgttag taatgtgtta aaacaatggg
     4921 tttcaaagga atatgaatta ttttccattt ttgaaaaacg tgaatttgaa attattaaat
     4981 caaaaattac tgatttggat agcttcatta attttgcaca ttcttttaca aatcgcagaa
     5041 aagcaagagc aggaaaatct ttagagttac atttatcaag aatatttgac gaattttcct
     5101 taaaatttga gacgcaagcg aagacagaag ggaaaaagaa accagatttt ttatttcctg
     5161 gaagtgaaga gtaccatgcg atggatgaat cagggaattt catatttcaa actgaaaagc
     5221 tgacaatgct aggttcaaag actacttgta aggatcgctg gcgccaagtt ttaaatgaag
     5281 cagatcgaat tcctcataag catttattta ctctacaaga aggtatatct gatactcaaa
     5341 ttcaggaaat gagtgatgag aatttaacct tagttgtccc taaagaatcc gtaaaaacat
     5401 ttggaacttt tgggaaaacc catgttttaa ctttagaaaa ttttattaaa tatataaagt
     5461 ctcagcaggt tagttaaaac ttacagatca tttttaatta atatagagaa tagattatgt
     5521 cctgcgaaca cttaactatg tcatacagca cctttcccaa aaccaaaaac gacgcgctga
     5581 atgagccgat gttttttggt cagccggtta atgttgcccg ttatgaccag cagaaatacg
     5641 aagtatttga aaaactgatt gaaaaacaat tgtctttctt ctggcggcct gaagaaatcg
     5701 atgtctcgcg cgaccgtatc gactacgcca atctgcccga acacgaaaaa catattttca
     5761 tcagcaatct gaaataccaa acactgctcg attccatcca agggcgcagt ccgaatgttg
     5821 ccttgctgcc tttggtttcg attcccgagt tggaaacgtg gattgaaacg tggagcttca
     5881 gcgaaaccat acactcgcgc agctataccc acatcatccg caatattgtg aatgatccgt
     5941 cggtcgtgtt tgatgatatt gtcgaaaacg aatacattac cgcccgcgcc gaagacattg
     6001 cctgctatta cgatgactta atcgaataca cccagtatta caacctgttg ggcgaagggg
     6061 tgcacaatgt cggcggcaaa cccgttaccg tgtctttgcg cgggttgaag aaaaaactct
     6121 atctctgcct gatgtgcgtc aacgtgttgg aagccatccg tttctacgtt tcattcgcct
     6181 gctcgtttgc ttttgccgag cgcgagttga tggaaggcaa cgccaaaatc atcaaactga
     6241 ttgcccgcga cgaagccctg cacctgaccg gcacgcagca tatgcttaat ctgatgcgtt
     6301 ctggtgttga tgattctgaa atggcagaaa ttgccgccga gttgcaggac gaatgtttcc
     6361 aactcttcaa aaaagcggcg gaacaggaaa aagaatgggc ggcatatttg tttaaagacg
     6421 gttcgatgat tggtttgaac aaagaaatct tatcccaata cgtcgaatat attaccaatc
     6481 tgcgtatgca ggcggtgggg ttgccggccg gatttgaagg cgcaaatcaa aacccgattc
     6541 cgtggattaa tgcgtggctg tcgtccgaca acgtacaggt cgcaccgcag gaagtggaaa
     6601 tatcctctta tttgatcggt cagatagatt ctgaagtgaa tacggatgat ttgggcgatt
     6661 ttgagttgta aatgtttttt gaaaaaatgc cgtctgaagc cggatgtttc agacggcatt
     6721 tgtatgttgt atgatgggaa aaacagcggg taggatcggt tattgttcct tttatagtgg
     6781 attatagtgg attatagtgg attaacaaaa atc
//
LOCUS       DAXHRP010000115         6507 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.115, whole genome shotgun sequence.
ACCESSION   DAXHRP010000115 DAXHRP010000000
VERSION     DAXHRP010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.115"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            175..1233
                     /gene="alr"
                     /locus_tag="ACFM72_001598"
     CDS             175..1233
                     /gene="alr"
                     /locus_tag="ACFM72_001598"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HFC6258145.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLIRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTKGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1297..2652)
                     /locus_tag="ACFM72_001599"
     CDS             complement(1297..2652)
                     /locus_tag="ACFM72_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HFC6258146.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAASKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVKRGGRIPAPVQSMK
                     N"
     gene            complement(2667..2939)
                     /locus_tag="ACFM72_001600"
     CDS             complement(2667..2939)
                     /locus_tag="ACFM72_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HFC6258147.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3064..3801)
                     /locus_tag="ACFM72_001601"
     CDS             complement(3064..3801)
                     /locus_tag="ACFM72_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC6258148.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIHHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4082..4981)
                     /gene="prmB"
                     /locus_tag="ACFM72_001602"
     CDS             complement(4082..4981)
                     /gene="prmB"
                     /locus_tag="ACFM72_001602"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC6258149.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5126..5719
                     /locus_tag="ACFM72_001603"
     CDS             5126..5719
                     /locus_tag="ACFM72_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258150.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5831..>6507
                     /locus_tag="ACFM72_001604"
     CDS             5831..>6507
                     /locus_tag="ACFM72_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HFC6258151.1"
                     /translation="MTKLYAEIAKMETQDDGTVKVWGYASSEAVDSDGEVIAAAAMKA
                     AIPDYMKFGAEREMHGSNAAGTAIEINVEDDGRTFFVAHIVDPVAVTKVKTGVYKGFS
                     IGGSVTAHDELNKSQITGLKLTEISLVERPANPDAVSTCFKADKGAETVNNDTEHNAT
                     YFSHFPSKQKSTGGSRCPFLYRFPYFFTAGSTGLAGPFGAGAPTEAWSFSFASTAGPM
                     PFTLVKSS"
BASE COUNT         1745 a         1646 c         1515 g         1601 t
ORIGIN      
        1 tttgggaaag cgattatatc aggaaaagca aaccgccttc ctacctaaaa actgctgctt
       61 cggcttgaag atacaagggt ctttaatatt ttaaaagcct tgccgttgga ttataattcc
      121 ctaattgatt tcttaatttt gctaataaac acttgtttgg taaggaatga atttatgcgc
      181 cctttgaacg tgcagatcag gttgggcaac cttaggcaca attatcggat tttgaaggaa
      241 atgcacggag gcaaactgtt ggcggtagtg aaggccgacg catacggaca cggtgcggtc
      301 agatgtgctt tcgcgctggc agacttggca gacggctttg ccgtggcgac aatcgatgaa
      361 ggaatcaggc tgcgggagag cggcattacc catccgattg tccttttgga aggcgtattt
      421 gaagcatcgg aatacgaagc ggtcgaacaa tactcgcttt ggccggcagt cggaaaccaa
      481 tggcagcttg aggctttgct gatccgccat tggaaaaaac ccgtcaaagt ctggttgaaa
      541 atggattcgg ggatgcaccg taccggtttt ttccctcatg attacgcttc ggcatatgcg
      601 gcattgaaac agtcggaata tgtggacagt attgtcaagt tctcgcattt ctcctgtgcg
      661 gacgaacccg aaagcggtat gacggaaata cagatggaag cattcgattt gggtacgaaa
      721 gggctggaag gcgaagaaag ccttgccaat tcggcggcta ttttgaatgt tcccgaagca
      781 cgcagggatt gggggcgcgc gggcttggcg ttatacggca tttccccgtt cggaggcagc
      841 gatgacaggc tgaaacccgt gatgaggctt tcaacccgta tttttggcga acgcgtttta
      901 cagccgcact cccctatcgg ttatggcgca acattttata ccagcaaatc tacgcgcgtc
      961 ggtctgattg cctgcggtta tgcggacggt tatccgcgcc gcgccccaag caattccccc
     1021 gtcgccgtcg acggtaaatt gacccgggtc atcggcaggg tctctatgga tatgatgacc
     1081 atcgagctgg acgcttcgca agaaggtttg ggacacgagg tcgaactgtg gggcgatacg
     1141 gtcaacatca atactgttgc cgaagcggcc ggaaccatcc cttacgaatt gatgtgcaat
     1201 atcaaacgtg caaaattcac ttatatcgag taatcaagtc caaacaaaaa tgccgtctga
     1261 agcctttcag acggcatttc cccatcaaaa ccgcaatcag tttttcatcg attggaccgg
     1321 agcgggaatt ctgccgcccc gtttgacgaa cacttcgcac gaaccttctt ttaccggcat
     1381 cacaggtgcg tagcccaaca ggccgccaaa ctcgacgctg tcgccgacgg ttttaccggt
     1441 taccggaata atgcgcacgg cagtggtttt actgttaatc ataccgatgg cggcttcgtc
     1501 ggcgataatg ccggaaatgg tgtgcgcggg tgtgtcgccg ggaacggcaa tcatatccaa
     1561 gccgaccgaa caaacggcgg tcatcgcttc gagtttatcc aacgtcagca cgcctgcttc
     1621 ggcggcggca atcatacctt cgtcttcgga aacggggata aacgcgccac tcaaaccgcc
     1681 aaccgcgctc gaagccatca tgccgccctt tttcacggca tcgttcagca atgccaaagc
     1741 tgctgttgtg ccgtgcgtac cgcagacgct caaacccatt tcttcaagaa tgcgcgccac
     1801 cgagtcgccg acggcagggg tcggtgccag cgacaagtcg agaataccaa acgggatatt
     1861 cagcattttt gaggcttcgc ggccgatgag ttcgcccacg cgggtaattt tgaaagcagt
     1921 tttcttcact acttccgcaa cttcggtcaa tgtcgttgca tctgaatttt ccaacgcggc
     1981 ttttacgaca cctgggccgg atacgccgac attgataacg gcatccgctt cgcccgaacc
     2041 atgaaacgcg cccgccataa acgggttgtc ttccaccgca ttgcagaaca cgacgatttt
     2101 cgcgcagccg aaaccttcgg gcgtaatttc agccgtgcgt ttgatggttt cgcctgccag
     2161 cttgaccgca tccatattga taccggcacg cgtactgccg acattgatgg agctgcacac
     2221 gatgtcggtg gtcttcatcg cttcgggaat ggaacggatt aacacctcgt ctgaaggcga
     2281 catgcctttt tgcaccagcg cggaaaagcc gccgataaag gacacgccga tggctttggc
     2341 agccttgtcc aaagtctgcg ccacgctgac gtaagaatcg gctttgctcg ccgccgcgat
     2401 ttgggcaatc ggcgtaacgg aaatgcgctg attcacaatc ggcacgccgt atttggcaga
     2461 cagatatttt gccgtcgcca ccaagtcttt gccgaccgtg gtaattttgt tgtaaatgtt
     2521 ttggtttaac acgtcgatgt cggtgctgat gcagtcgtgc aaatcaatgc cgatggtaat
     2581 ggtgcggaca tcgaaattct ggtcggcaac cattttgacg gtttctaaaa tttcgccgga
     2641 ttggatactc atcacattcc tccgactcaa atgcggtgca tcgcttggaa gatttcttca
     2701 ttttgcatac ggatatcaag cgcgagtttt ttgctctctt ccgcaaacaa atccaaaacc
     2761 tcctgccgag atttggggca tttcgaggta tccaccaaga taatcatggt aaaaaaatca
     2821 tccatcagct gttggctgat attaaggatg ttgattcggt tttccgccaa aattttggaa
     2881 acatcgtaca cgatgccgac gcggtcttta ccgatgacgg tgatgactga attgttcaca
     2941 ggcttactcc ttgcagatat ccgttaaagt ccgaaattat accaccatcg gattttgagg
     3001 aaatattgtc aacaatatat acatacaaaa tgccgtctga aactatttca gacggcatca
     3061 aatttagggt tcgattaaat aaccatcctt atcccactgg gttttcctaa ccaacttatc
     3121 atcctgataa acagcttcac tctttttaga accatcttca taccactcta agactactcc
     3181 attacgttta tgatgatgga tagacagttc cgagagtaat cgaccgcttt catcccatgt
     3241 cagaatcttg gcaggctcat cattgaccat aaccatttcc gttttgatat tgccgtcggc
     3301 ataccattgc ttccatacgc cgtttgcctt attctgttta aactggattt cgctttcctt
     3361 gccgccgtta cggtaatagc ggtaccccgt accttcactc aaaccatttt tataaggcat
     3421 aacggcagat tttttaccgt tcggatacca gttgacccac tccccgtccg gcttaccctt
     3481 gctgaagccc cccgccattt ttttctgacc attaaaatgc cacaaaatca acataccgtt
     3541 ttgcagggta ggcacaaaag atttgatttg cgttgaagca acgatataag gttcggaata
     3601 tttcttcatc gacggataat aaaaatcctg cgcgtgcgca ataccctccg ccacactata
     3661 ttgcctgata taagcggcag aagacatcgt cgccgtcagt ttcccgttct gattaaaata
     3721 aacagaatag gtctgcgccg gcaaagcggc cgaaaaaccc aacaggacag ttgaaaatac
     3781 aatccgagat aattttttca ttgcaatagc gatataaaaa caaggctgtg ttttagtaat
     3841 cttttgattt caattatttg caagggaaaa gacaattatt ttccggttag gaataaacct
     3901 attctattga atatattgaa gccaagtacg cctatcaaca ctatattaaa acactgccaa
     3961 aaacaattaa cttataaaca atatggtaag gatttctctg ccaagcatca aacccgagac
     4021 aacgtatcgt aaaaatgccg tctgaaaaca aatcgtcttc agacggcatt tccccttcaa
     4081 ctcactcttc acccaataac tgctcgcgcg tcaagaggaa aacaaaaccg tcgcccccgc
     4141 tggtttccaa ccaagtaaaa ggcaactccg gatacgctgc ttccaataca tccctgttat
     4201 gcccgatttc caccagcaat acacctttgg gattcagaaa ctttgccgca ttcagaagaa
     4261 tctgcctggt ggcatccaac ccgtccgccc cgctgcccaa tgccaattcc ggttcgtgca
     4321 aatactcttc aggcaataac tcaaccgatt ccgcatccac ataaggcgga ttggaaacaa
     4381 tcaaatcata agtgccttcc aatccttcaa acaaatccgt atgaataagc cggatgcgtt
     4441 cttccaaacc ataatcttcg acattaatcc ctgccacttc caaagcatcc aagctcacat
     4501 caaccgcatc aatttgggca tcaggataat gatgcgccat ctgaatggca aggcaaccgc
     4561 ttccggtgca aagatccaaa gcattatgca ccagctcatc gtattctatc caaggacgaa
     4621 gtccgttacc caacaattca taaataaaag aacgaggtat gattacgcgc tcatccacat
     4681 agaaatcaaa ctctccctgc catgcctggt gtgtcaaata agcggctgga atgtgttcga
     4741 cagcacgacg ctcaataacc gccagcactt cctctttttc agcttccaag agttttgcat
     4801 caagatatgg ggcaagcata tccaaaggca aattcaaagt atgcagaatc aaataagccg
     4861 cttcatcatg cgcattatct gttccatgac caaaaaagag ccctgcctca ttaaaacggc
     4921 tgactgcaaa acgtaaaata tcgcggatag tcgtcaattc ttgtgctgcc tgattaaaca
     4981 taatatgaac cattctgcgt atagatactt ttaattataa cagaaacaac aagcaaacct
     5041 tttcatatcg ccaaataacc acccaatcta cccatacaac tacataaatg cccgcgcgaa
     5101 aaccatcgcc cgaacggaaa cgacaatggc cgacggtatg ggcaatctga ttggctggga
     5161 aaaaacgggg cttgttgtcg gtaagcagtg gataaccgca aaagacgaca aggtgtccga
     5221 tgtctgcaat gccaacggcg agatgggcgt aatcgggctt tacgagcctt tctcacacgg
     5281 cgcattgacg atacccggtc atccgaactg ccgatgcgag gttgtttccg tatcgggtgg
     5341 cgaattgggg gaatttgccg aaaaaaagga gcttcgtaaa gcggctatgc agtatgcgcg
     5401 ggataacttt atcggcaaaa gctatgtcaa tgaaaacagc gggcatgaac tgaaggtaac
     5461 ttggcaaggt gtgaaacacg ctgcgtcaaa ggcaaatcag gcggaattat ccatcatgac
     5521 aaaacttgat gacttattgc gctacgcaaa atatgagggt tcttattcgg ataggaaagg
     5581 tcatcctaat attattgcag cacataagta tcgtgccgtt gccaaggttg ggaatgagtc
     5641 tttaaatatc ggtgtgattg taagggaatt tccagacgac cataaacatt acgaccattt
     5701 catcttgaag gatgaataaa gcccttttgc agtgtcgttc tggagcggat agcgttaagg
     5761 caagtacact tccagccttg aaaaagggct ttaaattcag catgccattt atacaggcag
     5821 gagtaaaccc atgacaaagt tatacgcaga aatcgccaag atggagacgc aggacgacgg
     5881 cacggtcaag gtttggggtt acgcttcaag cgaggcggtc gattccgacg gcgaagtcat
     5941 cgcggcggca gctatgaagg cggcgattcc cgattatatg aagtttggcg cggagcgcga
     6001 gatgcacggc tcaaacgctg cgggaacggc aattgaaatc aacgtggaag atgacggcag
     6061 aacctttttc gtggcgcata tcgtcgatcc cgttgccgtg acgaaggtca aaacaggcgt
     6121 ttacaagggc ttttccatcg gcggcagcgt taccgcccac gatgagttga acaagtcgca
     6181 aatcacgggt ttgaagctga cggaaatcag ccttgtcgag cgccctgcca atcccgatgc
     6241 ggtgtctacc tgctttaagg cggacaaagg tgcggaaacg gtaaacaacg atacagaaca
     6301 taatgctaca tattttagcc atttcccttc caaacaaaaa agcaccggcg gcagccgatg
     6361 ccccttcctt tacaggttcc cctatttttt cactgcgggc agcaccggtt tagctgggcc
     6421 ttttggtgcg ggcgcgccga ccgaagcctg gtccttcagc ttcgccagca ccgcagggcc
     6481 gatgcccttt accttggtca aatcgtc
//
LOCUS       DAXHRP010000116         6494 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.116, whole genome shotgun sequence.
ACCESSION   DAXHRP010000116 DAXHRP010000000
VERSION     DAXHRP010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6494
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.116"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(59..1093)
                     /gene="purM"
                     /locus_tag="ACFM72_001605"
     CDS             complement(59..1093)
                     /gene="purM"
                     /locus_tag="ACFM72_001605"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HFC6258152.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGVGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(1613..1697)
                     /locus_tag="ACFM72_001606"
     tRNA            complement(1613..1697)
                     /locus_tag="ACFM72_001606"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1661..1663),aa:Leu,seq:tag)
     gene            1851..2528
                     /locus_tag="ACFM72_001607"
     CDS             1851..2528
                     /locus_tag="ACFM72_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258153.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            2521..3114
                     /gene="ribA"
                     /locus_tag="ACFM72_001608"
     CDS             2521..3114
                     /gene="ribA"
                     /locus_tag="ACFM72_001608"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HFC6258154.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            3282..4295
                     /locus_tag="ACFM72_001609"
     CDS             3282..4295
                     /locus_tag="ACFM72_001609"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC6258155.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGILFDLQQLADKKVDLILHPSSLNYHVIPKGADFSDNDFVRHFETLVEGRYYIANA
                     WTKIVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGGSISH
                     NIKYKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNII
                     VIYRKYFSFKEKCRKIFGAKAIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKF
                     FSE"
     gene            4510..5847
                     /gene="ribBA"
                     /locus_tag="ACFM72_001610"
     CDS             4510..5847
                     /gene="ribBA"
                     /locus_tag="ACFM72_001610"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HFC6258156.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(6007..6123)
                     /locus_tag="ACFM72_001611"
     CDS             complement(6007..6123)
                     /locus_tag="ACFM72_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC6258157.1"
                     /translation="MPSERLSDGILFGLENTYAVLSLKERIQKTKATGIYRK"
     gene            complement(6155..>6494)
                     /locus_tag="ACFM72_001612"
     CDS             complement(6155..>6494)
                     /locus_tag="ACFM72_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HFC6258158.1"
                     /translation="DASGLGEKIKDGKNQKTVLSREEEQKICNTFTHKQAVEDFSVVV
                     GYDEIKAKNYSLSAGQYFEVKIDYVDISAEEFKQRMAGFSADLDKLFAESAKLEKEIK
                     DRLAMLEFNS"
BASE COUNT         1601 a         1705 c         1587 g         1601 t
ORIGIN      
        1 cctctataaa aatgccgtcc aaacccatgt ttgagacggc atttcgctat agaagcaatc
       61 aggcaacctg ggtttgatgc tcgtctccct gacgctcacg gatcaaacct aaacggtaaa
      121 ctgtttcacc ttgttcaccc aagagaccct gaaccgcatc ggcatcttcg gcagcaacaa
      181 taacgaccat gccgatgccg cagttaaagg ttcggtacat ttcttgggtt tccacattgc
      241 ccgccttttg aagccattgg aagagcttgg gcaattccca cgatttagca tcgatttgtg
      301 caaccgtgtt ttcaggcaac acgcgcggca cgttttcggt aatgccgccg ccggtaatgt
      361 gtgccatacc tttaatggta aatttttcca aagcggcaag aatcggtttc acatacagac
      421 gggtcggcgc aataacagcc tcccgcaagg ttttgccatt atcaaactcg gcatccagat
      481 cgggattgtc gcgttcgatg attttacgga taagggaata gccgtttgaa tgtgcgccgt
      541 tggaagccaa acccaatacc acatcgccta cgccgatgct gcggccggta atgacattct
      601 ctttttccac cacgccgacg gcaaaacccg ccaaatcgta ttctccgacg ggatacatac
      661 ccggcatttc ggcagtttcc ccgccaatca gggcgcaacc ggattcttcg caaccttggg
      721 caatgccttt aataacatcg gtcgcgcgcg gaacatccaa tttaccgcag gcaaaatagt
      781 ccaagaaaaa caagggctca gccccttgaa ccaaaatatc gttgacactc attgcaacaa
      841 ggtcgatgcc gaccgtatca tgtttatccc aatcaaaggc aagcttgagc ttggtaccca
      901 cgccgtccgt accgctgacc aatacgggat tttgatattt cttgccgatt tcgaccaatg
      961 cgccaaaacc gcccaaatcc cccaatactt ccgggcgcat cgtgcgtttg gcaaacggtt
     1021 tgatgttttc gaccagttgg tcgcctgcgt cgatatcgac acctgcatcg cggtaactca
     1081 atgaagtact catcgttttt ccttggtaaa tggggattgg acggtaaaat aacggggcgt
     1141 attctacctt atttcacgtt tgcaggttca gatttttaga caatattgta aacagtccgc
     1201 catatgcccg cgcgtgtcgg gtttggcggg accgtccgca ggattaacgg gcagaaaccc
     1261 gcctgccctt cccctcaatt ccttatatat cgcgttccat caaaagacgc attgcttttc
     1321 ttaaccattc cttttggcag acgagcggaa ggggtttttt gatgccatca tcaaaatcaa
     1381 tattttcttc tttccggttg aaaccccggc attaggggtg gtgaatctga ttgcgtgcgg
     1441 aagcacccgt ttccgattcg gtgcggaaca aatggcggca ctttatgtac cgttctgcgt
     1501 gttgaaacat ataggcagat aaaaaagccg cccgctgaaa agcagacgac ttatgttttg
     1561 tggcactaat ttgtcccgat aagcattaac tatataattt atttatcatt attggtgcgg
     1621 acggagagac tcgaactctc acacctctcg gcgccagaac ctaaatctgg tgcgtctacc
     1681 aatttcgcca cgtccgcatg ggaattggac gattatacag attttgtttt tttgtgcaag
     1741 gttttcggcg gggctgttga tggcttgggg tttggggcgg taaaatctgt ttttcgtccg
     1801 cctgacatcg gaatcgggcg gttttttgtt tttattgacg gaatttgggt atgcctgctg
     1861 ctttgattaa ggattttctg ctgactcagg gtttgaagct gccgcttgac gaggttcggg
     1921 cggcgtatct gacggcgcag acggtaatgg atatggggac ggcttcgata gaccgttcgg
     1981 ttttgtggcg cagtgatgag ggttggaaac ttgccgatta cctgtcgtgc gacaatgtcc
     2041 gcgaagatgc actgaaacgg cttttcatgg ctttggattc ggtgttttcg cgctcgacag
     2101 gcgtgcggag tgcggcggtc tatgccttga tgccatctga aaaccaggct ttccaactga
     2161 tatgcctgtc ccgacagggc gaggttttgg aaaacctgtg ggatttggat gaagcggcag
     2221 gcaaggtttc gctggcttgc cgttcggcgc aaagcggttg gatgaatgtt gcctcggatg
     2281 tacgccgttg gttggatttg ggggagcttt cgggagaacg caatcatgct tcggcggcgc
     2341 aaatttccat tccggtctgc acggaaagtg gcggtgtgtt gggcgtggtt catgtggaat
     2401 ttgaatgcgc agagtgtgcg ggtacggcag cacaggtgga atgggtggct cttgccttgg
     2461 ctttgtccga acctttgaaa ctgctgttgg gtatgtctgc cggaaaagat gggagtgaag
     2521 atgtctgaaa tgttgaacca tgtggcatcc tgccgcctgc cgaccgaatg gggcgtattt
     2581 acgatgcacg gctttgaaga ggcaaacggg caggaacacg tcgcgctgac cgtcggtaat
     2641 ttttcagacg gcaatccggt tctgacgcgc atccactccg aatgcctgac gggcgatgcg
     2701 ctgttctcga gaaaatgcga ctgcggacct caacttgaag cggccatgag ggcggtacag
     2761 acagaggggc gcggcatcat cgtctatctg cgtcaggaag gacgcggcat cgggctgatt
     2821 aacaaaatcc gcgcctatca tctgcaagac caaggtatgg atacggttga agccaatttg
     2881 gcactcgggc tgcccgtcga tgcccgcgat ttccgtttgg cgcaatctat ctacgaatat
     2941 ctgggcatcc gctcggtcaa actgctgacc aacaaccccg aaaaaatcca aaccctgaaa
     3001 gatgcgggga ttaacgtggt cgaacgcatc cccctgcacg tcggggaaaa ccttgaaaac
     3061 aaacgctacc tccaaaccaa agcagacaag ctgggacatc tgatgtcgga ataaggcaaa
     3121 gttgcaggga acgggcatcc tgcgccgcct ttcgggaaac aggtttccat accttgataa
     3181 agcaataagt tttataaagt tacagggtgc ggatgcaaac gcattgcggg tgcgggtttg
     3241 aggcatacgc gcaaacatct taatataatg gattgatatt tatgattttc tccatcatcg
     3301 tccctattta caatgtggaa aaatacctcc gctgctgcgt ggattccgtg cttgccgaaa
     3361 attttgccga ttatgaaatg attttggtcg atgacggttc gccggatggc tgcgggaaga
     3421 tttgcgacga atatgcaggc aaatatccgc atataaaagt gattcatcaa gaaaacggcg
     3481 ggctgtcgga tgcccgcaac gccggtatcc gagcggcaaa aggcgattac ctgatctttt
     3541 tggacagcga cgactattgg gccgatacca accgttcaaa aaacgcgggg ggggggattc
     3601 tctttgattt acaacaactt gcagacaaaa aggttgattt gatcctgcat ccctcgtccc
     3661 tcaattacca cgtcatcccc aaaggggcgg acttttcgga taatgatttt gtccgccatt
     3721 ttgaaacgtt ggtggagggg cggtactata tcgccaacgc gtggacaaaa atcgtcaggc
     3781 gggaaataat catcaaaaac aatctgtttt tcccaaaagg atacattcac gaggatttcc
     3841 cgtacagttt gcaattggcg cgttttatca agacttttgc cttttacgat aacccttttt
     3901 accagtaccg cgttctcggc ggctctatca gccacaacat caaatacaaa aatttcagcg
     3961 atgtgctgac gcatctcgac cggggtgtgg attttttagt cgaaaacaaa aattccccca
     4021 tctacggcgg tttgcaaaaa tttgtcttcg acaatatcgg ctatctgagg tctatattgg
     4081 taaggcttta tttttccaaa aacattatcg tcatctaccg gaaatatttt tcatttaaag
     4141 aaaaatgcag aaagatattc ggcgcgaagg caatccgtcc ggtttttatc gggaagaccg
     4201 cattcatcat aggattgccg atattgcgcc tgctcgtacc gcctatgctg tacccggcaa
     4261 tcaaggccgt ttatcaaaaa tttttttcgg aataagcttc cggcaaaccc cgaatcggaa
     4321 gcgggcggga agaaacagcc gccccgccgg cggggttgcg gcaatgccgt ctgaagccac
     4381 gaatccggct tcagacggca tctgtttacc aaaaagcaaa taattcggtt tggcaaaaaa
     4441 aacagatttg ctttttggta aatactcgct tacaatccgc tacatccgat ttctacaaag
     4501 gatgaaacga tgaccgacac agccggtctg cgccgccgca acctgcggca atggatagca
     4561 gaacactacg gcggtttgca aacccgtttt gccgaagccg ttgccctcaa cacaggcgaa
     4621 ctctccgccc ttttgaaaaa caaatccttc ggcgagaaaa aagcccgtaa aatcgaacag
     4681 gcggcaaaaa tgcccgcctt ctggctcgat accgaacaca ccgcccgccc gcccgaacac
     4741 acaggaaaac acaccatgtc ccatatttcc cccatccccg aaatcctagc cgacatcaaa
     4801 gccggcaaaa tggtcatcat caccgatgcc gaagaccgag aaaacgaagg cgacctgctg
     4861 atggcggcgc aattcgtcac gcccgaagcc atcaacttca tgatcaaaca cgcgcgcggc
     4921 ttggtctgcc tgccgatgga cggcgaaatg gtcgaaaaac tcgggctgcc gatgatgacc
     4981 caaaaaaacg gcgcgcaata cggcaccaac tttaccgtct ccatcgaagc cgcacacggc
     5041 attaccaccg gcatttccgc cgccgaccgc gccctgacta ttcaaaccgc cgtttccccg
     5101 accgctaaac ccgaagacat cgtccaaccc ggtcatatct ttccgcttcg cgcccaaaaa
     5161 ggcggcgtac tcgtccgcgc cggacacacc gaagccggcg tcgacctggc gcaaatgaac
     5221 gggctgattc ctgcctccgt tatttgcgaa atcatcaacg acgacggcac gatggcgcgt
     5281 atgcccgaac tgatgaaatt cgccgaagaa cacaagctca aaatcggcac gattgccgac
     5341 ctcatcgaat accgcagccg taccgaaagc ctgcttgaag acatgggcaa tgcgcctgta
     5401 caaaccccgt ggggcgagtt ccaacaacac gtttacgtcg acaaactctc cggcgaaacc
     5461 cacctcgccc tcgtcaaagg cacgccctcc gccgacaccg aaaccctcgt ccgcgtccac
     5521 gaacccttca gtgtgatgga cttcattcaa gccaacccgc gtcattcatg gtcgctgccc
     5581 aaagcactcg agcgcatcca acaggccgaa agcggcgtag tcatccttct gcaccgcacc
     5641 gaagacggcg catccctgct cgaccgcacc ctgcccaaag gcgcaaacca agcctacaaa
     5701 tgggacagca aaagctacgg catcggcgca caaatcctcg ccggcctcaa cgtcaaaaaa
     5761 ctgcgcgtcc tcgggcagcc ctcatctttc accggcctga ccggcttcgg tttggaagtc
     5821 gtcggctttg aagaagcgga aaaataatat agtaaattca aatactttat atttgcttta
     5881 tttattgcat tatttccgtg caaacgaaaa cacggtctgt tgggttggat tttgtttttg
     5941 caaatttcgg gtaacttcta attcgtcatt cccgcgcagg cgggaatccg gttcgtcggg
     6001 tttttgtcat ttccgataaa ttcctgtggc tttggttttt tggattctct ctttcaggga
     6061 aagaacggca taagtatttt ccaaaccaaa caaaatgccg tctgaaagcc tttcagacgg
     6121 cattttaagt ttgaccggtt tcattcatcg gtatttacga attgaattcc aacattgcca
     6181 gcctatcctt aatctccttt tccaatttgg cagattccgc aaagagtttg tccaaatctg
     6241 ccgaaaatcc tgccattctc tgcttaaatt cctcggcgga aatatccaca taatcaatct
     6301 tcacctcgaa atactgcccc gccgacaggc tgtaattctt ggctttgatt tcatcgtagc
     6361 cgaccaccac gctgaaatct tccactgcct gtttgtgcgt gaaagtattg caaatttttt
     6421 gttcttcttc gcgggagagt acggtttttt ggtttttgcc gtctttgatt ttttcgccca
     6481 agcccgatgc gtcg
//
LOCUS       DAXHRP010000117         6440 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.117, whole genome shotgun sequence.
ACCESSION   DAXHRP010000117 DAXHRP010000000
VERSION     DAXHRP010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.117"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            142..1683
                     /locus_tag="ACFM72_001613"
     CDS             142..1683
                     /locus_tag="ACFM72_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC6258159.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGGQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAGSDKAVAPVMPSPPQSVEEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            1712..2311
                     /locus_tag="ACFM72_001614"
     CDS             1712..2311
                     /locus_tag="ACFM72_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HFC6258160.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVELIRRHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            2308..2901
                     /gene="nadD"
                     /locus_tag="ACFM72_001615"
     CDS             2308..2901
                     /gene="nadD"
                     /locus_tag="ACFM72_001615"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HFC6258161.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSIRIL
                     SAPMHNASSTEIRRAGVSDGIPPAAARYIREHGLYEK"
     gene            2960..3346
                     /gene="rsfS"
                     /locus_tag="ACFM72_001616"
     CDS             2960..3346
                     /gene="rsfS"
                     /locus_tag="ACFM72_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HFC6258162.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            3400..3870
                     /gene="rlmH"
                     /locus_tag="ACFM72_001617"
     CDS             3400..3870
                     /gene="rlmH"
                     /locus_tag="ACFM72_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HFC6258163.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            3943..4209
                     /locus_tag="ACFM72_001618"
     CDS             3943..4209
                     /locus_tag="ACFM72_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HFC6258164.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWMAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            4366..5049
                     /locus_tag="ACFM72_001619"
     CDS             4366..5049
                     /locus_tag="ACFM72_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HFC6258165.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            5173..5685
                     /gene="coaD"
                     /locus_tag="ACFM72_001620"
     CDS             5173..5685
                     /gene="coaD"
                     /locus_tag="ACFM72_001620"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HFC6258166.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            5717..6373
                     /locus_tag="ACFM72_001621"
     CDS             5717..6373
                     /locus_tag="ACFM72_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HFC6258167.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNKESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRCGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFDYQNRQIEIVAPLKNEWQTENIHRALEEFCMENKID
                     "
BASE COUNT         1407 a         1697 c         1856 g         1480 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat atttcagacg gcgggaggaa ggcggatacg
       61 gtatgtagtc ggattgaaat atacggtatg tgggggcttt tgggtacaat cgcaacatca
      121 gtgtttcaag tggggaaggc gatggatgga cggcgttggg cggtatgggg tgcttttgcc
      181 ctgctgcctt cggctttttt ggcggtaatg gtcgttgcgc ctttgtgggc ggtggcggcg
      241 tatgacggtt tggcgtggcg cgcggtgctg tcggatgcct atatgctcaa acgtttggcg
      301 tggacggtat ttcaggcagc ggcaacctgt gtgctggtgc tgcctttggg cgtgcctgtc
      361 gcgtgggtgc tggcgcggct ggcgtttccg gggcgggctt tggtgctgcg cctgctgatg
      421 ctgccttttg tgatgcccac gttggtggcg ggcgtgggcg tgctggctct gttcggggcg
      481 gacggcctgt tgtggcgcgg cgggcaggat acgccgtatc tgttgttgta cggcaatgtg
      541 ttttttaacc ttcctgtgtt ggtcagggcg gcgtatcagg ggtttgtgca agtgcctgcg
      601 gcacggcttc agacggcacg gacgttgggt gcgggggcgt ggcggcggtt ttgggacatt
      661 gaaatgcccg ttttgcgccc gtggcttgct ggcggcgtgt gccttgtctt tctgtattgt
      721 ttttccgggt tcgggctggc gctgctgctg ggcggcagcc gttatgccac ggtcgaagtg
      781 gaaatttacc agttggtcat gttcgaactc gatatggcgg ttgcctcggt gctggtgtgg
      841 ctggtgttgg gggtaacggc ggcggcggga ttgctgtatg cgtggttcgg cagacgcgcg
      901 ggttcggata aggcggttgc ccctgtgatg ccgtcgccgc cgcaatcggt ggaggaatat
      961 gtgctgctgg cgtttgcggc ggcggtgttg tctgtgtgct gcctgtttcc tttgttggca
     1021 attgttgtga aagcgtggtc ggccggcgaa tcgtggcgtg tgttaatgga aagtgaaacg
     1081 tggcaggcgg tgtggaatac tttgcgcttc tcggcagcgg cggtgtatgc ggcggcggtt
     1141 ttgggtgtgg tgtatgcggc ggcggcgcgg cggtcggcgt ggatgcgcgg gctgatgttt
     1201 ttgccgttta tggtgtcgcc ggtttgtgtt tcggcgggcg tgctgctgct ttatccgcag
     1261 tggacggctt cgttgccgct gctgctggcg atgtatgcgc tgctggcgta tccgtttgtg
     1321 gcaaaagatg ttttatcagc ctgggatgca ctgccgccgg attacggcag ggcggcggcg
     1381 ggtttgggtg caaacggctt tcagacggca tgccgcatca cgttccccct cttgaaaccg
     1441 gcgttgcggc gcggtctgac tttggcggcg gcgacgtgtg tgggcgaatt tgcggcaacc
     1501 ttgttcctgt cgcgtcccga gtggcagacg ctgacgactt tgatttatgc ctatttgggg
     1561 cgtgcgggtg aggataatta tgcgcgggca atggtgttga cattgctgtt gtcggcgttc
     1621 gcgctgggca ttttcctgct gttggacaac ggcgaaggcg gaaaacagac ggaaacgtta
     1681 taatgtgaac cctttttcag aggacggcaa aatgagcgag ttggataaca tccttgccca
     1741 taaccggcag tttgtcgagt cgggcgaata tgaaaaatac tttaccgaca aataccccga
     1801 acgcgggctg gcagttttgt cctgtatgga tgcgcggatt atcgggctgc tgcccgacgc
     1861 gttgggtttg aaaaacggcg atgccaagct gattaaaaat gccggcgcgc tggttacgca
     1921 cccgtggggt tcggtgatgc ggagcctttt ggttgccgtg tttgaattga aggtcagaga
     1981 gattatggtc atcgcccatc acgattgcgg tatgcagggg ctgaatgccg aagaattcct
     2041 cgggcgcgtc cgggaaagcc ggattcccga agaccgtatc gaaaccctgc gttatgcagg
     2101 tgtcgacctc gacggctggc tgaccggttt cgacaacgtc gaagacagcg tgcgccatac
     2161 tgtcgaactc atccgccgcc atccgctgat gccgcgccat atcgccgttc acggattggt
     2221 catccatccc gttaccggca aactgacgct ggttgtggac ggcagtgttt cagacggcat
     2281 ggacttatcg gaaggaatgg aaacatcatg aagaaaatcg gactgttcgg cggcactttc
     2341 gacccgatac acaacgggca tctccacatc gcccgcgcct ttgccgacga aatcggcttg
     2401 gacgcggttg ttttcctgcc gacaggcggc ccgtatcaca aagacgccgc ctccgcttcc
     2461 gccgccgacc gccttgccat ggtcgaactg gcgacggcag aagacgcgcg ttttgccgtc
     2521 agcgactgcg acatcgtccg agaaggtgca acctatactt tcgacaccgt ccaaatcttc
     2581 cgccagcagt tcccgtccgc gcaactctgg tggctgatgg gcagcgacag cctgatgaag
     2641 ctgcatactt ggaaaaaatg gcagatgctc gtgcgcgaaa ccaatatcgc cgtcgccatg
     2701 cggcagggcg acagcctgca ccaaaccccg cgcgaactgc acgcatggct gggcaatgcc
     2761 cttcaggacg gcagcatccg catcttgtcc gccccgatgc ataacgcgtc gtcaacggaa
     2821 atccgccgcg ccggtgtttc agacggcatc ccacctgccg ccgcacgcta catccgcgaa
     2881 cacggtttgt atgaaaaata aagtcaaatc agtaagaaac ggctataatg ccgtctgaaa
     2941 acatcccgtt aggaaaataa tgaacgaaca agaactgcaa gacctgcaaa aaatggtcgg
     3001 ggtcgccgtc aacgccctcg aagacatcaa agccaaagac atttccgttc tcgaaacgca
     3061 agacaaaact tcgctgtttg ccagaatgat tatcgccagc ggcgacagta cgcgccaagt
     3121 caaagcactg gccaacaacg ttgccgtcga tttgaaagaa gccggttttg aaatcctcag
     3181 caccgaaggc gacagcggcg aatggacgtt ggttgatgca ggagacctcg tcgtccacgt
     3241 tatgctcccc gccgtgcgcg acttctatga tatcgacacc ctttggggcg gcgagaaacc
     3301 gagtttccac gccggaatgc agaagccgtg gcacgcggca gactgattcc cgatgccgtc
     3361 tgaatgttca gacggcattt tcctgtaagg gagaaagcat tgaacatcac cgttttggca
     3421 gtcggcacca aaatgccgcg ctgggttgat gaggccgtcg ccgaatacgc caaacgcttc
     3481 ggacgcgacg tcgcctacgc actcaaagaa atcaaacccg aaaaacgcgg cgcgggcgtg
     3541 aatgccgccc aaggtatggc ggcggaagaa aaacgcatcc ttgaagccat tccgcaaggc
     3601 gcgttcctcg tcgttcttga cgaacgcggc aaagcaccga cctccgtcga gctggcggaa
     3661 cacctcaaaa gctggcagca aaacggcgaa cacgtctgct tcgtcatcgg cggcgcggac
     3721 ggtatgaccg accgcctcaa acagcaggca cgcatgatga tgcgcctgtc cagcctgacc
     3781 ctgccgcacg ggatggtgcg cgtccttctg accgagcagc tctaccgcgc cgcctccatc
     3841 ctgcacaacc atccctatca tcgggaataa gaaggctttt gtccgtatcc ctaatcggtt
     3901 aaaatcaccc cgttatttct gaacacagca aaggaatccg ctatggcacg aatggtattc
     3961 tgcgtcaagc tcaacaaaga agccgaaggc atgaaatttc caccgcttcc caacgaattg
     4021 ggcaagcgca tttttgaaaa cgtatcgcaa gaagcatgga tggcgtggac gcgccaccaa
     4081 acgatgctga ttaacgaaaa ccgcttaagc cttgccgatc cgcgcgcgcg cgaataccta
     4141 gctcagcaga tggagcagta tttcttcggc gacggcgcgg atgccgtgca gggatacgtt
     4201 ccgcaataac ggttttccgt tttgaacaca ggctgtccga acctgcttca gacggccttt
     4261 aaaatacgcc ggacaacttt atcttcacgc aaccggacaa attttgacat tgggcaatgt
     4321 taaaatcccc cattattccc aaccgcgctt tcaggagcag atgatatgca acacgacgtt
     4381 tacgactaca ccgcgcatac ggtttctaaa aacaccgtcc tgcagaaaac ctaccgcctg
     4441 ctcggatttt cattcattcc ggctgccgca ggcgcggcac ttgccgccaa tgccggtttc
     4501 aatttttacg ccgccttcgg ttcgcgctgg atagggtttg ccgtcgtgtt ggcgtttttc
     4561 tacggtatga tccacttcat cgagaaaaac cgttacagca ataccggcgt taccctgctg
     4621 atggtattca cattcggtat gggcgtattg atcggccccg tgctgcaata cgcgctccat
     4681 attgccgacg gtgcgaaaat cgtcggcatt gccgccgcga tgaccgccgc cgtcttttta
     4741 acgatgtccg ccttggcgcg ccgaacccgg ctcgatatga acgcgctcgg acgcttcctg
     4801 accgtaggtg cggtcattct gatggtcgcc gtggttgcca atctgttttt gggtattccc
     4861 gcactcgccc tgaccatttc cgccggtttt gtcttgttca gttccttaat gattatgtgg
     4921 caggtacgca ccgtcatcga cggcggcgaa gacagccata tcagcgcggc actgacactg
     4981 tttatctcgc tttacaacat cttcagcagc ctgctgaaca tcctgttgtc tttaaacggc
     5041 gaggattgat gccggtaaaa cgccgtccga ctatgccgtc tgaaaatgct tcagacggca
     5101 ttttactttg ggcatacaat acggatgcac acgcaccaac acacagccga ctatgaagcc
     5161 gggaggaatc aaatgttacc gaatacaccg cgccgcgccg tttatgccgg cagtttcgat
     5221 ccgcccacat tggggcatct gtggatgata cggcaggcgc aatctatgtt tgacgaactc
     5281 atcgtcgcca tcggcattaa ccccgacaaa cgcagcacct ataccgtcgc tgaaaggcag
     5341 gatatgttgt gcgatattac taaaatgttt cccaacgtca gaaccgatgt atttgaaaac
     5401 cgatttctgg tgcattatgc ccgtgaggta gatgcaggat tcatcgtgcg cggcatccgt
     5461 tctgcttcgg attacgaata cgaacgttcc atgcgccaca tcaacagcga cctcgccccc
     5521 gaaatatcca ccgtattcct catgccgccg cgcgaaatcg ccgaagtgtc gtccactatg
     5581 gtcaaaggac tggtcgggcc ggaaggctgg acggaaacga tccaccgcta cgtgccgcaa
     5641 gctgtgtacg aaaaaatcct tgccgaacat caacacgaaa attgaaccct tctatttttg
     5701 caaggcatat atggatatgt tggaaatttt gttccgccat caagacttcg tcgccatcaa
     5761 caaaccgggc ggcatatccg tccaccaaga cagcggcgag accggactgg cccgaacact
     5821 cgccatacag ttgggcgtag agcgtgtgtg gctgctgcac cgattggaca aacagaccag
     5881 cggcatttta ctgtttgccc tcaacaaaga aagcgcgtcc gcccttagcg gacagtttgc
     5941 cggcaaaagc atcaaaaaaa cctatttggc actgtccgac cgcaagccgt ccaaaaagca
     6001 gggttggatt aaaggcggaa tggaaaaatc cagatgtgga atgtggaagt tgacgcgcaa
     6061 tacagaaaat atcgccgtta cccgattcca cagcatcagt atcgccgaaa aactgcggct
     6121 gttcatccta gaaccgcata cgggcaaaac gcaccaattg agagtggcga tgaaaagttt
     6181 gggcagtccg attctgggcg acagcttata cggcggaaca gaatccgaaa ccatgtttct
     6241 gtatgcatgg aaaatacaat ttgactacca aaaccgacaa atcgaaattg ttgcaccctt
     6301 aaaaaacgaa tggcagactg aaaatatcca tcgggcactg gaagaattct gtatggaaaa
     6361 taaaattgac tgatataaat taaatttata aacaaataga taaatatttt taaaaaaatt
     6421 tcttcagaaa agcattgacc
//
LOCUS       DAXHRP010000118         6340 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.118, whole genome shotgun sequence.
ACCESSION   DAXHRP010000118 DAXHRP010000000
VERSION     DAXHRP010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.118"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(73..1527)
                     /locus_tag="ACFM72_001622"
     CDS             complement(73..1527)
                     /locus_tag="ACFM72_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HFC6258168.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITSIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(1524..2225)
                     /locus_tag="ACFM72_001623"
     CDS             complement(1524..2225)
                     /locus_tag="ACFM72_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HFC6258169.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(2222..3001)
                     /locus_tag="ACFM72_001624"
     CDS             complement(2222..3001)
                     /locus_tag="ACFM72_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HFC6258170.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            3286..4692
                     /locus_tag="ACFM72_001625"
     CDS             3286..4692
                     /locus_tag="ACFM72_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC6258171.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADL
                     NESPLNMQLAVISYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLSISMGIVAGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            4804..6330
                     /locus_tag="ACFM72_001626"
     CDS             4804..6330
                     /locus_tag="ACFM72_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HFC6258172.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     MYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQAG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
BASE COUNT         1352 a         1826 c         1605 g         1557 t
ORIGIN      
        1 tgttaatcca ctatacaaat gccgtctgaa gccctgtttc gggtttcaga cggcattttt
       61 gcgaacaact ttttatgcct gttctttttg gcgcattttt tctgccatta gttcgtgcag
      121 ggttttcttc gccggtttca tcggcacgcg gttttgcgtc caacccaact gtttgcgcgg
      181 ggtcaggttg cggaacttgg tggctgccca accgaaggcg cggtaggttt tgctgccgct
      241 gaaaataccg ttgaatgtgc gccacgccat ttgttcgccg aaggtatgcg atgcgccttg
      301 cccccggatg gggtgcggca cggtttcggt cggcgaacgt tgcgcttcaa cgcgcaaacg
      361 ctgcatttgt tcggtaatcg ggatgcgtac cggacaaact tccacgcacg cgccgcacat
      421 cgtgcaggcg gtcggcaggt cgcgagtggc atccaagcct aacaggtgcg gggaaataat
      481 ctcgccaatc ggaccgggat aggttgtgcc gtatgccgcg ccgccgatgc gggtataaac
      541 cgggcaatgg ttcatacacg cgccgcaacg gatacattgc agggtgcggc gcatttggtc
      601 ttcggcataa gcctggctgc ggccgttgtc gagcagaacc aagtgcattt cttgcggacc
      661 gtctaattct tcactgcggc gcgggccggt aatcatattg aaataagtgg taatgttctg
      721 accaatggca gaacgcggca gcaggctgta caagggtggg atgtcggaca atttcgccac
      781 cactttttca atgctggtaa tagcgatatg cacgggcggt acggtggtac tcaagcgacc
      841 gttgccttcg ttttccacca gacacagcgt acctgtttca gcaacggcaa agtttacgcc
      901 actcaaaccg acatcggcag tgctgtaaat atcgcgcagt gctttacggg cgaagccggt
      961 cagttggtct acatcgtctg tcagcggcgt accgaggttt tggtggaaca gttcgctaac
     1021 ctgttctttg gttttgtgga tagcaggcat cacgatatgg gtcggttttt cgcctgccat
     1081 ttggacgatg aactcgccca agtcgctttc taccgcttta atgccttttg cttcaagata
     1141 atggttcagc tcgatttcct cgctgaccat cgatttgcct ttgaccatca gcttgccgtt
     1201 tttggctgtg atgatgtcgt ggataatttg gcaggcttcg gtcggggttt ctgcccagtg
     1261 cactttcacg cccaacttag tcaggttttc ttccagctgc tccagcaggg ctggcaattt
     1321 agacaatgag cgctgacgga cgtgttcgca caaatcgcgc aggctttgca gctcttcttc
     1381 gtcggtcaaa acggctttgc gtttggtcat cagcatatcc atcgcggtac gcaggctttt
     1441 gcgcaaaggc ttgtcttgaa gggaaattgc ggcgttttgc ttgaaagttt ccggcttcat
     1501 gtgaaatttg atggtttgcg tagtcatgcg ttttcctcca aatcggcagg ggaaatgtgg
     1561 tcgggcagga tggcgaggat gaccaaatcg cgcgggccgt gcgcgccgta agcaagcgtc
     1621 agttggatgt ctgcggtttt ggacgggccg gaaatcagga atacattggt cggcataccg
     1681 ttttccacca gtttttcgcc ttcgacggca ttatgaaact cgttgtacat cttggacgta
     1741 tcgaacaggc agaaatgcac gggcggaacg aggcttaaag tacgcggttc ttcggggctg
     1801 gaaaacagca tcagcgtgcc ggtgcgggcg atgccgcatt gcgcgccgct gaagcccgca
     1861 tcgatgttcg tgaaaaactc ggttttccaa gtatcgattt cgcgctcgaa ggcaatcggt
     1921 tcgatattgc tgtccgccaa tgcggcacgg gcaatttgtc cgtgttcggt cgccaagggc
     1981 agcaggatgt ttttcaaacc cttgccttct gccgcttcgc ggaaaacctg catccaattg
     2041 cttttcgtca cccaataaat ttcggttttg accgcacgca tagcggcagc ccaatgtttc
     2101 agacgctcaa cttcgctgcc ccaagaaaca cccatttcac ggtaataatc aaaaaccgca
     2161 ggttcttcca tcggcaatgc gtcggctttt ttcagttttg ccaaaatatt ttcacgcgcg
     2221 ctcatgcttt gcctccggtg cgttccaaca agaaggatgc gatatgtttc ggacgcggca
     2281 tatccggctc gtccttggcg attttgccgc cgatgttcat catacagccg cagtccgcgc
     2341 tgatgatttc ggttgcgccg gtttctttca gcgcggcgac tttgtctgtt accattgcgc
     2401 cggaaatatc ggcttgtttg acggagaatg tgccgccgaa gccgcaacat tcgctttcgt
     2461 ggtcgtggac gatgcgttcg acgttttcca taccgtcaat cagttgccag cctgaaagat
     2521 ggacattcat ttcgcggcgg gcggcgcagg aagtgtgaac ggcgactttg agcggttcgc
     2581 ccttgtcttc gggtttgaaa ccgatggcaa gcaggaaatg ggtaaactcg atgatgcggc
     2641 cggcgcaatc cacagccctt tcctcgtact cgctgccttt aaacagcgtc ggccagtggt
     2701 gtttcatcat gccgccgcac gagccggacg gcacgacgat cggccagttt tcagggaaaa
     2761 ggtcgagttg tgctttggcg acatcgaagg cttcggtcgg atggccggat gaataggcag
     2821 gctggccgca gcagctttgc gccatcggga aatggacgcg tatgccctgc tgctcgatta
     2881 gggtaatggc atccatgcct gcttcgggca taaaaagatc aaggacgcaa gtgccgaaaa
     2941 aatagacatc ggtcggattg ctgtcgtatc ggatgatttt tgggggaatg gttgcgctca
     3001 tgttttttga taacgggaaa cccgtttttc tctgtagaaa ggtaagcgtt tactttaagt
     3061 aattgactgt tgcgggtcaa gtctaatttt aaaaaataat ccggtttttc ttacaaactg
     3121 cccccataac gcttactgta ccttaatctg atggttttcg ataataatta tcattacaat
     3181 gcaatgccgg ttcgtttgct tgtgaacatt caagatgccg actctgacgg cattcagaca
     3241 gcatctgaaa acaataacgg cacaaggatg gggtacaatc gccctatgga aaaaaacacc
     3301 ctatccgccc gcgcaccatc cccttggctg ccgcttctgc tggcaattgc catttttatg
     3361 cagatgttgg atgcgaccat tttaaatacc gcactgcctg aaattgccgc cgacctgaat
     3421 gagtcgccat tgaacatgca gctggcggtt atttcctaca cgctgacggt tgccctgctg
     3481 attcctttga gcggttattt ggcggacagg ttcggaacga aaaaagtctt tttcggttcg
     3541 attgccgttt ttatgctcgg atcggcattg tgcgccgcat cgggttcgct gtttgaattg
     3601 acgctttccc gtgtcgttca gggcatcggc ggttcgatgc tggttccgat accgcgtctg
     3661 accatcttgc gtgtgtacga caagtccaag ctgctcaacg ccatcaatta tgcggttatg
     3721 cccgcattaa tcggaccggt tttagggcct ttggcgggcg gttatctggt cgaatacgct
     3781 tcgtggcact ggattttcct gctcaacctg cccatcggtc ttttgggttt catattggga
     3841 cgcaacatca tgcccgatat taaaggcagc aatatctctt tagacttcaa aggttatctg
     3901 attttttctg ccgccgcgtg cctcttgtta ctttcggcag aaagcctgtc gcacgcgctg
     3961 cctccgtatt ttgcactgtt gccgctgtgc ggcggactgc tgtttgcacg ccgttatttc
     4021 cgacatatga aaaccgcgtc caaaccgatt tattccgccg acctgtttct gatacgcact
     4081 ttccgtctag gactggcggg caatctgttc agccgtctcg gcatcagctc gattcctttt
     4141 ctgatgcccc tgatgtttca agtcgctttc ggcttcggcg caagcctgtc gggttggctg
     4201 gtcgcccccg tcgccctgtc ttcgctgctg gtcaaaccgc tgattgcacc gctcatgaaa
     4261 cgtttcggct accgcacggt actgctttgg aacaccaagc tgcttgccgc cttcatcatg
     4321 ctgctcgccc tgcctgatgg aaactcgccg ctgtggattt ggattttcct ctcgctggcg
     4381 atcggcgcgt gcaactccct acagttttct gccatgaaca cactgaccct cgccgatttg
     4441 cgcccgcaac agaccggcag cggcaacagc ctgatggcgg tcaaccaaca gctttccatc
     4501 agcatgggca ttgttgccgg cgcattaatc cttaaaaact ggacatttct gataccggct
     4561 tcttcaggtc tgcattccgc cttccgtatg accctgctca gtatcggcgg cattaccctt
     4621 gcctcgtcgt tggttttcaa gcgtctgcac gtttcagacg gtgcaaacct gacacggaac
     4681 acaccgtcct aaagcggtcc gcacgcaaaa cttttacccg tttcaacgtt tggattatga
     4741 ttccgcactt ccatgcgcgc caaccccaaa acacaggcaa tgccgtctga aaccatatcc
     4801 ctgatgaaaa cacgcagcct aatttccctt ttatgcctcc ttctctgttc atgttcttca
     4861 tggttgcccc cactggaaga acggacggaa agccgtcatt tcaatacttc caaacccgtc
     4921 cgcctggaca acatcctgca aatccggcac acccctcata ccaacgggct atccgatatc
     4981 tatctgttga acgaccccca cgaagccttt gccgcacgcg ccgcccttat cgaatctgcc
     5041 gaacacagcc tcgatttgca atactacatc tggcgcaacg acatttccgg ccgactgctg
     5101 ttcaacctga tgtaccttgc cgcagaacgc ggcgtgcgcg tacgcctgct gttggacgac
     5161 aacaacacgc gcggattgga cgacctcctg ctcgccctcg acagccatcc caatatcgaa
     5221 gtgcgcctgt tcaacccctt cgtcttacga aaatggcgcg cactcggcta cctgaccgac
     5281 ttcccccgcc tcaaccgccg catgcacaac aaatccttta ccgccgacaa ccgcgccacc
     5341 atactcggcg gacgcaatat cggcgacgaa tacttcaaag tcggtgagga caccgttttc
     5401 gccgacctgg acatcctcgc caccggcagc gtcgtcggcg aagtatcgca cgacttcgac
     5461 cgctactggg caagccattc cgcccacaac gccacgcgca tcatccgcag cggcaacatc
     5521 ggcaagggtc ttcaagcact cggatacaac gacgaaacgt ccagacacgc gctcctgcgc
     5581 taccgcgaaa ccgtcgaaca gtcgcccctc taccaaaaaa tacaggcagg acgcatcgac
     5641 tggcagagcg tccaaacccg cctgatcagc gacgaccctg caaaaggact cgaccgcgac
     5701 cgccgcaaac cgccgattgc cgggcggctg caagacgcgc tcaaacagcc cgaaaaaagc
     5761 gtctatctgg tttcacccta tttcgtcccc acaaaatccg gcacagacgc actagcaaaa
     5821 ctggtgcagg acggcataga cgttaccgtt ctgaccaact cgctacaggc gaccgacgtt
     5881 gccgccgtcc attccggcta tgtcaaatac cgaaaaccgc tgctcaaagc cggcatcaaa
     5941 ctctacgagc tgcaacccaa ccatgccgtc cctgccacaa aagacaaagg cctgaccggc
     6001 agctccgtaa ccagcctgca cgccaaaacc ttcattgtgg acggcaaacg catcttcatc
     6061 ggttcgttca acctcgaccc ccgttccgcg cgtctcaaca ccgaaatggg cgttgttatc
     6121 gaaagcccca aaatcgcaga acagatggag cgcacccttg ccgataccac ccccgaatac
     6181 gcctaccgcg ttaccctcga caggcacaac cgcctgcaat ggcacgatcc cgccacccga
     6241 aaaacctacc cgaacgaacc cgaagccaaa ctttggaaac gcatcgccgc aaaaatccta
     6301 tccctgctgc ccatagaaag tttattatag aaatatagcg
//
LOCUS       DAXHRP010000119         6274 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.119, whole genome shotgun sequence.
ACCESSION   DAXHRP010000119 DAXHRP010000000
VERSION     DAXHRP010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.119"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            80..1915
                     /gene="edd"
                     /locus_tag="ACFM72_001627"
     CDS             80..1915
                     /gene="edd"
                     /locus_tag="ACFM72_001627"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HFC6258173.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAIGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            2096..2734
                     /locus_tag="ACFM72_001628"
     CDS             2096..2734
                     /locus_tag="ACFM72_001628"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HFC6258174.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     HNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            2749..2967
                     /locus_tag="ACFM72_001629"
     CDS             2749..2967
                     /locus_tag="ACFM72_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258175.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(2991..4032)
                     /locus_tag="ACFM72_001630"
                     /pseudo
     CDS             complement(2991..4032)
                     /locus_tag="ACFM72_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            4195..5235
                     /gene="mutY"
                     /locus_tag="ACFM72_001631"
     CDS             4195..5235
                     /gene="mutY"
                     /locus_tag="ACFM72_001631"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HFC6258176.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQALAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVEQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            5652..6212
                     /gene="sodC"
                     /locus_tag="ACFM72_001632"
     CDS             5652..6212
                     /gene="sodC"
                     /locus_tag="ACFM72_001632"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HFC6258177.1"
                     /translation="MNMKTLLALAVSAVCSVSVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
BASE COUNT         1606 a         1755 c         1518 g         1395 t
ORIGIN      
        1 ccgtctgaat acccgataca aaaatcagaa acgcacaaac aaatccccaa tacccccccg
       61 ttccgacagg agaccgaccg tgaacactac tcctatccac tccaaactcg ccgaaatcac
      121 cgggcgcatt attgaacgca gccgtccgac gcgtgaaaaa tatctggcga agatccgcag
      181 tgccaaacaa atgggacgct tagagcgcaa ccagctcggc tgcagcaact tggcacacgg
      241 ctatgctgcc atgcctaaaa gtatcaaaat cgaaatgctt caggaaaccg tccccaactt
      301 aggcatcatc accgcctaca acgacatggt ttccgcacac cagccgttta aagacttccc
      361 tgaccaaatc aaagacgaag cgcagaaaaa cggcgcgacc gcccaagtcg ccggcggcac
      421 gcccgccatg tgcgacggca tcacgcaagg ctacgccggc atggaattgt cgctgttctc
      481 ccgcgacgtg attgccatga gtaccgccat cgggctgtcg catcaaatgt ttgacggcag
      541 cctgtttatg ggcgtatgcg acaaaatcgt tccaggtttg atgataggcg cgctttcgtt
      601 cggtcatatt ccgggtatct tcgtccccgc aggcccgatg tccagcggta tcggcaacaa
      661 agaaaaagcc cgcacccgcc agcttttcgc cgaaggcaag gtcggacgca acgaactttt
      721 gaaaagcgaa atgggttctt accacagccc gggcacctgc actttctacg gcacggcaaa
      781 ctccaaccaa atgatgatgg aaatgatggg cgtgcacctg cctgccgccg ccttcgtcca
      841 cccttacacc gacctgcgcg aagcgctgac ccgctacgcc gccggacacc tcgcgcgcgg
      901 catcaaaaac ggcacgatta aacctttggg cgaaatgttg accgaaaaat cctttatcaa
      961 cgccttgatt ggcctgatgg caaccggcgg ttcgaccaac cacaccatgc acctcgtcgc
     1021 tatggcgcgt gcggccggcg tgattttgaa ctgggacgac ttcgacgaaa tttcctccat
     1081 catcccgctg ctcatccgcg tttatccgaa cggcaaggcc gacgtgaatc actttaccgc
     1141 agcgggcgga ctgcctttcg ttatccgcga attgctgaat gcaggcctgt tgcacgacga
     1201 tgtcgatacc gtcgtcggac acggtatgcg ccactacacc aaagagcctt tccttatcga
     1261 cggcaaactc gaatggcgcg aagcccccga aaccagcggc aacgacgaca tcctgcgcaa
     1321 agctgacaac ccgttctccc ccgacggcgg tctgcgcctg atgaaaggca acatcggacg
     1381 cggcgtgatt aaagtgtccg ccgtgcgcga aggctgccgc attattgaag cgcctgccat
     1441 cgtgttcaac gaccaacgcg aagtgttggc tgcgtttgaa cgcggcgagt tggaacgcga
     1501 ttttgtgtgc gtcgtccgct accaaggccc gcgtgccaac ggtatgcccg aattgcacaa
     1561 actgaccccg cctttgggca tcctgcaaga ccgcggcttc aaagtggcgc tgctgaccga
     1621 cggtcgtatg tccggcgcat ctggcaaagt tccggcctcc atccacatga cacccgaagc
     1681 cctgatgggc ggcaacatcg ccaaaatccg taccggcgac ctgatccgct tcgactccgt
     1741 tagcggcgaa ctcaacgtcc tgattaacga aaccgaatgg aatgcccgcg aagtcgaaag
     1801 catcgacttg ggcgcgaacc aacaaggctg cggccgcgaa ctcttcgcca acttccgcag
     1861 catgaccagc agcgcggaaa ccggtgccat gagtttcggc ggcgaatttg cctgatgcgc
     1921 gtttcagacg gccttttcag accgaaggcc gtctgaaaaa ttattcaagt gttttaagat
     1981 agacgtaggt tggattctcg aatccgacac agccgtccaa gatgtcggtt tcttgaatcc
     2041 gacctacgac ctgtcccatc ttaataaaat accccattcc acccggagaa ccgaaatgtc
     2101 caaactgacc ccccgcgaaa ttttgaccgc cggcgcagtt gtgccggtaa tggcgattga
     2161 cgacttaagc accgccgtcg atttgtccca cgcccttgtc gaaggcggca tccccaccct
     2221 cgaaatcacc ctgcgcaccc ctgtcggcct cgatgccatc cgcctgattg ccaaagaagt
     2281 gcccaacgcc atcgtcggcg cgggtacggt taccaaccct gaacagctca aagccgtcga
     2341 agacgcaggc gcggttttcg ccatcagccc gggtttgcac gaatccctcg ccaaagccgg
     2401 ccacaacagc ggcatccccc tgattcccgg tgttgccacc ccgggcgaaa tccaactggc
     2461 tttggaacac ggcatcgaca ccctcaaact cttccctgcc gaagtcgttg gcggcaaagc
     2521 catgctcaaa gccctgtacg gcccttacgc cgatgttcgc ttctgcccga caggcggcat
     2581 cagcctcgcc accgcgcccg attacttggc actgcccaac gtcctgtgcg tcggcggctc
     2641 atggctgacg ccgaaagaag ccgtgaaaaa caaagactgg gacaccatca cccgtctcgc
     2701 caaagaagcg gcggcattga aacccaaagc ctgaaccgca tcgtaaaaat gccgtctgaa
     2761 gccctttcca gtctcagacg gcattttgcc gcttggcggc gcagtcggca tacacggcag
     2821 caccactccg acatactgcc cctaaaatgc ccatccgcct tccgcataat aaaaataacg
     2881 ttcagttcat tcgacagcag ccggacagcc catactacgc ggctgaaaaa atgccgtctg
     2941 aaacgcattc agacggcatc cgcttaaaaa aacaactgat tcaaggccga ttaatccgct
     3001 tccaaaacca ctttcatcac ttggttttcg gcggcgtgtt tgaacacgtc gtaggctttt
     3061 tccaattcgc tgaatttgaa atggtgggtc atcattttgg tgtaatcgac tgagctgctg
     3121 gaaattgcct tcatcagcat ttcggtggtg ttggcattga ccagaccggt tgtgatggcg
     3181 aggtttttaa tccagagttt ttccagtttg aaatcaacgg attggccgtg tacgccgaca
     3241 acggcgatat gaccgcccgg tttcacgatg tcttggcaca tattccaagt cgcaggaata
     3301 ccgacggctt cgatggcaca atctacgccg tcttcgccga caatggcaaa aacttgtttg
     3361 gagacatcgc ctgaggcggg gctgatggta tgggtcgcgc ccaactcttt cgccagtttc
     3421 aaacggtttt cgtccatatc gcacacgata atggcggcgg ggctatacag ttgggcggtc
     3481 aacaaggcgg acataccgac aggagcggca cctgcgatga atacggtgtc gccgggtttg
     3541 acatcgccgt attgcacgcc gatttcgtgt gcggtcggca aagcgtcgct caacaacagg
     3601 gcgacttctt cgttgacgtt gtcgggcagc ggcacgaggc tgttgtcggc ataaggcgtg
     3661 cggacgtatt ctgcctgcgt gccgtcaatc atgtagccca aaatccagcc gccgttgcgg
     3721 caatgcgaat aaagttggat tttgcagttg tcgcaagtac agcatttgct gacgcatgaa
     3781 ataatgactt tatcgccgac tttgatgttt tttacagcct cgccgacttc ttctacaata
     3841 ccgatgcttt catgaccgag aatacgaccg tcggcgactt cgggtttttt tgcctttcca
     3901 aatacccaaa tcggtaccgc aaatcgtggt tttgacgatt ttcaccaccg catcggtcgg
     3961 atcgataatc tgcggacggg gtttttcctc aaaacggatg tcgtttgcgc cgtgataaac
     4021 cattgctttc atgctgatac tccttgcttg ttgataaata atttcaatac cgcaataaag
     4081 tttctttata tgagttatat gcccctacaa aaaataagtc aataagaatt attttcacaa
     4141 tgttatacaa taacatacta ttttaaatat aaataaaacc accgattgat attaatgaac
     4201 acacccatcc ccttctccga acggctcatc cgctggcaaa aacaacacgg tcgccaccac
     4261 ctcccttggc aggtcaaaaa cccttattgc gtctggcttt ccgaaatcat gctccagcaa
     4321 acgcaggtcg ccaccgtgtt ggactactat ccgcgtttct tggaaaaatt cccgaccgta
     4381 caagcacttg ccgccgcgcc gcaagacgaa gtgttatcgc tgtgggcggg cttgggttat
     4441 tacagccgcg cgcgcaacct gcacaaagcc gcgcaacaag tcgtcgaaca attcggcggc
     4501 acgtttccgt cggagcgcaa agacttggaa accctctgcg gcgtaggcag aagcaccgcc
     4561 gccgccattt ctgccttctc cttcaaccgc cgcgaaacca ttttggacgg caacgtcaaa
     4621 cgcgtactct gccgcgtgtt cgcccgcgac ggcaatccgc aggacaaaaa atttgaaaac
     4681 tcgctctgga cacttgccga aagcctgctg ccgtctgaaa acgccgatat gcctgcctat
     4741 acacaaggtt tgatggattt gggcgcgacc gtgtgcaaac ggacgaaacc cttgtgccac
     4801 caatgcccga tggcggacat ctgcgaagca aaaaagcaaa accgcaccgc cgagctgccg
     4861 cgcaaaaaaa ccgccgccga agtaccgacc ctgccgcttt actggctgat tgtccgcaac
     4921 cgggacggcg cgattttgct ggaaaaacgc cccgccaaag gcatttgggg cgggctgtat
     4981 tgcgtgccgt gttttgaaag tttgaacggg ctttccgact ttgccgccaa attctccctg
     5041 accatggcag atatggacga acaaaccgcc ctgacccacc gtctgacgca ccggctgctg
     5101 atgattacgc cgtttgaagg acaaatgccg tctgaaagcc cttcagacgg catttggata
     5161 aagccggcgc atttgaaaga ttacggtttg cccaagcctt tggaaattta tttaaacggt
     5221 aataggttag aataaacaaa ataaacccat tgaactgttg tttgcaggta tcgcagcaag
     5281 aacaaccgat gaatttgggt cgtattttag gcggcgggat aatgttcaaa tgggacattt
     5341 ggaacggaag aagtcggcaa tttaaaaagg atttaaaaag caaagaaggt caaaaacatg
     5401 aacacaaact taaatgacaa agacaaagcc atggataccg caatcaggtt tcagaaaagg
     5461 atgaggattc cgaaattttt ctttttaatt ctcggaatca caatggtttt ggcatttatc
     5521 caagacgtga taacgggttc taattttctg caaataacaa ttaatgtaaa attttcgtaa
     5581 aaatttatcg gcttttaaaa caaaattgac taaaatagtc gcgagttttt actgcaataa
     5641 aggagattgc aatgaatatg aaaaccttat tagcactagc ggttagtgca gtatgttcag
     5701 ttagtgttgc gcaagcacac gagcataata cgatacctaa aggtgcttct attgaagtga
     5761 aagtgcaaca acttgatcca gtaaacggta acaaagatgt gggtacagtg actattactg
     5821 aatctaacta tggtcttgtg tttacccctg atttacaagg attaagcgaa ggcttacatg
     5881 gtttccacat ccatgaaaac ccaagctgtg agccaaaaga aaaagaaggt aaattgacag
     5941 ctggtttagg cgcaggcggt cactgggatc ctaaaggtgc aaaacaacat ggttacccat
     6001 ggcaagatga tgcacactta ggtgatttac ctgcattaac tgtattgcat gatggcacag
     6061 caacaaatcc tgttttagca ccacgtctta aacatttaga tgatgttcgc ggtcactcta
     6121 ttatgatcca cacgggtggt gataatcact ccgatcatcc agctccactt ggcggtggcg
     6181 gcccacgtat ggcatgtggc gtgattaaat aattcgattg ttcgaaacga aaagtgcggt
     6241 gaattttgac cgcacttttt tgctagatat ttag
//
LOCUS       DAXHRP010000120         6249 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.120, whole genome shotgun sequence.
ACCESSION   DAXHRP010000120 DAXHRP010000000
VERSION     DAXHRP010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.120"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..131)
                     /locus_tag="ACFM72_001633"
     CDS             complement(<1..131)
                     /locus_tag="ACFM72_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HFC6258178.1"
                     /translation="MLKTLTFAALHFSTAFSVTYVLTGSIGISGAVALVEPLINTVV"
     gene            253..1206
                     /locus_tag="ACFM72_001634"
     CDS             253..1206
                     /locus_tag="ACFM72_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HFC6258179.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGADETAERVRD
                     AHIVITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHASAVREGYVSFEDAVRAADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1281..3338)
                     /gene="metG"
                     /locus_tag="ACFM72_001635"
     CDS             complement(1281..3338)
                     /gene="metG"
                     /locus_tag="ACFM72_001635"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HFC6258180.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECH
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVADSALLAKLTAQSEAIAECYESREYAKALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPKVAEN
                     AAKFLNLEAITWANTRETLGKHAINKYEHLMQRVEQKQVDDLIEANKQSIAAAAVPAA
                     EEGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     AFYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(3454..5292)
                     /gene="glmS"
                     /locus_tag="ACFM72_001636"
     CDS             complement(3454..5292)
                     /gene="glmS"
                     /locus_tag="ACFM72_001636"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HFC6258181.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGKLFVFADLDSNFNATEGVHVI
                     RAPRHVGELSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            5398..5523
                     /locus_tag="ACFM72_001637"
     CDS             5398..5523
                     /locus_tag="ACFM72_001637"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258182.1"
                     /translation="MPSEGLGLLKKRRDFPVYPGWAFRRHYLLLVYSFCKSTLTS"
     gene            5574..6095
                     /locus_tag="ACFM72_001638"
     CDS             5574..6095
                     /locus_tag="ACFM72_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258183.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKIHVVTGKEESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYRDARNALPSNQTYQQHLAAIEQLKRRFEAEFDELEK
                     EIKCNGRSPALLL"
BASE COUNT         1329 a         1471 c         1894 g         1555 t
ORIGIN      
        1 aaaacgacgg tgttgattag gggttcgacc agcgcgaccg ccccggatat gcctatactg
       61 cccgtcagta cataggttac actgaaggcg gtgctgaaat gcagtgcggc aaaagtcagg
      121 gttttaagca tcatcctctc ccgaattgga cattgacgga ggaatgataa aggttatcat
      181 aaggttgcgc ggtttaaatt tgctatttat tgttagcgta aataaatcat tttccaaata
      241 aggatagaaa ttatgaatca taaaaagatc gttgttttgg atgcggatac tttgcccggt
      301 cgggtctttc attttgattt tccgcacgag cttgcggttt acggtacgac aggtgcggat
      361 gaaacggcgg aacgggtgcg cgacgcacat attgtcatta ccaacaaagt gatgatttct
      421 gccgatatta ttgcggctaa tccgcagttg gagctgattg ccgtcagtgc gaccggtgtg
      481 aacaatgtcg atattggggc ggcgaaggcg gcgggcgttg cggtatgcaa tgtccgcgcc
      541 tacggaaacg aatcggttgc ggaacacgcc tttatgctga tgattgcgtt gatgcggaat
      601 ttgcccgcct atcagcgtga tgttgcggca ggattatggg aaaagtcgcc gtttttctgc
      661 cattacggtg cgccgattcg ggatttgaac ggcaaaacgc tggcggtttt cggacgcggc
      721 aatatcggac ggacgcttgc cggatacgcg caggcattcg gtatgggggt ggtgtttgcc
      781 gaacacaaac acgcgtccgc tgtgcgtgaa ggctatgttt cctttgaaga tgcggtacgg
      841 gctgctgatg tgttgtcgct gcactgtccg ctaaacgccc aaactgaaaa tatgataggc
      901 gaaaacgaat tgcggcagat gaagcctggc gcggttttaa tcaattgtgg gcgcggcggg
      961 ctggtggatg aaaacgcgct gcttgccgca ctcaaatacg ggcagatcgg cggggctggt
     1021 gtcgatgttt tgacggagga gccgccaagg ggcggcaatc ccctgctgaa tgcacgactt
     1081 cccaatctga ttgttacgcc gcataccgcg tgggcgagcc gcgaggcttt ggacaggctg
     1141 ttcgatatat tgttggcgaa cattcacgcc tttgtgaaag gcgaggcgca aaaccgggta
     1201 gtttgagctt gtcgggataa cgaaaaacaa tgccgtctga acgcccaaag ggttcagacg
     1261 gcattttttg agatttctac ttaaccgact ttgtcgcccg gttgcgcgcc tgcatccaca
     1321 tccaagagct tcagtttccc gtctgccgtg gcggcactca aaatcatgcc ttcggatacg
     1381 ccgaattttg ccattttgcg cggggcgaag ttggcgacgg cgatgaccat tcttccgttt
     1441 aactcggcag ggttggggta aaacgcggcg atgccggaga agatgatacg tttttcaaaa
     1501 ccgaaatcga ggtcgaattt taagagtttg gtgctgcctt cgacggcttc gcagttcaat
     1561 actttggcga cgcgcatgtc gattttcata aagtcgtcga aactcgcctg ttcggcaact
     1621 ttttcgtatt tgccctcttc ggcggcaggc acggctgcgg cggcgatgct ttgtttgttg
     1681 gcttcgatta aatcgtccac ttgtttttgc tccactcgtt gcattaaatg ttcgtatttg
     1741 ttgatggcgt gtttgcccaa ggtttcgcgt gtatttgccc aagtgatggc ttccaaattc
     1801 aggaatttgg cggcattttc ggccactttc ggcaacacgg gggcgaggta ggcggtcagc
     1861 atggtaaagg cgttgatgag ttcgctgcat acttcgtgca ggcgttcgtc ttggccttct
     1921 tgtttggcga gttcccaagg tttgttggca tcaacgtatt cgttgacaat gtctgccaag
     1981 gccatgatgt cgcgcagggc tttggcgtat tcgcggcttt cgtagcattc ggcaatggct
     2041 tcgctttgtg cggtcagttt tgccaataat gcgctgtcgg cgacgtcttt caaacggcct
     2101 tcaaagcgtt tggcaatgaa acctgacgcg cgggcggcga tgttgacgta tttgccgacg
     2161 aggtcgctgt tgacgcgcga gataaagtct tgcaggttca aatcgatgtc ttcgattttg
     2221 ctgttgagtt tggcggcgat gtagtagcgc atccactcgg ggtttaggcc ttgttccaga
     2281 taggattttg cggtgatgaa ggtgccgcgc gatttggaca ttttttgtcc gtcgacggtc
     2341 aaaaagccgt gtgcgtacac gccggtcggg gcgcggtggc cggagaaatg cagcatagcg
     2401 ggccagaaca gggcgtggaa atagaggatg tctttgccga tgaagtggta catctcggtt
     2461 tggctgccgg ctttgaagta ttcgtcaaaa tcgatgccga tgcggtcgca caggttttta
     2521 aacgatgcca tgtagccgac gggcgcgtcc agccagacgt agaagtattt gcccggcgcg
     2581 tcggggattt caaaaccgaa atacggcgcg tcgcgggaaa tgtcccagtc ggacagggtg
     2641 gtttcttcgc cttcgcccag ccattctttc attttgttga gggcttcggg ttgcagatgg
     2701 ggcttgccgt cgtgcggatt gttgccggaa gtccatgctt tgaggaagtc ggcgcattcg
     2761 tccagtttga agaagaagtg ttcggattcg cgcaattcgg gtttggcacc ggaaacggcg
     2821 gaatacggat taatcagttc ggtcggggaa taggtcgtgc cgcagacttc gcagttgtcg
     2881 ccgtattggt cttgggcgtg gcatttcggg cattcgcctt tgacgaagcg gtcgggcagg
     2941 aacatttgtt tttcggggtc gaaaagctgc tcgatgacgc ggctctcaat cttgccgttg
     3001 gctttcagcg cgcggtaaat gtcttgggaa aactgtttgt tttcagggga atgggtgctg
     3061 taataattgt cgtaaccgat gaaaaagcca gtaaagtcgg cgaggtgctc ttcgcgcact
     3121 ttggcaatca tgtcttcggg ggcgatacct tgtttttgcg cggcaagcat cacgggcgtg
     3181 ccgtgggtgt cgtcggcgca gcagtagtgg cattcgttgc cgcgcagttt ttggaagcgt
     3241 acccaaacgt cggtttggat gtgttcgacc atgtggccga ggtggatgct gccgttggca
     3301 tagggcaggg cggaggtaac taagattttg cgtgtcatat tgtgctttgc aaacaaaggg
     3361 taaaggcgga ttataccgca aatcaaacgg ggaaatgccg tctgaagcct gaaaaatcgg
     3421 gcttcagacg gcatttttgc caaccggcgg tatttattcg acggttacgg atttcgccag
     3481 gttgcgcggc ttgtctacat ccgtgccgcg cgcgagggcg gtgtggtagg cgaggagctg
     3541 cacggggatg gtatgcacga cgggggacag ttcgccgaca tggcgcggcg cacggataac
     3601 gtgcacgcct tcggtggcat taaaattgct gtcgaggtcg gcaaagacga aaagtttgcc
     3661 gccgcgcgcg ccgacttcct gcatattggc tttgactttg tccaataggc tgtcgttggg
     3721 cgcgatgacg acgacgggca tgttttcgtc cactaaggca agcggcccgt gcttcagttc
     3781 gccggcagga taggcttcgg cgtggatgta ggtgatttcc ttcagcttta acgcaccttc
     3841 gagggcaatc gggtaatgga tgccgcgccc taaaaacagc gcgctggttt tcttggcaaa
     3901 ctgttgcgcc caagcggcaa tttgcggttc gaggttcaaa gcgtgctgca cgctgccggg
     3961 aagctggcgg agttcttcgg tgtaacgtgc ttcgtcttct tcggaaacca aaccgcgcac
     4021 tttcgccagc gttaccgcca aaccgaacag cgcaaccagc tgcgtggtaa atgctttggt
     4081 tgaggcgacg ccgatttccg caccggcacg ggtataaagc acgaggctgc tttcgcgcgg
     4141 cagggcggat tccatcacgt tgcagatgga gaggctgtgg cggtgtccca aagatttggc
     4201 gtatttcaac gcctccatcg tgtccagcgt ttcgccggat tgggaaatgg taatgaccag
     4261 ttggtccgga tcggcaatca cgctgcggta tcggtattcg ctggcgattt cgacatcggc
     4321 cgggattttg gcgatggatt ccaaccaata tttggcggtc agcgcggcgt aataggacgt
     4381 gccgcaggca aggattttga cgctgcggat gctttcaaac acgcttttgg cgtttttgcc
     4441 gaagttttcg gggatgaagc cgccgtcgag gaaaacctcc gccgtgtctg caatcgcgcg
     4501 cggctgctca tggatttcct tttgcataaa gtggctgtac ggtcccagtt ccaaagaggc
     4561 gagcgagagt tcggatacct tgactttgcg ttcggcaggc aggccgtttt tatcggtcag
     4621 ccttttgatg ccgtctgaag ccagcagcgc gatgtcgccg tcttcgaggt acgccacgcg
     4681 gcgcgtaaag gcgatgacgg cggatacgtc cgaagcgata aaggtttcat cgtcgcccaa
     4741 agcgaccaaa agcgggcagc ccatacgcgc cacaactaat tcatcaggct tgtcttgggc
     4801 aataaccgcg atggcgtatg cgccgtggaa acgtttgacc gcttcttgta ccgcttcaaa
     4861 cagcctgccg ccgttttgcg cgtattcgtg attgatgctg tgtgcgatga cttcggtatc
     4921 cgtttgcgat tcaaaacggt atcccaaacc ttccaaacgt ttgcgttcgc tttcaaagtt
     4981 ttcgatgatg ccgttgtgta cgaccgcaat cataccgccg ctgatgtgcg ggtgggcgtt
     5041 cggctcagta acgccgccgt gtgtcgccca acgcgtatgt ccgatgccga tgccgccgct
     5101 gatgcctttt tcgcgtgccg cgtcctccat aagctgcacg cgtccgacgc ggcgcacacg
     5161 tttgattttg ccgtcggtgt tgacggcaat gcctgatgag tcataacccc ggtattcgag
     5221 gcgtttgaga ccgtcggtca gaaaatcgac gacgttgtga tgggcgcgga tggcgccgac
     5281 gataccgcac ataactgttc cttagtatcc ggttgaaaaa aaacaggcgc ggacggcttc
     5341 cgtgccgcac cttcctcttc ggattataaa ccgcctcccg cgccggaaaa cagcaaaatg
     5401 ccgtctgaag gcttgggctt gctcaaaaaa aggagggatt tccctgttta tccaggatgg
     5461 gcgttcagac ggcattacct gctgctggtt tatagttttt gcaaatcaac attgacaagc
     5521 tgaaaaaaaa aaacaatata ctcgctcggt cttaatgtta acggagtatg gaaatgaaac
     5581 aaatgctttt agccgtcggc gtggtggcgg tgttggcggg ctgcggcaag gatgccggcg
     5641 gttacgaggg ttattggcgc gaaaagtcgg acaaaaaaga gggtatgatt gccgtcaaaa
     5701 aagaaaaagg caattacttc cttaataaaa tccacgtggt tacaggcaag gaagagtcct
     5761 tgcttttgtc tgaaaaagac ggcgcgcttt cgataaacac agggataggg gaaatcccga
     5821 tcaaactttc cgacgacggg aaagagctgt atgtcgaacg taggcagtat gtcaaaaccg
     5881 atgcggcgat gaaggacaaa atcatcgccc atcagaaaaa gtgcggacaa acagcacagg
     5941 cataccgcga cgcgcgaaat gcgttgccgt caaaccagac gtatcagcag catctggcgg
     6001 cgatcgagca attgaaacgg cggtttgaag ccgagtttga cgaattggaa aaagaaatca
     6061 aatgcaacgg cagaagcccg gcattgttgc tttagtaggg gacaaccggg aggatgccgc
     6121 cgtccgaatc ggatgtgcgg tttctgtacc ggtacgggcg ggcaggaatg tccgcctttt
     6181 ttgttcggat gcgtttgaat acccgtttga ttccgaccgt ttgcaagggg tatttccgtt
     6241 cgggcggaa
//
LOCUS       DAXHRP010000121         6217 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.121, whole genome shotgun sequence.
ACCESSION   DAXHRP010000121 DAXHRP010000000
VERSION     DAXHRP010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6217
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.121"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..314
                     /locus_tag="ACFM72_001639"
     CDS             <1..314
                     /locus_tag="ACFM72_001639"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258184.1"
                     /translation="YTEDDSKPAGKKRPLLNCIPKVGHLTDFRGCSFLWQNIQMNSDL
                     PSFNTIWQGTADHLSISDSLVRRWVTKYRLHGESGIKRRKHTTKYSVEYKLEAIRLVA
                     G"
     gene            318..431
                     /locus_tag="ACFM72_001640"
     CDS             318..431
                     /locus_tag="ACFM72_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC6258185.1"
                     /translation="MSQKAAADQLNLPDCSILLQWLRLYHLNGINGLKPKP"
     gene            751..1008
                     /locus_tag="ACFM72_001641"
                     /pseudo
     CDS             751..1008
                     /locus_tag="ACFM72_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611698.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1061..1243)
                     /locus_tag="ACFM72_001642"
     CDS             complement(1061..1243)
                     /locus_tag="ACFM72_001642"
                     /inference="COORDINATES: protein motif:HMM:NF024728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HFC6258186.1"
                     /translation="MKYTIFFSTSHHSNQTKATHRHTHVGSTAGQTTIRSGGDTTLKG
                     AQLIGIGIQADPQLQP"
     gene            complement(1394..2344)
                     /locus_tag="ACFM72_001643"
     CDS             complement(1394..2344)
                     /locus_tag="ACFM72_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFC6258187.1"
                     /translation="MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSH
                     KVNDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKL
                     IAQYCQDRKHKLKAWKPPTKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQ
                     TTISNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFK
                     NARQFTAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVG
                     RLKNKGKHIKLILIAIMRKLAVIAFTILQNGQDFQVERYK"
     gene            complement(2970..4055)
                     /locus_tag="ACFM72_001644"
     CDS             complement(2970..4055)
                     /locus_tag="ACFM72_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HFC6258188.1"
                     /translation="MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLY
                     FCHIDGLDKRQFKAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVPPY
                     IQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLD
                     NPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAVWALIAIVGFVGWKSYGIF
                     KVYSKATDSRIEQEAQKESVVQTMTEQPASSEEMPLKNSDNLKPEDFVPTLPEKPESK
                     PIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYK
                     DEQQRTEQVEQSAKADKPQVLVMGGKP"
     gene            complement(4065..4355)
                     /locus_tag="ACFM72_001645"
     CDS             complement(4065..4355)
                     /locus_tag="ACFM72_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC6258189.1"
                     /translation="MPLLAGLIPLLGILLKMLIVRIILATGLTFVTYAGYLIALEKFK
                     DYTSNAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG"
     gene            complement(4356..5861)
                     /locus_tag="ACFM72_001646"
     CDS             complement(4356..5861)
                     /locus_tag="ACFM72_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC6258190.1"
                     /translation="MYALSEKYNDNGFKAYKVLGEGGGIHTEYNYKFDKSLNLNVLES
                     STGARSLEKVPVKVTASVSRAAVLSGVGKLARLGAKLSTRAVPYVGTALLAHDVYETF
                     KEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDKRRINRTYGCYGVDSSIMRLMSDDSR
                     FPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRCTFNWNGGDCLVNKGD
                     DFRNGADFSLIRNSKYKEEMDAKKLEEILSLKVDANPDKYIKATGYPGYSEKVEVAPG
                     TKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEV
                     SPAENPANNPNPNENPGTSPNPEPDPDLNPDANPDTDGQPGTRPDSPAVPDRPNGRHR
                     KERKEGEDGGLLCDYFPEILACQEMGKPSDGMFHDISIPQVIDDKTWSSHNFLPSNGV
                     CPQPKTFHVFGRQYQASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLKGK"
     gene            complement(5902..6192)
                     /locus_tag="ACFM72_001647"
     CDS             complement(5902..6192)
                     /locus_tag="ACFM72_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258191.1"
                     /translation="MNKNERDFFYISNSDLDKLSESYPDRPLSYVFYCYLKETGLLKN
                     FSMDKCHNFFNRINFNESCFEIKFKDDSFFIIGNGKIDVSDSNNFFSVSFEC"
BASE COUNT         1572 a         1348 c         1339 g         1958 t
ORIGIN      
        1 tatacacgga ggatgattca aaaccggcag gcaaaaaaag accgcttctg aactgcatcc
       61 caaaagttgg acaccttacc gactttaggg ggtgcagttt tttatggcaa aatattcaga
      121 tgaattccga cttgccgtcg ttcaatacta tttggcaggg aacagcagac catctttcta
      181 tttccgattc attggtacgc agatgggtga caaaatacag attacacgga gagagtggca
      241 tcaaacgtag aaagcatacg acaaaatatt cggtcgaata caaacttgag gcaatccgcc
      301 tggtggcggg gtagggaatg tcccaaaaag ctgccgcaga ccaactgaat ttgcccgact
      361 gctccatctt gctgcaatgg ttgcgcctct accatttgaa tggtattaac ggtttaaagc
      421 ccaaacccta aacccaaagg aagaaagccc gtgaaaaaac agcatccgcc ggaaacgaaa
      481 aagccgacta tctgaaaacc aaggaagaac tgcttgcgga attggcttgc cttaaagcgg
      541 aaatggctgc cctaaaaaag ctcgatgcct taatctatgg gaaagaagtg cggtagaaag
      601 aacgcaactc gtcgcagggt taaggcaatg ccatccgttg aactgctgtt ggtgattgtc
      661 ggactgccac gcggcacctt ctattaccaa ttggttgtcc aatcggcaga agacaaatat
      721 gccgatttga aacggcatat ccatgatatt tatcaaaagc agttgaaaga caacggtctg
      781 gttcagagta tgtcccgcaa gggaaactgc ttggacaatg cggcaatgga aagtttcttc
      841 ggaacgttga aatcggaatg tttccatacg tgcaaatatg attccgttac cgaattggaa
      901 gctgtactgc acgaatatat ccgttactac aacaacgata gaatcaagtt gaaattaaaa
      961 ggactgagcc ctgttcagta cagaattcag tccctgaaag ccgcttgatt aaactgtcca
     1021 acttttgggg gtcagttaat atcggttcca ccaatagtcg tcagggttgt agttgggggt
     1081 ctgcctgtat gcctatgccg ataagctgag cacctttgag ggtggtatcc ccgccgcttc
     1141 ggatggtggt ttgtccggcc gtactgccga catgggtgtg gcggtgggtt gcttttgtct
     1201 gattgctgtg gtggcttgtt gaaaaaaaga tagtgtattt cacggtcaaa taactttaca
     1261 tttcttgaag ttgcaagaat gcgcaccccg actttttcgg gatgtttgtt tcgttttgaa
     1321 tggatttgat gttttaattt atactttatt ttcaataaat tgaaaatcac cggcgaaagc
     1381 ccagtttaat tttttattta tatctttcca cttggaaatc ttggccgttt tgcaaaatcg
     1441 taaacgctat taccgccagt ttccgcatga tggcaattaa tatcaatttt atatgcttcc
     1501 ctttattttt cagacgccct acaaattcag ggaaggcatt acaacgatat gcaacaagtg
     1561 caggcatata aaggcttttc cttatttccg aacttcctat ttttgatatt ctgctttttc
     1621 cgttcacgct tgttcctgat tgaaattttc tagggtctag gcctagataa gccgtgaact
     1681 gtcttgcatt tttaaattca tgtcttttat aggttgatag caatactgct gtcgcttgct
     1741 cgcctatgcc tgttattgtt ttcagccttt tgcgtagatt gttataactt ggattgtctt
     1801 tgtagaactg gagtaattgc tttttgacta tctgtatttg tgctgtcagg tttgaaatag
     1861 ttgtttgaat atgggatttg atatagtcgg gtgcttcgtg ttgtttagct ttttctgttg
     1921 cgcgttgctg tttcagatag tctaaatatc gggcgatttc ctgtaattgc ttctgttctt
     1981 ttgtcggcgg tttccatgct tttaatttgt gctttcggtc ttggcaatat tgggctatca
     2041 actttgcgtc ttgtgtatct gtttttgatc gttgtagttc tgctatcgca tatcctttta
     2101 tctttcgtgg attctctacg gtaattgtat atcttgaata aagatattcg gctaatgctt
     2161 cgtaatatgt gcctgttgct tcgcacacgc aatggagctt atcgtttact ttatgacttt
     2221 gtagccaatt tattaattgt tcaaatcctc ctttgttgtt ctgaaacttc ttttgataat
     2281 tttgaccgtc tacaatcaaa cagcaatcta ttgtgagctt tgaaacgtct attcctaagt
     2341 acatggttta accttattaa ttcgggcttt ttgccctaga tagtgttcaa acttaagatg
     2401 tacgaaagcc cacgcttcta tctttcttac aagctgtacg ctttggccgt actttcgaag
     2461 tcgtgggctt tacttggtgt ttcgtcaaac gccaagccct caatgggctg atttactcat
     2521 tcagggcttg aagcttatcg cctttgccgt atctgatttt attggggtcg caggttttgg
     2581 taaaggtttc tgttgcgacc cgaatgtctg attttttttg ggcgtatctc agtctggaat
     2641 cactccgttc gggggtttcc ggtattgaaa aacagttcat aaaaaaggaa aagggggtat
     2701 tcataaagat tgggtaaaaa gcgcgcccaa tctttacaaa gcttccccct tttccttttt
     2761 tctgccctat tttcctgcac ctacaacccc cgaacgaagc gattccagac tgagacactt
     2821 taaaaaaaac agtcattcta gcaattaacc cccttcactc agctcaagcc atcctgaggg
     2881 gtagggattg aactttctgc tttacgactc cgccgccaat tccttcaaac ggttttccgc
     2941 gctcttcagt tgtcgtacat gagattttgc tacggctttc cgcccattac gagaacttgc
     3001 ggcttgtccg ctttcgcgga ctgttccacc tgttccgtcc tttgctgttc gtccttataa
     3061 ggattgaaag gcaacccgtt tttcacatat tctttacaca ttatctttgt tatttctttc
     3121 aagggtgttc cttgatttga atagcatgtg caatctgatt ttccgccgtc tatacatccg
     3181 gcgatttgct caaaggtttt tacttgtcgg actgtgttat aaataggctt gctttcgggc
     3241 ttttcgggta aagtcggcac aaagtcttca ggtttcaaat tgtctgaatt ttttaaaggc
     3301 atttcctctg atgatgcagg ctgctccgtc atcgtctgca caacgctttc tttttgcgct
     3361 tcctgctcaa tccggctgtc tgtggctttg ctgtaaactt taaaaatgcc gtaacttttc
     3421 cagcctacaa accctacaat cgcaatcaac gcccaaaccg cccaaggtac ttttttcttg
     3481 aacttttggt gctggcttgc tgatttatag tatttaaagg cttctttcgg cggtttccaa
     3541 cttgcgactt ctacgccgct tacgcctgcg ggattgtcca acgaggttac gcatttatac
     3601 caataatact gtttcattcc gattgccttg cgttcaaggt gtacatgctt tgaaacaagg
     3661 ttgcggacga atatatcaag ttggctcggg tgctgcgtca tcaaaataac ggtatgcccg
     3721 tgatggcgga gttctgtcag ttcctgaata taaggcggaa cgggacggcc tgccgcgcgt
     3781 accggataag tgtagtgcgc ttcgtcaaca atcagcactg cgccttccgg tatgacatca
     3841 cgaagcgggg cggacatgat ttgctcttcc gtcagttcgt gggctttaaa ctgccgttta
     3901 tccaatccgt cgatatggca gaaataaagc ggtctgtcta cctctgtgcc gtcttccaat
     3961 ttcattttga acaatccgtc ttcgttgttc aaaatcatag agacgacgcg ggaggttttg
     4021 cctgtcccca tgtttcctgt aaacagataa atcatgcttc tacctcatcc tggaaagaca
     4081 aacgtcagtt ttttgaatgc gtgcatacca atgaagaacg agaatgcgcc gaacaggtag
     4141 cccaacccct gaccgaatcc cgaaattaaa agaaggttca gtatgtcgga aggcatggaa
     4201 ttgatcgcat ttgacgtgta gtctttgaac ttttccagcg cgatgagata cccggcatag
     4261 gttacaaatg tcagacctgt tgcaaggatt attctgacaa tcagcatttt cagaagtatg
     4321 cctaaaagtg gaatcagacc ggcaagtaat ggcatttatt tccccttcaa cgaaccgaaa
     4381 acgacaaaag ccgacataat gataaaggcg agcagtacgg caaaacggat tttttcggca
     4441 aacacgcata acggctcata gcttgcctga tattgcctac cgaaaacatg aaaggttttc
     4501 ggctgcggac atacgccgtt agacggtaaa aagttatgtg aagaccatgt tttatcgtct
     4561 ataacctgcg gtatgcttat atcgtgaaac atgccgtctg aaggtttgcc catctcctga
     4621 caggctagga tttccggaaa ataatcgcac aaaagcccgc cgtcttcgcc ttctttcctt
     4681 tctttgcgat gcctaccgtt tgggcggtcc ggaacggcgg gggaatcggg tcttgtgccg
     4741 ggctgtccgt ccgtatcggg atttgcatcg ggattcaaat cggggtcggg ttcgggattg
     4801 gggctcgtgc cggggttctc attggggttc gggttgtttg cggggttttc ggcgggcgat
     4861 acttcgggca gcggctgtgc gttcggtgct tccgcgcttc cgggggtcaa gtcgggacgc
     4921 gggattactt gaacatccac cgtggtgttg ccttgcgaat ccctgccgaa tgttgcgaca
     4981 acctgaacgg gattcccgtt cctgtccgtg acgggaccca tattcacttt tgttccgggt
     5041 gcgacttcta ctttttcgga ataaccggga taaccggttg cctttatgta tttgtcggga
     5101 ttggcatcga ctttcaacga taaaatctct tccagctttt tggcatccat ttcttctttg
     5161 tattttgaat tgcgaataag ggaaaaatca gccccatttc tgaaatcatc acctttattg
     5221 accaaacaat ctccgccatt ccaattaaat gtgcaacgat ttaaaacaaa attattccaa
     5281 tccaaagaac ttaatttatt cagttcttct ttatgccaat tccaaaacgg acgtgccagc
     5341 ctatacattt ggctttccat caattctttg acttcgggga atctgctgtc atcggacata
     5401 aggcgcataa tcgaactgtc aacgccgtag cagccatagg ttctattaat acgtcttttg
     5461 tcttcgtacc aaaggcaatt actatattcg tagcctttta caaatttgtc ggtttcgggg
     5521 tcgtattggt agccttgtgc ctgtatgtct tctttgaaag tttcgtatac gtcatgggct
     5581 aaaagggctg ttccgacata aggaactgcc cttgtgctta atttcgcgcc taagcgggca
     5641 agtttgccga ctcctgacaa gacggcggcg cgggaaactg atgcagttac tttaacgggg
     5701 actttttcaa gagagcgtgc gcctgttgaa ctttctaata cattcaaatt caaactttta
     5761 tcaaatttgt aattatattc tgtatgaatt cctcctccct cacctaaaac tttgtatgcc
     5821 ttaaatccat tatcgttata tttttccgaa agtgcataca tcaatttccc atttttaatt
     5881 tctaaatctg ctgaaaaaga tttagcactc aaaagaaaca gaaaagaaat tattagaatc
     5941 cgaaacatca atttttccat tgccaataat gaaaaatgaa tcatccttga atttaatttc
     6001 aaagcaagat tcattaaaat taattctatt aaaaaaatta tgacatttat ccattgagaa
     6061 atttttcaat agaccagttt ctttcaaata acaataaaac acataagaaa gaggcctatc
     6121 aggataagat tctgacaatt tatctaaatc agaatttgat atatagaaaa agtcacgttc
     6181 atttttattc atggtttcaa gcctcaaatg tctaatt
//
LOCUS       DAXHRP010000122         6147 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.122, whole genome shotgun sequence.
ACCESSION   DAXHRP010000122 DAXHRP010000000
VERSION     DAXHRP010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6147
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.122"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            142..1539
                     /gene="aspA"
                     /locus_tag="ACFM72_001648"
     CDS             142..1539
                     /gene="aspA"
                     /locus_tag="ACFM72_001648"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HFC6258192.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGKLGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLAVLKNAFAAKAEAFKDVLKMGRTQLQDAVPMTTGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLAEKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1611..2486)
                     /locus_tag="ACFM72_001649"
     CDS             complement(1611..2486)
                     /locus_tag="ACFM72_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HFC6258193.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWWLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2488..3210)
                     /locus_tag="ACFM72_001650"
     CDS             complement(2488..3210)
                     /locus_tag="ACFM72_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HFC6258194.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPKAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="ACFM72_001651"
     CDS             complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="ACFM72_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HFC6258195.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPVQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3787..4149
                     /locus_tag="ACFM72_001652"
     CDS             3787..4149
                     /locus_tag="ACFM72_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC6258196.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            4184..5047
                     /locus_tag="ACFM72_001653"
     CDS             4184..5047
                     /locus_tag="ACFM72_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HFC6258197.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPSLAFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALTVIKFSAAQKTLTVPNGGIFKA
                     VHLFFKTENAE"
     gene            5140..6099
                     /gene="ttcA"
                     /locus_tag="ACFM72_001654"
     CDS             5140..6099
                     /gene="ttcA"
                     /locus_tag="ACFM72_001654"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HFC6258198.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQSLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGS"
BASE COUNT         1559 a         1782 c         1489 g         1317 t
ORIGIN      
        1 cccgaaaaca acgtttcccg ttttcagacg gcatacgata tggacaattt catccggccg
       61 gtatagtgtt cgtcctgcgg cggcatcttt ccgatggcgc attttttcaa tattaattat
      121 ccgacttaca aaggtaaaaa catgactgtc cgtatcgaac acgatttatt gggcgaccgc
      181 gagattcccg ccgaagtata ttggggcatc cacaccctgc gcgccattga aaactttaaa
      241 atttccacac aaaaaatttc tgacgtgccg cagtttgtcc gcagtatggt gatggtgaaa
      301 aaggcgacgg cacaggcaaa cggtaagttg ggcgcggtca agcccgaaat cgccgccgcc
      361 attgaaaagg cttgcgacga agttctgctg aacaaccgct gcctcgacca attcccgtcc
      421 gatgtgtatc agggcggtgc gggaacttcg gttaatatga acaccaacga agtcatcgcc
      481 aacctcgcat tggaagcctt gggatacgaa aaaggccgct acgacatcgt caatccgatg
      541 gatcacgtca atgccagcca atcgaccaac gatgcctatc ccacgggctt ccgccttgcc
      601 gtgtattaca gcatcggcga attgctcgac aaactggccg tcctgaaaaa cgcctttgcc
      661 gccaaagccg aagcgtttaa agacgttttg aaaatgggcc gcacccagct tcaagatgcc
      721 gtgccaatga ctacaggaca agaattccaa tctttccaag tgttgttgga agaggaaatc
      781 ctcaacctcg accgcacgcg ccaactgctt ttagaagtca atttgggcgc aacggcaatc
      841 ggcacgggcg tgaacacgcc caaaggctac gccgaactgg tggtcaaaaa actctccgaa
      901 gtcagcggct tgccttgcaa actgaccgaa aacctgattg aggcgacctc cgactgcggc
      961 gcatatgtga tggtacacgg cgcattgaag cgcacggcgg tcaaactctc caaaatctgc
     1021 aacgacttgc gcctgctctc ttccggcccg cgtgccggct tgaaagaaat caacctgccc
     1081 gaattacagg ccggttcttc cattatgcct gccaaagtca atcccgtgat tcccgaagtg
     1141 gtcaaccaag tctgcttcaa agtcatcggc aacgatacga cgattacctt cgccgccgaa
     1201 gccgggcaac tgcaattaaa cgtgatggag ccggtcatcg cccaatgtat gtttgaaacg
     1261 atttccctct tgggcaatgc tgcggtcaac ctcgccgaaa aatgcgtcaa aggcattacg
     1321 gtcaaccgcg aaatctgcga gcgttacgtt ttcaactcca tcggtttggt cacttatctg
     1381 aatccgtaca tcggccacca caacggcgac ttggtcggca aaatctgcgc ccagaccggc
     1441 aaaggcgtac gcgaggttgt tttggaacgc ggcctgttga gcgaagaaga actcaaccgc
     1501 atcctctctc ctgaaaacct gatgaacccc catctgtaac gttgcaggca aatgccgtct
     1561 gaagcaggga tgctgcttca gacggcattt tgttatatca atcagccgga ttatatgccg
     1621 aacagtacct tgacttcccc ccaataaaac aggcaggcga tagaacacag tgccaacacg
     1681 attcccgccg tattgattgt gttgattttt tccttaaaga acaatgcgcc cgaaagcgta
     1741 cccaaaacaa tcacgccgat attcataccg gcaaaaacca aggtcggatt atccttcatc
     1801 atttggtgcg cggtgatgta ggttacgata ttcataaaat tcaaaccgcc caagaatatg
     1861 ccgccaacca cactctcaac acgccatctg accgatttgg caaacaggca ggcaaacatc
     1921 agcacacccg ccagcacaaa tgcaaccagc aggttgcccg caaatgccgt tccgcttttg
     1981 gcaagctgtt tgaacaggat atcgataatg ccgtaacctg cccacacgcc cagcagcaat
     2041 gccgcctgcc gccacgcgct tcctgatttt ttgccaccgc tgtgtttcca aagcaggcag
     2101 aacagtgcgg caaatgcgag gcacagcccg attagtctgc cttcgctgag tttttcgcca
     2161 aacagcgtca aggcggcaac aatcggcaaa aacagcgaca aacgctgcgc cgcgtcggat
     2221 ttgacgatac cggcggattc tacggatttg cccataatga caaatacgga cggcagcagc
     2281 acgcccaatg cggcaaacag ccaccatgtc ggcaaaaatg cgccgatatt gccgacatcc
     2341 ggcttcaata ccagcagggt cagtatgacc gcgaccacat aattgacggc gaccgcctgc
     2401 gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga cacgctgaac
     2461 acgatgctga ttaacaggta agccatacta tatccatttc tcgggtgcaa ccgccctgcc
     2521 gccgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgt tcgttgcaat
     2581 aataatcagc acgccgatac ccaaaagggc agtcagcgca cccaaaatat aaagccaaaa
     2641 tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa tgctgtccaa
     2701 actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatatagg cgaaaatcac
     2761 gccgactatg ggcatgaaca gcatgattgc acccaaaccg aacaggatgt aggcggcgag
     2821 gacatagttg cgcccgcttc cgccgccgga cggttcgtaa gtatggcacg aacgtgatgc
     2881 ctgccgttca aacgcctgtc tgaacgcctg ttcgcggcgc atctgttcgc ggtaaaactg
     2941 ctccctgcgc gcctgttcgc ggcggaatgc ctcttcctgc cgcccgcgtt cctcatgccg
     3001 tctgaaggac gcgtcgtatt gcatccgttt cgacaggtcg gaaagcgtat cgtaagcccg
     3061 ttggatttct ttgaactttt cttccgcctt cggattgccc ggattgcggt cgggatgata
     3121 tttcatcgcc agcttgcggt aggcgcgttt gatttcgtcc gctcccgcct gcggcgacac
     3181 gcccaatacg gcatacaaat ctttgtccat attgttcctt tatactttcc cgtcaaaccg
     3241 ccgcctgtat tgttttcggg ttcaaaatat ttaaatctcc gggacggatg ccgataatga
     3301 acccgcgttt tccgccgttg atatagatgg tttccaaatc catcaccgac tgttcgacgt
     3361 aaatatccaa ctttgtccgg atgccgaacg gcgttgtgcc gccgaccaga tagcccgtcc
     3421 acttgtttgc ctgtacgggc gtggcgggtt caatgtgttt cgcacccaaa tgccgcgcca
     3481 gattgcgggt tgaaatctgc ttgtcgccgt gcatcaagac aatcagcccc ttaccgtttt
     3541 catcttgcaa aacaatggtt ttaatgacca agtgttcgtc tttgccgaat agtcgggcaa
     3601 actgcgccgt gccgccgtgt tcctcatagg cataggtaaa aggttcaaat tcgatgccgt
     3661 tttcacgcaa aacgcgcacg gcaggtgtta tcggataagt gtgtttactc atttttcgtc
     3721 atgcaaaaca tggaaatcgg tcaagcgcaa tgttaccata tatccccttt atcgaaggaa
     3781 accgatatgg atatccgata tttcggcaca acgccccgct attccgaagc cgtcggcgca
     3841 aacggcttga ttttcctctc cggcatggtt cccgaaaacg gtgaaacggc tgccgaacag
     3901 actgccgacg tgcttgccca aatcgaccgc tggctggcgg aatgcggctc ggacaaagcg
     3961 cacgttttgg atgcggtcat ctatctgcgc gatatgggcg actatgcgga aatgaacggc
     4021 gtgtgggacg cttgggttgc cgccggcaga acgcccgccc gcgcctgcgt ggaagcacgg
     4081 ctcgcccgtc cggagtggcg cgtcgaaatc aaaataaccg ccgtgaagag agacgcggca
     4141 actgcataaa cagatttcct ttatatttca gagtacgcaa atgatgaaaa ccttactgcc
     4201 ctttttcggc gtggtgcgcg tcagcggcga agaccgccaa accttcctgc acggacagct
     4261 ttccaacgac atcaaccacc ttcagaccgg gcaggcgtgt tatgcgactt acaacacgcc
     4321 caaaggccgt gtcatcgcca atatgattgt cgtcaaccga ggcggcgatt tgctgctgat
     4381 tatggcgcaa gacttgcttg aagcaacggt caaacgtttg cggatgtttg tgttacgcgc
     4441 caaagccgtt tttgaaatcc ttgaagatta cgccgtcggc gcggaattag aagcatccgc
     4501 cgaaccgctt gccgcgcaag aacccagcct cgcctttacc gccgaatgcg gttcagacgg
     4561 catctgttcc gtcgtcctgc cacatcgggg cattttgcac atcgccccca aaaacgcctt
     4621 gccgccttat gatgccgccg ccgaaaacgc gtggcggctg cacgaaatcc gtagcggtta
     4681 tccgtggata tgcgcggcta ccaaagaaac cgccgtcgcc caaatgctca accagcacat
     4741 catcggcggc gtacacttca aaaaaggctg ctatccggga caggaaatca ttgcccgtgc
     4801 ccagtatcgg gggcaggtca aacgcggctt ggcggtattg tcgggaaatt cggccgtcga
     4861 agcaggaacc ctgctgacgg cggacggcga agaggccggc atcgtactcg acagcgttca
     4921 agattcggaa aactttaccg cccttaccgt gattaaattc tccgccgcac aaaaaacact
     4981 gaccgtccca aacggcggta tcttcaaagc ggttcatctc ttctttaaaa ccgaaaatgc
     5041 agaataagcc gccgatgccg tctgaagccc ttcagacggc attgccgccc cgccaatcgg
     5101 ttacaatgcc gcctttctaa ttttcaaacc caaaccgcca tgtccaaaaa aaccaaacaa
     5161 gaactcgaaa acaacaaact cagcaaacgc ctgcgccacg ccgtcggcga cgcgattaac
     5221 gatttcaata tgatcgagcc ggacgacaaa atcatggtct gcctctccgg cggcaaagac
     5281 agctatgccc tgttagacat cctgcgccag ctccaagcca gcgcgccgat tgatttccaa
     5341 ctggttgccg tcaatctcga ccaaaagcag ccgggcttcc ccgaagaagt attgccgacc
     5401 tatctcgaaa gcatcggcgt tccctacaaa atcgttgaag aagacaccta ctccaccgtc
     5461 aaacgcgtat tagacgaagg caaaacgact tgttcgctgt gcagccgcct gcgccgcggc
     5521 atcctctacc gcactgcaaa agaattgggc tgcaccaaaa tcgccttggg acaccaccgc
     5581 gacgacatcc tcgccacctt gtttttaaat atgttttacg gcggcaaact caaagccatg
     5641 ccgcccaagc tggtgagcga caacggcgaa cacatcgtca tccgcccgct ggcgtatgtg
     5701 aaagaaaaag acttaatcaa atacgccgaa ttaaaacaat tccccatcat cccgtgcaac
     5761 ctctgcggct cgcaacccaa cctgcaacgc caagtcatcg gcgatatgct gcgcgattgg
     5821 gacaaacgct tccccggccg catcgaatcg atgttctccg ccctgcaaaa cgtcgtccct
     5881 tcccaccttg ccgataccga actcttcgac tttgtcggat tggaacgcgg tcaaagcctg
     5941 aaacacggcg gcgatttggc gtttgacagc gaaaaaatgc ccgaacgttt ttcagacggc
     6001 agcgaagaag acgagagcga aatcaaaatc gagccgcaaa aagccgaacg caaagtcatc
     6061 aatattctgg cgaacaagcc gaaaacctgc ggctcataga cctccgccgt caaaaatgcc
     6121 gtctgaagcc cgtttggcgt ttcagac
//
LOCUS       DAXHRP010000123         6118 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.123, whole genome shotgun sequence.
ACCESSION   DAXHRP010000123 DAXHRP010000000
VERSION     DAXHRP010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6118
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.123"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(152..2080)
                     /gene="dnaK"
                     /locus_tag="ACFM72_001655"
     CDS             complement(152..2080)
                     /gene="dnaK"
                     /locus_tag="ACFM72_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HFC6258199.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2288..2560)
                     /locus_tag="ACFM72_001656"
     CDS             complement(2288..2560)
                     /locus_tag="ACFM72_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258200.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVALSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2746..3432
                     /locus_tag="ACFM72_001657"
     CDS             2746..3432
                     /locus_tag="ACFM72_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6258201.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3564..3902
                     /gene="erpA"
                     /locus_tag="ACFM72_001658"
     CDS             3564..3902
                     /gene="erpA"
                     /locus_tag="ACFM72_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HFC6258202.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3919..4065
                     /locus_tag="ACFM72_001659"
     CDS             3919..4065
                     /locus_tag="ACFM72_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258203.1"
                     /translation="MPSERSDGIFTFRKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4062..4526
                     /locus_tag="ACFM72_001660"
     CDS             4062..4526
                     /locus_tag="ACFM72_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HFC6258204.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLKENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITRRYMELETVVPPEEGEGEGEG
                     ADGEMPEYLELHGGREDDISAPSQPEPPTRNIKPLVFGLLIAFLGYLLGKIF"
     gene            4561..6072
                     /gene="ubiB"
                     /locus_tag="ACFM72_001661"
     CDS             4561..6072
                     /gene="ubiB"
                     /locus_tag="ACFM72_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HFC6258205.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRCFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT         1383 a         1354 c         1631 g         1750 t
ORIGIN      
        1 aaaaatttcc agagaaccga tacaacagtt ggaacttggg tttgggaata ttacggtaga
       61 tgaacttgga acctctgtta tgctatggtc ttttatctca attgaaaaaa gcgcgaatca
      121 aacggttcgc gcttttttca gacggtatta attatttttt gtcgtctttt acttcttcaa
      181 agtcggcatc tacgacatca tcgtctttct ttgcagaagc attggcttgt tcgctttcgc
      241 ctgcttgggc ttcagcttgt gcttgagcgt aaaccatttc ccccagtttt tggctggctg
      301 cgcccagcgc ctcggttttg gcatcgatag cggctttgtc gtcgccttta actgcttctt
      361 cggcttcttt cagcgcggct tcgatttttt ctttctcggc tgcgtcgagt ttgtcgccgt
      421 agtcggccaa agattttttc acagagtgaa tcagggcttc agcttggttg cgggaagcga
      481 ccaattcagt cagtttttta tcttcctcgg cattggcttc ggcatctttc accatgcgtt
      541 cgatttcttc ttcgctcaaa cctgaagaac cttggatggt gatgttggct gctttgccag
      601 tgcctttgtc tttggcggaa acgtgcagga taccgttggc gtcaatatcg aaggtgactt
      661 cgatttgcgg cataccgcgc ggtgcgggtg cgatgtcgcc caagttgaac tgacccaaag
      721 atttgttggc agaagcgcgt tcgcgttcgc cttgcagtac gtggatggtt actgcgcttt
      781 ggttgtcttc ggcggtagag aacacttgcg acgctttagt cgggatagtt gtgttctttt
      841 gaatcagctt ggtcatcacg ccgcccatgg tttcgatacc caaggacaga ggggttacgt
      901 ccagcagcaa tacgtcgctg cggccgccgc ttaacacttc gccttgaatc gctgcgccta
      961 cggcgacagc ttcgtcaggg ttcacgtctt tgcgcggctc tttgccgaag aagtctttaa
     1021 cggcttcttg tactttcggc atacggcttt gaccaccgac caaaatcacg tcgtcgatgt
     1081 cgccagtgct cagaccggca tctttcaatg cggtgcggca aggctcgata gagcgggcaa
     1141 tcaggtcttc aaccaggctt tcgaatttgg cgcgggtaat tttcatcgcc aagtgtttcg
     1201 ggccggttgc gtccatggtg atgtacggca ggttgatttc ggtttgctgg ccgctggaca
     1261 attcgatttt ggctttttcg gcagcttctt tcagacgttg cagagccatg acgtcttgtt
     1321 tcaaatcaat gccttgttct tttttaaact cgtcaatgat gtagtcgatc aagcgttggt
     1381 cgaagtcttc accgcccaag aaagtatcgc cgttggtagc caatacttca aattgtttgt
     1441 cgccgtcgag gttggcgatt tcgatgatgg aaatatcgaa agtaccgccg cccaagtcat
     1501 atacggctac tttgcggtct ttgttgtcgc ctttgtccat accgaatgcc aaagcggctg
     1561 cggtcggctc gttgatgatg cgttttacgt ccaaaccggc gatacggcct gcgtctttgg
     1621 tggcttgacg ttggctgtcg ttgaagtagg ccgggacggt aatcacggct tcggttactt
     1681 tttcgcccaa gtaagcttcg gcggcttctt tcattttacg caggacttct gcggaaattt
     1741 gaggaggaga cagctctttg ccttgtgctt ttacccatgc gtcgccgttg ttggctttga
     1801 tgatttcgaa aggcatagat tcgatgtcgc gttggacttc tttgtcttca aatttgtggc
     1861 cgatcaaacg tttggcggcg taaatagtgt ttttggcgtt ggtcaccgct tggcgtttgg
     1921 caggcgcgcc gacgaggatt tcgccgccgt ccaaataagc gataacggac ggcgtggtgc
     1981 gtgcgccttc tgcgttttcg atcactttgg tttgaccgtt ttcggaaatg gccaaacaag
     2041 agttggttgt acctaagtcg ataccgatta cttttgccat gtggataatc ctatttgatt
     2101 ttgcttattt tgagaaatat gttggaacat tttgtcccga tgggctgtaa atagggcggg
     2161 cggcgggctg tttcaagcta cagcatggct ataagtatat aactttatga atatattggt
     2221 tttatatttg atttaataca tttggctcca atgcattcaa gcataatgtt tcaaatggca
     2281 ggcaggttta ttcatagacg atgccggcga gcatttcctg ttcgttcaag ttgccgtact
     2341 ctttttccca gtcgtgtgaa gactcgatga tgtcgcattc tttggaaagg gcgacttgtt
     2401 ctgcatccat atctttggcg ttcagtatgt tgaattgttc gcacagggat gcggataaag
     2461 tgatgtcagg ctgtttggct tcagaacggt tttcttggaa ggcaaagcag aatgcggtaa
     2521 atgccgcagc atagataaga tatttgccgg ttttcttcat tttctatcct ttttctgtca
     2581 attcaggatt aaacctatgg aaaatcttaa aaattatgta ttgagtaaga aaaatcataa
     2641 tttaaattta gtttatcata gttgttccgt ttttgggata gctaaggtaa aatatatttc
     2701 atgtttactt tagatgattg aatgaagggg agcggaagga tatttatgga aacctttaaa
     2761 gacagactgg tttttttatg gaaaagcgaa gcgaagcagg caaaaatcgc atccgatatt
     2821 gaaatgacga ttgcgggctt cagcaggata tggaatgaag gcggtttgcc gaagtctgaa
     2881 acattaaaaa aaatcaagca gttgaagggg tgtagtatcg attggctgct gaccggggag
     2941 ggtaatccgt ttccggatga agccccaaaa aaatcccttg cttacgatac tttgggcaat
     3001 gaagtcgata cggacgagtt tgtcttcgtg ccgagatatg atattcgggc ggctgcggga
     3061 tacgggcagt ttgtcgatca tgaggaaccg gtatttacaa tggcgttcag acggcattgg
     3121 attgagaatt atgttacccg cgatacgaaa aacctgtctg taatttccgt caagggggat
     3181 tcgatggagg gggttttgaa tgacggcgat tcgattttgg tcaatcatgg tgaaaatacg
     3241 ccgagggacg gtctgtatgt gttgcggatt aatgaaaatc tgctggttaa acgtttacag
     3301 attgtaccgg gcgggattat caatgtgatt tctgcaaacg aggcttatcc tgcttttgaa
     3361 atcaatttga acgatttgac cgatgatgtg gagattatcg ggcgtgtcga gtggttcggc
     3421 aggacgattt gagtttgggg cttgaaattg caggcggtca aacttatcta ttggaacaat
     3481 tcctttttca aaggcgaagc ctgcttgcct ttgaaggggg tttgagagag aatgcagaaa
     3541 atattatatt aaggaataac accatgtcgg atgaaagccc tattattttt actgacagct
     3601 gctgtgccaa agttgccgat ttgattgccg aagaaaacaa tcccgatttg aaattgcggg
     3661 tttttgtcaa tggcggcggc tgttcgggtt tccagtacgg atttactttt gacgaaatca
     3721 aaaacgacga cgattttgaa attgagaaaa acggtttggt ctttttggtc gatccgatga
     3781 gctatcaata tctggtcggt gcggaaatcg actatacgga aagtttgcag ggttcgcaat
     3841 tcgtcatccg caatccgaat gcggaaacaa cctgcggttg cggatcgtcg ttttccgtat
     3901 gaccgcttgg tttgtgtgat gccgtctgaa cgttcagacg gcatttttac ttttagaaaa
     3961 tatattatcg ggatgaattc acatataatc cgattgtttg aagatgaatc gggtttcccg
     4021 aaaggaacgg gcggaacggt atcaggcgta tttgttccct tatgattgag atgagtaaag
     4081 attaccgaaa cgatttgtac gatgtatatg tttcttaccc gccccaagtg gatcgcgggc
     4141 ttatccggga gtgccttaag gagaatctcg gcgaggaaaa ggcggaagga ttgatcgaat
     4201 cgctcgattc caaacctcaa gtgctggttg aggaaaaatg cacttgggcg aaacgggaag
     4261 agttgcatga ttatttcagc tatttgggtt tggatattat tacccggaga tatatggagt
     4321 tggaaacggt cgtgccgccg gaggaaggtg agggcgaagg agagggcgcg gatggggaaa
     4381 tgcccgaata tcttgaactt catggcgggc gggaagatga tatttccgca ccttcgcaac
     4441 ccgaaccgcc gacccgcaat atcaaaccgc tggttttcgg gctgctgatt gcctttttgg
     4501 gctatctgct cggtaagatt ttttgattgt ccgataaatg ctgtattcgg gattttatat
     4561 atgaaatggt tgaaacgcct gacggtcatt gtcgggactt tttaccgcta tcggctggca
     4621 ggtctgtgtg cttcgctgat gggtagcggt tggatatgcg ctctgctgaa aatgatgccg
     4681 cagtcgtcca aattgaaaaa cgaaccgcct gctgtccgtc tgcgccttgc cttggaaagc
     4741 ctggggccga ttttcatcaa gttcgggcag gtattatcta cgcgccccga tttgattccg
     4801 cacgattacg ccgtcgaact ggcaaagctg caagacaaag tgccgccttt tgacgcgcgg
     4861 ctttcgcgtg aacaaatcga aaaatcgttg ggtcagtcca tcgaaaagct gtatgcggaa
     4921 tttgaaaccg agcccatcgc cagcgcgtcc atcgcccaag tacacaaagc ccgcctgcat
     4981 tcgggcgaac gagtggcggt taaagttttg cgccccaacc ttttgcccct tatcgaacag
     5041 gatttgtcgc tgatgcgttt cggcgcggcc tgggtcgaac gcttgttttc agacggcagg
     5101 cgtctgaagc cgctcgaagt ggtggcggag ttcgacaaat acctgcacga cgagttggat
     5161 ttgatgcgcg aagccgccaa tgccggacag ctcgggcgca atttccaaaa cagcaatatg
     5221 ctgattgtgc ccaaggtgtt ttacgactac tgcaccagcg acgtgctgac aatcgaatgg
     5281 atggacggca cgccggttgc cgacatcgcc aaactcaaag cagacggcat cgatttgcac
     5341 aaactcgccg attacggcgt ggaaatcttt ttcacgcagg tcttccgcga cggctttttc
     5401 cacgcggata tgcaccccgg caatattttg gttgccgccg acaaccgcta catcgccctc
     5461 gatttcggca tcgtcggcac gctgaccgat tacgacaaac gttatctcgc catcaatttc
     5521 ctcgcctttt tcaaccgcga ttaccggcgc gtcgccaccg cccacatcga atcgggctgg
     5581 gtgcctgccg acacgcgtgc ggaagaattg gaagccgccg tccgcgccgt gtgcgaaccg
     5641 gtgttcaaca aaccgatttc gcagatttcc ttcggcttgg tgctgatgcg cctgtttgaa
     5701 gtcagccgct gcttcaatgt cgaaatccaa ccgcagcttg tgctgctgca aaaaacgctg
     5761 ctcaacatcg aaggcttggg ccgccagctc gatcccgatt tggacttgtg gaaaaccgcc
     5821 aaaccgtttt tggtgaaatg gatgaacggg caggtcggcc ctaaagccct ttggcgcaac
     5881 ctcaaaaacg aagcccccga ctgggcgcaa atcatccctt cattgccgcg caaaatcagt
     5941 gcgttgattg atgaaaaccg ccagcaggaa atgcgtgatg cctatatcca tttggtcaaa
     6001 gtgcagcagc ggcaaagcct gtggctggct gtgattgcgg ttgttttgct gctgattttg
     6061 cttttgaaat aggctttgtc cgaatcatcg cccgactccg cccgtttata aggaaatc
//
LOCUS       DAXHRP010000124         6104 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.124, whole genome shotgun sequence.
ACCESSION   DAXHRP010000124 DAXHRP010000000
VERSION     DAXHRP010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6104
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.124"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            61..444
                     /locus_tag="ACFM72_001662"
     CDS             61..444
                     /locus_tag="ACFM72_001662"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HFC6258206.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            737..1210
                     /locus_tag="ACFM72_001663"
     CDS             737..1210
                     /locus_tag="ACFM72_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HFC6258207.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMPAMNHGHHHGEAHQH"
     gene            1336..2439
                     /gene="mnmA"
                     /locus_tag="ACFM72_001664"
     CDS             1336..2439
                     /gene="mnmA"
                     /locus_tag="ACFM72_001664"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HFC6258208.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            2510..4180
                     /locus_tag="ACFM72_001665"
     CDS             2510..4180
                     /locus_tag="ACFM72_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HFC6258209.1"
                     /translation="MEKIWLDSYEKGVSAEIDITQYNSVSDVFRQSVEKFADQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLDLVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSELRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFREELPKSNVGKILRRELRQSTGK"
     gene            4292..5926
                     /locus_tag="ACFM72_001666"
     CDS             4292..5926
                     /locus_tag="ACFM72_001666"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HFC6258210.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDREMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAVKNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGVHTETDVQITFVDSESIEK
                     NKGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         1606 a         1635 c         1544 g         1319 t
ORIGIN      
        1 ggcaacgccg tacaggtttt tgttaatcca ctatattgag aacattttga aaggataccg
       61 atggaacctt cctcctacgc ggcagaaaaa aaaggcaaag gcggcatcag gcgcgtcatt
      121 aacgcattcg gctattcgat agacggcatc gccgccgcct accgttacga agcggcattc
      181 cgtcaggttt tgtggctgaa cgtactgctg gtgtgcgcgg catttttttg ggtttccgaa
      241 accgccgtcc gcctgccgtt gattatcgcg tcttttgtgt cggtcattgt cgaactgttc
      301 aacaccgccg tcgaagctgc cgtcgatcat acttcgaccg aaaaacacga gctggccaaa
      361 cgcgccaaag acgcaggttc tgccgcacaa ttgttcgcga tgctgatgtt ggcggcggtt
      421 tggctgtctg ccctgttcgg gtaaaacgct tgcagcagga tttgtaatcc tttaggatta
      481 gtatgtggta tttattattc acttaatcta catcaaattt ccaggcagta tttgtatgta
      541 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg
      601 aaccgatcca cttggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgagg
      661 caacgctgta ctggtttttg ttaatccgct ataagattaa gcacattccc cgtctgatat
      721 tataaggagc agaaagatga aaaaattatt ggcggccgtg atgatggcag gtttggcagg
      781 cgcggtttcc gccgccggag tccacgttga ggacggctgg gcgcgcacca ccgtcgaagg
      841 tatgaaaata ggcggcgcgt tcatgaaaat ccacaacgac gaagccaaac aagacttttt
      901 gctcggcgga agcagccccg ttgccgaccg cgtcgaagtg catacccaca tcaacgacaa
      961 cggcgtgatg cggatgcgcg aagtcgaagg cggcgtgcct ttggaagcga aatccgttac
     1021 cgaactcaaa cccggcagct atcatgtgat gtttatgggt ttgaaaaaac aattaaaaga
     1081 gggcgataaa attcccgtta ccctgaaatt taaaaacgcc aaagcgcaaa ccgtccaact
     1141 ggaagtcaaa atcgcgccga tgccggcaat gaaccacggt catcaccacg gcgaagcgca
     1201 tcagcactaa tctgctgaaa atgtttgaaa tgccgtctga aaaagcccgg gctttcagac
     1261 ggcattttta tgcccgcctt taaaatgtgt taaaatccgc ctttaaaaac cgccgtttcc
     1321 aaccatattc tacgcatgaa tacgacagca aacccttcca atatcatcgt cgggctctcc
     1381 ggcggtgtcg attcttccgt aaccgccgcc ctgctcaagc agcagggtta tcaagtgcgc
     1441 ggtgtgttca tgcagaactg ggaagacgac gacaacgacg aatattgcag catcaaacag
     1501 gattcgttcg atgccatcgc cgttgccgat attatcggca tcgatatcga catcgttaat
     1561 ttcgccgcgc aatataaaga caaagtcttt gcttattttc ttcaggaata cagtgcgggg
     1621 cgcacgccga atccggatgt gttgtgcaac gccgaaatca aattcaaatg ctttttggac
     1681 tacgccgtag ggcagggcgc ggataccatc gccaccggcc actatgcgcg caaagaagtt
     1741 cgcaacggcg tgcattacct gctcaaaggt ttggatcgaa acaaagacca aagctatttc
     1801 ctctaccgcc tcaagccttt ccaactcgaa cgcgcgattt ttccgttggg cggtttggaa
     1861 aaacccgaag tgcgccgcct tgccgccgag ttcaaactgc cgaccgccgc caaaaaagac
     1921 agcacgggca tctgcttcat cggtgaacgc ccgtttcgcg agtttctgca aaaatacctg
     1981 ccgaccgaca acggtaaaat ggttacgccc gaagggaaaa ccgtcggcga acacgtcggg
     2041 ctgatgttct acacgctcgg acagcgcaaa ggtttgggca tcggcggcgc gggcgaaccg
     2101 tggtttgttg cggctaaaga tttgacgaaa aacgaactga ttgtcgtgca aggacacgac
     2161 catccgctgc tctatacccg cagccttgtg atgaacgatt tgagtttcac gctgcccgaa
     2221 cgcccgaagg caggacgcta tacctgcaaa acgcgttacc gtatggcgga cgcgccttgt
     2281 gagttgcgct atttggatga agaaaccgcc gagctggtgt ttgacgaacc gcaatgggcg
     2341 gttacgccgg gccagtctgc cgtgctgtac gacggcgaca tctgtttggg cggcggcatc
     2401 atccaaacga ccgacaaacc agtcatcatc acacgataaa ggtaatgccg tctgaaacgg
     2461 ttttcagacg gcattgttcc gctcaattcc actttaaaga ccgataccta tggaaaaaat
     2521 ctggttagac agctacgaga agggcgtcag tgccgaaatc gacatcacgc aatacaattc
     2581 cgtcagcgac gtattccgcc aaagcgtgga aaaatttgcc gaccaacctg cttttcaaaa
     2641 catgggtaag acgctgactt atgccgaaac cggcaaactg gcgaccgatt tcgcctctta
     2701 tctgcaaaac gtcctcaagc tgccgcgcgg cgaacgtgtt gccattatga tgccgaacgt
     2761 attgcaatac ccgattgccc ttttcggcat tttgcaggca ggtttggtag cggtgaacac
     2821 caatccgctc tataccccgc gcgagctgga gcatcagttg aaagacagcg gcgcgaccgc
     2881 catcatcgtt ttggaaaatt tcgccaacac gctggatctg gtgctgccgc gcacgcagat
     2941 caaacacgtc atcgtcgcct ctgtcggcga aatgttcggg ctgcttaaag gttcgctgat
     3001 caatttcatc atccggaaaa tcaagaaaat ggtgcccgaa taccgtattc gggaaaccgt
     3061 ttcctttcag acggcattga aagagggggc gaagcacgtt ttccaacctg tcgcattaaa
     3121 ccgcgaagat accgcgctgt tgcaatacac gggcggcacg acaggtgttg ccaaaggggc
     3181 ggtgctgagt cacggcaaca tctgcgccaa tatgcttcag gcaaaagaat ggattaaaaa
     3241 ccagttgcgc gagggcaaag aaaccgttat cgccgccctg ccgctgtatc atatttttgc
     3301 cttaaccgtg aatctgatga tttttgccaa tgccggctcg aaaatcatcc tgattaccaa
     3361 cccgcgcgat atgaaaggct ttatcggaga actgaaaaaa cagcgggtta atgtatttat
     3421 cggcgtgaac acgctgttta acgcgatggt taaccgtcct gattttgccg aagtcgattt
     3481 ttcagaattg cggctgactt tgggcggcgg tatggcgacc caaaaagccg ttgccgaaaa
     3541 atggaaaaaa atcaccggca cgcccatcgt cgaagcctac ggtctgaccg aagccagccc
     3601 cggcgtgtgc tgcaacccct taaacatcga atcatacagc ggcagcatcg gtttgcccgt
     3661 ctcgtccacc gaagtcgaac tgcgcgacgc aaacggcaaa gaagtccccg tcgggcagcc
     3721 gggcgaattg tgggtaaaag gccctcaagt gatgcaaggc tactggaacc gtcccgaaga
     3781 aaccgctaaa gccatagacg cgcgcggttt cttggaaacc ggcgatattg ccgtcatgga
     3841 cgaaaaaggc tggttgaagc tggtcgatcg taagaaagac ctcgtcgtcg tttccggatt
     3901 caatgtttat ccgaacgaaa tcgaggaagt catcgcgcat cacggcaaag tgatggaagt
     3961 cgcctgtatc ggcgttcccg acgaaaaaac cggagaagcc ctaaaagtat ttgtcgtcaa
     4021 aaaagacccg tcattgacca aagaagaact tatcgccttt tgccgcaccg aattaaccgc
     4081 atataaagta ccgaaaaaca ttgaattccg tgaggaactg ccaaaatcca acgtcggtaa
     4141 aattctgcgt cgcgagttgc gccaaagtac cgggaaataa agaaaagatg ccgtctgaaa
     4201 acagccgtcc accgttcaga cggcatccgt ccgtttgcca gaaccgcgcg cttcacgtta
     4261 aaatcacgca ttccaatatg ggtattccat catgaccaaa ttcattttcg tcaccggcgg
     4321 cgttgtctcc tcactgggta aaggtatcgc cgccgcttct attgccgcca tcctcgaatc
     4381 gcgcggcttg aacgttacca tgctcaagct cgatccttat atcaacgtcg atcccggcac
     4441 gatgagcccg ttccaacacg gcgaagtgtt cgtaaccgac gacggcgcgg aaaccgacct
     4501 cgacttggga cactacgaac gctttatcga ttccacgatg acccgccgca acagcttcag
     4561 cacggggcag gtgtacgaaa acgtcatcgc caaagaacga cggggcgact atttgggcgg
     4621 cacggttcaa gtcatcccgc acattaccga cgaaatcaaa cgccgcatcc acgaaggcgc
     4681 ggcaggttac gatgtggcga ttgtcgaaat cggcggcacg gtcggcgaca tcgaatcgct
     4741 gccgtttttg gaagccatcc gccagatgcg aagccagttg ggacgcaaca acaccctgtt
     4801 cgcccacttg agctacgtcc cctacatcgc cgccgccggc gaaatcaaaa ccaaaccgac
     4861 ccagcatact gttaaagaaa tgttgagcat cggtttgcaa ccggacatcc tgatctgccg
     4921 tatggacaga gaaatgcctg cggacgagcg ccgtaagatt gcattgttct gtaacgttga
     4981 agaacgtgcc atcgtgggca gctacgatgt ggacagcatc tacgaatgcc ccgaaatgct
     5041 gcacgaccaa ggcatcgaca acatcattac cgagcagttg cagcttaacg tgcaacaggc
     5101 ggatttgacc gcgtggaaaa aaatcgtcca cgccgtcaaa aatccgaaac acaccgtcaa
     5161 aatcgcgatg gtcggcaaat acgttgattt gaccgaatcc tacaaatcac tgattgaagc
     5221 cttgaaacac gcaggtgttc acaccgaaac cgacgtacaa attacctttg ttgacagcga
     5281 aagcatcgag aaaaacaagg gcgacgtttc tatgctcaaa gatatggacg ccatcctcgt
     5341 tcccggcggt tttggttcgc gcggcgtgga aggcaaaatc gccgctgtgc gctatgcccg
     5401 cgaaaacaac gtgccatact tgggcatctg cctcggtatg cagattgcgc tgatcgaata
     5461 cgcccgcgac gtggcaggtt tgaaaggtgc gaattccacc gagttcgacc tcaaatgcgc
     5521 cgcccccgtc gttgccctga ttgacgaatg gcaaactgcc gacggcagcg tcgaaacccg
     5581 cgacgaatcc gccgatttgg gcggcaccat gcgtttgggc gcgcaagaag tcgaattgaa
     5641 agcaggcagc ctcgccgcca aaatctacgg cagcgaacac atccgcgaac gccaccgcca
     5701 ccgctacgaa gtcaacaaca actacgttcc tacgctggaa caggcaggtt tggtcatcgg
     5761 cggcgtatcc gccggacgcg aacgcttggt cgaaaccatc gaactgccga accatccttg
     5821 gttcttcgcc tgccagttcc accccgagtt tacctccaat ccgcgcaaag ggcatccttt
     5881 gttcaccgcg tttgtcaaag ctgcgttgaa caataaaaaa gcctgataaa gcgttacttg
     5941 atgatcaaaa tgccgtctga aagcctgaat gaagactttc agacggcatt ttcgcaaatc
     6001 ggggattata aaagccatca atttaatttt tatggtttta tctaatattt accaactgaa
     6061 tattgttaag cggggcgtga aactcaagtt gagacctttg caaa
//
LOCUS       DAXHRP010000125         6103 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.125, whole genome shotgun sequence.
ACCESSION   DAXHRP010000125 DAXHRP010000000
VERSION     DAXHRP010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6103
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.125"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(336..2372)
                     /locus_tag="ACFM72_001667"
     CDS             complement(336..2372)
                     /locus_tag="ACFM72_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HFC6258211.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVERLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDTVELPSQFMENFVWE
                     YDVLAQMSAHEETGVPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(2460..3332)
                     /locus_tag="ACFM72_001668"
     CDS             complement(2460..3332)
                     /locus_tag="ACFM72_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HFC6258212.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3602..5992
                     /gene="gyrB"
                     /locus_tag="ACFM72_001669"
     CDS             3602..5992
                     /gene="gyrB"
                     /locus_tag="ACFM72_001669"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HFC6258213.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASAETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIISDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
BASE COUNT         1383 a         1626 c         1749 g         1345 t
ORIGIN      
        1 gatttctgtt tttgattttt ttgtttttgg ggaatgacag gatttgagat tgcgggcatt
       61 tatcaggtaa aacggaaatt aaacgttgcg aaaatttatc cgaaatcaca gcaacttttc
      121 cgcgtcattc ccacgaaagt gggaatctag gacttaggac cggagaaacc tttttacccg
      181 ataagtttcc gtgccgaccg gtctggattc ccgcctacgc gggaatgacg ggattttggc
      241 ttactgtttt tgtgaaaatg gcgaaaccgc gcaaatgctg atgccgtctg aaacactgtt
      301 tgattgtttc agacggcatt ttttgttcac atcgatcaag ccgcgttgtc gaaaccgctg
      361 tggcgcaaga gtgcgtctat gcgcggttcg cgtccgcgga aggctttgaa ggattctgcc
      421 gcgctgcgcg atccgccgac ggcgaggatt tcctgccaaa agcgtttgcc tgtggcggcg
      481 acatcgtcgc tttcttcaaa ggcggcgtat gcgtccgcgc tcaatacttc cgcccacgcg
      541 tagctgtaat agcctgcgga atagccgcct gcgaagatgt ggccgaagct caaggcgaag
      601 cggttgtatt cgggcggttg gatgacggcg acttctttgc gcacgctgtc taaaacctgt
      661 tgccagtttt tcagacggcc ttcgtcgtct tcgctgtaaa tcatcatatc aaagagggcg
      721 aactccattt gccggacgag gaacatgccg cgttggaagt ttttggcggc gagcattttg
      781 tcgaagagtt ctttcggcag gggaacgccg gtttcttcgt gggcggacat ttgtgccaag
      841 acgtcgtatt cccagacgaa attttccata aactggctgg gcagttcgac tgtgtcccat
      901 tctacgccgt tgatgccgga tacgcccagt tcgtccactt gggtaagcag gtggtgcagc
      961 ccgtgtccgg tttcgtggaa gaggatgagg atttcgtcgt ggctcaaacg cgcttctctg
     1021 ccgccgacgg gcggggcgaa gttgcagacg aggtaggcgg tgggcagttg cagcgtgccg
     1081 tctgaaaaac ggcggcgacc tttgtagtcg ttcatccacg cgccgccgcg tttgccttcg
     1141 cgtgcgtaca aatccatata aacgccgcct atggtttcgc cgttttgttg caattcaaaa
     1201 tagcgcacgt ctttgtgcca gacggggacg gttttttcgg taaatccgat gccgtagagt
     1261 tttttgattt gggcgaacag tccgtttaat actttgccga cggggaagta ttttttgact
     1321 tcggtttcgc tgaacgcgta tttggcttcg cgcagttttt cgctggcgta gcccaagtcc
     1381 cacggttgca aatcggcgag gttcaggctt tcgcgggcga aggctttgac ttcggcgagg
     1441 tctttttcgg cgtagggttt ggcgcggcgg gcgaggtcgt gcaggaagtt taaaacttgt
     1501 tcgggcgtgt ccgccatttt ggttgccagc gacaattcgg cgtagttttt gaagccgagc
     1561 agtttggcgg tttgcagggc gtttgcgagc gtgcggtcga tgttggcggt gttgtcgaat
     1621 ttgccgtcgt ctgaaagttc gctggcgcgg gtaacgtagg cgcggtagat ttgttcgcgc
     1681 agttcgcggt tgtcggcgta ttggatgacg gcgaggtagt gtggaatctg caagccgatt
     1741 ttgtagcctg ttttgctttc gctttgcgcg gcggcggcaa acatggcgag cgcgtcttcg
     1801 ggaatgccgg caagcggtgc ggcatcgtca aagtaaatgc cgaacgcgtc ggtcgcgtct
     1861 aggacgtttt gggagaattt ggcggaaagt tgcgcgcctt cggtttgcag ttttgccagt
     1921 tctgcctgct gttcgggcgg cagttccgcg ccgctgagga cgaaatcgcg cagatcgtgg
     1981 ttgagtttgg ttttttgcgc gggggagagg gtgtcgaact cgggggagtt tttgatggtt
     2041 ttgaagcggt tgtacagctc gatgtcttgt ccgatttcgg tgaagaagac ggtgatttcg
     2101 ggcatcagtt cgttatagac ggcgcgcagt tcgggcgtgt cggcgacgga gttgaggtgc
     2161 gacaccacgc cccaaatcct gccgacgcgc tcggtgatgc cggtcagacg ctcgacggtg
     2221 ttcgcccagc cggtgtgcgt ttgggctttg atggcggcga tttgttcgcg cgcttcggca
     2281 atggcggttt gcagggcggg tttgatgtct tcggttttga tttgatcaaa acggggttct
     2341 tcgcccaagt ggagcagtgc gttgtcagtc ataagatggg tttcctttgc gtgttgtgct
     2401 tcagacagca tatcggcaat atgccgtctg aagccggaaa tggggtcggt cggggaaagt
     2461 taaagtgttt cggagccggc ggggtaattt aacaggcggt attgtacgcg caaaaattcg
     2521 tccataaccg cctgttggat ttccagccgc tttgaaacgg gggaggcgaa gcggacgatg
     2581 atgcggtatg ccttgtcatc gtacggcacg cgggtaacgc gcggtctggc ggcgggcgtg
     2641 ataaacagtt tttccgcctg cacgttttcc aaatgccgtt ggatggcggg gatgtagggc
     2701 gcgcacaagg gctcgagtac ggctttcaga cggcatacgg cttcatccga atccaaatgg
     2761 atggggacgg ggatttcgac cgtatggatg acgtagtcgc ccaaaatatt gtcgcggcgc
     2821 acgggatggc tcaacaacag gctgttgggg aaagaaacgg tggttcccgc aagctgtccg
     2881 accagggggt tcggaccgac ctgcatcatc agcgtgttca acaggttgat gtcgaccacg
     2941 cgcccgcgca ggccgttgat ttcgatatag tcgccgaccg agtattgctg ggtggcagac
     3001 cttaaaatac tgcccgacag acacataatc agttcctttg tcgccacgac gaccgccgcc
     3061 gccaccgcaa acatcgacaa agccagcgtt tggatttgcg ccgaccagat aaatgccagc
     3121 gaaaacagca ccaaaagcag cgttatattg cggctggcaa ccaaaaaccg ccgcttgctt
     3181 tcgatgccga aatccggatg ccgtttgaag tggatattca acagaagggc gcgcgccagc
     3241 agcaaagccg cgaccaccgc cacggattcg accgcctccg cacgtatcgg gacggcaccg
     3301 agccaagtgt ccaacatatt ccatatttcc atttccgcgc ccctgtccga aaagtatagg
     3361 gtgtagattt tagtggcaaa aaaacgcttt tgccacttta cgggacaatc cccgacctga
     3421 tgccggaggc aaacgtaccg tttcatcttt tcccggcggc acactgatgc ggataacgct
     3481 gaattaggcg gcaaaatcgg ctataataca caattatata tgccgtcccg cccgcttttt
     3541 ctacaaggtg cggacttgtt ttggcggcat cgcaaaatct tttcaaaatc cggcaaaaaa
     3601 tatgactgaa caaaaacacg aagaatacgg cgccgacagc attcaggtgc tcgaaggctt
     3661 ggaagcggta cgcaaacgcc ccggtatgta catcggcgac acgcaggacg gcagcggcct
     3721 gcaccacatg gtgttcgaag tattggacaa cgccattgac gaagcactcg ctggacattg
     3781 cgacaaaatc accgttacca tccacgccga ccattccgtc agcgtcgccg acaacgggcg
     3841 cggtatgccc accggcatcc acccgaaaga aggacgctcc gccgccgaag tcatcatgac
     3901 cgtattgcac gcgggcggta aattcgacaa caacagctac aaaatctccg gcggcctgca
     3961 cggcgtgggc gtgtccgtcg tcaacgcgct gtccgactgg gtaacgctga ccatctaccg
     4021 cgacggcaaa gaacacttcg tccgcttcgt gcgcggcgaa accgaagagc cgttgaaggt
     4081 tgtcggcgat tccgataaaa aaggcacgac cgtgcgcttc ctcgccagtg cggaaacctt
     4141 cggcaacgtc gaatacagct tcgacatcct cgccaaacgc atccgcgaac tttcgttcct
     4201 gaacaacggc gtggacatcg aattgaccga cgagcgcgac ggcaaacacg aaagcttcgc
     4261 cctttccggc ggcgtggctg gattcgtgca atacatgaac cgcaaaaaaa cgcccttgca
     4321 cgaaaaaatc ttctacgcgt tcggcgagaa agacggcatg agcgtcgaat gcgcaatgca
     4381 atggaacgac agctatcagg aaagcgtgca gtgcttcacc aacaacatcc ctcagcgcga
     4441 cggcggtacg cacctgaccg cgttgcgcca agtgatgacg cgcaccatca acagctacat
     4501 cgaagccaac gaagtcgcca aaaaagccaa agtggaaacc gccggcgacg atatgcgcga
     4561 aggtttgacc tgcgttttgt ccgtcaaact gcccgacccc aaattttcgt cccaaaccaa
     4621 agacaaactg gtttccggcg aaatcggtcc cgtcgtcaac gaagtcatca gccaagccct
     4681 gaccgacttc ctcgaagaaa accctgccga agccaaaatc atcaccggca aaatcgtcga
     4741 tgccgcccgc gcgcgcgaag ccgcccgcaa agcccgcgaa atcacccgcc gcaaaggcgt
     4801 aatggacggc ttggggctac ccggcaaact cgccgactgc caagaaaaag accccgcatt
     4861 gtcagaactt tatctggtcg agggcgattc tgcaggcggt tccgccatgc aggggcgcga
     4921 ccgcaaattc caagcgattt tgccgcttaa gggcaagatt ttgaacgtcg aaaaagcgcg
     4981 ctttgaaaaa atgctcgcca gtcaggaagt agccgctttg attaccgcgt tgggcgcggg
     5041 catcggcaaa gaagaattca atgccgagaa gctgcgttac caccgcatca ttatcatgac
     5101 cgatgccgat gtggacggcg cgcacatccg caccttgctt ttgaccttct tctaccgcca
     5161 aatgcccgaa ctggtcgagc gcggctacat ctatatcgcc cagccgcctt tgtataaagc
     5221 gaaatacggc aaacaggaac gttacctcaa ggacgagttg gaaaaagacc aatggctgct
     5281 cggtcttgcc ttggaaaaag ccaaaatcat ttcagacggc cgcaccatcg aaggcgcaga
     5341 acttgccgac accgccaaac aattcctgtt ggcaaaaacc gtcatcgaac aggaaagccg
     5401 cttcgtagac gaactcgtcc tgcgcgccat gctacacgcg tcgcccattg atttgacgtc
     5461 gtctgaaaac gccgataaag ccgttgccga actttccggt ctgcttgacg aaaaagaagt
     5521 cgccctcgaa cgcatcgaag gtcatgaagg acaccggttc atcaaaatca cgcgcaagct
     5581 gcacggcaac gtcatggtca gctacatcga acccaagttc ctcaacagca aagcctacca
     5641 aaccctcacc caaaccgccg ccgcgctcaa aggcatggtc ggcgagggtg ccaagcttta
     5701 caaaggcgaa aacgggtacg acgcggacag ctttgaaacc gctttggaca tcttgatgag
     5761 cgttgcccaa aaaggtatgt ccatccaacg atacaaaggc ttgggcgaga tgaaccccga
     5821 gcagctgtgg gaaaccacga tggatcccgc cgtgcgccgc ctgttgaaag tgcgcatcga
     5881 agatgccatt gccgccgacg aagtattcgt taccctgatg ggcgacgagg tcgaaccgcg
     5941 ccgcgccttt atcgaaaaca acgcgctgat tgcccaaaat atcgacgcat aagtgccgtt
     6001 ttaaaaaagg agacgggcat cgtgccgcgt ctccttttgg tttgtcaaac ggaagccata
     6061 ccgtctgaaa ccgcctttcg gagcaaaacc atggtcagca ttt
//
LOCUS       DAXHRP010000126         6051 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.126, whole genome shotgun sequence.
ACCESSION   DAXHRP010000126 DAXHRP010000000
VERSION     DAXHRP010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.126"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(86..1489)
                     /gene="mtrE"
                     /locus_tag="ACFM72_001670"
     CDS             complement(86..1489)
                     /gene="mtrE"
                     /locus_tag="ACFM72_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HFC6258214.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAALNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1544..4747)
                     /gene="mtrD"
                     /locus_tag="ACFM72_001671"
     CDS             complement(1544..4747)
                     /gene="mtrD"
                     /locus_tag="ACFM72_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HFC6258215.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LRATYPGASAQVMEDSVLSVIERNMNGVEGLDYLSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4759..5997)
                     /gene="mtrC"
                     /locus_tag="ACFM72_001672"
     CDS             complement(4759..5997)
                     /gene="mtrC"
                     /locus_tag="ACFM72_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HFC6258216.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEANLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPVVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIASITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1362 a         1713 c         1624 g         1352 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataaaga aagaaatgcc gtctgaaacc ttatcgtttc
       61 agacggcatt ttattgcccg accggttatt tgtcggtttg ggtatcccgt ttcaatccgc
      121 cgccgagtgc cttgtacaaa tcggcaaggt tttcggcgcg ggtcagttgt gccgacaaag
      181 ccgcaccctc cgccgcatag ctgctgcgtt ccgcatcgag caaatcgagc gcgccggata
      241 cgccgtgctt gtaacgcagg ccgaccaagc gcaacgcttc tttagaggcg cggctttgtt
      301 tgcttaaagc gtcataggct ttatccagct gctcgcgcgc cgccaatgcg tttgccacgt
      361 cttgaaatgc ggattggacg gcggattcat aggcaacgat ttgtgcctgt tggcgcagct
      421 tggctacatc aaggttcgcc ttgttcgtac cccaggtaaa aatcggcagg gtaatagacg
      481 gcgcgaacga ccaaacgccc gtgccgcttt tgaacaaccc acccaattcg gcagaacccg
      541 taccgacggt tccggtcagg cggatggatg ggaaaaaggc ggcgcgtgcc gcaccgatat
      601 tggcgtttgc ctgtttgagc gcgtgttcgg cagcacggat atcgggacgg tcgagcaata
      661 cttcggaact caaaccggcc ggcagttttt caacaaaaaa ctgcttgtcc agcggcaaac
      721 cggcaggcag gtcttcgggt atcggttggt taatcaaggt tgccaaggca ttgcgcgcct
      781 gttcgcggct gcgcgcggca tgggcataat cggctttggc agattcgatc agggcttcct
      841 gctgacgtag ggcgacggcg gaaatcacgc ctgccttgta acgtaattcg gacagcttgt
      901 aggtttcctc gcgcgttttc aaaacacgtt gcgccaaaga catcgcttct tcggcgtaac
      961 gttcgttgaa ataggctttg gcaacggtgg caatcaggct caaatgtgcc gcatcgcggt
     1021 tggcggtgct ggcgaaatag ccttgcagtg ccgcctcgct gctgctgcgt acacgcccga
     1081 acagatcgag ttcgtaagat gccgcaccca gtccgacttt gtagctgctg cttacattgc
     1141 cgccgctcaa gctgccttgg cgcgagtcgt tcgcattggc ggcaagcgtg ggcaggaggt
     1201 tgttgcgctc aatcatgtat tgtttgcggt agatttcgct gttcaatgcg gcggtacgca
     1261 aactggtatt gcgctcgagt gcgatgtcga tcagcttttg caggcgcggg tcggcaaaat
     1321 agtcatgcca acctaaatcg accgcacgga tgccgctgtc ggcggtatcg tttttgaacg
     1381 tttcggcaac ttcgactttg ggctgctcgt attggggaat catggtgcag gcggataatg
     1441 cgaaggctgc tgcaacagaa gtcaaggtgg ttttcaatgt agtatccata aaaaagtcct
     1501 gatgccgtct gaaaacccgt gggcgttcag acggcatggt tgcttaatgt tggctgtcgt
     1561 ccgaaccggt gatgcccgct tcggcggcgt gttttactgc catttcgtgt tcgtgcgcgg
     1621 tttctttgaa gaatttgcgc accaccacat agaaaagcgg aacaaggaac acggacaaga
     1681 gcgtgccgat gagcatcccc cagaatacgg tcgtgccgat ggcgcgctgg ctggcagaac
     1741 ttgcaccacc ggcaatatac aggggaacca cgcccaaaat aaaggcgaac gaggtcatga
     1801 taatcggacg gaaacgcagg cgggcggctt ccaaagcggc ttcgaccgcg cttttccctt
     1861 gcgcttgaag gtctttggca aactcgataa tcaaaatcgc gtttttcgca ctcaaaccca
     1921 tcacggtaac gaaaccgact tgaaagtaga tgtcgttggc gaacgaggga acgctgccca
     1981 acagtccttc aaacaggttg cgcccggtta cgcccgcagc cgcaccgatc aaacccaacg
     2041 gaatcacaag gatgaccgcc agcggaatcg accagctttc ataaagcgcg gcaagtacca
     2101 aaaatacggc tgcaaccgcc aaaccgtaca aaatcagggt ttgcgagccg ccttttgcct
     2161 cttcgcgcga ctgtccgccc cattcgaagc tgtaaccgcc gcccaattcg tcaaccattt
     2221 tttgaaccgc cgccatagcc tgcccggtgg aaacgccggt tgcaggcgaa gcggacagct
     2281 tcatcgaagg ataaccgttg aagcgtacgc tctgttccgt accgttttcc caagaaacag
     2341 tagcaatggt ggaaagcggt acggcgacgc cggatttgtt cggcacggtc aggttcaaaa
     2401 tatcggcagg ctgcatacgg gcatcctcgt cggcctgcac catcacgcgt tgcagacggc
     2461 cttggttcgg gaagtcgctg acataagacg aactcagcgc acttgccaat gcggtgcgga
     2521 tgtcggcaaa cgaaatgcct tgcgccgccg cggcggcacg gttgatgtcg attttcaact
     2581 gcggcgagtc ttccaaaccg ccagcacgga cggtgctggg gtcaaacaaa ccgctggcac
     2641 gcattttctg aatcaactcg ttgcgcttcg ccagcaatgc ggtatggccg gtattattgc
     2701 ggtcttgcag gttgatgctc aggcccgaac cattgcccaa ctccagaatc ggaggcggga
     2761 cgacggcgat gccaaaaccg tctttaagcg tccccatcat catacccgtc agcttgccgg
     2821 caatcgcaac ggcatcgctg ccgggcgcgg tacgctcgtt ccaatctttc aatatggcaa
     2881 aacccatcgc catattctga ccgctgcccg aaaagctgaa gccggaaacg gtaatgatgt
     2941 tttctatttc aggaatgctt ttcgccagtt gggtaacttg cgccaaagtc gcattggtgc
     3001 gctcttgggt cgctcctgca ggcagttgca cgctgaccat gacgaagcct tggtcttcgg
     3061 tcggcaggaa tgaagtcggc aggcgcataa acaggaacac gcccacaacc gccaagccga
     3121 tatagacaac catcatgcgg aaagtcttac gcagcacttt ggcaacccgg ccttcgtaac
     3181 cgtgcgtcca actgttgaat ttcttgttaa accagccgaa gaaacctttt ttctcttcgt
     3241 gatgcccttt cgggattgtc ttcaacattg tggcacacaa agcaggggta agggtcagcg
     3301 caaggaaggc ggagaatgcg attgatgacg ccatcgtcag ggcaaactgt ttgtaaatat
     3361 tgcccgtcgc cccgctgaac atcgccaacg gtacgaacac ggaaatcaga acggcggtaa
     3421 taccgatgac cgcgcccgaa atctgaccca tcgctttttt ggtcgcttct ttgggcggca
     3481 agccttcacc cgccataatg cgctcgacgt tttcaaccac cacaatcgcg tcatcgacca
     3541 cgatgccgat gaccaaaacc atcgcaaaca tggtcagtac gttaatcgac atgcccatat
     3601 aagagatgaa ggcgaaaccg cccaacaacg aaatcggtac gacgatggtc ggaatcagcg
     3661 tataacggat gttttgcagg aagagataca ttacgacaaa caccagcacc atcgcttcga
     3721 ttaaagtatg aatcactttt tcaatcgaaa tttcgacgaa tttggaagta tcgtaagggg
     3781 ttttccagct cataccctga ggaaagtatt tttccaacgt cgccatgcgt tctttaaccg
     3841 cctttgccgt cgccatcgca ttgccgctgt tggacagcat caccgccata ccggtggtat
     3901 ttacaccgtt cagacgggtt gaggaagaat agtcttccat acccagtccg acccttgcca
     3961 catccttcag gtaaacatta gaaccgtcgg tattggcgcg gaggatgacg ttgccgaatt
     4021 cttctgccgt acccaactgc ccttgcgccg ttacggtagc cgtaaccgtc tgtccgcgaa
     4081 cggcgggaag cgaaccgata gaacccgctg aaatctggac gttctgggcg gacagcgcac
     4141 tgccgatatc ggcaaacgac aaattgtagt tttgcagttt cttaggatca acccaaatcc
     4201 gcatcgcgcg ttgcgcgccg aacaggcgta cctgccccac gccttcgata cgctgcaact
     4261 cgggaacgat attacgctgc gcgtagtcgt tcatctcttc ggttgactgc acatccgacg
     4321 aaagcatcac aatcatcagg aaattggaac gcgccttgga tacggttacg ccgtattgct
     4381 ggacggttgc cggcagcgtg ctcaatactt cggaaagctt gttctgcact tccacctgcg
     4441 ccagattctc gtcggtatcg ggcgtaaagg tcaggctcac gctgccgctg ccgctcgaat
     4501 cggcggaagt ggacagataa tccaaacctt ccacgccgtt catattccgc tcgatcacgg
     4561 aaagcacgct gtcttccatt acctgcgcgg acgcgcccgg ataagtggcc ctcagggtga
     4621 tggtcggggc ggcgacagac ggatattgcg aaacaggcag gcttttaatg ccgaaaatac
     4681 ccgccgcaat aatgaaaatc gaaataaccc acgcgaaaat ggggcggtcg ataaaaaatt
     4741 tagccatcga tgccttcctt attccgcttc agaagcagtt ttggcttcag atgccgtctg
     4801 aacgccggat tgaggcgcgg cggcttggtt ttcagacggc gcccattctt tgggcgttac
     4861 ctttttcgca cccgttatac tggcgatact gatgccttcc acaaccacct tgtccccgtc
     4921 cttcagaccc gacgtaacaa tccaattcgt accctgctgt tgcgcaaccg ttacctcgcg
     4981 gggttccata ccgccttggg cattcacaat catcacggta tctttcgcac cgcgcgttac
     5041 cgcctgctgc ggcacaacaa atgcgttatc caccgccact tggtccatca gcacgcgcac
     5101 atacagaccg ggcatcagga tattctgatc gttcggtacg gcggcgcgca gggtaatctg
     5161 accggtcgat tcgttgacga ccggatcggc aaacagcagg cggccttttt cagggtaaac
     5221 tgtgccgtcg tcaaatttga tgccgaccgc aatcacacca tccgccgcca gcagtttgcc
     5281 ttcggctatc tgacggcgca atttcatcac ttcggatgca gactgggtaa cgttcacata
     5341 catcggattg gtttggcgga tggttgccag cacggtcgta tcgcccgcat tcaacagcgt
     5401 accttcggaa actttggact gaccgataaa gccggaaatc ggcgcggtaa tgcgcgaacg
     5461 gttcagattg atgccggcag atttgatcgc cgcctgtgct gctttgacac ctgcctcggc
     5521 agaacgtttc gccgttaccg cagcatcgta ttcctgccgg ctgacggctt cggcggcaac
     5581 caaaggcttg tatcgcgcca aatccgcatc cgctttggca agcgttgcct gagccgttgc
     5641 cagttgcgcg cgcgcgcttt ccagatttgc ttcataagtg gaactgtcga tctgatacag
     5701 cggctgtccg gcacggacat aactgccttc ttggaacagg cgtttttgga taatgccgcc
     5761 aacttgcgca cggacatcgg cggtacgcag cgattccaaa cgtcccggca actcgacggt
     5821 caacgcaacg gtttgcggat ggacggttac gacaccgacg acgggcgcag gggcttcccg
     5881 accagcaggc tgcccgccct gcgccgcgtc tccgccttta ccgcaagacg acagtaccaa
     5941 tgcaacggcg gcagccaacg cggccgcacg catcgcctta aaagcataaa aagccattat
     6001 ttatcctatc tgtctggttt gatgtaaagg gttttgccaa tcaacaggca t
//
LOCUS       DAXHRP010000127         5820 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.127, whole genome shotgun sequence.
ACCESSION   DAXHRP010000127 DAXHRP010000000
VERSION     DAXHRP010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5820
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.127"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            26..1363
                     /locus_tag="ACFM72_001673"
     CDS             26..1363
                     /locus_tag="ACFM72_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC6258217.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRVLRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIIGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLGIL"
     gene            complement(1425..2450)
                     /locus_tag="ACFM72_001674"
     CDS             complement(1425..2450)
                     /locus_tag="ACFM72_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC6258218.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADGEKRNGDEKRN
                     ENVFFWKGVALGSGAELRLFGVDNRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPPADFLELLSLCRDIHALTGGAFDPTVQALWKLYADYFAAHPDAETPPPQN
                     SVDEALKRVGFGKVSFDDREIRFAEKGMGLSLNGIAQGYITDKVVALLKANGVPAALV
                     DMGEIRGFDTNGRRTWNVGIRNPDDEEGVLANITMKDKAFATSGGYGTVMDKAGRFTH
                     LFDPRTGVSTPRYKSISVMADDAAVADALSTAFSIMDLHLIRSVAESRQLKVWLLMPD
                     NTLNEIG"
     gene            complement(2459..3253)
                     /locus_tag="ACFM72_001675"
     CDS             complement(2459..3253)
                     /locus_tag="ACFM72_001675"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HFC6258219.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAAL
                     QLEREPCALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            3675..5009
                     /gene="gdhA"
                     /locus_tag="ACFM72_001676"
     CDS             3675..5009
                     /gene="gdhA"
                     /locus_tag="ACFM72_001676"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HFC6258220.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFEKQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            5151..5525
                     /locus_tag="ACFM72_001677"
     CDS             5151..5525
                     /locus_tag="ACFM72_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258221.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            5569..>5820
                     /locus_tag="ACFM72_001678"
     CDS             5569..>5820
                     /locus_tag="ACFM72_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HFC6258222.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQ"
BASE COUNT         1434 a         1512 c         1402 g         1472 t
ORIGIN      
        1 accttcacat ttcttaataa attttatgag taaccatact tcttggtcgt ccaaaatcgg
       61 tttcgtactt gctgcggcag gttcggccat cggtttgggc gcgatttgga aatttcctta
      121 tacggcaggc accaacggcg gcgcggtgtt tttcctgctg tttttgatat ttaccgtctt
      181 ggtcgccctg cccgtccagc ttgccgaatt ttatatcggg cgcacgggcg gtaaaaatgc
      241 cgtcgattcc ttcagggttc tgcgtccggg cacgcaatgg ctttgggtcg ggcgtatggg
      301 cgttgccgcc tgctttattt tgctgtcgtt ttacagcgtg gtcggcggat gggtattaaa
      361 ttatgtcgtc cacagtttta cgggggcggt tcataccggc gcggactttg aagccttgtt
      421 cggcgcgacg atttccaatc cggcaggttc gctgtcctat caggctctgt ttatgctgat
      481 tacggtttgg gtggtcaaag gcggcatttc agacggcatt gaaaaggcaa accgttatct
      541 gatgccgggg ctgtttatcc tctttattgc gctggcaatc cgttcgctga cgctgccggg
      601 tgcaatggag ggcgtgtctt tcctgctcaa accgaattgg tcgtacttta aagccgatac
      661 gatgattacg gctttaggcc aggcgttttt tgccttgagc atcggcgttt ccgctatgat
      721 tacctatgct tcgtatttgg gaaaagatca ggatatgttc cgctcggggc atacgattat
      781 gtggatgaac ctcttggttt cgctgttggc aggtttggtg atttttccgg cggtgttcgc
      841 cttcggtttt gaaccgagcc aggggccggg attgattttt atcgtattgc ccgcagtgtt
      901 tatgaagatg ccgttcggta cggttttgtt tgcggtattt atgctgctgg tcgttttcgc
      961 cacgctgact tcggcatttt cgatgttgga aacggtcatt gcctcaacca tccgccaaga
     1021 cgagcgcaaa cgcaaaaaac acacttggct tatcggcacg gccattttca ttatcggcat
     1081 cccgtccgcg ctgtctttcg gcgtatgggg cgagtttaag gttttcggca aaaccatttt
     1141 tgatttgtgg gactatgtta tttccgccgt cattatgccg attggtgctt tgagtgtttc
     1201 catctttacc gcctggattc aggacaagca gtctgtgtta aaagatgccg gcgcgggcag
     1261 caccgtacca cgggcagtgc tgctgctgtg gctgaatacc ttgcgctacc tcgccccgat
     1321 tgccattatt atcgttttcg tcaattcttt gggcatcctt taaaagccct ccaaacggca
     1381 aaaatgccgt ctgaaagcct ttcagacggc attttgcttc aagttcagcc tatttcgttc
     1441 aaagtattgt ccggcatcag cagccaaacc ttaagctgcc tgctttcggc aaccgaccgt
     1501 atcaagtgca gatccataat ggaaaacgcc gtcgacaagg catcggcaac cgccgcatca
     1561 tccgccatta cgctgatgct tttataacgc ggcgtactca cgccggttcg cggatcgaac
     1621 aaatgggtaa acctgcccgc tttgtccatc accgtcccat agccgcccga agtggcaaac
     1681 gctttgtctt tcatcgtgat atttgccaac acgccttctt cgtcgtccgg attgcggatg
     1741 ccgacattcc aagtccgcct gccgtttgta tcaaaccccc tgatttcgcc catatcgacc
     1801 agcgcggcag gcacgccatt tgctttcagc aacgcgacga ccttatccgt aatatagcct
     1861 tgcgcgatgc cgttcaagga caaacccata cccttttcgg caaaacggat ttcacggtcg
     1921 tcaaacgaga ctttgccaaa gcctacccgt ttcagggctt catccacgct gttttgaggc
     1981 ggcggtgttt ccgcatcggg atgagcggca aaataatcgg catacagttt ccacaacgcc
     2041 tgcactgtcg gatcgaacgc gcctcccgtc agcgcgtgaa tatcgcggca caggctcaac
     2101 agttccaaaa aatccgccgg cggcgaagtc aaataaccgt cacggttcag acggctgatc
     2161 aggctgtctt cacggtaaag gctgaacatt ttttccaaac gcgccacttc cgccaaaacc
     2221 ttgttgacca aatccgccgc ctgtctgtta tccacgccga acaggcgcag ctccgcaccg
     2281 gaacccagcg cgacaccttt ccagaaaaac acattttcat tgcgtttttc atccccgttt
     2341 cgtttttcac cgtcggcggc aaaaggattc ggcaggaaag aaaccgccgc gcccgccgcc
     2401 gcaacggcgg caaccgtcaa aaaacgcctg cgcccgaaat gcctgcccat accgcctcct
     2461 aaaccgacac tgccgccttg atatgcggat gagggtcgta accttccaac tcgaaatctt
     2521 caaatttgaa ggcaaacaaa tctttgactt caggattgat tttcatcact ggcaaggcgc
     2581 acggttcgcg ttccaactgc aatgcggcct gctcgaaatg gttactgtac aaatgcgcat
     2641 cgccaaacgt atggataaac tcaccggctt ccaatccgca tacttgcgcc atcatcatgg
     2701 tcaacaatgc gtagctggcg atgttgaacg gtacgccaag gaaaatatcg gcgctgcgtt
     2761 ggtaaagctg gcaggacagt ttgccgtcgg caacgtaaaa ctgaaacagc gcgtggcaag
     2821 gcggcaatgc catttcatcg accaaagccg gattccacgc cgacacaatc aggcggcgcg
     2881 aatcgggatt tttcttgatt tgttccacca cattggcgat ttgatcgata tgcctgccgt
     2941 cgggtgcggg ccagctgcgc cattggtagc cgtacaccgg gcccaaatcg ccgttttcgt
     3001 ccgcccactc gtcccaaatg gaaacattgt tgtcctttag gtatttgata ttggtatcgc
     3061 ctttgagaaa ccaaagcagc tcgtggataa tcgagcgcaa atgcagcttt ttggtcgtca
     3121 gcagcggaaa acctttgccc aagtcaaaac gcatctgata accgaatacg gagcgcgtac
     3181 ccgtaccggt gcggtctgat ttgtccgtac cgttgtcgag gacgtggcgc atcaagtcca
     3241 aataggcctt catcatcatc tttcatcaaa ttaaacggcg catattgtaa catttccggc
     3301 caaagcccga gtccggacaa acgcacacgc cgcccccccg gacgataaaa cgcagatacg
     3361 ggcaggcagg attgttggca atttcagtcc ttttccacag taaaacccgg tgggaaaaca
     3421 aaattacctt gattggaatc aaaaaatcta gtttaattac ttagaataaa atttcaataa
     3481 tatttttatt tacgaaatta atttatgatt attgattgat tatcggcaac aaacatcaaa
     3541 catcgaaaat atggaaaaaa taatgtcaac aatttttgcc aaatcgggct tggcatcaga
     3601 aaaaaatagg tttatattcc cacctacaaa tttgttttcc cattagtaca ctatcaacca
     3661 aaaggagtat ccgaatgact gacctgaaca ccctttttgc caacctcaaa caacgcaatc
     3721 ccaatcagga gccgttccat caggcggttg aagaagtctt catgagtctc gatccgtttt
     3781 tggcaaaaaa tccgaaatac acccagcaaa gcctgctgga acgcatcgtc gaacccgaac
     3841 gcgtcgtcat gttccgcgta acctggcagg acgataaagg gcaagtccaa gtcaaccggg
     3901 gctaccgcgt gcaaatgagt tccgccatcg gtccttacaa aggcggcctg cgcttccatc
     3961 cgaccgtcga tttaggcgta ttgaaattcc tcgcttttga acaagtgttc aaaaacgcct
     4021 tgaccaccct gcctatgggc ggcggcaaag gcggttccga cttcgacccc aaaggcaaat
     4081 ccgatgccga agtaatgcgc ttctgccaag cctttatgac cgaactctac cgccacatcg
     4141 gcgcggacac cgatgttccg gccggcgaca tcggtgtagg cgggcgcgaa atcggctacc
     4201 tgttcggaca atacaaaaaa atccgcaacg agttttcttc cgtcctgacc ggcaaaggtt
     4261 tggaatgggg cggcagcctc atccgtcccg aagcgaccgg ctacggctgc gtctatttcg
     4321 cccaagcgat gctgcaaacc cgcaacgata gttttgaagg caaacgcgtc ctgatttccg
     4381 gctccggcaa cgtggcgcaa tacgccgccg aaaaagccat ccaactgggc gcgaaagtgc
     4441 tgaccgtttc cgactccaac ggcttcgtcc tcttccccga cagcggtatg accgaagcgc
     4501 aactcgccgc cttgatcgaa ttgaaagaag tccgccgcga acgcgttgcc acctacgcca
     4561 aagagcaagg tctgcaatac tttgaaaaac aaaaaccgtg gggcgtcgcc gccgaaatcg
     4621 ccctgccctg cgcgacccag aacgaattgg acgaagaagc cgccaaaacc ctgttggcaa
     4681 acggctgcta cgtcgttgcc gaaggtgcga atatgccgtc gactttgggc gcggtcgagc
     4741 aatttatcaa agccggcatc ctctacgccc cgggaaaagc ctccaatgcc ggcggcgtag
     4801 caacttcagg tttggaaatg agccaaaacg ccatccgcct gtcttggact cgtgaagaag
     4861 tcgaccaacg cctgttcggc atcatgcaaa gcatccacga atcctgtctg aaatacggca
     4921 aagtcggcga cacagtaaac tacgtcaatg gtgcgaacat tgccggtttc gtcaaagttg
     4981 ccgatgccat gctggcgcaa ggcttctaag caaacaccgc cgctccgcaa acaaaatgcc
     5041 gtccgaaccg caaatgctgt tcagacggca tttcattatc cgcccgttcg aatcgggtga
     5101 tactatttgt atccagaatt gttggatagt ttgggagtgg agaggaagaa atgattatgg
     5161 accaatacta tatggagtta aagaataagt tatctaacag accaatccta ctggataata
     5221 ctaatgattt tctttttgtt ttagtaaata cagtgaaagc tatgatagaa aatactgata
     5281 aaagtcagct ttcagagtta gataaaattt tagacggtgt cacaagtcaa gaattgaaac
     5341 ttgcctatga tttttgtcaa gggaaattcg gtcaagcagg tttttcttat cgtaggcacc
     5401 cgaattattt ttatttgtcc agtttaattg cgacttttcc agaatttgag ttgtctaaag
     5461 cagaccgaga ttacctcaaa ggaatcataa attttgataa ctacctttta tatgagttag
     5521 attagtcttt aatcacctca aaaccctatt tattcaaaag gagaaaaaat gattgagctg
     5581 aaattagtag atgagagcag ttttcaggca gtgctggatt tgaaaatatc tgaagctgat
     5641 gaacgagcac gttttgtggc tccaaatgta cgctctttag ctgacgcatg gctctaccgg
     5701 gaaaatgaag atgtgtttcc gagggcaatc tattgggata agcaagtggt tggctttctc
     5761 ctgctggaaa tagacaagga tgaagcagaa tactttatct ggcggataat gattggtcag
//
LOCUS       DAXHRP010000128         5791 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.128, whole genome shotgun sequence.
ACCESSION   DAXHRP010000128 DAXHRP010000000
VERSION     DAXHRP010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.128"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            132..566
                     /locus_tag="ACFM72_001679"
     CDS             132..566
                     /locus_tag="ACFM72_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HFC6258223.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(579..1442)
                     /locus_tag="ACFM72_001680"
     CDS             complement(579..1442)
                     /locus_tag="ACFM72_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC6258224.1"
                     /translation="MELDEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLARLAGVGRQTELLVRNTEQFIAGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYLDENAGTTGVRGEIHQKEAVEEKVSLSDRF
                     GLWLSFYPFDQNDYLSAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(1450..2067)
                     /locus_tag="ACFM72_001681"
     CDS             complement(1450..2067)
                     /locus_tag="ACFM72_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HFC6258225.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGYNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDSRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(2230..2844)
                     /locus_tag="ACFM72_001682"
     CDS             complement(2230..2844)
                     /locus_tag="ACFM72_001682"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HFC6258226.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPDDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQTDLQEG"
     gene            3050..4822
                     /locus_tag="ACFM72_001683"
     CDS             3050..4822
                     /locus_tag="ACFM72_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HFC6258227.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQPQQGTTVSLTGASEESLK"
     gene            4819..5475
                     /locus_tag="ACFM72_001684"
     CDS             4819..5475
                     /locus_tag="ACFM72_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC6258228.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQSTQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVLE
                     "
BASE COUNT         1424 a         1632 c         1344 g         1391 t
ORIGIN      
        1 gttccgattc cgccgttatg tctgcctgcc ggacatacgt acgcattatt aacaaaagtt
       61 aaccgcgata ataccatctt tcacacgtca atctagtata tttcctaaaa tttccaacaa
      121 gaggaaaagc cgtgccactg cctgctccct gccgttttgc caaacctgcc gcctcttttt
      181 taagtatggc tttgctttcc tgtcagcttt cccacgccgc cacggcttat atccccccga
      241 acgattttca accgaactgc gacatacgcc gactcgggct gacccaaagt cagcacaatg
      301 agctgcgtaa aatccgcacc gccttcaaaa tggcgggcga cagggcgcgt ttgaaggtta
      361 tgcattccga acacagccgc cgccggtctg tcgtcgaaat catttcctcg gatgttttta
      421 atcggaacga ggcgcgcgat tatgtcgaaa gccgctattt gtccggtatg gattttgcgg
      481 tggacgaatt ggaaatccaa caccggttct tccatatcct cacaccgcaa cagcagcaaa
      541 tgtggctttc ttcctgcctc aaataatccc cgaaacgctc acaacgcccg ttgtttcggc
      601 agcctgcccg cccagtcgca ggcaaactgc cacgcggaac gtcccgaacg gctgccccgc
      661 gtctgcgccc actgcaatgc cgccatctgt gcggtttcat catacggcac gccgaaatct
      721 tccagccaat tttgcactgc cgacagataa tcgttttgat cgaacggata aaagctgagc
      781 cacaatccga aacggtcgga caaagatact ttttcttcca ccgcttcttt ctgatggatt
      841 tctccgcgca cgcctgtcgt acctgcattt tcatccaaat attcgggcat caggtgccgt
      901 ctgttggaag tcgcgtacac cagcacgttg gcgcaacgtt gggacagacc gccgtccaat
      961 gccgttttca atgccttata ggtttcgtcg ccgctttcaa atgacaaatc gtcgcaaaat
     1021 acaatgaatt tttccggacg ttccttcaaa agcgtcaaca gatacggcag gccgatcaaa
     1081 tcgcttttat cgacttcgat caggcgcaat cccttatccg catattcgtg cagcagggct
     1141 ttgaccagcg aggatttgcc tgttccgcgc gcgccgctca tcaatacgtt attcgcgggt
     1201 ctgccggcaa tgaattgttc ggtattacgc accagcaatt cggtttgcct gccaactccc
     1261 gccagccttg ccaaggggaa ggtgtgcgga tcgggcaagt gttccaaaaa accttttttg
     1321 cccgcactct gccagcggaa ggcaagcgcg ttccaatccg tatgcccggg ttcgggcgga
     1381 agcacggcat ccaaacgccg caaaacggca taggctttat cgagaaattc gtccaattcc
     1441 atctctacct cactttgcat atctttgcgc catcagccgt tcgacggtat cgacgattgc
     1501 ctgcgtattc ggatcgattt cgatgttgat tctgtcgccg acctttctgc tgccgaacag
     1561 cgtccgttcc aaagtttcgg gaatcaaatg gacattgaaa cggctgtctt cgactttgcc
     1621 tatggtcagg ctgcaaccgt ccaagccgac gaaccctttg gtcaggatat agggtttgag
     1681 ttcgtgcggg agcgaaaacc aaaccgtgcg gttgtacccg tcccgttcga tttcgacaat
     1741 aggcacggtt gccataatgt gtccgctcat gacgtgtccg ccgatttcgt ctccgaaacg
     1801 cgccgcccgt tcgatgttga cgcaatcgcc ttccttcagc agccctaaat tggtttttgc
     1861 caaagtttcc gccattaaat cgaaactgac gcggtttcct tcgatttcgg taatcgtcag
     1921 gcagcagccg ttgttggcga ccgatgcgcc gcgttgcaga ttgtccgccg cctcttgcgg
     1981 aagctcgacg acataagtct gaaatgcctc cgacgggcgg tggattgccg tcagttttcc
     2041 caagccttga acaatgcctg taaacataat cctgtttccc tgtgtcggta aaaatggtgc
     2101 aaattgtagc atctccccgc gaaaaatgcc gtctgaaatg ccttcagaca gcattatgcc
     2161 tccgattcgg gcaaaaaccg cccggtacgg cttgaccttt cctttccacg ccggtcggcg
     2221 gtcttgccct tatccctcct gcaaatcggt ttgcgtgttc aagtcggcaa aatgcccgtc
     2281 aaactcgaat ctgaccgacc gcgccctttg ctgctgcaac cagcttctta atgttttcat
     2341 acccgaaaac agatagggaa tcgcgctttg cagaatctgc gggcggatat acataatgtt
     2401 gtagtgcatc gttatcggcg tttccacata atacgcattg cacaacggtg tgcgtttcga
     2461 cacggtttca aaccttgcca ccaaatcgtc cggcagatac ggcatatcgc acggcacaac
     2521 caaaagccag tcggcagtcg ccaactgcaa atcgttggct gcggtacaca atgccgaaag
     2581 cgggccgaaa tgctgccact gccgtgcgtc cggaaaaata tgcggacttc ttcgagcata
     2641 ttcttccaaa ttccggttgg tgctgatggc gatatggctg acctgcggcc tgaccctgtc
     2701 gatgacatga tctatcagtg ccttaccccc caaaagagca agccccttgt cctcgcctcc
     2761 catacggctc gcctgaccgt cggccagtat cagggcaaaa gttttcattg cggatgttct
     2821 cttggaaaag ttcgaggttt tcatgattgc agtctgccgt tcccaatgac tcaaaatgcc
     2881 gtctgaagca gacggcaaat aaattcatat tatctgaatt ttatcataac atgatttaac
     2941 actgaagcgg tacggattat gttttcctta accaattctt tctgagcagt tgtatctaat
     3001 cccaaagaat gatattgttt gcattattta gaacaatttt tcgccgagca tgatactgcc
     3061 agcccgtttt tcagacggca tcagcctttc cctacgcctg aaactcctga ccggagtgtg
     3121 ggtcgggttg gcggcattgt ctgtcgtttt gacactgctg ctctctttgc gtctggaaaa
     3181 cgcggcctcc gtcatcgaag aggcgggcaa cttgagaatg caggcatacc gtctggcata
     3241 catggcgggt gaaggatctc cccgctccca aatagacaat caggttgacg aatttgaaaa
     3301 aagcctgaat cgtatttcac aaagtgatgc catccatccg ctgattcctt cggacacccc
     3361 tcttgcttat gatttgatac aatccatgct gattatagat tggcaggcac acatcctccc
     3421 cccgctccag tcctaccggc gaccgactca ggtcgatctc taccgctttg ccggaaacat
     3481 cgaactgttt ttgcaggcat tggaaaatgc caacgaaaaa aacacatggt ggctcaggcg
     3541 ttttcaatgg gcaattatgt tgatgacgct ggtgtcgtct gtactgatgc tgttttggca
     3601 ccagatttgg gttatccggc cgctgcaggc gttaagggaa ggtgcggaac gcatcggacg
     3661 gaggtgtttc gatattccgg ttcccgaagg cggtacgccg gaattcaaac aggtcgggcg
     3721 ttgtttcaat caaatgggcg gcaggttgaa aattttatat gatgatttgg aaggacaagt
     3781 cgccgagcag acacgcagtc tcgaaaaaca aaatcaaaac ctgaccctgc tgtaccaaac
     3841 tacacgggac ctgcaccaat cctacatacc gcaacaggct gcagaacatt ttctaaaccg
     3901 tatcctgccc gccgtaggag cagattccgg cagagtttgt ttggacggcg gatccgatgt
     3961 ttatgtttcc attcatcatg cggattgcgg cacagcagct tcggatttgg ggaagtacca
     4021 tgaggaaatc ttccccattg agtaccagaa cgaaacattg ggcaggctgt tgctcagctt
     4081 tccaaacggc atttctcttg atgaagacga ccgcatcctg cttcaaacac taggcaggca
     4141 attgggcgta tcgcttgccg gcgcaaaaca ggaggaagaa aaacgcctgc ttgcagtatt
     4201 gcaggaacgc aacctgattg cgcaaggatt acatgacagc atcgcacaag cattaacgtt
     4261 cctaaaccta caggtacaga tgctggaaac cgcctttgcc gaaaacaaac gggaggaagc
     4321 cgcagaaaac atcggcttca tcaaaacagg cgtgcaggaa tgttatgaag atgtccgcga
     4381 actgctgctc aacttccgta ccaaaatcag caataaagaa tttcccgaag ccgttgccga
     4441 cctattcgcc cgctttacgc aacaaaccgg gataacggtc gaaaccgcct gggaaaacgg
     4501 ttcgttcctg ccgcctcagg aagcgcagct ccaaatgatt tttatcctgc aggaaagcct
     4561 gtccaacatc cgcaaacacg cccgcgccac ccatgtaaaa ttcacccttt ccgaacacgg
     4621 cggacgcttt accatgacca tccaagacaa cggacaaggt ttcgacacgg agaaaatagg
     4681 agaacctacg ggcagccatg tcggactgca catcatgcag gagcgtgcca agcgcatcca
     4741 tgccgtttta gaaatccgtt cccaacccca acagggaacc accgtctcat tgacgggtgc
     4801 atctgaagaa agcttgaaat gaccattaaa attattctga tagacgacca caccctcttc
     4861 cgcagcggca ttaaagccct tttgtcgcgc caacacggtt ttgaagtcat cggcgaagcc
     4921 gcagacggcc tctcgggcat caaaatgatt agtcggctgc aacccgatgt cgtcctgctc
     4981 gatttggata tgcccggcat gaacggacgc gaagcactct cccaaatcat cagcatcaat
     5041 ccgcagcagg cagtgattat gctgaccgtt tccgaagaca gcgacgactt gaccgaatgt
     5101 attcgcatcg gcgcgcgcgg ttacctgctg aaaaacatca acgctgactt tctgctcgaa
     5161 agcatacgca aagccgccga aggcgataat gtattctcgc ccgagatgac cgccaaactc
     5221 gttaaaagcc tgatttctcc ccagtccaca caagggacgc aggcactctc ctcacttacc
     5281 cctcgtgaac tggaaatctt gggctatctc gccgcaggac acagcaacaa aatcatcgcc
     5341 cgccacctcg atcttgccga atccaccgtc aaagtccacg ttcaaaacct gctccgcaaa
     5401 ctcaacctca gcagccgggt gcaggccgcc gtttacgcca tccggcacaa cgtcccccaa
     5461 cccgtgctgg aataaggcgg gttcagacgg catattaggg gttttaatcc ccgtacggtc
     5521 attcggataa cagaccacgc atgtaagctt atgcccccat aagtacgctt ggcatagcag
     5581 taatattgtt cggtttagtg ttttccgttt gcccctatct gatactgcaa tatcagctat
     5641 gccgtctgaa aacgcatcat catgatattt tcagacggca taataaaaag cggaaatact
     5701 aatgcagggt aaaatgttcc attccgaatc ccataaatat acaatggctt atatcgttta
     5761 agcatgtgta acccaccctc atatcaatca a
//
LOCUS       DAXHRP010000129         5773 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.129, whole genome shotgun sequence.
ACCESSION   DAXHRP010000129 DAXHRP010000000
VERSION     DAXHRP010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5773
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.129"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            853..2061
                     /locus_tag="ACFM72_001685"
     CDS             853..2061
                     /locus_tag="ACFM72_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC6258229.1"
                     /translation="MSEAEYFSHFISNGNGKLLEIPQRRGRQDGVFIDWLSFTLHEDS
                     LLKVSGCPLVSDAEYMFVLSKKLEEILGFGITSRCKSKGNKFYDSMFRLGSEEVDYGE
                     VHYGGQRNTVLVELKGTGCNIANPGWELRLKQFLEDSLRPRITRVDLALDFFDGEYTP
                     EQALLDHDNGFFDNSNMRPKSEMVGTAWRREDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNHGDMEIPLDILINQGSYFSGAFPICQKFKNMPNPERFDYRKKV
                     ANLTFQHKLRYAKNAVGKLINFMFDMGFDSDEIVRYLKADLGYPKGLEPEKYSLAGLK
                     ESLKFGFIHEQPDVDLEVELEELGIIKFKQSDKFDPDKRLFDPHHDVESERQYQLYLD
                     RMYDLHANQN"
     gene            2082..2393
                     /locus_tag="ACFM72_001686"
     CDS             2082..2393
                     /locus_tag="ACFM72_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258230.1"
                     /translation="MFNQTQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSKNFSKLENLKYPCEVMVTVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            2397..2597
                     /locus_tag="ACFM72_001687"
     CDS             2397..2597
                     /locus_tag="ACFM72_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258231.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEIGGGFQIFQFFVKSE"
     gene            2824..3054
                     /locus_tag="ACFM72_001688"
     CDS             2824..3054
                     /locus_tag="ACFM72_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258232.1"
                     /translation="MNIVKKYAVKAALAAGIFTPAIVMADTFDASAIGTQVANVIMGF
                     VSMVSAVGMAAITVILAIQGFKMAWSMIKSVR"
     gene            3082..3381
                     /locus_tag="ACFM72_001689"
     CDS             3082..3381
                     /locus_tag="ACFM72_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258233.1"
                     /translation="MGYRVGINCFDTRLQADDYLLSSLPPTVTQDGKIIRPERVGDKW
                     ILNGKPVTLSYPKCSNYEQVKSGAYLGSMVLILFVVIYGFRLLINFLKDIGKVGA"
     gene            3500..3814
                     /locus_tag="ACFM72_001690"
     CDS             3500..3814
                     /locus_tag="ACFM72_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC6258234.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYYGKTMAYTFASELLDYSKVNKF
                     IIHEEIQCFLNKRISNNIWKIYFSDESVAYIKILELQDDYSRGIEIKTFDFNPNVGDV
                     FG"
     gene            3792..5327
                     /locus_tag="ACFM72_001691"
     CDS             3792..5327
                     /locus_tag="ACFM72_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC6258235.1"
                     /translation="MLGMFSVNSYAERFKYPIGNSDVRLDIDHKKSVVTDFRVDGQRF
                     SGRIIEPSIIEHVPTGARSLEKVPVKVTSSVSRAGVLAGVGKLARLGAKLSTRAVPYV
                     GTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDERRINRTYGCYGV
                     DSSIMRLMSDYSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRCTF
                     DWNGGDCVVNKGDDYRNGANFSLSRNPKYKEEMDAKKLEEILSLKVDANPDKYIKATG
                     YPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPG
                     SAEAPNAQPLPEVSPAENPANNPNPNENPGTSPNPEPDPDLNPDANPDTDGQPGTRPD
                     SPAVPGRTNGRDGEDGGLLCKFFPDILACDRLPEPNPAEDLNLPSETVNVEFQKSGIF
                     QDSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYMLLALAWAVAAFFCIRTVS
                     REV"
     gene            5631..>5773
                     /locus_tag="ACFM72_001692"
     CDS             5631..>5773
                     /locus_tag="ACFM72_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 family protein"
                     /protein_id="HFC6258236.1"
                     /translation="MKLLAALIPLLMSVAGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     SSIT"
BASE COUNT         1679 a         1140 c         1362 g         1592 t
ORIGIN      
        1 aatttcggcg agccgtaggg tgggctgtag ggtgggcttc agcccaccaa tttcaccgca
       61 tcaaaggttt ttgggaatac ggcggtttcg gttttcggtg ggaatgggcg gaatggataa
      121 cattgacgga gttgggggaa taggtggaaa cggtgggatt ggtgggctga agcccaccct
      181 acagccagcc ctatgtccac gctgcacatc ctacgcccgc cttgcgtttc ttataagcag
      241 cattttacgc aatactttgc gtccgctgaa aaaatttcaa acggtctttt ttatcaaatg
      301 cgaaaaatat aacgtcattc ccgcgcaggc gggaatctag tctgtcggtg cggaaactta
      361 tcggataaaa cggtttcttt agattttacg ccctagattc ccgccttata tgatgcgctc
      421 tatcaaaggg gcgcattact tttcttaaca ttcccctttg acagccaagt gaaaggggct
      481 tttttatgtc agtagcaaat gtaatatttt cttgttccta ttggagaata tttaaaaaat
      541 cagattattg cgttttatgt ttctatcagt tcaggcatgg tgaaccgcat aaactcgctg
      601 aacaagaaaa tttttcaaag ctttatcagg cgttcgatta tatagattcg gttggctcga
      661 attttccggt aattatcaca acagacggtt gtggtctttc ttcttgatct ttaacagttt
      721 gtcaggattg ggctttcggt cgttgaccgt tggacgcgct ttagcgcggc agacgggaaa
      781 cggctgaaag ccccccccct gactaacagg gggggagcga aataaaacaa atccctaaag
      841 gtactgaaca aaatgagtga agcagaatat ttttcacatt tcatatctaa cggcaatggg
      901 aagttattag aaattccgca acgtaggggc aggcaggacg gcgtttttat agattggttg
      961 tcattcacac tgcacgaaga ttccttgctg aaagtttccg gatgcccatt agtttccgat
     1021 gccgaatata tgtttgtttt aagcaaaaaa ttggaggaaa tattagggtt tggcatcacg
     1081 agcagatgca aatcgaaggg caataaattt tacgattcga tgtttaggtt gggatcggaa
     1141 gaagttgact acggcgaagt ccattacgga ggtcagcgca atactgtttt agttgagttg
     1201 aaaggtactg gttgcaacat tgcaaatcca ggttgggaat tgaggcttaa gcagtttttg
     1261 gaagattcat tgaggccgag gataacgcgg gtagatttgg cacttgattt ttttgatggg
     1321 gagtacacgc cggaacaggc acttttggat cacgataacg gttttttcga taacagtaac
     1381 atgaggccga aatctgaaat ggttggaacg gcttggcgga gagaggacgg gagcggcaag
     1441 acattttatg taggtcgcaa gaaaaattct cgttttgtgc gtgtttatga gaaaggcagg
     1501 cagctaggcg ataaagaaag caagtgggta aggttcgaaa ttcagtttaa tcatggagat
     1561 atggaaatac ctttggatat tctgataaat caaggttctt acttttcagg cgctttcccg
     1621 atttgtcaga aatttaaaaa tatgccgaat ccggaaaggt tcgattaccg taaaaaagtg
     1681 gctaatttaa cttttcagca taaattgaga tacgcaaaaa acgcggtcgg caaactgatt
     1741 aatttcatgt ttgatatggg ttttgatagt gatgaaattg tcagatatct gaaggcagat
     1801 ttggggtatc ccaaagggct agaacctgaa aaatattcgt tggccggatt gaaggaatct
     1861 ttgaaattcg gctttatcca cgaacaaccg gatgtagatt tagaggttga attggaagaa
     1921 ctcggaatta tcaaatttaa gcaatcagat aaattcgatc cggataaaag gcttttcgat
     1981 ccacatcacg atgtagaaag tgagaggcaa tatcagcttt atctcgacag aatgtatgat
     2041 cttcatgcaa atcaaaatta acctaaaaag gaaaaattaa tatgtttaat caaactcaaa
     2101 ctgtaactta tcccgcaact tttttaggag ctaaaaaatt caaaggcgaa attgatggct
     2161 ctaatatcga cacttgttcc gtattggttg caacaccttt gccggcacag tcgggaaatg
     2221 ctgttggatt cacggcagca caaatgaagt tcggggacag taagaatttc tcaaaattag
     2281 agaatctcaa atacccgtgc gaagttatgg taacggttga aatgacttcg acaggtaagg
     2341 gcatggttcc ttcattaatt gattttcagg tggcagaaaa gccgaaaggt tgatttatga
     2401 aatttgaaga acgtttcata gttcaagatt tagaaacgca tgactttatt tatcccgatc
     2461 ctttcggtga tgtggggttt actcaaaata ttaaatcagc aggtcaattt gaaagctacg
     2521 aagatgcgtt gaattcaggc ataaatgaaa taggcggagg attccagata tttcagttct
     2581 tcgtaaaatc ggaataaaag aaaaacaggc tcggcgggcg gtctgtcaac ctttcacaaa
     2641 gcccgcaaaa aggattaaaa atgaataaag caactttaat tatcggattt tttgtttgcc
     2701 tcattctttt cattttctca attctctatt tcataaatta aaaacaaaat tcgggagcag
     2761 gcttcgcccg gatttaaacc taagaagccg tattacttta aatatcaaaa aaggaaaaaa
     2821 acgatgaaca tcgttaaaaa atacgctgta aaagcagcct tggcagccgg tatcttcaca
     2881 ccggccattg ttatggcaga tacctttgat gcatccgcga ttggtacgca agtagcgaat
     2941 gtaatcatgg gtttcgtgtc aatggtttcc gccgtgggta tggcggccat taccgtgatt
     3001 cttgcaatcc aaggcttcaa aatggcttgg agcatgatta aatctgtcag ataaacagag
     3061 tgaagaaaaa ggggcgtata aatgggctat cgtgtcggca taaattgttt tgatacaaga
     3121 ttgcaggcag acgactattt attgtcgtcc cttcctccta ctgttaccca ggacggaaaa
     3181 atcatcaggc cggaaagggt gggcgataaa tggattttga acggaaagcc ggtcacgctg
     3241 tcttatccga aatgttcgaa ttacgaacaa gttaaatccg gagcttatct cgggtctatg
     3301 gttttaattc tgtttgtcgt tatttacggc ttcaggctgc tgattaattt cttaaaagac
     3361 ataggcaaag taggggcgtg atgatgtttg tcgatttttg gtttttgctc ggatttttcc
     3421 tagctttgtc tgtcgctttg atatttatat gacgtgtttt aaaatcaggc tttcaaaaca
     3481 acctttgaaa gacagaaaca tgaacaagcc gtttatcacg caggcgcagt tggcacttta
     3541 taaatatcag ccgtcaagca agtattatgg taaaacaatg gcatatactt tcgctagtga
     3601 gcttttggat tattcaaaag ttaataaatt tataattcat gaagaaatcc aatgtttttt
     3661 aaataaaagg atttctaata atatttggaa aatttatttt tctgatgagt ctgttgcgta
     3721 tataaaaatt ttagaattac aggatgatta tagtcgtgga attgaaatta aaacgtttga
     3781 ttttaatcct aatgttgggg atgttttcgg ttaattctta tgctgaacgt tttaagtatc
     3841 ctattggaaa ttcagatgtt agattggata ttgatcataa aaaatctgta gttaccgatt
     3901 ttcgtgttga tggtcagcgt ttttcaggtc gaattatcga accttcaata atagaacacg
     3961 tgccaacagg cgcacgctct cttgaaaaag tccccgttaa agtaacttca tcagtttccc
     4021 gcgccggagt cttggcagga gtcggcaaac ttgcccgctt aggcgcgaaa ttaagcacaa
     4081 gggcggttcc ctatgtcgga acagcccttt tagcccacga cgtatacgaa actttcaaag
     4141 aagacataca ggcacaaggc taccaatacg accccgaaac cgacaaattt gtaaaaggct
     4201 acgaatatag taattgcctt tggtacgaag acgaaagacg tattaataga acctatggct
     4261 gctacggcgt tgacagttcg attatgcgcc ttatgtccga ttacagcaga ttccccgaag
     4321 tcaaagaatt gatggaaagc caaatgtata ggctggcacg tccgttttgg aattggcata
     4381 aagaagaact gaataaatta agttctttgg attggaataa ttttgtttta aatcgttgca
     4441 catttgattg gaacggcgga gattgtgtgg tcaataaagg tgatgattac agaaatgggg
     4501 ctaatttttc ccttagccgc aatccgaaat acaaagaaga aatggatgcc aaaaagctgg
     4561 aagagatttt atcgttgaaa gtcgatgcca atcccgacaa atacataaag gcaaccggat
     4621 atcccggtta ttccgaaaaa gtagaagtag cacccggaac aaaagtgaat atggggcctg
     4681 ttacggacag gaacgggaat cccgttcagg ttgtcgcaac attcggcagg gattcgcaag
     4741 gcaacaccac agtggatgtt caagtaatcc cgcgtcccga cctcacaccc ggaagcgcgg
     4801 aagcaccgaa cgcacagccg ctgcccgaag tatcgcccgc cgaaaacccc gcaaacaacc
     4861 cgaaccccaa tgagaacccc ggcacgagcc ccaatcccga acccgacccc gatttgaatc
     4921 ccgatgcaaa tcccgatacg gacggacagc ccggcacaag acccgattcc cccgcagttc
     4981 cgggccgcac aaacggcagg gacggcgaag acggcggcct tttgtgcaaa ttcttccccg
     5041 acattctcgc ttgcgacagg ctgcccgagc ccaatccggc agaagattta aatctgccgt
     5101 ctgaaaccgt caatgtagag tttcagaaat caggaatctt tcaagattcc gcacagtgtc
     5161 ccgcacctgt cactttcaca gtgactgtgc ttgattccag caggcagttc gcgttcagct
     5221 ttgagaacgc atgtaccata gccgaacggc taaggtacat gcttctcgcc cttgcttggg
     5281 cggttgccgc ctttttctgt atccgcacag tatcccgtga agtctagcag gcgcagcacc
     5341 gccgggcttc agtaacttgt accaaggcag gaggaggacg tccagaaaga tttgtaaaga
     5401 cggctttatc gtctttataa atctttttgg ataccccttg ccgccccgcc aaaagaatac
     5461 actctgccgc aagggcaggt ggtaaggcgc gcgctttttg cgccgttccc cctgcccccg
     5521 cggcgtcgca agtgagactg tgggtgtggg ggctagtccc cgcaaaatct ttcagattaa
     5581 gaaacatttt tttaatgagg caaccgtgcc ttttaagaaa gggatagcaa atgaaattgt
     5641 tggccgcatt gattccgctg ttgatgagcg tcgcaggccg tatattgact gcattaggct
     5701 tgatggctgt tacttattcg ggtgtagata gattggtagc ccattttcag caggcgataa
     5761 ccagtagcat aac
//
LOCUS       DAXHRP010000130         5753 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.130, whole genome shotgun sequence.
ACCESSION   DAXHRP010000130 DAXHRP010000000
VERSION     DAXHRP010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5753
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.130"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(199..1242)
                     /gene="argC"
                     /locus_tag="ACFM72_001693"
     CDS             complement(199..1242)
                     /gene="argC"
                     /locus_tag="ACFM72_001693"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HFC6258237.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSNGICPETVLRDYYRDSLFVDI
                     LPTGSAPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     EETHGLDAIPLLP"
     gene            complement(1239..1532)
                     /locus_tag="ACFM72_001694"
     CDS             complement(1239..1532)
                     /locus_tag="ACFM72_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258238.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPADFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQAVGQRSDGIPANHTKEKP"
     gene            1900..3054
                     /locus_tag="ACFM72_001695"
     CDS             1900..3054
                     /locus_tag="ACFM72_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC6258239.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAARNLEAASWKDINEI
                     YQRADPTAPLFYLRKKGAIVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHISRQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATLLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            3063..3290
                     /locus_tag="ACFM72_001696"
     CDS             3063..3290
                     /locus_tag="ACFM72_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258240.1"
                     /translation="MKNWKQFTFFVILVIACYQVLYFLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQEKEYKND"
     gene            3283..3636
                     /locus_tag="ACFM72_001697"
     CDS             3283..3636
                     /locus_tag="ACFM72_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258241.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRDWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3697..4323
                     /locus_tag="ACFM72_001698"
     CDS             3697..4323
                     /locus_tag="ACFM72_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HFC6258242.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTAEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHGNETRSLKATVERLENQKLH
                     ISQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
     gene            4227..4475
                     /locus_tag="ACFM72_001699"
                     /pseudo
     CDS             4227..4475
                     /locus_tag="ACFM72_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFP transporter"
     gene            4785..5087
                     /locus_tag="ACFM72_001700"
     CDS             4785..5087
                     /locus_tag="ACFM72_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258243.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            5371..5523
                     /locus_tag="ACFM72_001701"
                     /pseudo
     CDS             5371..5523
                     /locus_tag="ACFM72_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117473.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
BASE COUNT         1554 a         1253 c         1417 g         1529 t
ORIGIN      
        1 aatcgaagcg tgtggaaatg tgtcggaaat tgctgaagct ggataaacta gattcccgct
       61 tttgcgggaa tgacggtatt ttagattttt gttttcgtgt gaatggatgg gtcaaaagcc
      121 gtccgaaccc aaaaaaacgt cgctttcaga cggcatcaaa aaccgcaggc acgatgcctg
      181 cggtttgctg tttgcgcttc aggggagcag ggggattgcg tccaagccgt gtgtttcctc
      241 cagtccgaac ataatgttca tattttggac tgcctgaccc gccgcgcctt tgacgaggtt
      301 gtcgatgacg gaaaggacga cccacacatc ggattgcgcc gcctgttgga tgctgatgcg
      361 gcagaggttt gcgccgcgca cgctgcgggt ttcgggggcg gaaccggtcg gcaggatgtc
      421 cacgaacagg ctgtcgcggt aatagtcgcg caggacggtt tcggggcaga tgccgtttga
      481 aaggtggagg taaacggtgg cgtgcatacc gcgtatcatc ggcgcgaggt gcggcgtgaa
      541 cacgaatcct tcggcgatgc cgtcctgaag cccggcgatg gtctgcctga tttcgggcag
      601 gtggcggtgt ccagctatgc cgtaggcttt gaagttgtcg ccggcttcgc acaacagcga
      661 accgacattg cctttcctgc ccgcgccgga cacgccggat ttgcagtcgg caatcagcgg
      721 cataccgggc ttcagacggc attgccgcaa cagcggcacg agcggcaggg atacgcaggt
      781 cgggtagcag ccggggttgg cgacgaggcg tgcctgtgcg acggcttcgc ggttgagttc
      841 gctcaatccg tacacggctt gggaaacgag gtcgggggcg gcgtgggtca tgccgtacca
      901 gtgttcccag gtcggaatgt cccgtatgcg gaagtcggcg gaaaggtcga tgacgcgcac
      961 gccctgttca atcaggcgcg gcgcgtcttt catggcgatg ccgttgggcg tggcgaagaa
     1021 gacgatgtcg cattgttcca aacctgcctc gtcgggcgtt tggaaggcga ggccgtacac
     1081 gccgcgcaga cttggaaagt aatcggcaac tgcagttccc gcttcgctgc ggctggttac
     1141 ggcggcgact tcgacatcgg gatgggcggc aagcaggcgc agcagttcca cgcccgtgta
     1201 gcccgtcgcg ccgacaatgc cgactttgat ttttttactc atggtttttc ctttgtgtgg
     1261 ttggcgggta tgccgtccga acgctgtccg acggcttgtc cgacggggtt ttgattggcg
     1321 gcggaaggac ggtacacaaa gcgtttgaaa agcgtgtcta atttaatggc atccgcctct
     1381 gtttttaaaa cccagccctg ccgtccggaa taaacataac cgtaggcgcg aaagtcggca
     1441 ggatatttcg gtgcctgccc caaacccaaa ccgtatgcgg cgaaagcggt ggtcgtggag
     1501 aaggaaagca ggaggaggac gagggttttc ataaggttcc aaaccgaacg gggcgatgaa
     1561 gcccgattat agcaaaaggt cgtctgaaaa ccgttttcag acgacctttt atttaattac
     1621 aataaaaatg ttaacaacaa aaaacaaacc gctttttttc gtttggaaac aaaacaaatt
     1681 tttatagtgg attaaattta aaccagtaca gcgttgcctc gccttgcctt gccgtactat
     1741 ctgtactgtc tgcggtttcg tcgccttttc ctgatttttg ttaatccact ataactaaaa
     1801 ttgtcaacaa ttccttgacg cacacacaaa aaaaacttta atatttgtaa atatatgtaa
     1861 cattataaat tttaaatatt ttctgagtaa ggggaagtaa tgagcatcca tctcgacttc
     1921 ggcattagtc ctaaaacgtt ccgacagact tatctgtatc aaaagcccaa gctctttaaa
     1981 ggagcggctc ggaatctcga agccgcatct tggaaagata tcaacgagat ataccaacga
     2041 gcagacccaa ccgcaccgct gttttatctg cgtaaaaaag gtgcaattgt tcctaaagaa
     2101 gaatacgtcg aaagtttcga cgctttgggc aaaactcgct accgttttat taaatccgtt
     2161 atctacgaac atatgaagaa tggtgcgtcg ttagtctata accatattaa caacgagccg
     2221 ttttcagatc atatttcccg tcaagtcgcc cgctttgctg gcgcacatac tattgtcagt
     2281 ggatatcttg cttttggcag cgacgaatct tataaaaacc attgggacac ccgcgatgtg
     2341 tatgccatcc agcttttcgg caagaaacgt tggcaactta ctgcccctga tttccctatg
     2401 ccattgtata tgcaacagac taaagatact gatatttcca ttcctgaaca tatcgatatg
     2461 gatattatcc ttgaagcagg tgatgtcctc tacatcccac gcggttggtg gcacagacct
     2521 atcccgctcg gctgtgaaac cttccacttc gctgtcggta cctttccacc caacggctat
     2581 aattacctcg agtggctaat gaagaaattt cccaccatag aaagtctgcg ccacagtttc
     2641 tcagactggg agcaagatag gacgcgtatc aacgatactg ccgcacaaat tgctgccatg
     2701 attgccgacc ccgtcaatta tgaagccttc agtgaagact ttctcggcaa agaacgtacc
     2761 gataccgctt ttcatctcga acagttcgcg aatcccaacg ctactctgct ttcagacgac
     2821 gtcaggttga gactaaatgc caataatttg gatacgttgg aaaaggggta tttgattggg
     2881 aatgggatga agataagcgt agatgaattg gggaaaaaag ttttagaaca catcggtaag
     2941 aatgaaccgt tattgttgaa aaatctactg gttaacttca atcagggaaa atatgaagaa
     3001 gttaggaagt tgatttatca gttgatagag ttagattttc tggaaatttt gtgagggatt
     3061 ctatgaaaaa ctggaagcaa tttacatttt tcgtaatatt agtaatagct tgttatcaag
     3121 tgctatattt tttatcagat atgtttcttc tcgactacat taacaaatat agttggaatt
     3181 tgaattttat tcagggtact ttgaattttt tttcaatata tctgccatat gtttttgtta
     3241 gccgaatttt taggaatacc aaccaagaaa aggagtataa aaatgattga acttcaactt
     3301 catgaattga agctggtttc agggggaggt cctgtaacag acaatatagc tggaaatgta
     3361 gctaatgctg ccacaaccaa aggaggtccc acatgggggg atttggttgc aatacctgct
     3421 gccgcagcgg cagtttatta tctgccgaaa aatgcttacg gtgctgctgg tgcaaatggt
     3481 gtatacaatg tgactcgtga ttgggtaaat gatgccgtta atgcacctcc ttataacgga
     3541 agaccaatct ttgagattga acatggatta actgctcccg caacaaaagc agataaatca
     3601 ggaaacggct acactgacgg tacagattac tgctgatatt tctcattgtt cagacgatct
     3661 ctaggggtcg tctgaaactt tcttaacttc aattttatga atagacccaa gcaacccttc
     3721 ttccgtcccg aagtcgccgt tgcccgccaa accagcctga cgggtaaagt gattctgaca
     3781 cgaccgttgt cattttccct atggacgaca tttgcatcga tatctgcgtt attgattatc
     3841 ctgtttttga tatttggtaa ctatacgcga aagacaacag cggagggaca aattttacct
     3901 gcatcaggcg taatcagggt gtatgcaccg gatacgggga caattacagc gaaattcgtg
     3961 gaagatggag aaaaggttaa ggctggcgac aagctatttg cgctttcgac ctcacgtttc
     4021 ggcgcaggag gtagcgtgca gcagcagttg aaaacggagg cagttttgaa gaaaacgttg
     4081 gcagaacagg aactgggtcg tctgaagctg atacacggga atgaaacgcg cagccttaaa
     4141 gcaactgtcg aacgtttgga aaaccagaaa ctccatattt cgcaacagat agacggtcag
     4201 aaaaggcgca ttagacttgc ggaagatcag tggcaaaaac ggcactgggc agacaggaat
     4261 tgtcgggatt gggcatggta tcctccgatt tggcgaagag caacgaacct gtttatctcg
     4321 tgaaaataaa acccgacaaa ccaaccatca ctgcatacgg tgaggaaaaa ccgctgcaaa
     4381 tcggcatgac gttggaagca gacatcctgc acgagaaacg gcggctgtac gaatgggtat
     4441 tggagctgat ttatagtatg tcgggcaaac tgtaagactt gaggctgaaa gataaagaag
     4501 ttgtctgaaa ccttttcaga cgaccagaag acaataaaaa acacaaactt caaaactgcc
     4561 tgaaaccatc cccttttaca ggcactccgt ttgtaaaagc aaggataggg catctgccct
     4621 tttgattgtt tgattaacga tacaaggagt ttcaaaatga gagttttata gtggattaac
     4681 aaaaaccagt acagcgttgc ctcgccttgc cgtaccattt gtactgtctg cggcttcgtc
     4741 gccttgtcct gatttaaatt taatccacta tatgtgttca tgaaatgact tgggtcggag
     4801 gctcaggtaa tgcgcaacaa agctcatatt attgcgaaat ttgcgaatct gcagggctta
     4861 acgatacggg aaatcctgat aaatctttag gattgccaaa caatacgttc agtaatccgc
     4921 ctggttgggg agctacaatc ggagctttag caggtagccg catagggatg cctgaatttg
     4981 gtacgtttgc gagccatgcc attgaaaatt tcgactggtc atggtatcga cgttataggg
     5041 aaattgccga aacgattgaa cgagaatatt caggcggttt gccttaatag ttgaggaggt
     5101 catgatgttt gccaaacatt atcaattcat cgcactcggc atcatgctgc ttctttatat
     5161 gttgattctc tatacgaccg atttttccaa tctgacgtat tggatgctgt tttttatctg
     5221 ttttattaca ggaaaaatat tagctcgttt gttagagaaa agctttaaat aaaatagcag
     5281 ctagtcgcaa aaggtcgtct gaaacctttt caggcggcct ttctaaaata catccaactt
     5341 cctaatccct atttttcaaa aaggaaatct atgccccatc tgcaaaacct gtctttgggc
     5401 ttaaagaaaa agctgcctgt tatcctgcaa acagaaatat cagaatgcgg cttggcatgt
     5461 ctggcggctg tggcgggatt tcatggtttc catacggatt tacgcgcact gcgttcaaaa
     5521 tactgtccga gacctttgca aaattcccca aaatccccta aatgtcttgg tgggaatttt
     5581 ggggattttg gggaattttg caaaggtctc attctataac tgtaaatact tttaaattta
     5641 tgacagaata gtaaatattg ctaaaataat attaatgtca tgaaattttt tcctgctcca
     5701 tgtttgttgg ttatcctggc tgtcataccc cttaaaacct tagctgccga tga
//
LOCUS       DAXHRP010000131         5712 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.131, whole genome shotgun sequence.
ACCESSION   DAXHRP010000131 DAXHRP010000000
VERSION     DAXHRP010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.131"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..185
                     /locus_tag="ACFM72_001702"
     CDS             <1..185
                     /locus_tag="ACFM72_001702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258244.1"
                     /translation="NDGGRFGRCGGFGRSQPILQSTLTAFYESAAILGNAKKMPSENL
                     SDGIFAGKSVKDFASA"
     gene            complement(383..1075)
                     /locus_tag="ACFM72_001703"
     CDS             complement(383..1075)
                     /locus_tag="ACFM72_001703"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC6258245.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPKAKQW
                     LKIHGRELFALG"
     gene            complement(1072..1815)
                     /locus_tag="ACFM72_001704"
     CDS             complement(1072..1815)
                     /locus_tag="ACFM72_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC6258246.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            complement(1845..2408)
                     /gene="gmhB"
                     /locus_tag="ACFM72_001705"
     CDS             complement(1845..2408)
                     /gene="gmhB"
                     /locus_tag="ACFM72_001705"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HFC6258247.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            complement(2540..3781)
                     /locus_tag="ACFM72_001706"
     CDS             complement(2540..3781)
                     /locus_tag="ACFM72_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HFC6258248.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGDVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKMPVLFDTQAPVGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNAFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILTLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3933..4661
                     /gene="ubiG"
                     /locus_tag="ACFM72_001707"
     CDS             3933..4661
                     /gene="ubiG"
                     /locus_tag="ACFM72_001707"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HFC6258249.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLRGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            4697..5614
                     /gene="thrB"
                     /locus_tag="ACFM72_001708"
     CDS             4697..5614
                     /gene="thrB"
                     /locus_tag="ACFM72_001708"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HFC6258250.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLRAEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLG"
BASE COUNT         1166 a         1363 c         1861 g         1322 t
ORIGIN      
        1 ggaatgacgg cggtagattt ggcagatgcg gcggattcgg caggtctcaa cccatcctac
       61 aatccaccct gaccgccttt tacgaatccg ccgccatcct gggaaacgca aaaaaaatgc
      121 cgtccgaaaa cctttcagac ggcattttcg cgggcaaatc agtaaaagac ttcgcgtcag
      181 cttaagcgtt tcataccgca cgtcggaccg ggcgggtttc gggtttcgga agagcggtgt
      241 gaaatgaaac gcggcagacg gcgtgtgtgc cgccatcctg ccccgaaccg gcggcaaagc
      301 gtcatcgcgg tttgaatcgg gcgggcgcgt gcctgttccg gcacggatgc cgtctgaaag
      361 cggcgggtcg gtccggtccg cgtcagccta aggcgaaaag ttccctgccg tggattttga
      421 gccactgttt cgctttgggc gtgtaggggg cgaagcggcg ggtcagttcc caaaaggcgg
      481 ggctgtggtc gggatgggcg aggtggcaga gttcgtgtat gcagacatag tcggcaacgt
      541 attccggtgc gccgaccagc cgccagttga agcgtatgcc tgtggttttg cggcacacgc
      601 cccagaaggt tttggcagag gtcagcgagg aggaggcggg gaacagttgt gtggtgcggg
      661 cgtggcgttc gaggcgggga atcaggtaac tgtgcgcctg ccgttccaaa aagtcccgca
      721 gcagcgcaag ctgtttttcg ggtgcgcctt cgggaacacg gatttcagac ggcatcagca
      781 ggatttgcgt gtcttgatgg gcggtgaggg caagctgtct gccgtggaag aggatggatt
      841 cgggcagccg gttttcggca gtttgcggcg gcggtgtttt cgccagtgtt tgccgcagga
      901 cggcttcgtt ttcatacagc cagcggttta gagcggagac ggagaagcag ggtgggacgc
      961 tgatgcggac ggtatgtgtg ccggcggggc ggataatcag gtttttcttg gcacggcgct
     1021 tgatttcgac ggtcagttcc atgccgtctg aaagggtgtg gacaaaggcg gtcatgcggt
     1081 ttcagacggc attttggcgg caaacgggcc tgcgccggaa atgagcggct gctgcgtttc
     1141 gatgaggtgt tcgcattttc ccatcaattc ggcttcgctg ccgcttgcgt gcgggatggt
     1201 cggacagatg acgacggtga tttcccccgg atatttcaga aaggagtttt tcggccaaaa
     1261 ttcgccgctg ttgagggcga cggggacgat gtccatctca aacattttcg ccatgcgcgc
     1321 gccgccgagt ttgtatttgc cgcgttttcc aggcgcaagg cgcgtgcctt cggggaaaat
     1381 ggtaatccaa tagccttcgt ttttgcgcgc caacccctgt tttatgagct gctcgttggc
     1441 ttcgcggcgg ttgttgcggt ctatgcctat ggttttgacc agtttcaagc cccagccgaa
     1501 aaaggggatt ttgaacaact cgcgtttggc aacgtaaacc tgcggcggaa aaatgtcctg
     1561 aagggcgagc gtttcccagc cgctttggtg tttggcgcag atgacggcgg ggcggtcggg
     1621 gatgttttcc gcgccgatga tgcggtattt gagcccgacg atgtgtttga gcgagaggtt
     1681 gaggattttg acccagaccc gcgccatctt gtgcgccccg tctcggaaag gcgaggcgag
     1741 cagcataaag ggaaagagga aaatcagggt ggaacagagt atcagccagt aaatcaggtt
     1801 gcggatgatg agcatggttt tgccttgtcg gaaatgcggt atgttcagtc ggcttgcggt
     1861 gcggcgtttt cctgcatgat gtattgtgag aaatcgagca aggtatcgaa aacctgtgtg
     1921 tgttcgggta attcgtgtcc gtgttgggag agcgtttttt tgccttttcc ggtcagaacc
     1981 agcgcgggtt ttccgccgac ggcatcgatt gcctgcaaat cgcgcaggct gtcgccgacc
     2041 agccaggttt ccgaggcttg ggcgttgaag cgtccgatga tgtcttcaat catacccggt
     2101 ttgggcttgc ggcagttgca gttgtcggca tcggtgtgcg ggcagaacca gatgccgttg
     2161 atttcgccgc ctgcctgacg gacgaggcgg tgcattttgg cgtgcatttc ggtaaggttt
     2221 tgaacggtaa aatatttgcg cccgatgccg gattggttgg tggcaacggc gacggtgtag
     2281 cctgcctgcg tcagaaatgc caccgcatcc atgctgcctt cgacaggtat ccactcgtca
     2341 acggatttga cgaagtcatc gcggtcctga ttgatgacgc cgtcgcggtc gagaatgatg
     2401 agtttcatcg cgtttccttt gggttgggca ggtcgggggt ggcattatac tgaaatatcg
     2461 gcagtgatgc gcctgtgccg cgtgataacg aggcaatgcc gtctgaagcc gccggcgggc
     2521 ttcagacggc attttgcctt tatcctttaa atacggggac gagttccatt tggctcaata
     2581 cctgtgcggc gatgttgacg atgccgaaaa ggaagaccca aaccatcagc cacaagccgc
     2641 cgtaaacttt ataggttttg cctgcgccga attttttgcg cgaacggtag agcagcatgg
     2701 cggggatgat gcctgtccag acggttgccg ccaggccgac gtagccgatg gcggtaacga
     2761 agccggtagg gaagagcagg caggaaatca ggggcggcag gaaggtcagc gcggcggttt
     2821 tggtacggcc ggacacgctg tcgttccatt tgaagatgtc ggcgatgtag tcgaagagtc
     2881 cgagcgttac gcctaaaaac gaggtggcga tcgccatata ggaaaacagg gtcaatattt
     2941 tatccatatt gccggtttgg gcgaatttgg acagggtttc aatcaggacg gagacttgcc
     3001 cttcggcggc aatcacgggg gcgaacgcgt tgcgcggcag gttgccttgg atggcggttt
     3061 gccagaggac gtaaattacc agcgcaatca gtgtgcccgt ccagatggat ttagccactt
     3121 tgggcgcgtc gcctttaaag tatttgagca ggctggagac gttgccgtgg aaaccgaatg
     3181 acgcaaggca gacgggcagg gcggtggcgg cgtaaatcca gtagttggtg ccgacggggg
     3241 cttgggtgtc gaacaggacg ggcattttgg catcggcaat caggccgccg gttgcccaaa
     3301 taaaggttaa taccatgccg ccgatgagga cgctggtgaa gcggtcgacc aagcgtgcgg
     3361 atgcccatac gcaaaaggcg aggatgccga agaagacgag ttgtccgacg gtgagtgaaa
     3421 cgtcgccgcc tgccgcgctg cctaagcctt tggcggtcag gtcgccgccg acgaagatat
     3481 aagcgtaagt aagcaggtat aaaacgaagg cgacggcgat gccgttgatg atgttccagc
     3541 cgcgtccgag caggtctttg accatggtgt cgaagctcgc gccgtggggg tagtgggtgt
     3601 tgacttccaa aatcatcagg ccgctggaga gcatggaaaa ccaggtgtac agcaacacgg
     3661 ccagcgagcc ggtaaaccat acgccggatg tggcggtcgg gttggcgagc atacctgcgc
     3721 cgatgaccgt gccggcgata atcatcgcgc cgccgaacag tgaaggggtt ttggtgggca
     3781 tattttgtct ttctgccaga aaaagcgagc cgccattatg ccgtaaagtg taaggatttg
     3841 taaggcattt gcgccgcgcc gcccgaaaag gctttcagac ggcattgtgt tccatagtat
     3901 aatcttgggt tttggagtgg gcggttcgtc agatgggagg gaaaatgtcc gacaaaaaat
     3961 ataatgtcga tgagggggaa atcgccaaat tcagccggat tgccgacaaa tggtgggaca
     4021 agtcgggcga gttcaaaacc ttgcacgaca tcaatccgct gcggctggat tatatcgacg
     4081 gacacgcgga tttgcgcggc aaacgggttt tggatgtggg ctgcggcggc ggcatcttgg
     4141 cggaaagtat ggcgcggcgc ggcgcggcgt ttgtaaaggg tatcgacatg gcggagcagt
     4201 cgctggaaac cgcccgcctg cacgcggctt tgaacaatgt cgccgatatc gaatacgaat
     4261 gtatccgcgt ggaagacctt gccgaggcgg aaccgcactc gttcgatgtg gtaacgtgca
     4321 tggaaatgat ggaacacgtc cccgatcccg ccgccatcgt gcgtgcttgt gccaatctgg
     4381 tcaaaccgga cggcatggtg tttttttcca ccatcaataa aaacccgaaa tcgtacctgc
     4441 atctgattgt ggcggcggaa tatctgttga agtttgtccc caaaggcacg cacgactgga
     4501 aaaaattcat cgcacctgcc gagctggcgc ggatgtgccg tcaggcgggc ttggatgtgg
     4561 cggatacgaa gggtatgact taccatgttt tgtcgcaaac ttatgccctg tgcgattcga
     4621 ccgatgtgaa ttatatgttt gcctgccgtc cggcgttctg acggcgggtt tgattgtttt
     4681 gaacgggtga atggatatgt ctgtttatac cagtgtttcc gatgatgaaa tgcgcggctt
     4741 cctgagcggt tacgatttgg gggaatttgt ttccctgcag ggcatcgcgc aggggattac
     4801 caacagcaat tattttctga cgacaacttc gggacgttat gtgctgaccg tgtttgaagt
     4861 gttgaaacag gaagagctgc cgttttttct ggagcttaac cggcatttga gtatgaaggg
     4921 cgtggctgtt gccgcgccgg ttgcgcgcaa agacggccgg ctcgattccg ttttggcggg
     4981 caagcccgcc tgcctggttg cctgcctgaa aggttcggat accgcgctgc cgacggctga
     5041 gcagtgtttc cataccggtg cgatgctggc caaaatgcac cttgccgccg ccgatttccc
     5101 tttggaaatg gaaaacccgc gttacgatgc gtggtggacg gaagcgtgcg cccgactgct
     5161 gcccgtcctg tcgcaagacg atgccgcact tttgcgtgcc gaaatcgatg cgctgaagga
     5221 caatctcggc aaccatctgc cttcgggcat catccacgcc gatttgttta aagacaatgt
     5281 attgcttgac ggcggtcagg tgtcgggctt tatcgatttt tattatgcct gccggggcaa
     5341 ttttatgtat gacttggcga ttgcggtcaa cgattgggca aggacggcgg acaataagtt
     5401 ggatgaggcg ttgaaaaagg cgtttatcgg cggttatgag ggcgtgcgcc ccttgagtgc
     5461 cgaagaaaag gcgtattttc cgaccgccca acgcgccggc tgcatccgtt tttgggtgtc
     5521 gcgcctgttg gattttcatt ttccgcaggc gggcgagatg acgtttatca aagacccgaa
     5581 cgcgttccgc aacctgctgt tgagtttggg ttgagtgcgt ccggcgtttg acagaaatgc
     5641 cgtctgaaag ggtttcagac ggcattttta tggctgatta aaacgaaaat gagacgatag
     5701 ccgggtattt tc
//
LOCUS       DAXHRP010000132         5704 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.132, whole genome shotgun sequence.
ACCESSION   DAXHRP010000132 DAXHRP010000000
VERSION     DAXHRP010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5704
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.132"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(65..5425)
                     /gene="iga"
                     /locus_tag="ACFM72_001709"
     CDS             complement(65..5425)
                     /gene="iga"
                     /locus_tag="ACFM72_001709"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_050177927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HFC6258251.1"
                     /translation="MKTKRFKINAISLSILLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKDKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADKIKQRDNAGTIKGNGEHHWNITFG
                     TNSKIGSTAVRLAGNEKDANNGQNVTFEDNGTLVLDQNINQGAGGLFFKGDYTVKGAN
                     NDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVI
                     LNQKADSNQKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFE
                     HIRNVDEGARIVNHNTGHASTITLTGKSLITAPQNLSVYEIRNDYDDDDYYGYYSYRK
                     PIPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWILMGSTQEEAKKNAMNHKN
                     NQRISGFSGFFGEENGKGHNGALNLDFNGKSAQNRFLLTGGTNLNGKISVTQGNVLLS
                     GRPTPHARDFVNKSSAQKDAHFSKNNEVVFEDDWINRTFKATEIAVNQSASFSSGRNV
                     SDITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKALNSFGATQINGN
                     VNLSQNAALALGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNLSLADSHIHLNN
                     ASDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGHYQLHVQDKTGE
                     PNQEGLNLFDASSVQDRSRLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRV
                     KPTPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAKRQQAKAEQVKR
                     QQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELSAKQ
                     KVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRVGEEERRQTAQ
                     SQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKAAEL
                     LAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELSANQKATAEAQA
                     LAARQQKALARQQEEARKAAELAVKQKAETERKTAELAKQRAAAEAAKRQQEARQTAE
                     LARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQPQRRKRRAAPQD
                     YMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDYEEIPLDALEDE
                     NVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQPQAQAAAQPQAQAVAQ
                     ADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDY
                     ASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYG
                     KYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAG
                     IRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYG
                     KGGVNVGGNSFAYKADNQQKYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQI
                     RF"
     gene            complement(5523..>5704)
                     /locus_tag="ACFM72_001710"
     CDS             complement(5523..>5704)
                     /locus_tag="ACFM72_001710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258252.1"
                     /translation="QNQKPKIPSFPHKRESKNKKPQKFNGRTEPRKSASRLRLNNRTK
                     EAKIKTSGFFFLNWQ"
BASE COUNT         1142 a         1269 c         1371 g         1922 t
ORIGIN      
        1 ctataaaaat gccgtctgaa gcctgagttc agacggcatt ttattttgct atgaatttag
       61 tattttagaa acgaatctgt attttaattt gtccggattt ttgtttttcc aattgttttc
      121 cttttgtaat actgccattt acgtttaatg taacattacg gtacagtaac gcggcacctg
      181 ctgaatattt ctgttgatta tctgctttat aggcgaagga attaccgccc acattcacgc
      241 cgcctttgcc ataattggca aagtaagctg cagataacaa gggttttacg gtaaggttgc
      301 cgactttaaa ccgataagca aaatccagtc cggccgtcag tgttttcact gacatagaac
      361 ttactttaac actgtcgtta cccaacttgt aatctgcaga tgacaggcgg ctgtaacgga
      421 ttcccgcact ggggacaatc tcgaattgat tgattttcag cgtattgccc aaagtaaggc
      481 cggtttggat acttgttcgg ttaaagtttg ctttttgctg tgtttgtaac cggcttctca
      541 agctgcctgc accaatatcg ccggccacat accaagcatc atttaaataa tacttaccat
      601 aaaggttggc ttgcacaaaa gtatttttgc cgctcgcctg atcaaaagta tgctgactgt
      661 cagagtaagt caatacgccg cctatctgca tattttcgga caagctgcgg tcaatgccga
      721 tttgtgtttg cgtgcgtttc gaactaaacc ggcgatattg tgcggaagca taatcacggc
      781 cataaccgat gttcgacatc caaacgctgt ttttttcggc atcagcacgt gatttttgtg
      841 caatgtgccg tgttaatgaa gcacctgtat ccaacaagat agattgcgtg cttgccattg
      901 cgtcagataa agccgagttg gtattggtgc tgactgcatc ggcttgcgcg acggcttggg
      961 cttgcggctg cgcggcggct tgggcttgcg gctgcgcggc ggcttgagct cgcggctgcg
     1021 cggctcttgg ttgcaaactc actgtctcaa ctttttcatg aagttccgta ttgtcttgag
     1081 gctgtttgtc tgatgtgtca actgattcag atacattttc atcttccaac gcatccaagg
     1141 ggatttcttc atagtcattt tcataccagt ccggattatg caaggccctg ggtgctgcgt
     1201 aagctgacga atcaaatgat ggcgagggcg gtgccggcag agtagatctg cgtccgcgac
     1261 gtttcggacg attttgggaa gctgccatat aatcctgagg tgcggcacgg cgttttcggc
     1321 gttgcggctg ggattgggct gcttgacggt gctcttcttc ctcagctttt cgtttcgccg
     1381 attctgccgc ttctcgatct gtttcggctt tttgttttgc cgacaactct gctgcttggc
     1441 gttccgcttc ttgacgacgt gcaagttcgg cggtctggcg agcttcttgc tggcgttttg
     1501 ctgcttcggc tgctgccctt tgcttggcaa gttcggcggt tttgcgttcg gtttccgctt
     1561 tttgtttgac ggctaactct gcagcttttc gtgcttcttc ctgttgacgc gcaagggctt
     1621 tttgttggcg tgccgccaat gcttgggctt cagctgtggc tttttggttt gccgacaatt
     1681 ctgccgcttt gcgttctgct tcctggcgat gtgcaagttc ggcagcttgg cgttttgcct
     1741 cttcggcttc tgcttttcgg cgcgcagcca atgcttgagc ctcacgttcg gcttctgccc
     1801 tttgttttgc caacaactct gccgctttgc gttcttcctg ctgtcggcgc gcaagttctg
     1861 cttgggcttg ggcaatttcc acattgtttt gctgtaccga acggtgtccg cggcgtttag
     1921 gacggtcttg ggaagctgcc atataatcct gcggtgcggc acggcgtttg cggcgttgcg
     1981 gctgggattg ggctgtttga cggcgttcct cttccccgac cctttgtttt gccgacaact
     2041 ctgccgcttc gcgttctttt tcatgccggc gtgcaagctc tgcagcttgg cgttttgcct
     2101 cttcggcttc tgcttttcgg cgtaccgcca atgcttgagc ctcacgttcg gcttcgactt
     2161 tttgttttgc cgacaactct gccgcttcgc gttctttttc atgtcgacgt gcaagttcgg
     2221 cgctgctgcg ttcttgttct gctttttggc gggtcgccag ctctcttgct tcgcgttcgg
     2281 cttctgcttt ttgttttgct aactctgccg atttacgctc tgcttctgct tgctgacgct
     2341 tcacttgctc cgcttttgct tgttggcgtt ttgcttcttc ggcttgattt gcctgcgggc
     2401 taggtggtgc gacgacgata ttttgaggct tggcaatttg tgcaccgtcc gtttgtgttg
     2461 ccttttgtgc ttgagaagcc gtgtttgtgg caggagacgg ggtcggtttg actcggcggc
     2521 ggttctcggc ataaggattg tacaatcggg taataccgtt ttctgttttg attgtataac
     2581 gcaatgcgcc taaatctaca tggttattcg ccaaggaaac agaaaggcgg gagcggtctt
     2641 gtacggatga tgcatcaaag agattcagcc cttcctgatt gggttcgcct gttttatctt
     2701 gaacatggag ctgataatga ccggatgcgg attccttcac aagcacttta tccccaagat
     2761 ttttcgccag gtgcgtcaga taatgaaaat gcccgttacc ggataaatga ttgattttga
     2821 gcgtgtggta tttatttgca ctttgcgcgt cggaagcgtt gttcaaatga atatggctat
     2881 ccgccaatga cagattgtgc acttggctgt cgccggtcaa atgccatttg ctatgttggt
     2941 ttaggctgac acggctgttt ccttgccctt gaatttgccc ccataatgca gccttgccca
     3001 aagccaatgc cgcattctga ctcaaattca cattgccgtt aatctgtgtc gctccaaagc
     3061 tgtttaaagc cttatcggat aagttgtctg tgttgcaggt aacgtaaccg gtatagtccg
     3121 agcgcacgca aacctcatcg ccgtttttgt aacccaaatt tactttggcg ttgtctgttg
     3181 cggtaatgtt ggcggtgatg tcggatacat ttctgccgga agagaatgat gcggattgat
     3241 taaccgcaat ttctgtggct ttgaatgtgc ggtttatcca gtcgtcttca aatacgactt
     3301 cattgttttt ggagaaatgt gcgtcttttt gggctgaaga tttgttcaca aaatctcttg
     3361 cgtgtggtgt tggacgacct gataacaaga cattgccttg agttacgctt atttttccgt
     3421 ttaaattcgt gccgcctgtt aacaagaaac ggttttgcgc gcttttgccg ttgaaatcaa
     3481 ggtttaatgc gccgttatgt ccttttccgt tttcttcgcc aaagaaaccg ctaaaaccgc
     3541 taatacgctg attgtttttg tggttcatcg cgtttttctt ggcttcttct tgtgtgctgc
     3601 ccattaaaat ccagtcgtta ttttccgttt gtccgttttc gggcatcggt gcgttcacgc
     3661 tgccgccgga ttttagggcg taataacgat agtttttgta ataaagatct ttgccttgcg
     3721 gaatgggttt tctatagctg taatagccat aataatcgtc atcatcgtaa tcatttcgga
     3781 tttcataaac agaaagattt tgaggagcgg taattaatga tttgccggtt aatgtgattg
     3841 tggaggcgtg acctgtgttg tggttgacaa tgcgcgcgcc ttcatccacg ttgcggatgt
     3901 gttcaaaagt caagtcattg ccattggcat ccaaacgacc gccacggaaa ccgaaatata
     3961 ggttatcggg attaatctga tttgaactat ttaataccaa tgtaccgcgt ccgctgacaa
     4021 tgccgacttg ggagaaagcc tggacttttt ggtttgaatc ggctttttga ttcagaataa
     4081 ctgtaccgtc gccgactttt aattgccctt ggttaacgcc tgtgccgttt atttctaatg
     4141 tgcctttgcc gatttttgcc aatctgtcac cattcggatt tttgacttgc caaacgactt
     4201 ttttgccgtc ggcaacatca atccccgcac ctagccaagt gatgtcatta tttgcacctt
     4261 tgactgtgta atcgcctttg aaaaacagac cgcccgcgcc ttggttgatg ttttgatcca
     4321 ataccaaagt gccgttgtct tcaaaggtaa cattctgtcc gttgtttgca tccttttcat
     4381 tgccggcaag ccttaccgct gtagaaccaa tcttgctgtt tgtgccaaaa gtaatgttcc
     4441 aatgatgttc tccattacct ttgatggtgc cggcgttatc gcgttgtttg attttatctg
     4501 caaattcttt tttatagata ttccattctt gccaagagtt tttttgatag cctgcccaat
     4561 aatcgtaagc acctaaaaag acccagcgtt tttcttgttt atcataagca aataatggtg
     4621 aaccgctatc gcctaacaca gcatagttag tcaatgcgtt ttgagataaa acttctttga
     4681 gtttttctgg ggaatgatgt tttgaattat caccgaagcc aatcaagcct tcttgattta
     4741 gattcgatgt gacattcacg tcttgataag gcgtacctgc aatggcataa cgataagctc
     4801 gtgaaagctc tgtcatattg tagcggctgt tatattcaaa ttgcgtacct gctccaactc
     4861 gcacaaactc agaaaaacgg tttttatctt tataggtttc aacgccgccg cctgcactgg
     4921 ttggtgcaat aggtgcgact tctgttacga atttattaag gcgtgccatg ttgtagtctt
     4981 caagacgacc ttgattaccg tgatgccaat ttttatttgg ttcgtagtca ttttgtgcaa
     5041 ctgaacgata ttcgttttca tcattgctaa catctaagtg cccattgtga tgcccgtaat
     5101 aagagatttc gtctcctttt acatgtttga cgctgacggc atactgggga tcgatgacgg
     5161 ttaatgtacg tctgttgaca tctgcaacgc taaaatcaat catcggtacg ttggataatg
     5221 cgttgccgat gttttgacct tgtttgtttt tcactgataa atcggttgcg ccgacaaaaa
     5281 atttgccttt gttttctgca aagtcacgga atatttgata atcgacatcg tctctgacca
     5341 atgccgcttc tgagtatggc gtaagggcat aggcaagaag gatggataag gatatggcgt
     5401 taattttaaa acgtttggtt ttcataaggt tttaccgttt taagggtgat aatgttttgt
     5461 attttacgcc ggtttggcgg tgttgactat tttttgttgt gtaaatcatt aattttggtg
     5521 ttttattgcc aatttaaaaa aaagaatccc gatgttttta ttttcgcttc ctttgttctg
     5581 ttattcaagc gaaggcggga agccgatttt cggggttcgg ttcttccgtt aaatttctgc
     5641 ggctttttgt ttttggattc ccgcttgtgc gggaatgacg ggattttagg tttctgattt
     5701 tggt
//
LOCUS       DAXHRP010000133         5690 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.133, whole genome shotgun sequence.
ACCESSION   DAXHRP010000133 DAXHRP010000000
VERSION     DAXHRP010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.133"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            97..813
                     /locus_tag="ACFM72_001711"
     CDS             97..813
                     /locus_tag="ACFM72_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HFC6258253.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            962..1864
                     /locus_tag="ACFM72_001712"
     CDS             962..1864
                     /locus_tag="ACFM72_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HFC6258254.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIALLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1907..2680
                     /locus_tag="ACFM72_001713"
     CDS             1907..2680
                     /locus_tag="ACFM72_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HFC6258255.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EDAGSLKRHHGGASSGGNLPEGLPASRQIQCQNEKNAIARLIAEHIPDESSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2792..4480
                     /locus_tag="ACFM72_001714"
     CDS             2792..4480
                     /locus_tag="ACFM72_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HFC6258256.1"
                     /translation="MLNKDQFADNHFIRTIIEDDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFVKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFEAGRTQNRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLTPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4573..5529
                     /gene="gshB"
                     /locus_tag="ACFM72_001715"
     CDS             4573..5529
                     /gene="gshB"
                     /locus_tag="ACFM72_001715"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HFC6258257.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWQLFHTLSGELSV
                     NGGLVTAQASAFEFLGAKNDDDHEWFKAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFIAPTLVTTRSADVRVFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1335 a         1534 c         1571 g         1250 t
ORIGIN      
        1 atttgtgcaa tgctttaatt cctctgacac gatttgaaac acagccgcct taaaacatct
       61 taaaaaattt gaaagcgtaa aaatacggaa aacatcatga actttgaaaa cgacgacatt
      121 atccatgcgc cgaccacgtc ttccctgatt ctcgaagagc ggcacgattc ggagctgttc
      181 cgtgtttacg ccctgatttt ggacggcatt accgatcagg tgctgctgcc cggcaaaaag
      241 ctgaccgaat ccgaactttg ccgtcagatg gtgtgttcgc gcaacaccgt ccgcggcgcg
      301 ctgtcgcttt tggcgcacga caagattgtc gatttgcaac ccaacagggg cgcgttcgtc
      361 cacgttcccg atttgaaaga aatgcaggat gtgttcaatg cgcgcatcga aatggagacg
      421 atgattttga atatcctcgc agatttgccg gatttggaaa cgcgcctcaa gccgctttat
      481 gcgatgatac ggcgcgaaga agaggcctcc ggcaggggcg accgcgttgg ctggaaccgc
      541 ctgtccaatg ccttccacgt cgaactggcg cgcctggtgg gcaacgatgt gctgttcgac
      601 attatgaaca cgctgtgcgc gcggtcttcc ctgattgtcg ccgtggcggg cgtgcatcgc
      661 gaggaaaaac acgccatcaa tacgcatacg cattcagaac accgcgaaat cctcgacctg
      721 ctgctggcgg gcaggcgcaa ccgcgtggtc aaaatcctgc gccgccattt gggcaactgt
      781 atggagcgtt tggaaaagac tttggaagat tgaatgccgg agcggataag ccgcctgaac
      841 cttcaggcgg ttttttaatg gcgaacctga tgccgtctga aatatggatg cgggtatctg
      901 caattttcag acggcaattt ttaaaccgca catatcatgc ggcaataaag gagagcagta
      961 gatggacagc ctgatgacat tgctttcggt attgataccg atgtttgccg gattttttat
     1021 ccgtgtgccc aagccttacc tgcccgcttt ggataaggtg ctatcggtct tggtgtatgc
     1081 cgtgctgctg ctgatcggcg tatcgttgtc gcgcgtggag gatttgggtt cgcggttgga
     1141 cgatatggcg ttgacggttc tgtggctgtt tgtttgtacg gtcggggcga acctgcttgc
     1201 tttggcagtg ttgggaaagt tattcccgtg gcggataaag gggaaaggga agggcgtttc
     1261 ggtcggtgtg tcgggcagtg tggggcagct cggatgcgtg ctgctcggat ttgcatccgg
     1321 caaactgatg cgcgatattt ggatgccgtc tgaaaacgcg ggtatgtatt gtctgatgct
     1381 gctggtgctc ctcatcggcg tacagctcaa aagcagcggc gtatcgttgc ggcaggtttt
     1441 ggtcaaccgc aggggtattc ggttgtcggt ctggtttatg ctttcatctc tttcaggcgg
     1501 gctgctgttt gccgcatcgg cagacggtgt gtcgtgggtg aaaggtttgg cgatggcttc
     1561 cggcttcggt tggtattccc tctcgggttt ggtgatgacc gaggcttacg gcgcggtatg
     1621 gggcagtatc gcgcttttga acgatttggc acgagagctg ttcgcgctgg catttattcc
     1681 gctgctgatg aagcgttttc ccgatgcggc agtgggggtc ggcggcgcga ccagtatgga
     1741 tttcacattg cccgtgattc ggggtgcggg cggcttggaa gccgtaccgg tagcggtcag
     1801 cttcggcgtg gtggtcaata tcgccgctcc gtttctgatg gtggtgtttt ccgctttggg
     1861 ctgaacgcgg taaaatcggc atcccgatgc aaggaggcag aaaacgatga aaccgaaaat
     1921 ccaaaggcac ggagagattt taagccttgt ccgccggcat cagtttatgt cggtggacga
     1981 gcttgccgcc gcattggacg ttaccccgca gacgatacgc cgcgacatcc gcgaattgga
     2041 ggatgctggc agcctgaaac gccaccacgg cggcgcatcc tcgggcggaa acttgccgga
     2101 ggggctgcct gccagccgcc aaattcaatg tcaaaacgaa aaaaacgcca ttgcccggct
     2161 gattgcggaa catattcccg acgagtcatc gctgtttgtc agtatcggca cgacgatgga
     2221 agccgtggca tcggagctgg tgagacggcg cggcagcctg cggattatta ccaacaatat
     2281 ccacgtcgcc tccatcgttt cggcgcggac ggattacacg gtcatcatca cttccggagt
     2341 cgtccgccct ttggacggcg gtattaccgg cgtggcaacc gtcgatttta tcaaccagtt
     2401 caaagtcgat tatgccgtga tgagtacgca cggcgtggaa agcgacggtt cgcttttgga
     2461 cgacgactac aaagaagtca gcgtgatgca ggcgatgatt gccaacgcgc gcgtccgctt
     2521 cctcggcgtg gaccacagta aattccgcag caacgcgctg gtcaggctcg gcgacattac
     2581 ggcgtttgac aaagtattta ccgaccggct gcccgatacc gcgatgcaga agatgctgaa
     2641 agaggcgggg gtggaatgcc tgattgccga tgccgtctga acgctatgtc aaagcgcgca
     2701 agtcgggtac aataaacaca tcatcaaacc gcttcagacg gcataaggaa ccgccccaat
     2761 gccgtctgaa gccatctgtt caaagaaaac tatgctcaat aaagaccaat ttgcggacaa
     2821 ccattttatc cgcaccatca tcgaagacga cctcaaaagc ggcaaacacg aagccgtcca
     2881 aacccgtttt ccgccggagc ccaacggcta cctgcacatc ggacacgcca aatccatctg
     2941 cctgaacttc ggtttggcgt atatttacga cggcttgtgc aacctgcgtt ttgacgatac
     3001 caaccccgaa aaagaaaacg acgaatacgt caacgccatc aaagaagatg tcgagtggct
     3061 cggtttccat tgggcgggcg agccgcgttt cgcttccaac tatttcgacc agctttatga
     3121 ctacgccgtc ggtttgatta aagacggcaa agcgtatgtc gatgatttga cgcccgaaga
     3181 aatgcgcgaa taccgcggta cgctgaccga agcaggcaaa aacagccctt atcgcgaccg
     3241 cagtatcgaa gaaaacctcg acctgttcac gcgcatgaaa aacggtgagt tccccgacgg
     3301 cagcaaaacc ctgcgcctga aaatcgacat ggcatccggc aacatcaata tgcgcgatcc
     3361 ggtcatctac cgcatccgcc gcgcccatca ccacaacacc ggcgacaaat ggtgtatcta
     3421 cccgatgtac gactacacgc attgcatttc cgatgccatc gaaggcatca cgcattcctt
     3481 gtgtacgctt gagtttgaag cccaccgccc gctttatgac tgggtgttgg acaacatccc
     3541 tgcgccgcac gccacacgtc cgcgccaata cgagttttcc cgtttggagc ttttgtacac
     3601 cattacctcc aaacggaaat tgaatcagtt ggttgtggaa aaacacgttt ccggctggga
     3661 cgatccgcgt atgccgacca tttccggtat gcgccgtcgc ggttacacgc ccgaaggcct
     3721 gcgcctgttt gtcaaacgcg ctggtatttc caaatctgaa aacatcgtcg atatgagcgt
     3781 gttggaaggc gcgattcgcg aagagttgga aaattccgcc ccacgcctga tggcggtttt
     3841 gaacccgctc aaagtgaccc tgaccaactt tgaagccggc agaacccaaa accgccgtgc
     3901 cgcgttccat ccgaaccacg aagaaatggg cgatcgcgaa gtacctgttt cacaaaccat
     3961 ttacatcgaa gccgacgact ttgccgaaaa tccgcccaaa ggcttcaaac gcctgactcc
     4021 gggcggcgaa gtacgcctgc gccacggcta tgtcatcaag tgcgatgaag tcgtcaaaga
     4081 cgaggcaggc aatgtggtcg aactcaaatg cagcatcgac cacgatacct tgggcaaaaa
     4141 tcccgaaggc cgtaaagtta aaggcgtgat tcattgggtg tctgccgaac acgcagccga
     4201 aatcaaagtc cgtctgtacg accgcctctt taccgtcgag cgtcccgatg ccgtgcgcgg
     4261 cgaagacggc gaatacctgc cgttcaccga tttcctcaat ccggaatccg tcaaggaaat
     4321 caccgcctac gccgaacctg ccgcgaaaga tttgccggca gaaagccgtt ggcagttcga
     4381 gcgtatcggc tacttcgtaa ccgaccgtaa agaccacggc aaagacacgc cggtgtttaa
     4441 ccgcacggtc acgctgaaag attcttggca gcctaagtaa aaccccatcc ttgccgtctg
     4501 aatattgttc ggacggcatt tcccctttgc ccgcgaaatg cggcacattc ggcacaccgg
     4561 aaaggaaata tgatgaaagt cctctttatc gccgacccga tggcaagttt caaaacctac
     4621 aaagacacca cctacgccat gatgcgcgag atggcaaaac gcggctggca actgtttcac
     4681 acattgagcg gggaattgtc tgtaaacggc ggtctggtaa cggcacaggc atcggcattt
     4741 gaatttttgg gtgcaaaaaa cgatgatgac catgaatggt ttaaagcggc ggacaaagtt
     4801 cagacggcat tgaaagcatt tgatgccgtg attatgcgta ccgatccgcc gttcgatatg
     4861 caatacctct acgccaccca attactgacg ctggcggaac agcagggcgc gaaagtcttt
     4921 aacagcggac aggcgatgcg tgatttcaat gaaaaactgg cgattttgaa cttcagccgc
     4981 tttatcgcgc ccacgctggt aacgacccgt tccgccgatg tccgcgtatt tttgaaagaa
     5041 cacggcgaca tcatcattaa accgctcgac ggcatgggcg gtatgggcat cttccgcctg
     5101 accgaaaaag accccaacat cggcagcatc ctcgaaaccc tgatgcagct tgattcccgc
     5161 accattatgg cgcaacgcta cattcccgaa atcgtacacg gtgacaaacg catcctgatt
     5221 atcggcggcg aagtcgtccc ctatgctttg gcgcgtatcc cgcaaaacgg cgaaacacgc
     5281 ggcaaccttg cggcaggcgg gcgcggcgtg gcgcaggaat tgggcggacg cgaccgcgaa
     5341 attgccgaaa cgctcgcccc cgaactcaaa cggcgcggca tcctgctggc cggtttggac
     5401 gttatcggca gcaacctgac cgaagtcaac gtaaccagcc cgaccggatt ccaagaaatc
     5461 atgaaacaaa aaggtttcga tgtggcggca atgtttgccg atgccgttgc cgcgtggtcg
     5521 gtacgttaaa ccgatgtcgt ctgaaaggct tttgcttcac aaccgtttgg tttgttcggg
     5581 caggcagggt tttccctcag tcggcagaga tacgcttaat gccgtacgga cacaccgccg
     5641 ccccgttttc agacggtata tatagtggat taacaaaaat caggacaagg
//
LOCUS       DAXHRP010000134         5667 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.134, whole genome shotgun sequence.
ACCESSION   DAXHRP010000134 DAXHRP010000000
VERSION     DAXHRP010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.134"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..208
                     /locus_tag="ACFM72_001716"
     CDS             <1..208
                     /locus_tag="ACFM72_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258258.1"
                     /translation="FSELYMFQQRTAHQAPHCVLPERDYPPIRFYRYKQTGFNRKGMG
                     IKSISDTSRAMPSENQSPLSDGIV"
     gene            285..1232
                     /locus_tag="ACFM72_001717"
     CDS             285..1232
                     /locus_tag="ACFM72_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HFC6258259.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="ACFM72_001718"
     CDS             complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="ACFM72_001718"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HFC6258260.1"
                     /translation="MQNTSFDNESDYSDDSDFVSASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLSAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPKTGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2507..3310
                     /locus_tag="ACFM72_001719"
     CDS             2507..3310
                     /locus_tag="ACFM72_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HFC6258261.1"
                     /translation="MKKILLTVSLGLALSACATKGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3368..5587)
                     /locus_tag="ACFM72_001720"
     CDS             complement(3368..5587)
                     /locus_tag="ACFM72_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HFC6258262.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1367 a         1800 c         1368 g         1132 t
ORIGIN      
        1 tttctccgag ctttatatgt ttcaacagag gacggcacat caagcaccgc actgcgtgtt
       61 gcccgaacga gactaccctc cgattagatt ctatcgctat aaacagacgg gtttcaaccg
      121 aaaaggaatg gggataaagt ccatttccga cacctctcgg gcgatgccgt ctgaaaacca
      181 atctccactt tcagacggca ttgtttaggc acggccattt tgcaaattaa ggttaaggcg
      241 tgtatgcttg ccttccctta aaaacaaaca cgcaacgcat tattatgaat atcctcagta
      301 aaatcagcag ctttatcgga aaaacatttt ccctctgggc cgcgctcttt gccgccgccg
      361 cttttttcgc gcccgacacc ttcaaatggg cggggcctta tattccttgg ctgttgggca
      421 ttattatgtt cggtatgggt ttgacgctca aaccttccga cttcgatatt ttgttcaaac
      481 atcccaaagc cgtcatcatc ggcgtaatcg cacaattcgc cattatgccg gcaaccgcct
      541 ggctgctgtc caaactgttg aacctgcctg ccgaaatcgc ggtcggcgtg attttggtcg
      601 gctgctgccc gggcggtacg gcttccaatg tgatgaccta tctggcgcgc ggcaatgtgg
      661 ctttgtcggt tgccgttacg tctgtttcca ccctgatttc cccattgctg actcccgcca
      721 tcttcctgat gcttgccggt gaaatgctgg aaatccaagc ggccggtatg ttgatgtcca
      781 tcgtcaaaat ggttttgctc cccattgttt tgggtttgat tgtccataag gttttgggca
      841 gtaaaaccga aaagctgacc gatgcgctgc cgctggtttc cgttgccgcc atcgtgctga
      901 ttatcggcgc ggttgttggg gcaagcaaag gcaagattat ggaaagcggt ctgctgattt
      961 ttgcggttgt cgtactccac aacggcatcg gctacctgct cggcttcttt gccgccaaat
     1021 ggaccggcct gccttatgat gcacaaaaaa cgctggccat cgaagtcggt atgcaaaact
     1081 cgggtctggc cgccgcgctg gccgccgcac actttgccgc tgcgccggtc gttgccgttc
     1141 cgggcgcatt gttcagcgtg tggcacaata tctccggctc gctgctggca acttattggg
     1201 cggccaaagc cggtaaacat aaaaaaccct aaacgccttt catcataatg ccgtctgaac
     1261 ggggcaaacg aaaccggcgg tttccgcccg accccttcag acggtctttg tttgaaatcg
     1321 gcgggaacga ttgcccggct gctccgattc tgctgcctgc gttcgccccg cctttcaagc
     1381 cgcctactcc cttacataaa ccacttcgac atcgtagtcg tcttcgttcc aatcgtcatc
     1441 gtcgtccgcg ccgaatttgt cctgccattc ctcttcattg ctcaaagacg aatccaaacc
     1501 ggcttcaaga cggaggacag acaacaaatg atatatgtcg tccggaatcg gtgcttcaaa
     1561 cgaaacggtt tcgccggttt tcggatgagt gaaacttaag cggtaggcgt gcaatgcctg
     1621 acgcgcaccc aaacttttaa cggcttcttt caccgtgtcg ccgcacggat ggcgcgggtt
     1681 gccgtaaacc gggtcggcgg caagcggatg gttggcctca cgcatatgga cgcggatttg
     1741 gtgcgtcctg cctgtttcga gcgagcattc gatatagctg tgcgccagat agcgttccaa
     1801 cactttgacg tgggtaacgg ctggtttgcc gccgaatttg acgactgcca ttttcaggcg
     1861 gttgtgcgga tcgcgtccga tttgggtttc gattttaccg tcaaagggaa cgatgccgtt
     1921 ggcgacggcg cggtaaatgc gtttgaccgt gcgctcttga agctgcctca cgagggaatt
     1981 ttgcgccgac agggttttgg caaccaccat cagcccgctg gtttctttgt ccaaacggtg
     2041 tacgatgccc gcgcgcggaa tttgggacag ctcggggcaa tgcgccaaca ggccgttgag
     2101 cagcgtcccc gtccagttgc ccgccgccgg atgcaccacc agtccggccg gtttgttgac
     2161 gacgatgacg gtatcgtctt cgtaaacaat atccaaagcc ataggctctg gaacaaacgc
     2221 cagattttcc tcactcggac ggacggttac acaaatttgc tcgccgccta tcattttgtc
     2281 tttgggttgc gaaggtttat cgtttacaat aaccgcgcct tctttaatcc atgatgtcag
     2341 gcggctgcgc gagtagtcgg gcagaagttt cgccaacacc gcatccaacc gcccgccggc
     2401 aagctcgagc ggaacggtca gaccgatacg gttttcagtt tcggaagctg acacaaagtc
     2461 tgaatcatcg ctataatcgg attcattatc aaaggaagta ttctgcatga aaaaaattct
     2521 tttaacggtt tcattaggtt tggcactgag tgcctgtgcc accaaaggta cggtagataa
     2581 agatgcccaa attacccaag actggagtgt ggaaaaactc tatgccgaag cccaggacga
     2641 attgaacagc agcaattata cgcgggctgt caagttatac gaaatcttgg aatcgcgctt
     2701 ccccaccagc cgccatgccc ggcagtcgca actggatacc gcatacgcct attataaaga
     2761 cgatgaaaaa gacaaagctc tggcggcaat cgaacgcttc cgccgccttc acccgcaaca
     2821 cccgaatatg gattacgcgc tgtatctgcg cggcttggtg ctgttcaacg aagaccagtc
     2881 cttcttgaac aaactggcct cgcaagactg gtccgaccgc gacccgaaag ccaaccgcga
     2941 agcgtaccag gcgtttgcgg aactcgtcca acgcttcccg aacagcaaat acgccgccga
     3001 tgcaaccgca cgcatggtca aactggtcga tgcactgggc ggcaatgaaa tatcggtggc
     3061 gcgctactac atgaaacgcg gtgcatacat cgccgccgcc aaccgcgccc aaaaaatcat
     3121 cggcagctac cagaatacgc gttatgtcga agaatcgctc gccatattgg aacttgccta
     3181 ccaaaaactc ggcaaaccac agcttgccgc cgatacgcgc cgcgtgttgg aaaccaactt
     3241 cccgaaaagc ccgtttttga cgcacgcttg gcagcccgac gatatgccct ggtggcgtta
     3301 ctggcattaa gcccatcttc gtaatgccgt ctgaagccgt ttcagacggc attttatgtt
     3361 tcaaacctca ttcaaacggt tttttctgcc aatagaattt ataccctctc aaacgttgag
     3421 ccttcacgcc gccgcgtccc aagccgaatt gcagtgcgcc cgacaaatcg gtacgcagca
     3481 atttgatgcc gtgtgcgcgg acacggttct gcaccgcttc ggtcggatgt ttgtaggcgt
     3541 tggcataacc gcttgaagca acggcatatt cgggcgagac ggcattgagg aacacgcccg
     3601 acgaggacgt attgctgccg tgatgtccca aaaccaaaac ctggctgtac aggttgcctc
     3661 catacttgcc gaccaggctt tcctcgccct tcgtatccaa atcgcccgtt accagcagtg
     3721 ccgcaccgcc cgccacaaca cgcaaaacac aacttttccc attatcatcg atgtttttgc
     3781 gttcagacgg catcaaaaac tcaaaatcca cgccgtccca ttgccaacgc tgttccgcac
     3841 aatgccgcgc cccctcataa aattccggct gtccggcata aatcccgccg ttcggtatct
     3901 tgccgactgc ctgaaaaccg ccgtcgtggt cgctgtcgtg atgcgacaga accagcttgt
     3961 ccaaacggcg gacacccgcc gcattcaaac tcggcacaat ccccatctgc gccgccgctg
     4021 ccgttccggt gtcaaacaaa agatgatgat ttgccgtctg aaccgacacc gacaaaccct
     4081 gccccgcatc ccaaaccgta accgcaacct cattttccgg cacgccgggt gaacggtaaa
     4141 acacaaaccc tgccaacagc aacaccgccc acggacgcaa acccaagccg cgcggcagca
     4201 gcaacagcaa agcggcacac accgccaaca ccaacagcgg caaaggtgcg gaggcaacgg
     4261 caaactcggg cgacacatcg gcaagccaca ccaaaaaccg caaagtatat tccgccaaaa
     4321 atgcccccaa ctgttgcaaa ggcgcaaacg gcacgaccga acccagcaac gccagcggcg
     4381 tcaataccca agaaaaccac ggaattgcca ccgcattgac caaagggctg attaaaggca
     4441 gcgaagcaaa cagataaccg agcaaaacca gcgacaacac cgaagccgcc cactgcccgc
     4501 gcaaagcagt ttgccgtttt ccctcgtgca aacgccccga gcacgcccat atcagggccg
     4561 ccaccaaacc gaaagacagc caagtcccca cacccaagac cgccgacggg tcgaacagca
     4621 gcaccgccgc caacgcctgc caccacgtcg cccacgccga caatcttccc ctgcgccaag
     4681 cccacgcaaa cgccgccaac atcaaaacgc tgcgctgcgt cggcacggaa aaaccggcaa
     4741 gcagcgcgta aaacagcgcg cctgcacacc ccgccgccaa aacccacgcg cgcggccggg
     4801 caggaaggcg cggggaacag gcaagcagcc gcttcgccag ccacgcaaac attaccgcca
     4861 ccatcgtaac gtgcaaaccc gaaatactga ccaaatgcgt cagccccaac ggccggaacg
     4921 cctgccacaa ttcggggcgc aatgccgact gttcgcccac gctcaacgcg cgcatcagcc
     4981 cgatgccgtc tgaaagcccg ccgtccgcat ccgcctgctg ccaattacgg ctgatgcggc
     5041 tgcgccaaac cgcaatcccc caaccgcttc cgccatgcag caaaaccctg tccgcaccga
     5101 ccgtccccgc gccgcctatt ccgttggata atgcccacgc ctcacggttc aaaccgcgca
     5161 ggttcaactc cccgacgaca gggtgcacac gtgccgttat ccgccatctg ctcccgaccg
     5221 cccattcgcg ccgtttgtag tccgacagca gcaaatcaaa cgtccgacca ccgctgtcca
     5281 cagcctttgc cgcaaactgc acacgccgcc cgtccgacct cggcatatcc gccacttcca
     5341 ccgtcaaagg cacgcctgaa acggcttctg cccaccattg ggaagacaat gccgcctccg
     5401 tcctgaatac gccgtaagcc gcgcccgcca acacgcacag catcagaccg gcaaacgcaa
     5461 aacgccttgc aaacacagca aaaaccgcaa aagccgccag ccaaaacagc caatgcggca
     5521 cgaccggcag cgcgaacgaa gccgccgcac cgacaaccca acacggcaaa aaccaacgac
     5581 ggaacacgtc tccccacccc agatatttca aaaataaacg gataataaag caaatccgaa
     5641 aaaccgtcat aacaagattt gaaaatg
//
LOCUS       DAXHRP010000135         5666 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.135, whole genome shotgun sequence.
ACCESSION   DAXHRP010000135 DAXHRP010000000
VERSION     DAXHRP010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5666
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.135"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..282
                     /locus_tag="ACFM72_001721"
                     /pseudo
     CDS             1..282
                     /locus_tag="ACFM72_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153708080.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(481..621)
                     /locus_tag="ACFM72_001722"
     CDS             complement(481..621)
                     /locus_tag="ACFM72_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258263.1"
                     /translation="MPEYRNWQNGLNAKCADGDEYGVAQSDCRTREINAKTKEIQGYL
                     ID"
     gene            complement(666..1088)
                     /locus_tag="ACFM72_001723"
     CDS             complement(666..1088)
                     /locus_tag="ACFM72_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC6258264.1"
                     /translation="MALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEAARVSEWEE
                     RYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKVSEL
                     ACKTVETEARLEELYNRKKALIDEMVREADKKELPKRL"
     gene            complement(1231..2877)
                     /gene="pgi"
                     /locus_tag="ACFM72_001724"
     CDS             complement(1231..2877)
                     /gene="pgi"
                     /locus_tag="ACFM72_001724"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC6258265.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIVMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLINLYLQTNRK"
     gene            complement(2998..3846)
                     /gene="hexR"
                     /locus_tag="ACFM72_001725"
     CDS             complement(2998..3846)
                     /gene="hexR"
                     /locus_tag="ACFM72_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HFC6258266.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            complement(3896..4882)
                     /locus_tag="ACFM72_001726"
     CDS             complement(3896..4882)
                     /locus_tag="ACFM72_001726"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HFC6258267.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGTSPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            complement(4863..5558)
                     /gene="pgl"
                     /locus_tag="ACFM72_001727"
     CDS             complement(4863..5558)
                     /gene="pgl"
                     /locus_tag="ACFM72_001727"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HFC6258268.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
BASE COUNT         1200 a         1490 c         1557 g         1419 t
ORIGIN      
        1 ccggatgcct atctgcatga aatcgccaaa cattttgatt gtacggcagc caccgtttgc
       61 tatgcactca aacagatggg gataacgcgc aaaaaaaaga ccaccactta caaagaacaa
      121 gacccggcca aaataacgca ttatttgaca cagctggccg aattttccga ctaccaacgt
      181 gtttatttgg atgaaacagg atttgaccgc tacctgttcc gtccctatac ccgcagcctg
      241 aaagggcaaa tagtgaaagc gcagataagt ggaaaaagat atagtggatt aacaaaaatc
      301 aggacaaggc ggcgaagccg cagacagtac aaatagtacg gaccgattca cttggtgctt
      361 cagcacctta gagaatcgtt ctctttgagc taaggcgagc caacgatgta tcggtttaaa
      421 tttaattcac tataaaaacg acaaaaacgc aaaagccgcc gacattcccg catccaagtt
      481 tcagtcaatc agataacctt ggatttcttt ggttttcgca ttgatttctc tggtacggca
      541 gtcggattgt gccacgccgt attcgtcgcc gtcagcgcat ttggcattca gaccgttttg
      601 ccagttgcgg tactcgggca tgacggtttc ggcaatatcg gcgggcagtg cctgaaccgc
      661 gctgttcaga gccgctttgg cagttctttc ttgtccgctt ccctgaccat ttcgtcgata
      721 agggcttttt tacggttgta cagctcttcc aagcgtgctt cggtttccac cgttttgcat
      781 gccagttcgc tgacttttat gccgtttggc gtttcacctt cggctttcgc attgttggca
      841 cagattttgt ccataccgct tttccatgtt ttctgcgaag cttgcagttt attctgtaca
      901 gtttgcggca atcctttcca gaactgctcg aactcgctgc gcgacaactt gtagcgttct
      961 tcccattcgg atacgcgggc ggcttcctgc tcccgaccca atgcctcctg cgccgccgct
     1021 tcttctgccg cttcaagttc ttcgttcctt tgtttcgctt tgtccaacgg ctctttaatc
     1081 agtgccatag ctgcggaaca tatatgttta aatttatgca aaccatcata tcgggattgc
     1141 acacgctctg caagtttacc gacggttttc ctgttcgata aaaatgccgt ttgaaacggt
     1201 cggcgttcag acggcatttt tccgcaggtt ttatttgcgg ttggtctgca ggtagaggtt
     1261 gatcaggcgt tcggtcgaac tgtcgtgctt ttgcggcccg gtttcgccgg tcagttcgcc
     1321 caaaatggtt ttagccagtt gtttgccgag ttccacgccc cactggtcga agctgttgat
     1381 gccccaaatg atgccttgta cgaaggtttt gtgttcgtac atgacaatca ggctgcccat
     1441 attgcgcggg ttgaccttgt ccatgagaat gaggttggtc gggcggttgc cggagaaggt
     1501 tttgtgcggg accagctctt cgatgcgcgc ctcatccata ccctgcgctt tgagttcggc
     1561 gcggacttcg tcgggggttt tgccgcgcat aaaggcttct gcttgggcga agacgttggc
     1621 aagcaggatt tcgtggtgtc cgggcaggtt gctgcgtttt tcaagcgagg caatcaggtc
     1681 gatgggggta atgtgcgtgc cttggtgcag cagttggaag aaggcgtgct ggccgttaat
     1741 gcccgtttcg ccccagataa tcggcgaggt ttcgtgtccg actgctttgc cgtccaacgt
     1801 aacctgtttg ccgttgcttt ccatatcgag ctgctggatg aatttgggca ggcggtgcaa
     1861 atgttggtcg taaggcgcga tgacgtggct gccgccgccg tagtagttga tataccagat
     1921 gccgatgagg gcgagaatga cgggcaggtt gcgctcgagc ggtgtgttga tgaagtgttg
     1981 gtccatcagg tgcgcgccgt tgagcatttc gatgaagttt tcttcgccga gatacagcat
     2041 aatcggcaat ccgatggcgg accacaggct gtaccgaccg ccgacccaat cccaaaattc
     2101 aaacatattg gcggtgtcga tgccgaattc ggcgacggct ttttgattgg tggaaacggc
     2161 ggcgaagtgt ttggcaacgg cttcttcgtc gcccgcatga ttcaaaaacc attcgcgcgc
     2221 ggtcagcgcg ttggtcagcg tttcctgcgt ggtaaatgtt ttggaggcga tgatgaacaa
     2281 cgtggtttcg gggtggactt tggacaatac gtcgcgcagt tgcgagccgt ccacgttgga
     2341 gacgaagtgc atattgaggc gcggatgacc gaaaggtttg agcgcggtac acatcatcag
     2401 cggacccaaa tccgatccgc cgatgccgat gttgacaacg tcggtaatga cttggttggt
     2461 atagcccagc cagcttccgc tgcggacttc gtgtgcaaat tcgcccatac gttgcaaaac
     2521 gcggttgact ttgggcatca catcttcacc gtcaaccaca atcggcgaat tggtgcggtt
     2581 gcgaagggcg acatgcagga cggcgcggtt ttcggtggta ttgatttttt cgccgtggaa
     2641 catctgccgc atccgctccg gcacgcctgc ttctcgggca agctcgaaca aaagcgacat
     2701 ggtttcgtcg ttgatgcggt ttttggagta gtccagcgtc agtccgccga cttgcagcca
     2761 gtagcgttcc gcacgctgcg ggtcttgctc gaacatttcg cgcatatgca atgttttgct
     2821 gtcgtcaaag tggttccaca atttcgacca tgcgggtaag tcgtgaaggt gtttcatcta
     2881 tatgctcctg aatgaggttt tttgttgtgg gatgaaaagg ctgccggaaa ctgccgcaag
     2941 ccgccgacga ccgttgttcg gcatttcaga cggcatttgt gggatgccgt ctgaaggtca
     3001 atctttgtcg taatcgatgt gcttgttgtg tatgcttttt ttgcttttct gcaattgcag
     3061 gctggcagca tcgcccaagc gcagggcaag tccgatggcg agaatgtcga tgacggcaag
     3121 ctgcaagagg cgggaaacca tgggcgtgta gagttcggca ttttcctgtg tggcaacgct
     3181 caacacgcag tcggcaagtt gcgccagagg cgaatcgttg cgggtcagtg cgatgacaga
     3241 cgcgccgttt tctttggcga tgctgaccgc atccaaaagt tcgatagacg aacccgtgtt
     3301 ggaaatggca accaaaacat cctgatcgct caaaacagat gccgccatca gctgcgtgtg
     3361 cgtatcgaca taggcgacgg tggacatgcc gaaacggaaa aatttatgct gcgcgtcctg
     3421 tgccacaatg ccggaattgc cgacaccgta aaactcgacg cgacgggcgt gcatcagcgt
     3481 ggcaatggcg ttttccagct ccgactcttt caggaagcgg cgttcgccca acagcgaggc
     3541 ggcggcattg cccaacactt tctcgaccac gcttgccata tcgtcgtcgg cgttgagttc
     3601 ttcgtggaca tagggcatac cctcatgacc gatgctggcg gacaaggcga gcttgaactc
     3661 gggcagccct ttataaccca agctgcggca gaatcggatg acggtcggct ggctgacgga
     3721 cgcacgttcg gcaatttcgg caacggcggc atggacgaac catttgggtt ccgccaatgc
     3781 acattcggcg actttgcgtt ccgcaccgga aaggtttgcc agtgattcgc tgattttgct
     3841 taacataatg atatgccctt cgataatgca gccccgctgc aaggagccgc tgtggttaaa
     3901 cgtttctcaa atggttgtca agagccgcag ccgcaccgga aattccggga aactcgctca
     3961 agacgacata cacgggaatc gcggcaagat atgcttcaaa cctgcccttg ttctcgaaac
     4021 ggctgcggaa cggggaagtt ttgaagtatt ccaacacgcg gggaataatg ccgccgcaca
     4081 ggtacacgcc gccgcgcgcg cccagcgtca gggcgaggtt ggaagcaacc gtgccgagca
     4141 tggcgcagaa gatgtccaaa gtctgacggc acaaaggcga cgtgccgctc aaagcctttt
     4201 ccgtgatttc agacggcatc agtttggcgg gtttggcttt ctgttttgca gccaaagcct
     4261 cgtaaaccaa gctcaagccc gcgccgctca aaaagcgttc ggcggaaaca tggccgtatt
     4321 tgtttttggc gtactgccaa atcagcactt ccatatcgtc aaacggcggg aaactggtat
     4381 gcccgccctc gcccgccaaa gccacccagc ctgcgtggct gtgcaccaat ccgctcacgc
     4441 ccaggccggt accggggccg ataacggctt tgggggcaaa ttcgacaggc ttttgcccgc
     4501 ctacctgcat caggtctttg cttgaagtct gcgttaccgc caatgcctgc gcggtaaagt
     4561 cgttcaaaag gatgagggtg tccagcccca aagtctgacg ggtggtttcg atggaaaacg
     4621 cccaatggtg gttggtcatc tgcacccagt cgcccaaaat cgggttggcg atggcaaatg
     4681 ccgcgtgccg tacggctgtt gcaccgcttt gattcagata ggcacgcacc gcatcggtaa
     4741 ccgtatcgta gtctttacac ggaagcacgg cggctttttc aatgacgcgc ggcgcggttt
     4801 ccagcgcaaa gcgtgcattc gtcccgccga tatcggcgac cagtcgggga tatccggctt
     4861 gtttattcgg cgtagaagac atggcagttc actccttgat ggttcaaaac gaggttgatc
     4921 ggatattcgc ggttttcgcc ttgtgcggct tggtcgaaca cggctttttt ctcttcgccc
     4981 cgtatcgcca aaaacacatg ccccgtatgg gcaatcgcat ccaaggtcat actgacgcgc
     5041 tcgtgcggcg cggtaacggg cgtggtatgc accagcgcga cacctgccga accgtcgatt
     5101 gccgtctgaa actgcggagc tttcgggaaa atcgaagccg tatgcccgtc gtttcccata
     5161 cccaaaacca aaacatcggg ctgtttgtaa tgtttcagtg cataatcgac aacagcatcg
     5221 ggatgtaatt cggtttcagt ttttccgtct tccaccatag gaatccacat tgccgcttcc
     5281 gctttgttct tcaacaggta ttcgcgcacc aaaccggtat tgctgtcggc gtggacggtc
     5341 ggcacgatgc gttcatctgc caaggtgatg ccgacgtttt tccaatccaa atctttttgc
     5401 gacagggcgt tgaaaaatgc aatcggcgaa cgtccgccgg aaactgccaa caccgcaccg
     5461 cccttctcgt ccagtgcgcc ctgcaaagca tccgccactg cgtcagccaa agactgcgcc
     5521 gcttctgccg cattttcgta ttcgtgccaa acaaacatat ttgtgtcctt tttttatttc
     5581 agacggcata ttccgttatg gaaacgggtt gagcaatatg tcggccgaac agttgtttat
     5641 gcttttgata ccaaatatcg ggactg
//
LOCUS       DAXHRP010000136         5588 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.136, whole genome shotgun sequence.
ACCESSION   DAXHRP010000136 DAXHRP010000000
VERSION     DAXHRP010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5588
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.136"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            93..1496
                     /locus_tag="ACFM72_001728"
     CDS             93..1496
                     /locus_tag="ACFM72_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC6258269.1"
                     /translation="MNNPDLPYRQALECLSQKQYNFTEVRRLLTEAFSAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETA
                     HLLYRKAAAQGLAAAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDIYRYGLGMTSDKEKALHYYRQAAEAGSLAAYQKLISDSALNHPDQYGGIK
                     DSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEAINNGY
                     GQKSVLQELLQQWQNAV"
     gene            1618..2334
                     /gene="trmB"
                     /locus_tag="ACFM72_001729"
     CDS             1618..2334
                     /gene="trmB"
                     /locus_tag="ACFM72_001729"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HFC6258270.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTAAQQRAIDTLWG
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(2964..3326)
                     /locus_tag="ACFM72_001730"
     CDS             complement(2964..3326)
                     /locus_tag="ACFM72_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258271.1"
                     /translation="MSQLDFNLELFIKNSNFDDYKIFDIVKEAIETQDEIGSILRTHL
                     FFERILEAWIYAKCNKEDFFNDTQIGFRTKLKIARNLGLFSEVYDIGERLNKIRNTIA
                     HHVLREVNQENLTLYMKV"
     gene            complement(3439..5538)
                     /gene="uvrB"
                     /locus_tag="ACFM72_001731"
     CDS             complement(3439..5538)
                     /gene="uvrB"
                     /locus_tag="ACFM72_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HFC6258272.1"
                     /translation="MPSERRFRPIPTARFVRKRITGKIMEVIQYPNSPFKLHQPFPPA
                     GDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQ
                     LYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNL
                     MTRNDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDF
                     KRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPS
                     SHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCK
                     GIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLV
                     DYGFRLPSARDNRPLKFHEFEKVMPQTIFVSATPAKYEEEHAGQVVEQVVRPTGLVDP
                     QIIIRPVATQVDDLMSEINDRIEKGERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSD
                     IDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQ
                     TIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQIKFNEEQGIVPQQIKKQVKD
                     IIDGVYHEEDGSKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAV
                     LRDRIRDIKENLLFGAE"
BASE COUNT         1409 a         1422 c         1390 g         1367 t
ORIGIN      
        1 ttcgtcgcct tgtcctgatt tttgttaatc cactataaac ctaacttcat aacacaataa
       61 cgatgattcg acaaaacgga aaacgatctg acatgaacaa tcccgactta ccctatcggc
      121 aggccttaga atgcctgtct caaaaacaat ataactttac cgaagtccgc cgactgctga
      181 cagaagcgtt ctcggcaggt catcccgccg ccgcattcga gttggcaaaa cacctgatgg
      241 acgcggacag cccctaccaa gaccgcgaac aaggtatgga aatgctccgc atcgccgccg
      301 aacaggggca tccctatgcg cgttacaatc tggcatatat ccaagaattg gaaggcgcgc
      361 ccccggaaac cctgataccg ctttacagac cgttggcaga ggaaggactg cctgaagcac
      421 aagtccgcct gatgtacctt ctgtatgcgt cccgacattt tgaagaagcc ctgaaatggg
      481 caaaaacaag cgcaaaaaac aacaaccccc acgggcaata cctgcttgcc caatactgcc
      541 ggtacggcac gccgccggat tttgaaacgg cgcacctgct ctaccgcaaa gcggcggcac
      601 aaggcttggc ggcggcacac tggcagctcg ggctgcaata ccgtttcgga caagggacga
      661 aagtcgacac ggcacaggcc gtcaatcatt tgcgcgccgc cgcacaacaa ggatacattc
      721 ccgcctacac cccgcttgcc gagctcatcc tacctacggc tcctgatgaa gccgttcact
      781 ggtttcaaca ggcggcacag gaaaatgacc ccgatgccca tgccgcactt gccgacatct
      841 acctgcaagg caagcatccg gaaagaaact acaaacttgc cctgcatcac gccgaagcag
      901 cagccgccga acgccatccc gaaggtttgc ggatactggg cgacatctac cgctacggac
      961 tgggcatgac ttccgataaa gaaaaagccc tgcattatta ccggcaggca gccgaagccg
     1021 gcagccttgc cgcgtatcag aaactcatat ccgacagcgc gttaaaccat cccgaccaat
     1081 atggcggcat taaagattcc gccatcaggc ggcaaagggc agaacggctt tatcaaaaag
     1141 cccaagccct gcattacgga ttacaatgcg cgcccgaata tgcagccgca ctcaaactct
     1201 acacagaagc cgcagaactc ggccacagca aagcccaaac caatctgggc agcatgtatt
     1261 acttcggaca gggtatgacc gccgactaca atgaagcacg caaatggttt gaaaaagccg
     1321 ccgcgcaaaa agacagcatg gcactttata acctcgcctg catccattac aacggacacg
     1381 gcgtcgagcc ggacaaagaa aaagcctgcc gctacctgca agaagccata aacaacggat
     1441 acgggcaaaa aagcgtcctg caagaactgc tgcaacaatg gcaaaatgcc gtctgaacag
     1501 cgttacacct accctgccga aacgaaacag gtataatcgc ccctttcctt tcccgccgtc
     1561 cgaacaggcc tttcacattc agacggcatc ctgattgcac aagcgcacga aagcattatg
     1621 acagacaccg ccgaaaacca aacacaaaac aactggcaag ccgaacaccc ccgcagcatc
     1681 cgcagtttcg tcctccgcca aagccacatg accgccgcgc agcaacgcgc catcgatacc
     1741 ttatggggca gcttcggcat cgactaccaa gcaacaccgg ccgatcttga tgcccgtttc
     1801 ggaagcagcc gacccaaaat cctcgaaata ggcttcggta tggggacggc aaccgcagaa
     1861 atcgcccgca ggctgcccga aaccgacttt cttgccatcg acgtacacgg tcccggcgta
     1921 ggcaatctgc tcaaactcat agaagaaaac catttggaaa acatccgcgt gatgcggcac
     1981 gacgccgtag aagttgtcga aaatatgctg caagacggct cgctcgacgg catccacata
     2041 ttcttccccg acccgtggca caaaaaacgc caccacaaac gccgtctgat acaagccccc
     2101 ttcatcgcca aactgctgcc caaactcaaa accggcggct atatccacct ggcgacagac
     2161 tgggaagaat atgcacagca gatgcttgaa gtcctcagca gcttcgacag cctgcaaaat
     2221 acggcggcag actacgcccc caccccggac taccgccccg aaaccaaatt cgaagcgcgc
     2281 ggcaaacgcc tcggacacgg cgtttgggac ttggtattca aacggatcgg ataacaaacc
     2341 gccggataaa aaaatgccgt ctgaagcatg tttgcttaca gacggcattt tttcaagata
     2401 aagcagcaag tgatgtttcg atataaagtt taaaacaata gtttgaacgg caaaacgcgt
     2461 gtgtaccgca cgcatcctta taggttttat gcacatcggt tttaaagttt gtgccgcccg
     2521 caggtagtat gtgatagcta cgcacgcggt tggtgtgatg taggctacgg cttgctggtt
     2581 acaaccgtaa aaaagtaagt gccgccattg cggtaaaaac gaagggattt catagtgtta
     2641 tgctcgtaat gattttgtag attggattct cgaatccgac cttttgggca ttgctgcaat
     2701 ggattgcaac gacgggaatg ttgaaggttt tgtcggatac aagtatccga cctacgcttg
     2761 ttgctatata tcttttgatt taatgactaa atatgacaaa gttaaagtgc agattacagc
     2821 aagcatgata tgcttcttta ggcttttatc attccatgat atagatattt cttccttttc
     2881 attttcttta taaaatttta aacctatatc accatttttc cattcctggt ggtttactat
     2941 gattttattt ttaaaagaat ctcttaaact ttcatgtaaa gagttaaatt ttcttgattt
     3001 acttccctta gtacatggtg agcaattgta tttctaattt tatttaatct ctcccctata
     3061 tcatatactt cgctaaataa gccaagatta cgcgcaattt ttagttttgt gcgaaatcca
     3121 atttgtgtat cattgaaaaa atcttcttta ttacattttg catatatcca tgcctctaaa
     3181 attctttcaa aaaataaatg tgttcgtaag attgaaccta tttcatcctg tgtttcaata
     3241 gcttctttca cgatatcaaa aatcttataa tcatcaaaat ttgaattttt aataaataat
     3301 tctaaattaa aatctaattg agacataata agtgcccatt tcaaaaataa atctatattc
     3361 tagttaatat aatagttatt ctaatatcta aattaaataa taaactacta tttttatatc
     3421 cacgacaaag tctaagtctc actccgcccc aaacaacaaa ttctctttaa tatccctaat
     3481 cctatcccgc aacacagccg cctcttcaaa ctgcaaatcc ctagccgcct gctgcatggc
     3541 tttttcgagt ttggcgattt ctttaatcgc atcttcttcg ttgtgaatct cgcccacttt
     3601 aaccttgttt ttacctttca gacggccttt actgccgtct tcttcgtggt acacgccgtc
     3661 gatgatgtct ttgacctgtt ttttaatctg ctgcggcacg atgccctgtt cttcgttgaa
     3721 tttaatctgt ttttcacggc ggcgttcggt ttcgtcgata gcggctttca tggagtcggt
     3781 aattttgtcg gcgtacagga tggcgacgcc gttcacgttg cgcgcggcgc ggcctatggt
     3841 ttgaatcagg ctgcggtggg agcgcaggaa gccttcttta tctgcgtcga ggatggcgac
     3901 gagagagact tcggggatgt cgaggccttc gcgtaagagg ttgatgccga cgagtacgtc
     3961 aaacaggccg agccgtaaat ctctaatgat ttcaacgcgc tcgacggtgt cgatgtcgct
     4021 gtgcaggtag cgcactttga taccgagttc gctgtaatag tcggtgagtt gctccgccat
     4081 gcgtttggtg agggtagtaa cgagtacgcg ttcgcctttt tcaatgcggt cgttgatttc
     4141 gctcattaag tcgtcgactt gggtggcaac ggggcggatg atgatttggg gatcaaccag
     4201 ccctgtgggg cggacgactt gttcgaccac ttgtccggcg tgttcttctt cgtatttggc
     4261 gggggtagcg gaaacgaaga tggtttgcgg catgactttt tcaaattcgt ggaatttgag
     4321 cgggcggttg tcgcgggctg aaggcaggcg gaagccgtag tcgacgaggt tttgcttgcg
     4381 cgatgcgtcg cctttgtaca tgccgccgat ttgggttacg gtaacgtggc tttcgtcgat
     4441 gaacatgatg gcgttgtcgg gcaggtagtc catcagcgta ggcggcggtt cgccttcttt
     4501 tttgccggaa aagtggcggg agtagttttc gattcctttg cagaagccca tttcgtagag
     4561 catttcgagg tcgaaacggg tgcgctgttc gatgcgttgt tgttcgacgg ggcgttgttc
     4621 gcgggcgaaa aattcgatgc gttcgcgtaa ttcttctttg atggactcgc aggcgcgcaa
     4681 gacggtgtcg cgcggggtaa cgtagtggct ggacgggaag acggtgtagc ggccgacgcg
     4741 ctggataagg ctgcctgaaa gcgggtcgaa catatcgagg cggtcgattt cgtcatcaaa
     4801 caggctgatg cgtaaggcgt tttcggagct ttcggcgggg tacacgtcaa tcacgtcgcc
     4861 gcgcacgcgg aagctgccgc gtttgaagtc caaatcgccg cgttcgtatt gcatggaaac
     4921 gagcgtggcg atgatgtcgc gctgctcgat ggtatcgcct tctttgacgg acaacaccat
     4981 ttgttgatac tcggtcgggt cgccgatacc gtaaatggcg gacacggtgg cgacgataat
     5041 cacgtcgttg cgcgtcatta ggtttttggt ggcggaaagg cgcatctgct cgatgtgttc
     5101 gttgatcgcg ctgtcttttt cgatgaacaa atcgcggctg ggcacatagg cttcgggctg
     5161 gtaatagtcg tagtaggaga cgaaatattc cactgcgttt tcggggaaaa attcgcgcat
     5221 ttcggcgtaa agctgggcgg caagggtttt gttgtgcgcc atgatgatgg cggggcggcc
     5281 gctttgggcg atgacgttcg ccatggtgta ggttttgccc gaaccggtta cgccgagcag
     5341 ggtttgatag gcaaggccgt ctgaaagccc ttcgagcagg cctgcaatgg cggtgggctg
     5401 gtcgcctgcg ggcgggaagg gttggtggag tttgaagggg gaatttgggt attggataac
     5461 ttccataatc ttgcctgtga tgcgtttgcg gacaaagcgt gcagtaggga tgggtcggaa
     5521 acgtctttca gacggcataa ggcggtgaaa tcctgaatgt atgccgtctg aaacccaatc
     5581 gctaccca
//
LOCUS       DAXHRP010000137         5551 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.137, whole genome shotgun sequence.
ACCESSION   DAXHRP010000137 DAXHRP010000000
VERSION     DAXHRP010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5551
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.137"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(43..810)
                     /locus_tag="ACFM72_001732"
     CDS             complement(43..810)
                     /locus_tag="ACFM72_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFC6258273.1"
                     /translation="MSSNKASIFTRLHRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGALAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVAGDADVAV"
     gene            complement(898..1725)
                     /gene="mutM"
                     /locus_tag="ACFM72_001733"
     CDS             complement(898..1725)
                     /gene="mutM"
                     /locus_tag="ACFM72_001733"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HFC6258274.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPRCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1777..2442)
                     /locus_tag="ACFM72_001734"
     CDS             complement(1777..2442)
                     /locus_tag="ACFM72_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFC6258275.1"
                     /translation="MDSWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRRLADVGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     VAD"
     gene            2621..4597
                     /locus_tag="ACFM72_001735"
     CDS             2621..4597
                     /locus_tag="ACFM72_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC6258276.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHKISASPQHTAAADGKRRIRLETRIAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4665..5357
                     /locus_tag="ACFM72_001736"
     CDS             4665..5357
                     /locus_tag="ACFM72_001736"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HFC6258277.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLKNPTTLLLTITEGKYHQVKRMIAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
BASE COUNT         1453 a         1784 c         1200 g         1114 t
ORIGIN      
        1 tccacaaaag cgaatcatac tgccacattc tgacaaccag tttcagacgg caacgtccgc
       61 atcgccggcg acaacggcac ggatgctttc ttcgatttta tcttttaaag cataacggtc
      121 ttcgctttcc gccgcatccg ccacgcaaac gaaatcgact tttatcgtta attttttcat
      181 agacacaatg cgccacaggc aggtcggcaa accgacatcg gcatatgagg gacgagccgt
      241 cctttttccc gtttcgtcat aataacgcag cgcgaccgcc aaaacctttg cccccgcatc
      301 gatggcggat tggaacagcg cggctttgaa cggcaggagc cccaatccgg aggaagtccg
      361 cgcttcgggg aaaaaactga cgttttgacc gcgttgcaag gtttcgcaga cggcgcggtt
      421 aatcggttcg atgtcgcgcc gcgaattgcg gttgatgaac accgttcccg cgttctgccc
      481 catcttgccc aataccggcc agcttttgat ttcctgcttg gcgataaagc tgctcggata
      541 aaccgcgctc atcgcgaaaa tatccagcca ggacacgtgg ttggcggcaa ccaagacacc
      601 gttcggatgt tcgggtgcgg gcctgcccac ctccaatccg atatccaaag ccgccagagc
      661 ccccctgccc aactcgatta ccgcccgatt gcgcgactcg gggcagccgc cgtcaatacc
      721 gcgcaggttt ttccctgttt taaacagcca gaccgccaaa cggcacaacc gatgcaggcg
      781 tgtaaaaatt gaagctttat ttgaagacat gagcaattct ttcccgataa tcggtgtttg
      841 ttattgaaac gttcagacgg cataccgata aaatgccgtc tgaaaccgtt ttcagcccta
      901 tttctgacag ttcgggcaat aaaacgtgcc gcgctgcccc aaagtttctt tcacaaccaa
      961 accgccgcac cgggggcacg gctgattgtg ccgcccgtac accgtatatt cctgttggaa
     1021 gtagccgctt ttgccgtcac tgtccacaaa atccctcaag gtgctgccgc ccgtttcaat
     1081 ggcgcgctgc aacaccgctt tgacggtttc aaccaaaagc gcgcactctt tctttttcag
     1141 gcggttggca ggacggtggg gcgaaatgcc cgccctaaac aggctctcgt tggcataaat
     1201 gttgcccaca ccgaccacga ccgcattgtc catcagggca agtttgaccg cgcgtttctg
     1261 cgctttcagc ctcacataca gataatccgt gcaaaatgcc tccgacaaag gctccggccc
     1321 cagtttttcc aacagcggat gatgttcttc gattccctca taccaaagta tcgcgccgaa
     1381 ctttctcgga tcgcggtaac gcatgaccgt gccgtctgaa aacacaatat cgacgtgatc
     1441 gtgtctgtcc ggcctgccga tacgtccgtc cgacggcgta aaaatccgca agctgcccga
     1501 catccccaag tgaatcagca gcacgcccgt ttgaaagcgg ataagcaggt atttcgccct
     1561 cctgccgcag gacaacacct gccggccgga caaaatctcc cccaaatcgg gattaatctg
     1621 ccagcgcagc ttcaattggc gcaataccac ggcttccacc gttttccctt caatatgcgg
     1681 cgcgatgccg cgcaacgtcg tttccacttc cggcaattca ggcataaccc ctcccgacat
     1741 ttcttctgac agatgccgtc tgaaagacgg ctgtccctaa tccgcaaccc ttgccgcacc
     1801 cgccgcaagg gctttgccgc ccaaataccc gtcccacgcg ggcaggggcg ttacgcccgc
     1861 cgcccttttg accaaaacca aaccgtacac tgcggcacac tgcggccacc aacggtcgcc
     1921 cgccttttcc ataaaccgcc aaaagcgtat ttgcccgagc gacgaaacgg gcggcagata
     1981 caccataaat ttcccaaatt caatatcgaa accgacatcc gcaagccgcc ttttcaactc
     2041 gggcagcggc agacagaagc gtttttccgg caggcgttcg ccgtcaaacc aacggctgaa
     2101 tccccagagc gaatacggat tgaaacccgt cagcatcaaa cgtccggacg gtttcaatat
     2161 ccggtgcgcc tcggacagga tttgcgaagg aacaccgcct tcaagcgtat gcggaaaaag
     2221 cagcatatcc gcagaaacat ccgccaaagc catattttcc gccgacatcg acatatctcg
     2281 cggcacacag acaacatctt cagacaggct cagccacgga ccgcccacct gaaccgcaca
     2341 cattcccgaa aaacggtatg aatccagata ccgcccgaag aaatcctgtt ccaattttgc
     2401 aacataccgc cccatcgccg tatcttcaaa ccatgaatcc atattgcgtc cgtttcaaac
     2461 agattgcctg ccgatattct attccaaaca ggatttctgt caaaaaacac atcggccgcc
     2521 catttccgaa tccgcataaa gttcctgtaa aacttgacgc tttttcagtc aaacagtacc
     2581 atcggacgat aaaatatgtt tattccgccg aatataaatc atgtccaaac tcaaaaccat
     2641 cgctctgacc gcatcaggtc tgtccgtttg tccgggtttc ctatacgccc aaaacacctc
     2701 atcacaccaa atcggtttgg cgattatgcg cttaaactct tcaatactcg acctgccccc
     2761 gacaaaacaa tatttccaat ccggcagcct gtggagcgag ctgcgccaag gcttccggat
     2821 gggcgaagtc aatcccgaac tggtacgccg ccacgaaagc aaattcatcg caagccacag
     2881 ctatttcaac agggtcatca accggagtag accctatatg taccatatcg ccaacgaagt
     2941 caaaaaacgc aatatgcccg ccgaagccgc cctgcttccc ttcatcgaaa gcgcgttcgt
     3001 caccaaagcc aaatcacacg tcggcgcatc aggattatgg cagtttatgc ccgctaccgg
     3061 caggcattac ggcctggaaa aaacaccggt ttacgacggc aggcacgacg tttacgccgc
     3121 caccgatgcc gcactcaact atctgcaata cctctatgga ctgttcggcg actggccgct
     3181 tgcctttgcc gcctacaact ggggtgaagg caacgtcgga cgcgccatca accgcgcccg
     3241 cgcccaaggg ctcgaaccga cctacgaaaa cctgcgtatg cccaacgaaa cgcgcaacta
     3301 tgtccccaag ctgctcgccg tgcgcaacat tattgccact ccccaatctt tcggcatgaa
     3361 tatcagcgac atagacaaca aaccctattt tcaggcagtc gaaccggatc gtccgctcga
     3421 caacgaagcc atcgcccggc ttgccggcat cacgcaaagc gagctgctcg ccctaaaccc
     3481 cgcattcaac gtccccgcgt ttatccccaa aagcaaacgc aaactgctgc ttcctgtcgc
     3541 gtccgtacaa accttccaaa gcaactacct caacgccgca cccgacagcc tgttttcatg
     3601 ggaagtctat acgcctgccg ccaaaaccag cctgtccgac atctcgacgg caaccggcat
     3661 gagcattgcc gacatcaaac gcctcaacaa cctgaacggc aaccttgtca acgcaggacg
     3721 cagcatcctt gtcgccaaga acggcaaaac ccttcagacg gcatcggaat ccgtcgtttc
     3781 catcgacatc gacaatacgc ccgacaccta ccgttccaat atgccggcag gcacggtgaa
     3841 cgtcggcatt gcccgaatcc gacccgccgc cgcacagaca gcggacatta ccgtcgcacc
     3901 tttgccgcag aaaaccgtcc gtacggaacc cgatcccctt gtccgtattg ccgaacctgc
     3961 ccttgcgaca gccgcagcgc aacctcaaac cgaaaaacag accgccatgc cgtctgaaac
     4021 ccaaaccgca acactcgcgc agatcatccc ccaaaacgac atgcaggcgg cagacgaact
     4081 catgcagctt gttgcccgaa acaacctgcg ccgacaggct gaagaaacca tctccgccgt
     4141 catcggcacg cctgacacag ttgccgaaca caaaatttcc gcatctccgc aacataccgc
     4201 tgccgccgac ggcaaacgcc ggatacgttt ggaaacacgt atagccaaag ctgccgacgg
     4261 cgaagccgaa atctccccgc tccatgccag catccaccgc gttgtagaag gcgacaccct
     4321 gttcaacatt gccaaacgct acaatgtcag cgtagccgac ctgattgtcg ccaacaacat
     4381 caaaggcaac accatccaaa aaggacaggt actccgcctg gcgcaggcag cccccgccca
     4441 aacccgtatt gaaaaagtat cctacaccgc gcgcaaaggc gacaccttca aaagtatcgc
     4501 cgcgcgcttc aatatccata tcgacgacat ccgccggctg aatcccaacc tgaacaccat
     4561 caatccggga cagagggtca aactgattgg aagctgattc ggatacggca catgacagga
     4621 ctttctcagt cccgtctttt tcatcccaca tttcccatac catcatgaaa ctcatcaaat
     4681 acctgcaata tcaaggcata ggaagccgca agcagtgcca atggctgatt gccggcggtt
     4741 atgttttcat caacggaacc tgcatggacg acaccgatgc agacatcgat tcctcatccg
     4801 tcgaaacgtt ggatattgac ggggaagcag taaccgtcgt tcccgaaccc tatttctaca
     4861 tcatgctcaa caagcctgaa gattacgaaa cttcgcacaa acccaagcac taccgcagcg
     4921 tattcagcct gttccccgac aatatgcgga acatcgatat gcaggcggtc ggcaggctgg
     4981 atgcggatac gaccggcgta ttgctgatta ccaacgacgg caaactgaac cacaacctga
     5041 cttcgccgag cagaaaaatt cccaagctat acgaagtaac gctcaaacac cccacaggag
     5101 aaacgctctg cgaaaccttg aaaaacggcg tgctgctcca cgacgaaaac gaaaccgttt
     5161 gtgccgccga tgccgttttg aaaaacccga ccaccctgct gctgaccatt accgaaggaa
     5221 aataccacca agtcaaacgc atgatcgccg ccgccggcaa ccgcgtgcaa caccttcatc
     5281 gccggcgatt cgcacatctg gaaacagaaa acctcaaacc cggggaatgg aaatttatcg
     5341 attgtccgaa attctgaaat aacatccaag aattccattt atattcatcc acatactcat
     5401 taaatatatg gtttaaccca atttaacgca aaaaatcaat ttacgatata atccatttgt
     5461 ctgagtaacg cctgttcaag caggcttatg agtaagacgt tttccccgta atgtgttttg
     5521 ccatctatac ttctcccctt gtatagatgg t
//
LOCUS       DAXHRP010000138         5537 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.138, whole genome shotgun sequence.
ACCESSION   DAXHRP010000138 DAXHRP010000000
VERSION     DAXHRP010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5537
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.138"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..77)
                     /locus_tag="ACFM72_001737"
     CDS             complement(<1..77)
                     /locus_tag="ACFM72_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC6258278.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTART"
     gene            complement(383..1642)
                     /gene="rho"
                     /locus_tag="ACFM72_001738"
     CDS             complement(383..1642)
                     /gene="rho"
                     /locus_tag="ACFM72_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HFC6258279.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTSNYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="ACFM72_001739"
     CDS             complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="ACFM72_001739"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HFC6258280.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4658..5479
                     /locus_tag="ACFM72_001740"
     CDS             4658..5479
                     /locus_tag="ACFM72_001740"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HFC6258281.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
BASE COUNT         1170 a         1306 c         1611 g         1450 t
ORIGIN      
        1 gttcttgcag ttacacctgc gacaaatagc tcaatgagtt tattttgttt ataccggctt
       61 agacgacttt ttctcataaa ggcaactcta acttaatttg aatttcccta gttatctagg
      121 acagccccaa atttatacaa aaatgagcgc ggttcggcgc aaccttgaat caagttcccg
      181 catcggtttt cattgccggt acggatgcgt tcaagccggc tttgcaaagg ccgcgctttc
      241 ggcaagcgga cacggacact gccgacggtt gcgccgttaa cggggggagg gaggagctgc
      301 gccggccgtg tgaatgaaag tgccgtctga aacccgattt tcaggcttca gacggcattt
      361 cgcattaatg cgggtggcgc gtttatttgc cgcgcatcag ttcaaagaaa tcatcattgt
      421 ttttagaggc tttgattttc ccgattaaaa attcggctgc ctcgatttcg tccatcgggt
      481 gcaggaactt gcgtaagagc cacatacgtt gcaactggtc gttcggcaca agcagctctt
      541 cgcggcgcgt gccggatttg ttgatgttga tggcggggaa gaggcgtttt tccgccatac
      601 ggcggtcaag gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt
      661 ccatacggct gccggtttca accaatgcgg tggcgatgat ggtcagcgaa ccgccttctt
      721 ccacgttgcg cgccgcgccg aagaaacgtt tggggcggtg cagtgcgttg gcatcgacac
      781 cgccggttag gattttgccc gaggtaggca cgacggtatt gtaggcgcgg gcaaggcggg
      841 taatcgaatc cagcaggatg accacgtctt ttttgtgttc taccatacgc ttggcttttt
      901 caagcaccat ttcggcaact tggacgtggc gttgcgccgg ttcgtcaaag gtggaggaaa
      961 ccacttcgcc gcggacggaa cggctcattt cggttacttc ttcgggacgc tcgtcaatca
     1021 agaggacgat gagttcgact tcgggatagt ttgaggtaac ggcgtgggca atgttttgca
     1081 gcatcacggt tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga
     1141 taggggaaat caggtcgatg gcacgtccgg tcaggttttc ttcggacttt aagtcgcgtt
     1201 ccagcttcaa ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc
     1261 ggcatacttc cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt
     1321 cgttgtcttt tgggacgcgc acgcttcctt cgatggtgtc gcccgtatgc aggttgaagc
     1381 ggcggatttg ggtgggcgag acatagatgt cgtcggggcc ggcaagatag gacgtgtccg
     1441 cgctgcggag gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtaaaac
     1501 cctcgccttt tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc
     1561 ggttggcgtt ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg
     1621 tttgtaattc ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga
     1681 tgccgtctga aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc
     1741 agtcggcgcg tgggtgtcaa atattatcgc ggacggggca tcggcaggaa atgccgtctg
     1801 agcggagctg cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg
     1861 attatttgtt caattcattc gccaaatata gccaagtttc gatgacggta tccgggttca
     1921 gggaaacgct ttcaatgcct tcctcaacca gccatttggc gaagtccgga tggtcggacg
     1981 ggccttgacc gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaaggt
     2041 gcagcatcac tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt
     2101 cgcggtcgag accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga
     2161 agtattgcag gaattgttcc gccaataccg cgttgctcgg cagctcgcac atcataatca
     2221 ggcgcaggcc gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt
     2281 cggcttcgcc caaagtgcgg acgaacggaa tcatgatttc aacgttggtc aaccccattt
     2341 catcgcggac gcgtttcaag gctttgcatt ccaaggcgaa acagtctttg aagttgtcgg
     2401 cgacataacg cgccgcacca cggaagccca acatcgggtt ttcttcatgc ggttcgtata
     2461 cgctgccgcc gaccaggttg gcgtattcgt tggatttgaa gtcggacata cggacgatgg
     2521 ttttacgcgg ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt
     2581 agaagtcgac aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt
     2641 catcttgttt gtcaaattcc aacaaggctt tcgggtggat accgatttgg cggttgatga
     2701 taaattccat acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga
     2761 gttcggggtt gccgacgttc atcatgactt tgacgggtgc tttgggcata ttgtccaagg
     2821 cgacatcggt aatttgtacg tccaacagac cggcatagat gaagccggta tcgccttcag
     2881 cacaggatac ggtaacttct tgaccgtttt tcagcaattc ggttgcattg ccgcagccga
     2941 caacggcagg aatgcccagt tcgcgcgcga taatcgccgc gtggcaggtg cgtccgccac
     3001 ggttggtaac gatggcggaa gcccgtttca tcacgggttc ccaatccgga tcggtcatgt
     3061 cggtaaccag tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc
     3121 gtactttgcc ctgtccgact ttctgaccga tggcacggcc ttcgcataat acggtttttt
     3181 cgccgttgat ggcgaagcgg cgcaggttgc ggctgccttc ttcctgggat ttgacggttt
     3241 cgggacgggc ttgcaggatg tagagtttgc cgtccaagcc gtcgcgtccc cattcgatgt
     3301 ccatcgggcg gccgtagtgt ttttcgatgg tcagtgcgta atgcgccaac tcagtgattt
     3361 cttcgtcggt aatggagaag cggttgcggt cttcctcggg gacatcgacg ttggttacgg
     3421 atttaccggc ttctgctttg tcggtaaaaa tcattttgat gtgtttcgaa cccatggtct
     3481 tgcgcaggat ggcgggcttg cccgctttga gcgtgggttt gaacacataa aattcgtccg
     3541 ggttgaccgc accttgtacg acgttttcgc ccagaccgta agaggaggta acaaagacga
     3601 cttgatcgta gccggattcg gtgtcgaggg tgaacatcac acctgatgcg ccgctgtcgg
     3661 aacgcaccat gcgttgaacg ccggcggaaa gggcgacgat gtcgtgttcg aagcctttat
     3721 ggacgcggta ggaaatggcg cggtcgttgt acagggaggc gaatacatgg tgcatcgctt
     3781 ctttaacgtt ttccaagccg ttgatattca agaaggtttc ctgttggccg gcaaacgatg
     3841 cgtccggcag gtcttcggcg gttgcggaag agcgtacggc aacggaaatg tccgcgccgc
     3901 cggcatcggc aaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga
     3961 agggcgtgtc caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt
     4021 cttcgacatc taattttgcc agtgcggcgg aaatgcgttc gctcagaccg ttgtgtgcga
     4081 ggaatgcgcg gtaggcatcg gctgtggtgg caaagccgcc ggggacgcga acgccttttt
     4141 cggtcagctg actgatcatt tcgcccagcg aggcgttttt accgcccacg cgttcaacat
     4201 ctgtcatacg caggttttca aaccaaatta cgtagttgtc ggccatttgt gtgtccaatc
     4261 caaaatatgt taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc
     4321 tgtcatgtgt tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg
     4381 tgtgtagcgg tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa
     4441 aacaggtggt ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa
     4501 attttctgcc aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt
     4561 ttgggtgtaa tccgaggtag gtgtgctgcg agtgctttcc ttgtgtctgc cgctgctgtt
     4621 atgatgggat tttaaacctg tgttttaagg atggaagatg agcagtccgc gccatgtgtt
     4681 ttacatttcc gaccgtaccg gtctgactgc cgagaatatc ggcgaggcgt tgctgaacca
     4741 gtttggcaat ctgtcgttca aacgccatac gcatccgttt gtcgatacgc cggaaaaggc
     4801 gcgcgcggtg gtggagaagg tcaatcggag ccggcaggaa aacggtcagc gtccgattgc
     4861 gtttgtcagt gtggttgatg acgaaatccg tcggattatc aaaggggcgg atgcttttca
     4921 gattaatttc tttgagactt ttttgggact gttggagaaa gaactcaata ccgaagccac
     4981 ggcatccgag caggggcatc acagtatcgg taatacgaag cgttacgatg cgcgtatgga
     5041 ggcggtgaat ttctcattga accacgatga cggggtcagc gataagaacc ttcaggaagc
     5101 ggatgtaatc ttgatgggtg tatcgcgttc gggcaaaacg ccgacctgcc tttacctcgc
     5161 cctgcaatac ggcatccgtg cggcaaacta tccgctgatt cccgacgatt tggaatcggc
     5221 cgatctgccg cgtatggtca agccttatag ggataagctg ttcgggttga ccatccagcc
     5281 ggaacgtttg caggccatcc gccaagagcg ccgcccgaat tcaacttatg ccaaaatcga
     5341 tacatgccgc agcgaggtgg cagacgcgca gagtatgttc agacggcatg ggattccgtt
     5401 tgcgaatacg acggataaat cagtggaaga gcttgccgta cacatccttc aggcgtgcaa
     5461 gctcaaacgc aggttttgac gggctttgat tcggtttgaa ggcggaactg ccgtctgaaa
     5521 tcaggtttca gacggca
//
LOCUS       DAXHRP010000139         5507 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.139, whole genome shotgun sequence.
ACCESSION   DAXHRP010000139 DAXHRP010000000
VERSION     DAXHRP010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.139"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(81..194)
                     /gene="rrf"
                     /locus_tag="ACFM72_001741"
     rRNA            complement(81..194)
                     /gene="rrf"
                     /locus_tag="ACFM72_001741"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(291..3182)
                     /locus_tag="ACFM72_001742"
     rRNA            complement(291..3182)
                     /locus_tag="ACFM72_001742"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3589..3664)
                     /locus_tag="ACFM72_001743"
     tRNA            complement(3589..3664)
                     /locus_tag="ACFM72_001743"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3629..3631),aa:Ala,seq:tgc)
     gene            complement(3670..3746)
                     /locus_tag="ACFM72_001744"
     tRNA            complement(3670..3746)
                     /locus_tag="ACFM72_001744"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3710..3712),aa:Ile,seq:gat)
     gene            complement(3848..5388)
                     /locus_tag="ACFM72_001745"
     rRNA            complement(3848..5388)
                     /locus_tag="ACFM72_001745"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1183 a         1605 c         1186 g         1533 t
ORIGIN      
        1 gacatttttt ccgggcaaag caaacatttt ttccgggcaa agcaaaaacc cccgaataat
       61 cgggggtttt ctgaatgggt gtttggcagt gacctacttt cgcatggaag aaccacacta
      121 tcatcggcgc tgagtcgttt cacggtcctg ttcgggatgg gaaggcgtgg gaccaactcg
      181 ctatggccgc caaacttaaa ctgttacaaa tcggtaaagc cttaatcaat atattcggta
      241 atgactgaat cagtcagtaa gcttttatct cttgaagttc ttcaaatgat agagtcaagc
      301 ctcacgagca attagtatgg gttagcttca cgcgttaccg cgcttccaca ccccacctat
      361 caacgtcctg gtctcgaacg actctttagt gcggttaaac cgcaagggaa gtctcatctt
      421 caggcgagtt tcgcgcttag atgctttcag cgcttatctc ttccgaactt agctacccgg
      481 ctatgcaact ggcgttacaa ccggtacacc agaggttcgt ccactccggt cctctcgtac
      541 taggagcagc ccccgtcaaa cttccaacgc ccactgcaga tagggaccaa actgtctcac
      601 gacgttttaa acccagctca cgtaccactt taaatggcga acagccatac ccttgggacc
      661 gactacagcc ccaggatgtg atgagccgac atcgaggtgc caaactccgc cgtcgatatg
      721 aactcttggg cggaatcagc ctgttatccc cggagtacct tttatccgtt gagcgatggc
      781 ccttccatac agaaccaccg gatcactatg tcctgctttc gcacctgctc gacttgtcgg
      841 tctcgcagtt aagctacctt ttgccattgc actatcagtc cgatttccga ccggacctag
      901 gtaaccttcg aactcctccg ttacgctttg ggaggagacc gccccagtca aactgcctac
      961 catgcacggt ccccgacccg gatgacgggt ctgggttaga acctcaaaga caccagggtg
     1021 gtatttcaag gacggctccg cagagactgg cgtctctgct tcaaagcctc ccacctatcc
     1081 tacacaagtg acttcaaagt ccaatgcaaa gctacagtaa aggttcacgg ggtctttccg
     1141 tctagcagcg ggtagattgc atcttcacaa ccacttcaac ttcgctgagt ctcaggagga
     1201 gacagtgtgg ccatcgttac gccattcgtg cgggtcggaa cttacccgac aaggaatttc
     1261 gctaccttag gaccgttata gttacggccg ccgtttactg gggcttcgat ccgatgctct
     1321 cacatcttca attaaccttc cagcaccggg caggcgtcac accctatacg tccactttcg
     1381 tgttagcaga gtgctgtgtt tttaataaac agtcgcagcc acctattctc tgcgaccctc
     1441 cggggcttac ggagcaagtc cttaacctta gagggcatac cttctcccga agttacggta
     1501 tcaatttgcc gagttccttc tcctgagttc tctcaagcgc cttagaattc tcatcctgcc
     1561 cacctgtgtc ggtttgcggt acggttcgat tcaaactgaa gcttagtggc ttttcctgga
     1621 agcgtggtat cggttgcttc gtgtccgtag acactcgtcg tcacttctcg gtgttaagaa
     1681 gacccggatt tgcctaagtc ttccacctac cggcttaaac aagctattcc aacagcttgc
     1741 caacctaacc ttctccgtcc ccacatcgca tttgaatcaa gtacaggaat attaacctgt
     1801 ttcccatcga ctacgcattt ctgcctcgcc ttaggggccg actcacccta cgccgatgaa
     1861 cgttgcgcag gaaaccttgg gctttcggcg agcgggcttt tcacccgctt tatcgctact
     1921 catgtcaaca ttcgcacttc tgatacctcc agcacacttt acaatgcacc ttcatcggcc
     1981 tacagaacgc tcccctacca tgccggtaaa ccggcatccg cagcttcggt tatagatttg
     2041 agccccgtta catcttccgc gcaggacgac tcgaccagtg agctattacg ctttctttaa
     2101 atgatggctg cttctaagcc aacatcctgg ctgtctgggc cttcccactt cgtttaccac
     2161 ttaatctatc atttgggacc ttagctggcg gtctgggttg tttccctctt gacaacggac
     2221 gttagcaccc gctgtctgtc tcccgaggaa ccacttgatg gtattcttag tttgccatgg
     2281 gttggtaagt tgcaataacc ccctagccat aacagtgctt tacccccatc agtgtcttgc
     2341 tcgaggcact acctaaatag ttttcgggga gaaccagcta tctccgagtt tgtttagcct
     2401 ttcaccccta tccacagctc atccccgcat tttgcaacat gcgtgggttc ggtcctccag
     2461 tacctgttac ggcaccttca acctggccat ggatagatca ctcggtttcg ggtctacacc
     2521 cagcaactca tcgccctatt aagactcggt ttccctacgc ctcccctatt cggttaagct
     2581 cgctactgaa tgtaagtcgt tgacccatta tacaaaaggt acgcagtcac accactaggg
     2641 cgctcccact gtttgtatgc atcaggtttc aggttctgtt tcactcccct cccggggttc
     2701 ttttcgcctt tccctcacgg tactggttca ctatcggtcg atgatgagta tttagccttg
     2761 gaggatggtc cccccatatt cagacaggat ttcacgtgtc ccgccctact tttcgtacgc
     2821 ttagtaccgc tgttgagatt tcgaatacgg gactgtcacc cactatggtc aagcttccca
     2881 gcttgttctt ctatctcgac agttattacg tacaggctcc tccgcgttcg ctcgccacta
     2941 cttgcggaat ctcggttgat ttcttttcct ccgggtactt agatggttca gttctccggg
     3001 ttcgcttctc taagtctatg tattcaactt aggatactgc acagaatgca gtgggtttcc
     3061 ccattcggac atcgcgggat cattgcttta ttgccagctc ccccgcgctt ttcgcaggct
     3121 tacacgtcct tcgtcgccta tcatcgccaa ggcatccgcc tgatgcactt attcacttga
     3181 ctctatcatt tcaagaactt ctttgacttt gcctaacatt ccgttgacta gaacatcaga
     3241 cttgaatttc ctactttgat aaagcttact gctttgttgt gtcttaatcc tgccttttgt
     3301 gtttcaggat taagtcgata caatcatcac ccaaatactg tgtttgtttt cttttctctt
     3361 gtgagcgatt ttttatcctt tgcaaagaat aaaaaatcaa aacaaacgct ttgtctttgt
     3421 ttgttgattt cggctttcca atttgttaaa gatcgatgcg ttcgatattg ctatctactg
     3481 tgcaaatcaa aacgagctga ttattatatc agcattttgt tcttggtcaa gtgtgatgtc
     3541 gccctgaatg gattctgttc cattcttccg ttttgatttg tacagtattg gtggaggcaa
     3601 acgggatcga accgatgacc ccctgcttgc aaagcaggtg ctctaccaac tgagctatgc
     3661 ccccgttatt ggtgggtctg ggaggacttg aacctccgac cccacgctta tcaagcgtgt
     3721 gctctaacca gctgagctac aaacccggat tctcttctta agcgaatctt gccttcactc
     3781 aagcttcttc cgcatctttt tcagtttacc gataagtgtg aatgcctaaa gcctcttctt
     3841 tctctagaaa ggaggtgatc cagccgcagg ttcccctacg gctaccttgt tacgacttca
     3901 ccccagtcat gaagcatacc gtggtaagcg ggctccttgc ggttacccta cctacttctg
     3961 gtatccccca ctcccatggt gtgacgggcg gtgtgtacaa gacccgggaa cgtattcacc
     4021 gcagtatgct gacctgcgat tactagcgat tccgacttca tgcactcgag ttgcagagtg
     4081 caatccggac tacgatcggt tttgtgagat tggctccgcc tcgcggcttg gctaccctct
     4141 gtaccgacca ttgtatgacg tgtgaagccc tggtcataag ggccatgagg acttgacgtc
     4201 atccccacct tcctccggct tgtcaccggc agtctcatta gagtgcccaa ctgaatgatg
     4261 gcaactaatg acaagggttg cgctcgttgc gggacttaac ccaacatctc acgacacgag
     4321 ctgacgacag ccatgcagca cctgtgttac ggctcccgaa ggcactcctc cgtctctgga
     4381 ggattccgta catgtcaaga ccaggtaagg ttcttcgcgt tgcatcgaat taatccacat
     4441 catccaccgc ttgtgcgggt ccccgtcaat tcctttgagt tttaatcttg cgaccgtact
     4501 ccccaggcgg tcaatttcac gcgttagcta cgctactaag caatcaagtt gcccaacagc
     4561 taattgacat cgtttagggc gtggactacc agggtatcta atcctgtttg ctacccacgc
     4621 tttcgggcat gaacgtcagt gttgtcccag gaggctgcct tcgccatcgg tattcctcca
     4681 catctctacg catttcactg ctacacgtgg aattctacct ccctctgaca cactcgagtc
     4741 acccagttca gaacgcagtt cccgggttga gcccggggat ttcacatcct gcttaagtaa
     4801 ccgtctgcgc ccgctttacg cccagtaatt ccgattaacg ctcgcaccct acgtattacc
     4861 gcggctgctg gcacgtagtt agccggtgct tattcttcag gtaccgtcat cagccgctgg
     4921 tattagcaac agccttttct tccctgacaa aagtccttta caacccgaag gccttcttca
     4981 gacacgcggc atggctggat caggcttgcg cccattgtcc aaaattcccc actgctgcct
     5041 cccgtaggag tctgggccgt gtctcagtcc cagtgtggcg gatcatcctc tcagacccgc
     5101 tactgatcgt cgccttggta ggcctttacc ccaccaacca gctaatcaga tatcggccgc
     5161 tcgaatagcg caaggcccaa aggtcccctg ctttctctct caagacgtat gcggtattag
     5221 ctgatctttc gatcagttat cccccactac tcggtacgtt ccgatatgtt actcacccgt
     5281 tcgccactcg ccacccaaga agcaagcttc tctgtgctgc cgtccgactt gcatgtgtaa
     5341 agcatgccgc cagcgttcaa tctgagccag gatcaaactc ttatgttcaa tctctaactt
     5401 tttaacttct ggtctgcttc aaagaaaccg acaggacaat gttcaaaaca ttatcttgtc
     5461 tgtctttcaa acagtgtgag gctcaaggca ctcacactta tcggtaa
//
LOCUS       DAXHRP010000140         5475 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.140, whole genome shotgun sequence.
ACCESSION   DAXHRP010000140 DAXHRP010000000
VERSION     DAXHRP010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.140"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            253..417
                     /locus_tag="ACFM72_001746"
     CDS             253..417
                     /locus_tag="ACFM72_001746"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258282.1"
                     /translation="MYKKVFFLNDRDCARAIFRHRPDVALPDRMLQTASEGFAVLEYE
                     DDNVREIDGI"
     gene            450..1883
                     /locus_tag="ACFM72_001747"
     CDS             450..1883
                     /locus_tag="ACFM72_001747"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HFC6258283.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGEILAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALAVLAYEAGVPQDLLPVVSGSASEISHEFVTNP
                     TVRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIHDEFCRKLSEKVAELKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALSKGASCLTGGKRSALGGTFFEPTVLSGVTTQMAVAREETFGPLCPVFRFE
                     TEAEVIAAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1992..2780
                     /locus_tag="ACFM72_001748"
     CDS             1992..2780
                     /locus_tag="ACFM72_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HFC6258284.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVIEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDQWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            3148..4704
                     /locus_tag="ACFM72_001749"
     CDS             3148..4704
                     /locus_tag="ACFM72_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HFC6258285.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4721..5467
                     /gene="surE"
                     /locus_tag="ACFM72_001750"
     CDS             4721..5467
                     /gene="surE"
                     /locus_tag="ACFM72_001750"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HFC6258286.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKTPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         1300 a         1362 c         1539 g         1274 t
ORIGIN      
        1 gggggatata ggtggtctat tgccgttaat cccaaacctg aacatgtttg aacaatcaga
       61 gcttcttcat tcgtataaaa aactgcccaa taattttgat tctgtttaaa aatcattatt
      121 ttatctccgt aattttgact gtaatgtttt gacttttgcc atactctacc acacgttgca
      181 actgcaatct ttgctcctta tatattgcac cccatcaaag ggctgcatta cttttctttc
      241 taaagattac cattgtataa aaaagtattt ttcttaaacg acagggattg cgcccgcgcc
      301 atattcagac accgcccaga tgttgcgctg cccgatcgga tgcttcagac ggcatcggaa
      361 gggtttgcag ttttggaata tgaagatgat aatgtccgcg agattgacgg catttgaaag
      421 cggttattcc gcataccgga ggacacgaaa tgaacgaata ttaccaatta atcaagcatc
      481 ccgatatttc cctttccccg atttcagacg gcatcggggt cggcaatccg gcaacgggcg
      541 aaattttggc gtatgtccgc aatacgggtt cggacaaact gaaaaacctg attcaaaagg
      601 cggcggcagc gcaaaaatta tgggcggcga aaactgcttt ggaacgcgcc gacatattgt
      661 ggcgttggta ttttttagtt aaagaaaaca aggaagcact ggcgcgcctg atgacgatgg
      721 agcagggcaa aagcctgacc gagtcgcgcg gcgaaattga ttatgcggct tcgtttgtgc
      781 gctggtttgc cgaagaagcg cggcggattg acggcgatgt gctgacaagc gtgaaagcgt
      841 cgcaaaaact ggtcgtgttg aaacagcccg tcggcgttac cgctgcgatt acgccgtgga
      901 actttccgtc cgcgatgatt gcgcgcaagg ctgcgccagc tttggcagtg ggttgcgcga
      961 tgatagtcaa accagcatcg ctcacgcctt tgagtgcgta tgcgttggct gtactggctt
     1021 acgaagcggg cgtaccgcag gatttgttgc ctgttgtcag tggtagtgct tcggaaatca
     1081 gccatgaatt tgttacgaac ccgactgtgc gcaaaatcag ctttaccggc tcaaccgaag
     1141 tcggcgcgaa aatttttgcc gacagcgcgg cagacattaa aaaactcagc ttggaactgg
     1201 gcggcaacgc gccgtttatc gtgtttgacg atgccgattt ggacaaagcc gtcgaaggcg
     1261 cgctcgccag taagttccgc aacagcggtc agacctgcgt ctgcaccaac cgtgtttacg
     1321 ctcaatcggg cattcacgat gaattttgcc gcaaattgag tgaaaaagta gccgagctca
     1381 aattgggcaa cggcttggag gatggcgtaa accaagggcc gctgattgag gaaaaagcag
     1441 tggaaaaagt cgagcagcac atcgccgacg cgctctccaa aggtgcaagt tgtctgaccg
     1501 gcggcaaacg cagcgcgttg ggtggaacgt tttttgagcc gactgtttta agcggcgtta
     1561 cgacgcaaat ggcggtggct cgcgaagaaa ccttcgggcc tttgtgtccg gtgttccgtt
     1621 ttgaaaccga agccgaagtc atcgcggctg cgaacaatac ggaatacggt ttggcggcct
     1681 accttttcac cgccgacacc gcccgccaat ggcgcgtcgg cgaagccttg gaatacggca
     1741 tggtcggcat caatacgggc ttaatcagta atgaagcggc accgttcggc ggcgtgaaac
     1801 gcagcggttt gggacgtgaa ggcagcaaat acggtgcgga cgaatatctg gaattgaaat
     1861 atctgtgtat ggatgtcggg tgacggatgc cgtctgaacg gcagggtttc agacggcgcc
     1921 gcattttaag cagtctctat ctgttgtaca atgcgccctg tttttacggt tatttttgat
     1981 ttgaacaaga tatgatggaa aacggaaaaa cagtcccgag atggcgtttt gccttgaaaa
     2041 gtgcgggctg gcatctctta atcagcctgt cggttgcagg gctggcggca ttgctggttt
     2101 ttaaggtttg gtatccttat ccttatgccg agctgacggg agggctgtcg ctttatcagc
     2161 tggtggtggc tgtcgatatt gtatgtggtc cgctgctgac tttaattttg gcaagcccga
     2221 agaaaaagac aaaggcacgc atggtcgatt tttccatggt cggcatcatc cagctggcgg
     2281 ctttggtgta cggtctgcac agcgtttctt tggcgcgccc tgtgatagag gcgtttgaaa
     2341 aagacaggat taatgttgtg accgccgccg aagtggcggt tgaagatttg cacaaagcgc
     2401 cggaagggct gcaaagcctg tcgtggttcg gcatccgccg cattgcattg aaagaacctg
     2461 aggatgcgga tgagaagaac aagacgctgg atttgtccct gaaaggtatc gagccgagta
     2521 tgcgtcccga ccagtggctg ccgtattccg acaaggaagc agaagaaatc cgcaaacatc
     2581 tgaaaccgct gaaagtcttg gcggatgcga gaaaaacgac ggttgcggac attctgaaac
     2641 aggcaggtct cgccgaaggg gaggagctgt attacctgcc gtttaccagc agcaggcaga
     2701 aagagtggat agtcattacc gataaagagg gcaacaccaa aggctacgcg ccgatagacg
     2761 gcttcatcat caccccttaa gcgttgggac tccgtccgca ctcgaacatc cgttcttcgc
     2821 ggcggtagaa tcagactgta tttgagaggg gcgcaacccc tcaatcaggg caacacatag
     2881 gggaaggctt tatgtgccgt ccgtgtgttg aaacatttca aaataagctc atgccgtccg
     2941 aacatccttt cagacggtat ggcgttttgc cattgccccg ataagctgtt aaactattta
     3001 aattatttcg accgaaggta cacgcacatg caagaccccg agcagagcag caagcccgcc
     3061 cgccgttttt tgtgcgtacc gtctgttcag gcagcttgag cgcttcaggc tgccttttcg
     3121 cgtttgaact tgaggaatac gaaaatcatg gatttcagtt ggttggcaga accgcatacc
     3181 tggataggtt ttgccacgct tttggtgttg gaagtcgtat tggggataga caatcttgtc
     3241 tttgtggcga ttttggcaaa caaggtccag cccgcacggc gcgaccgcgc acggattatc
     3301 gggctggggc tggcagtcgt catccgcatc attatgcttg cttttatggc gcacatcatc
     3361 acgctgaccg agccgctgtt ccaaatcggc ggcctcgccg tttccggcaa ggacatgatt
     3421 atgctcgcgg gcggtatttt cctgctttac aaagccacca ccgaactgca tgaacgcctc
     3481 gaagggcaca accgttttac tgttgccgac aaccaaaaaa aacacgcgcc gttttggggc
     3541 gtggtcgcgc aaatcctgat actggatgcc gtgttttcca tcgattcggt cattactgcg
     3601 gtggcgatgg tcgatcatat cgtcgtggcg atgggtgcgg tcgtcgtcgc aatggctgta
     3661 atgatttctg ccagcaaact cttgaccgaa tttgtcgaca gacaccctac cgtcgtgatg
     3721 ctctgccttg gttttttgtt gatgatcggt ttcagcctga ttgccgaagc cttccatttc
     3781 cacattccca aaggctacct ctacgccgcc atcggcttct cgattttaat cgaactgttt
     3841 aaccagattt cccagcgcaa cagccgcaaa aacgactaca tcggcagctc gtggcgcaaa
     3901 cggactgctg aaaacgtttt gggtatgatg ggcatacgcg aaagcgtgct tgccgatgcg
     3961 ggcggcgaat ctggggacga cgcgcatttt gaagaaaacg aaaaatcgat gatacgcagc
     4021 gtgctgacgc ttgccgaacg cccgattatg ggggtgatga tcccacgccg cgacatcgaa
     4081 cggctggaca tttcccaaag ccgcgaagaa cagtatgccc aactgcaaaa cacgccttac
     4141 agccgcctgc tcgttgtcgg aaaggcgggc gtggacgaac ctttgggcta catcaacaaa
     4201 aaagacctgc tgtcccaact gctggaaaca ggcggtctcg acattcagac ggcattgcgc
     4261 cagccgctcg tcctgcccga cagcaccacc gcgctgggcg caatcgaact cttccgccaa
     4321 agcagcgcgg attatgcttt ggtggtggac gagttcggcg cggtattggg catggtaacc
     4381 atgaaagacc tgctcgaaac catcgcaggc gagttccccg aagaatttga gcgcgaagaa
     4441 gaaccagccg ttcaggggaa tcccgatgaa agcctgacgg tggaaggcgc gttggaatat
     4501 gtggagctgg catcccaact caatctgccg cagcaggagg aagatgccga tttccatacg
     4561 gttgccgggc tgattatgga agaattgcaa accatccccg atgtcggtga ttttgccgat
     4621 ttccacggct ggcggtttga agtggtcgaa aaagaagggc agcgcatcga gcgggtcaaa
     4681 atcaccaaat tgcccgaaga ataagtattc aggatagaga atgaacgttt tgatttccaa
     4741 cgacgacggc tacctctccg aaggcatcgc cgttttggcg cgcgttacgg cggaatttgc
     4801 caacgtcagg gtggtcgcgc ccgaacgcga caggagcggg gtcagcaatt cgctgacgct
     4861 ggaacgccct ttgcagttga aacaggcgca aaacgggttc tactatgtca acggcacgcc
     4921 gaccgactgc atccacatcg ggcagtctgt attttcggat tttcaggccg attttgtctt
     4981 ttcgggcatc aaccggggcg cgaatatggg ggacgacacg ctttattcgg ggacggttgc
     5041 ggcggcaacc gaagcctacc ttatgggcat acccgctgtg gcgttttcct taaacgacgc
     5101 ttccggacgc tattgggcaa ccgcagaaaa ggcactgtgg acattgttgg cgcatttttt
     5161 caaaaccccc ccgcagtccc ctattttgtg gaacatcaat atccccgccg tcgagccgga
     5221 agatgtgcgg ggcattaaaa tcgcccgttt gggcaggagg catcacggtc agaacgtcat
     5281 ccccgcgcgc aatccgcgcg gcgaacagat ttattggata ggaccggtcg gcgaagtttc
     5341 cgatcgggaa gagggaacgg atttcggtga atgcggcgca ggtttcatta ccgtaacgcc
     5401 gctgcaaatc gacctgaccg cctatccgga catggcggaa acagcggcat tctggcatgc
     5461 ggactgaccg tttca
//
LOCUS       DAXHRP010000141         5414 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.141, whole genome shotgun sequence.
ACCESSION   DAXHRP010000141 DAXHRP010000000
VERSION     DAXHRP010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5414
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.141"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            116..637
                     /locus_tag="ACFM72_001751"
     CDS             116..637
                     /locus_tag="ACFM72_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
                     /protein_id="HFC6258287.1"
                     /translation="MSCFSIKRMSAFRARITVFFTAFVFLTAALPAYAERLPDFLAKI
                     QPSEIFPGADRYSKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMALA
                     NDGTIAGAKLVDHHEPIMLIGIPHLPAPGRAIRLNWLPAYIKPNFISTNRLRLKGLPT
                     VPQPSKETGAGVP"
     gene            526..1725
                     /locus_tag="ACFM72_001752"
     CDS             526..1725
                     /locus_tag="ACFM72_001752"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HFC6258288.1"
                     /translation="MASGVYQTKLYIDKPITIEGPADRSATIEGDRSGRTIAVHAPDV
                     TLRNLTVTRSGMSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENK
                     IVGDATLRVNERGNGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRF
                     AVHYMYTNDSEISGNISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIH
                     DNIINKAGKCVFAYNANYDKLSANHFENCQIGIHFTAAIEGTSLHDNSFINNESQVKY
                     VSTRFLDWSEGGHGNYWSDNSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSP
                     AISIVKWAQAQFPAVLPGGVVDSKPLMKPYAPKIQTRYQAMKDELLKEVETRQSEWGR
                     AENGSLN"
     gene            1783..2397
                     /locus_tag="ACFM72_001753"
                     /pseudo
     CDS             1783..2397
                     /locus_tag="ACFM72_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            2414..2545
                     /locus_tag="ACFM72_001754"
                     /pseudo
     CDS             2414..2545
                     /locus_tag="ACFM72_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            2542..3036
                     /locus_tag="ACFM72_001755"
     CDS             2542..3036
                     /locus_tag="ACFM72_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HFC6258289.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(3124..4785)
                     /locus_tag="ACFM72_001756"
     CDS             complement(3124..4785)
                     /locus_tag="ACFM72_001756"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HFC6258290.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GIGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGILVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVEGFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(4915..>5414)
                     /locus_tag="ACFM72_001757"
     CDS             complement(4915..>5414)
                     /locus_tag="ACFM72_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC6258291.1"
                     /translation="DLDFSCGAASVATLLNNFYGQKLTEEDVLKKLDKEQMPASFEDM
                     RRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSL
                     GHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFTRSPKRQTEFAVGQVK
                     WWRAY"
BASE COUNT         1293 a         1471 c         1388 g         1262 t
ORIGIN      
        1 tatcccgtat gcggattggt tttaagattt gtaaatttaa tttgcatcaa aaaatcgccg
       61 atagatgatt catataatat caatattaaa gagtatcggt atatcgggga tagtcatgtc
      121 ctgtttttca atcaaacgta tgtccgcgtt tcgggcgcgg ataacagtgt tttttaccgc
      181 ctttgtcttt ttgacggcgg cactgcccgc ttatgcggag cgtctgcctg attttctggc
      241 gaaaatacag ccttcggaaa tttttccggg tgcggaccgt tacagcaagc cggaaggtaa
      301 gcctatggtt gcccgcgttt acaaaggcga tgagcagttg ggcttggtct atatcacgac
      361 cgatgcggtc aatacgcgcg gttattcgag caaaccgatc gatacgctga tggctttggc
      421 aaatgacggc acgatagccg gagcgaaact ggtcgatcat cacgaaccga ttatgctgat
      481 cggtatcccg catttgcccg cgcccgggcg ggcgatacgc ttaaactggc ttccggcgta
      541 tatcaaacca aactttatat cgacaaaccg attacgattg aagggcctgc cgaccgttcc
      601 gcaaccatcg aaggagacag gagcgggcgt accatagccg tacacgcgcc ggacgtaacg
      661 ctccgcaacc tgaccgttac ccgttccggt atgagcctgc ctgcaatgga tgccggtatt
      721 tatctcgaag aaaccgcccc gcgcgccctg atcgaacaca acaatatttt ggataattcg
      781 gtcggcgtat atctgcatgg ttctgccgat gcgatggtgc gggagaataa aatcgtcggc
      841 gacgcgactt tgcgcgtgaa cgagcgcggc aatggcgtta ccgtttggaa cgcgcccggc
      901 gcgcaggtcg tcggcaacga tatttccaaa gggcgggacg gcattttttc caataccagc
      961 acgcacaaca cctataaaaa caaccgcttc agcgatttgc gtttcgccgt ccactatatg
     1021 tacaccaacg acagcgaaat cagcggcaat atttccgtgg gcaacaatat gggctatgtg
     1081 ctgatgtttt ccgagcggct caaagtgttt gacaatatcg ccgtcggcag ccgcgaccaa
     1141 ggcatcatgc tcaactatgt caactattcc gatattcacg acaacattat caacaaagcg
     1201 ggcaagtgcg tttttgccta caatgccaac tacgataaac tgtccgccaa tcattttgaa
     1261 aactgccaaa tcggcataca ctttaccgcc gccatcgaag gcacgtcact gcacgacaat
     1321 tcctttatca acaacgaaag ccaggtcaaa tacgtcagca cgcgctttct cgactggagc
     1381 gagggcggac acggcaacta ttggagcgac aacagcgcgt tcgatttgaa cggcgacggc
     1441 ttcggcgaca gcgcgtaccg gcccaacggc atcatcgacc aaatcatctg gcgcgcgccc
     1501 gtatcgcgtc tcttgatgaa cagtcccgca atcagcatcg tcaaatgggc gcaggcgcag
     1561 tttcccgccg ttctgcctgg cggcgtggtg gacagcaaac cgctgatgaa gccttatgcc
     1621 cccaaaattc aaacccgtta tcaggcgatg aaggacgagc tactcaaaga agtcgaaacg
     1681 cggcagtcgg aatggggcag ggcggaaaac ggttctttga actagtctgc ttcagacggc
     1741 atccggattc aaatgccgtc tgaaaacaca aaaggaacaa ccatgaccac acatcatgtc
     1801 gaattgagga aggtaaccaa acggttcggg gcgcaaaaag ccgtcaacca agtcgatttg
     1861 gttttgaagg caggagaaag cgtcgggctt gccggacaca acggcgcggg caagtccacc
     1921 attatgaagc tgatactcgg gctgattacc ccgaccgaag gcgaagtgat gcttttgggc
     1981 gaacgtaccg gtagcaaagc gggggcgcgg cttcgcagcc aaatcggcta cctgcccgaa
     2041 accgttgcgc tgcacccttc gctgatcggc atcgaaacgc tggattttta tgccaaactt
     2101 aaaaaacagc cgctcacgca gaaccggggg ctgcttgagc gcgtcggcat ttcacaggcg
     2161 gcacaccgcc gcgtcggcac ttattctaaa gggatgcgcc aacgccttgc cttggcacaa
     2221 gccctgctgg gcgagcccaa agtcctgctg tttgatgaac cgacaaccgg tcttgaccat
     2281 gcatcacgac aaatgtttta cgaagtcgtg cgcgaactca acgggcgcgg cgcgaccgta
     2341 ttgctcagca cccacgccct tgccgagttg gacgggcacg ccgaccgcat tatcgtggat
     2401 taaatttaat ccactatatg cgggtatggc gggtttgagc ggacaaatca gcctgaccgt
     2461 ccccgttttg ctgaccgctc aggttttatg ggttatcatt ccgcttgttt tggcagccgg
     2521 aatttttaga aagcgacaaa tatgaaaaaa accctgttgg caattgttgc cgtttccgcc
     2581 ttaagtgcct gccggcaggc ggaagaggga ccgccgcctt taccccggca gattagcgac
     2641 cgttcggtcg gacactattg cagtatgaac ctgaccgaac acaacggccc caaagcccag
     2701 attttcttga acggcaaacc cgatcagccc gtttggttct ccaccatcaa gcagatgttc
     2761 ggctatacca agctgcccga agagcctaaa ggcatccgcg tgatttacgt taccgatatg
     2821 ggcaatgtta ccgattggac gaatcccaat gccgacacgg agtggatgga tgcgaaaaaa
     2881 gccttttacg tcatcgacag cggctttatc ggcggtatgg gtgcggaaga cgcgctgccg
     2941 ttcggcaaca aagagcaggc tgagaaattt gcaaaggata aaggcggtaa ggttgtcggt
     3001 ttcgacgata tgcctgatac ctatattttc aaataatatt gaaaaaaccg gccgaaactt
     3061 taaaaacgag tttcggtcgg tttttctttt cttgttcggt atagtgtcgg caggaaagaa
     3121 ccttcacatc ccgccgtaat tcggcccgct cgcgccttcg gggcaaatcc aagtgatgtt
     3181 ttgcgtcggg tctttgatgt cgcaggtttt gcagtgcacg cagtttgccg cgttgatttg
     3241 caggcgcgga ttgccgtttt cttcaacaat ttcgtacacg ccggccggac aatagcgcgt
     3301 ttcgggcgag gcgtattctt tgtagttcac gtctatcatc gtttgcggat tgttcagcac
     3361 caaatggtcg ggctggtttt cttcgtgcgc gagattggca aggaagacgc tgctcaagcg
     3421 gtcgaaggtc aacacgccgt cgggtttcgg ataatcaatc ggcttacacg cggcggcttt
     3481 tttaagctgc tcgttgtctt taccgtgatg tttcaaggtc cacggggctt tgcctctgaa
     3541 aatcatctgg tcgatgccgg tataaagcga gccgaggtaa acgccccatt tgaatgacgg
     3601 acggacgttg cgcgcggcgt aaagctcttg atacagccag ctttgttcaa aacgttgctg
     3661 ataatccgcc gcctctttgc cgctgtcgaa accctccact tcttcaaggt tttccaacaa
     3721 ggggaacacg gcttcggcgg cgagcatggc ggatttcatc gcggtatgaa tgcctttgat
     3781 gcgcggcata ttgaggaaac ccgccgcatc gccgaccaaa atgccccctt tgaacgagag
     3841 tttcggcagg ctttgcaaac cgccttcaat cagcgaacgt gcgccgtaag caatgcggcg
     3901 gccgccttca aaggttttgc ggatttcggg atgggttttg aaacgttgga actcttcaaa
     3961 cggcgacaga taaggatttt gatagtccaa accgaccacg aagccgacgg cgactttgtt
     4021 gtcatcgaaa tggtaaacaa acgcgccgcc gtaggttttg ctgtccagcg gccagcctgc
     4081 gctgtgcacc accaaaccgg gctgatgctg ttcggacggc acttcccaaa cttctttaat
     4141 gcccaagccg taagtttgcg gctggctgtt ttggtcgagt ttgaagcgtt cgatgatttg
     4201 tttggaaagc gaaccgcgac aaccttcggc aaacagggtt tgctgcgccc aaagctccat
     4261 gccgggttgg aatgaatcgg tcggctcgcc gtctttgcca atgcccatat tgccggttgc
     4321 aatgcctttg accgaaccgt cttcgtgata cagcacttcg gcggcggcaa agcccggata
     4381 gatttccacg cccatatttt ccgcctgctc cgccaaccag cgcacgactt cgcccaagct
     4441 gacgatgtag ttgccgtgat tgtcgaaatt tggggtaata ggcagattga acgctttttt
     4501 ctcagtcagg aacaacactt tgtcctgcgt taccgtacgc gtcagcggcg cgcctttttc
     4561 tttccagtcg ggaatcaact cattcagcgc aatcggatcg ataaccgcgc ccgccagcga
     4621 atgtgcaccc gcctccgaac ctttctccac cacgcaaacg ctgatttcgc gcccgttctg
     4681 ttcggcaagc tgcttgagtt tgatggcggc ggacaaaccc gacgggcctg cgccgacaat
     4741 cacgacatcg tattgcatac tgtcgcgggt gatggattct gtcatggcgg ttcctgtgta
     4801 tttattattg aattgcaaat ccgtaattat acaacgggaa catatagtta ccaaatacaa
     4861 caaaggtcgt ctgaaaacca tattttcggt tttcagacga cctttgtcga aatttcaata
     4921 agcacgccac cattttacct gtccgaccgc aaactccgtc tgacgtttcg gactgcgtgt
     4981 gaaaaacgcc ttatccccgc cggcatccct ccctttcggc acaaccgcca aaatcttacc
     5041 tgccaaattt ccctcacggg tttgccaagc atccaaaaac tgcgccctgc tcatcgaaac
     5101 atgacccagc gacgggtcgg caagcaaaac cgtattgccg tctataccgc gcaataccga
     5161 gaaatgatca tccttgcggt atttcagata cacgatgacg gggatttgca actgtgcaag
     5221 ctgctcgaaa gacagggcat agcctttcgc ttcaaaaccc aaatcaggca taatgcgccg
     5281 catatcctca aacgacgcgg gcatctgctc cttatccagt ttttttaaca cgtcctcttc
     5341 cgtcagcttt tgcccgtaaa aattgttcaa aagcgtcgcc accgaagccg ccccgcagga
     5401 aaaatccaaa tcct
//
LOCUS       DAXHRP010000142         5375 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.142, whole genome shotgun sequence.
ACCESSION   DAXHRP010000142 DAXHRP010000000
VERSION     DAXHRP010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5375
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.142"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            176..2317
                     /locus_tag="ACFM72_001758"
     CDS             176..2317
                     /locus_tag="ACFM72_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC6258292.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVFSEKPKAQKDQGGYGFAMRLKRRNWYPRAEESEVKLNESDWEATGLPTDPKELPK
                     RQKSVIEQVKTDDNSNIYSSPYLTPSNHQNGNAGNATNQPKNEVKDYKEFKYVYSGWF
                     YKHAKQDIDLKNKIVRQGDDGYIFYHGKEPSRQLPASGKVTYKGVWHFVTDTKKGQEF
                     REIIQPSKKQGDRYSGFSGDDNEEYSNKKETILQNGHEGYGFTSNLEVDFGNKKLTGK
                     LIRNNASLNNNTNNDKHTTQYYSLEAQVTGNRFNGKAIATDKPKANETKEHPFVSDSS
                     SLSGGFFGPQGEELGFRFLSNDQKVAVVGSAKTKDKLENGAAASGSTGAAASNGAAGT
                     SSENSKLTTVLDAVELKLGDKEVQKLDNFSNAAQLVVDGIMIPLLPKASESGNNQANQ
                     GTNGGTAFTYKTTYTLESDKKDTQAQTVTNGTQTASGTESVNGGQAGTKTYEVEVCCS
                     NLNYLKYGLLTRKTAGNTGEGGNSSPTAAQTAQGAQSMFLQGERTDENKIPTDQNVVY
                     RGSWYGHIANGTSWSGNASDKEGGNRAEFTVNFDKKKINGTLTADNRQAATFTIEGDI
                     EGNGFSGTAKTADSGFDLDQSNNTRTPKAYITNAKVQGGFYGPKAEELGGWFAYSDDK
                     QTKNATDASGNGNSASSATVVFGAKRQQPVR"
     gene            2404..5154
                     /gene="tbpA"
                     /locus_tag="ACFM72_001759"
     CDS             2404..5154
                     /gene="tbpA"
                     /locus_tag="ACFM72_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HFC6258293.1"
                     /translation="MQQQHLFRLNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDDSKYAYFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDENRKYGPIRGNGKYAGNHKYGGLFTNGENGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYYQHANRAYSSKTPPKTGNGGSNASPNGSQDNPYWVSIGGGNVVTGQICRLG
                     NNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRT
                     LSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAG
                     IVFKGDFGNLEASWFNNAYRDLIVRGYEAQIQNGKETAKGDPAYLNAQSARITGINVL
                     GKIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGY
                     DQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYT
                     IKKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEM
                     KF"
BASE COUNT         1559 a         1335 c         1368 g         1113 t
ORIGIN      
        1 gatatacgtg ggaatgacgt ggtgcaggtt tccgtgcgga cgcgttcgga ttcacgactg
       61 cgcggaaatg acgggatttt ggtgtattcc ctaaaaaaat aaaaaagtat ttgcaaattt
      121 gttaaaaata aataaaataa taatccttat cattctttaa ttgaattggg tttatatgaa
      181 caatccattg gtgaatcagg ctgctatggt gctgcctgtg tttttgttga gtgcttgttt
      241 gggcggcggc ggcagtttcg atcttgattc tgtcgatacc gaagccccgc gtcccgcgcc
      301 aaagtatcaa gatgtttttt ccgaaaagcc gaaagcccaa aaagaccaag gcggatacgg
      361 ttttgcgatg aggttgaaac ggaggaattg gtatccgagg gcagaagaaa gcgaggttaa
      421 actgaacgag agtgattggg aggcgacagg attgccgaca gaccccaagg aactccctaa
      481 acggcaaaaa tcggttattg aacaagtaaa aacagacgac aacagcaata tttattcttc
      541 cccttatctc acaccatcaa accatcaaaa cggcaacgct ggcaacgcta caaaccaacc
      601 aaaaaatgaa gtaaaagatt ataaagagtt caagtatgtt tattccggtt ggttttacaa
      661 acacgctaaa caagatattg atttgaaaaa taaaattgta cgacaaggcg acgacggtta
      721 tatcttttat cacggcaaag aaccttcccg acaacttcct gcttctggaa aagttaccta
      781 taaaggtgtg tggcattttg taaccgatac aaaaaagggt caagagtttc gtgaaattat
      841 ccagccttca aaaaaacaag gcgacaggta tagcggattt tcgggtgatg acaacgaaga
      901 atattccaac aaaaaggaaa cgattttaca aaacggtcat gaaggttatg gttttacctc
      961 gaatttagaa gtggatttcg gcaataagaa attgacgggt aaattaatac gcaataatgc
     1021 gagcctaaat aataatacta ataatgacaa gcacaccacc caatactaca gccttgaggc
     1081 tcaagtaaca ggcaaccgct tcaacggcaa ggcaatagcg accgataaac caaaagcgaa
     1141 tgaaaccaag gaacatccct ttgtttccga ctcgtcttct ttgagcggcg gctttttcgg
     1201 cccgcagggt gaggaattgg gtttccgctt tttgagcaac gatcaaaaag ttgccgttgt
     1261 cggcagcgcg aaaaccaaag acaaactgga aaatggcgcg gcggcttcag gcagcacagg
     1321 tgcggcagca tcaaacggtg cggcaggcac gtcgtctgaa aacagtaagc tgaccacggt
     1381 tttggatgcg gtcgagctga aattgggcga taaggaagtc caaaagctcg acaacttcag
     1441 caacgccgcc caactggttg tcgacggcat tatgattccg ctcctgccca aggcttccga
     1501 aagtgggaac aatcaagcca atcaaggtac aaatggcgga acagccttta cctacaaaac
     1561 aacctacacg ctggaaagtg ataaaaaaga cacccaagcc caaacagtca cgaacggcac
     1621 gcaaaccgct tcgggtactg agagcgttaa cggcgggcag gcaggaacga aaacctatga
     1681 agtcgaagtc tgctgttcca acctcaatta tctgaaatac gggttgctga cgcgcaaaac
     1741 tgccggcaat acgggggaag gcggcaacag cagcccaacc gccgcccaaa cggcacaggg
     1801 tgcacaaagt atgttcttac aaggcgagcg taccgatgaa aacaagattc caaccgacca
     1861 aaacgtcgtt tatcgggggt cttggtacgg gcatattgcc aacggcacaa gctggagcgg
     1921 caatgcttct gataaagagg gcggcaacag ggcggaattt actgtgaatt tcgataagaa
     1981 aaaaattaac ggcacgttaa ccgctgacaa caggcaggcg gcaaccttta ctattgaggg
     2041 cgatattgag ggcaacggtt tttccggtac ggcgaaaact gctgactcag gttttgatct
     2101 cgatcaaagc aataacaccc gcacgcctaa ggcatatatc acaaacgcca aggtgcaggg
     2161 cggtttttac gggcctaaag ccgaagagtt gggcggatgg tttgcctatt cggacgataa
     2221 acaaacgaaa aatgcaacag atgcatccgg caatggaaat tcagcaagca gtgcaactgt
     2281 cgtattcggt gcgaaacgcc aacagcctgt gcgataagca cggttgccga acaatcaaga
     2341 ataaggcttc agacggcacc gctccttccg atgccgtctg aaagcgaaga ttagggaaac
     2401 attatgcaac agcaacattt gttccgatta aatattttat gcctgtcgct gatgactgcg
     2461 ctgcctgctt atgcagaaaa tgtgcaagcc ggacaagcac aggaaaaaca gttggatacc
     2521 atacaggtaa aagccaaaaa acagaaaacc cgccgcgata acgaagtaac cggtttgggc
     2581 aaattggtca aaaccgccga caccctcagc aaggaacagg tactcgatat ccgtgacctg
     2641 acgcgttacg accccggcat cgccgtcgtc gaacaggggc gcggcgcaag ctctggctac
     2701 tcgatacgcg gtatggacaa aaaccgcgtt tccttgacgg tggacggctt ggcgcaaata
     2761 cagtcctaca ccgcgcaggc ggcattgggc gggacgagga cggcgggcag cagcggcgca
     2821 atcaatgaaa tcgagtatga aaacgtcaag gctgtcgaaa tcagcaaagg ctcaaactcg
     2881 gtcgaacaag gcagcggcgc attggcgggt tcggtcgcat ttcaaaccaa aaccgccgac
     2941 gatgttatcg gggaaggcag gcagtggggc attcagagta aaaccgccta ttccggcaaa
     3001 aaccgggggc ttacccaatc catcgcgctg gcggggcgca tcggcggtgc ggaggctttg
     3061 ctgatccaca ccggccggcg cgcgggggaa atccgcgccc acgaagatgc cggacgcggc
     3121 gttcagagct ttaacaggct ggtgccggtt gaagacgaca gcaaatacgc ctatttcatc
     3181 gttgaagaag aatgcgaaag caaaaattac gaaacgtgta aagcgaatcc gaaaaaagat
     3241 gttgtcggca aagacgaacg tcaaacggtt tccacccgag actacacggg acccaaccgc
     3301 ttccttgccg atccgctttc atacgaaagc cgatcgtggc tgttccgccc gggttttcgt
     3361 tttgaaaaca aacggcacta catcggcggc atactcgaac acacgcaaca aactttcgac
     3421 acgcgcgata tgacggttcc ggcattcctg accaaggcgg tttttgatga aaatagaaaa
     3481 tacggaccga taagaggcaa cggcaaatac gcgggcaacc acaaatacgg cggactgttt
     3541 accaacggcg aaaatggtgc gctggtgggc gcggaatacg gtacgggcgt gttttacgac
     3601 gagacgcaca ccaaaagccg ctacggtttg gaatatgtct ataccaatgc cgataaagac
     3661 acttgggcgg attatgcccg cctctcttac gaccggcagg gcatcggttt ggacaatcat
     3721 tttcagcaga cgcactgttc tgccgacggt tcggacaaat attgccgtcc gagtgccgac
     3781 aagccgtttt cctactacaa atccgaccgc gtgatttatg gggaaagcca caggctcttg
     3841 caggcggcat tcaaaaaatc cttcgatacc gccaaaatcc gccacaacct gagcgtgaat
     3901 ctcgggtttg accgctttgg ctctaatctc cgccatcagg attattatta tcaacatgcc
     3961 aaccgcgcct attcgtcgaa aacgccccct aaaaccggca acggcggctc aaacgccagc
     4021 cccaacggca gccaagacaa cccctattgg gtcagcatag gcgggggaaa tgtggttacg
     4081 gggcaaatct gccgcttggg caacaatact tatacggact gtacgccgcg cagcatcaac
     4141 ggcaaaagct attacgcggc agttcgggac aatgtccgtt tgggcaggtg ggcggatgtc
     4201 ggcgcggggt tgcgctacga ctaccgcagc acgcattcgg acgacggcag cgtttccacc
     4261 ggcacgcacc gtaccctgtc ctggaacgcc ggcatcgtcc tcaaacctgc cgactggctg
     4321 gatttgactt accgcacttc aaccggcttc cgcctgccct cgtttgcgga aatgtacggc
     4381 tggcgggcgg gtgttcaaag caaggcggtc aaaatcgatc cggaaaaatc gttcaacaaa
     4441 gaagccggca tcgtatttaa aggcgatttc ggcaacttgg aggcaagttg gttcaacaat
     4501 gcctaccgcg atttgattgt ccggggttat gaagcgcaaa ttcaaaacgg caaagaaaca
     4561 gccaaaggcg acccggctta cctcaatgcc caaagcgcgc ggattaccgg catcaatgtt
     4621 ttgggcaaaa tcgattggaa cggcgtatgg gataaattgc ccgaaggttg gtattctaca
     4681 tttgcctata atcgtgtccg tgtccgcgac atcaaaaaac gcgcagaccg caccgatatt
     4741 caatcacatc tgtttgatgc catccaacct tcgcgctatg tcgtcggctt gggctatgac
     4801 caaccggaag gcaaatgggg tgtgaacggt atgctgactt attccaaagc caaggaaatc
     4861 acagagttgt tgggcagccg ggctttgctc aacggcaaca gccgcaatac aaaagccacc
     4921 gcgcgccgta cccgcccttg gtatattgtg gatgtgtccg gttattacac gattaaaaaa
     4981 cacttcaccc tccgtgcggg cgtgtacaac ctcctcaact accgctatgt tacttgggaa
     5041 aatgtgcggc aaactgccgg cggcgcagtc aatcaacaca aaaatgtcgg cgtttacaac
     5101 cgatatgccg cccccggccg aaactacaca tttagcttgg aaatgaagtt ttaaacgtcc
     5161 aaacgccgca aatgccgtct gaaaggcttc agacggcatt ttttacacaa ttttcaccgt
     5221 ttcccatcat ccccgacaat accgtaatct tgaaacccgt cattcccacg caggcgggaa
     5281 tccagtccgt tcggtttcgg tttttttgag gtttcgggta acttctaaac cgttattttc
     5341 tcgaaagcgg aaaatcaaaa acagaaatct aaaat
//
LOCUS       DAXHRP010000143         5363 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.143, whole genome shotgun sequence.
ACCESSION   DAXHRP010000143 DAXHRP010000000
VERSION     DAXHRP010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5363
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.143"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(180..3014)
                     /gene="lbpA"
                     /locus_tag="ACFM72_001760"
                     /gene_synonym="tbpA"
     CDS             complement(180..3014)
                     /gene="lbpA"
                     /locus_tag="ACFM72_001760"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HFC6258294.1"
                     /translation="MNRKHTFPLTLTALAVAAAFPSYAANPETATPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVEYGIDRLDAFRQTYDIQKQNKKAEYFLAEGEREP
                     KPVAKLAGNGNYLKNQLNRWVEERKKNNQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAKKF
                     SDKSGVYDGDDFRDGLYFRPNIEEWKGDKNLVKGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEST
                     GFDDNNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRQNFTTREELVRSGRYVNRSWNSGIVFKPSRHFSLSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     QKTKLPDSTGRLTEIDIRDYYNAQNMSLQGINILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(3011..5134)
                     /locus_tag="ACFM72_001761"
     CDS             complement(3011..5134)
                     /locus_tag="ACFM72_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC6258295.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAGPSVETTPVNRPAVGAAMRLPRRNTAFHREDGTVIPDSKQAEEQLSFKEG
                     DVLFLYGSKENKLQQLKSEIHKRDPDVEIRTSENENKKYDYKFVDAGYVYVKGKDEIK
                     WTSDHKQFSNRLGYDGFVYYSGEHPSQSLPSAGKVKYFGNWQYMTDAKRHRAGQAVGI
                     DNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDNKTMNGKLIKNQYVRNKNNL
                     DEPKKPLTIYDITAKLDGNRFTGSAKVNPDLAKNLAGNERLFFHADADQRLEGGFFGD
                     NGEELAGRFISNDNSVFGVFAGKQKTDASGTKPALPSGKHTKILDSLKISVDEATDDH
                     ARKFAISTMPDFGHPDKLLVEGREIPLVSQEKTIELADGRKMTVSACCDFLTYVKLGR
                     IKTERPAAKPKAQDEEDSDIDNGEESEDEIGDEEEGTEDAAAGDEGSEEDEATENEDG
                     EEDEAEEPEEESSAEGNGSSNAILPVPEASKGRDIDLFLKGIRTAEADIPQTGTAHYT
                     GTWEARIGVPDKKDDQLYGTTFIQKDSYANQGAKAQFTVDFGKKSISGTLTEKNDTHP
                     AVYIEKGVIDGNGFHATARTRDNGIDLSGQGSTNPQRFEANNLLVTGGFYGPQAAELG
                     GNIIDSDRKFGAVFGAKKDDKEATR"
BASE COUNT         1143 a         1440 c         1261 g         1519 t
ORIGIN      
        1 tttttgagtt tcagtcattc ccgataaatt gtcttagcat tgaatgtcta gattcccgcc
       61 tgcgcggaaa tgacggcgga aatcttgttt atattgaatc aaaaaaacct gcaccttaat
      121 cagttggcgg tttagtccga cttttggggt gcagatcaag ctttcagacg gtatttcctt
      181 taaaacttca tttcaagcgc gaggctgaag tttctgcccg gtgcggcata ccttccatag
      241 ttgctgtcgc cgccgtgccg gtttgccgtg ctttccgcag tctggcgcaa ggattcccaa
      301 gtaacgtagc ggtagttgcc gatattgtag atggccgccc tcaaggtcag ccgttttttc
      361 agattcagat aggcggaaac gtctgccgtc gaccaagaag acgacgctct ttttgtcgaa
      421 tatcgttttt gatcgcctgc cagataagca agctcgtcag ggtttttccc tttggaatag
      481 gtcagcataa tgtttgcgcc ccatttcccc tctggctggt cgtatccgaa ccccaaaaca
      541 taacgcgacg gctgtaccgc atccaaagca tagctgcgga gggacagtcc cggccggttg
      601 gataccgatt tcggtttgat acggttgtac gccaatgtgg tgtacaaacc ttcgggcagt
      661 ttgccgtaca caccgttcca gtcgattttt cccaatatat taatgccttg aagcgacata
      721 ttttgggcat tgtaataatc gcgtatatca atctctgtca atcgtcctgt tgaatccggc
      781 aatttggttt tttgatcggc aacggcaatc atatcggtat aacggttgcg gaagctgctg
      841 atttccaaaa agccgaagtc gcccttccac tgcaaaccga tttcgcggtt ggctgccttt
      901 tccgacttca gggcgggacg ctgccagcct ttcggataat cgtgataaat gtctatcccg
      961 aaaagttctt ggaatgaggg cgttctgaag ccgctggagg cacggtaaga caaagaaaaa
     1021 tgccggctcg gtttgaacac gatgccactg ttccacgaac ggttaacata ccgcccgctg
     1081 cggacgagtt cttcccgcgt ggtaaagttt tgccggtcgt acctgccgcc caagctgaaa
     1141 tcgaaatatt tgccgattga aaaacggtcg ttcaaagaaa tgtggatatt gctgccgttg
     1201 atttttcttg gcacgcattt gcgggaacgc agggtttcga tgtagccgca gaccgaccct
     1261 tcgacgactt cgggcttacc caaacggtac ttgtcttgat tgttatcatc gaatcccgtg
     1321 gattccgaaa tccttgccgc attgtgggaa agctgttcgg ggcgggagat cgcgttggaa
     1381 gcatcgtaac cgaagcccaa agtcagatga tgtttcgtcc atttgttttt cagcgatttc
     1441 tcaaacgagg cattcaaaac attgtgctgt tcgcggtagt ggaaacggtc gctgctgtcg
     1501 taggaatacg gtttgtccgc cgacgcgcgg caggatttgt ccacggcagg atacacggcg
     1561 caattcagct tcagcgtgtt gttgtcggtt gccacgccct gtttgtcaaa cgacaacacc
     1621 gccttgtccg cccagttgtc agaatacgct tcgttttcat aacggtacag caaacccata
     1681 cggcggcggc ggtgatgttc atcaataaat ttggtgcggg aatatttcaa acctatgccc
     1741 ttgaccaaat ttttatcgcc cttccactct tctatattcg gcctaaaata caagccgtcg
     1801 cggaaatcgt ctccgtcgta caccccgctc ttgtcgctaa actttttcgc ctcgtccgta
     1861 ccgtaatact gtttttccgt catatcgcgg atgtcgtaac gctgtttggt atcctcaaac
     1921 acgccgccga cataatgcct gccaccgaag cggtagccca gcttggcaag ccacgaaccg
     1981 ctgcggtaat ccatcggatc gggcaatatc ctgccgccgc ccgtgtaagc ttgggcggac
     2041 aggttttcgt ggcgcgcctg cgcctcccgt accatcgctt cttcttcagc acttaaaggc
     2101 tgattgtttt tcttacgttc ttccacccag cggttgagct ggtttttcaa atagtttccg
     2161 ttgcccgcca attttgccac gggcttgggt tcacgctcgc cctccgctaa gaaatattcc
     2221 gcctttttat tctgcttctg aatatcgtat gtctggcgga acgcgtccaa acggtctatg
     2281 ccgtattcca ccccgtccgc aatatcgccg tgcgggcgcg tttcccgccc ttggcgttcg
     2341 gttcggatta gcagcccttc ccaaccgtct ttgctgaacc ccgcgccgag cgacttcata
     2401 aattggcggt ttttactgcc gtaggcagtt tttgcctgta tcccccagct tttgccgtct
     2461 gaaatcaggt ctgccgcctc tttggtgcgg aaggcgaccg cgccgccgag cgcgccgctg
     2521 ccgtgatcgg acgaaccggc acctttgtcg atttccaccg tgctgatgtt ttcatattcg
     2581 atttcgttga ttgcgccgct gccgccgcgt ccgccgtatc cgctcaacga tccctgcacg
     2641 gtaaacgcct gtatttgggc aacgccgtca accgaaaccg ccacacggtt tttatccacg
     2701 ccgcgtatcg agtagccgcc gctcgcgccg ttgccctgtt cgacaaccgc cacgcccgga
     2761 tcgtagcgcg tcaggtcgcg gataccgagt acctgttctt tgttcaacgt ttccgacgtt
     2821 ttgacgattt tgcccaaacc ggtcgcctct ttcgatcgcc gtcccacttt ggcggcacgg
     2881 acggtaacct ctttcaggga ttgggtctgc gccgcatcag gtgtcgccgt ttcagggttt
     2941 gccgcatatg acgggaaggc ggcggcaaca gccaaggcag tcagggtaag cgggaatgta
     3001 tgctttctgt tcatcgtgtt gcctccttgt catctttctt cgcaccgaat accgcgccga
     3061 atttccggtc gctgtcgata atattaccgc ccaattccgc cgcctgcggt ccataaaagc
     3121 cgcctgttac aagaagattg ttggcttcga agcgctgcgg gttggtcgaa ccctgcccgg
     3181 aaaggtcaat accgttatcc cgagtgcgtg ctgtcgcgtg gaaaccgttg ccatcaatca
     3241 cacctttttc aatataaaca gcggggtgtg tatcattttt ttctgtcaac gttccggaaa
     3301 tcgatttctt gccgaaatca acggtaaatt gtgcttttgc cccttgattt gcatagctat
     3361 ccttttgaat gaacgtagtg ccatataact gatcgtcttt cttatccggt acaccgatac
     3421 gcgcttccca agtgccggta taatgcgccg ttccggtttg cggaatgtcg gcttccgccg
     3481 tgcggatacc tttcaggaaa aggtcgatat ccctgccttt agaggcttcc gggacaggca
     3541 ggatggcgtt tgaactgccg ttgccttctg ccgacgattc ttcttcaggt tcttcagctt
     3601 cgtcttcttc gccgtcttcg ttttctgtgg cttcgtcttc ttcgctgcct tcatctcctg
     3661 cggctgcatc ttcggtgcct tcttcttcat cgccgatttc gtcttcgctt tcttcgccat
     3721 tatcaatgtc cgaatcctct tcgtcctgcg ccttcggttt ggcggcgggg cgttcggttt
     3781 ttatccgtcc gagtttcaca taggtcaaaa agtcgcaaca agcactgacg gtcattttcc
     3841 tgccgtcggc aagctcgatg gttttctctt ggctaaccaa aggaatttca cgcccttcga
     3901 caagaagttt gtcgggatga ccaaaatcgg gcatagtgga aatggcaaac ttacgggcat
     3961 ggtcatcagt cgcctcgtca acggaaattt tcagagaatc caagattttg gtgtgttttc
     4021 cagacggcag ggcaggtttt gtgcctgatg cgtctgtttt ttgtttgcct gcgaatacgc
     4081 cgaatacgct gttgtcgttg ctgataaacc gtccggcaag ctcttctccg ttatcgccga
     4141 aaaaaccgcc ctcaagccgc tgatcggcat cggcatggaa aaacaaacgc tcattaccgg
     4201 caaggttttt cgctaaatca ggattgacct tggcactgcc ggtaaagcgg ttgccgtcca
     4261 attttgcagt aatgtcgtaa atggtcagcg gttttttggg ttcatctaga ttatttttat
     4321 ttcgcacata ctgattttta atcagcttgc cattcatggt tttgttatca aaatcaaccg
     4381 tatatttggc aggatgcttt tccctttcgt cgacatcctt agccgcataa gaagttgcac
     4441 caacatcgtt accataaaat gtgatataac ccaaattgtc aatgccaacc gcctgacctg
     4501 ctcgatgacg tttggcatca gtcatatatt gccagttgcc gaaatatttt acctttcccg
     4561 cgctcggtaa agattgcgaa ggatgttctc cggaataata tacaaaaccg tcataaccta
     4621 agcggttgga aaactgcttg tgatctgaag tccacttaat ttcatctttt ccctttacat
     4681 atacataacc tgcatctaca aatttataat catatttttt attttcattt tctgatgtcc
     4741 taatttctac atcgggatca cgtttatgaa tttcgctttt aagttgttga agtttatttt
     4801 cttttgaacc gtataaaaac agaacatcac cttctttaaa cgacagctgt tcttctgctt
     4861 gtttgctatc gggaattacc gtgccatctt cacgatgaaa agcagtattc cgccttggca
     4921 gccgcattgc cgcaccgacg gcgggccggt tgaccggcgt ggtttctacc gaaggcccgg
     4981 cagggggcga agtgggaacg tccttagact tgaaagtgac ggggtacgcg gtcggcgttg
     5041 attcgacaac aggctgcacg ccgaaattgc cgccaataca agatgccaaa agtaagggca
     5101 acaagacaat gccgccataa ttcggtttac acatccctac ttttcctcct atttgattaa
     5161 taataattat cattatatta atatgtacag ataatatcaa cccgttttta tagtgaatta
     5221 acaaaaatcc ggacaaggcg acgagccgca gacagtacag atacatcccg tcattcccac
     5281 gaacctacat cccgtcattc ccacgaacct gcaccacgtc attcccacga acctgcacca
     5341 cgtcattccc acgaacctac att
//
LOCUS       DAXHRP010000144         5234 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.144, whole genome shotgun sequence.
ACCESSION   DAXHRP010000144 DAXHRP010000000
VERSION     DAXHRP010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5234
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.144"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            86..1561
                     /gene="trpE"
                     /locus_tag="ACFM72_001762"
     CDS             86..1561
                     /gene="trpE"
                     /locus_tag="ACFM72_001762"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HFC6258296.1"
                     /translation="MISKQEYQAQAAQDYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKAAPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKEGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPGKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPESEWQETQNKARAVIHAAQMVQEGLDK"
     gene            1558..2103
                     /locus_tag="ACFM72_001763"
     CDS             1558..2103
                     /locus_tag="ACFM72_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HFC6258297.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKNREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTQQTGIRANT
                     QTDFSKFKGCLEDADMIILAWGTDRSAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            2100..3236
                     /locus_tag="ACFM72_001764"
     CDS             2100..3236
                     /locus_tag="ACFM72_001764"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HFC6258298.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTIAAKTMGYKVTVLDPDPDA
                     PAAEFADRHLCAPFDDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKSWIRKAGLQTAPYQAVCKAEDITEASTQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            3283..3765
                     /locus_tag="ACFM72_001765"
     CDS             3283..3765
                     /locus_tag="ACFM72_001765"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC6258299.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            3871..4926
                     /locus_tag="ACFM72_001766"
     CDS             3871..4926
                     /locus_tag="ACFM72_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6258300.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDLARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEKKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            4932..5216
                     /locus_tag="ACFM72_001767"
     CDS             4932..5216
                     /locus_tag="ACFM72_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258301.1"
                     /translation="MPSEPPFRRHFTHQNRKTAPKIIITKHNGKPDTKPNTAAKMPSE
                     AVGATILIWGPLQGRITFLNHPFDSQINSAFACQKQNQYFAVRIGTFIVD"
BASE COUNT         1496 a         1603 c         1114 g         1021 t
ORIGIN      
        1 cggttagact gtcaacaatt ccgataaaat gctatactcg cgcccattgc cgcgccgtcc
       61 gaaaccgccc tttgggaaag cagaaatgat cagcaaacaa gaataccaag cccaagccgc
      121 ccaagactac aaccgcatcc cgctcgtgca agaacttctt gccgacttgg atacgccgct
      181 ttccctctat ctcaaactcg ccaaccgccc ctatacctac ctgctcgaat ccgttgtcgg
      241 tggcgaacgt ttcggccgct attcttttat cggcctgcct tgcagccact atctcaaagc
      301 cagcggcaaa cacgtcgatg tttatcaaaa cggcgaaatc gtcgaacaac acgacggcaa
      361 tcccctgccc tttatcgaag ccttccacaa ccgcttcaaa acgcccgaaa tcccaagcct
      421 gccgcgcttt accggcggac tggtcggcta cttcggttac gaaaccatct acaattttga
      481 acacttcgcc caccgcctga aaaacaccac caaagccgcc ccgctcggca cgcccgacat
      541 cttgctgatg ctgtcgcaag aattggcggt gatcgacaat ttgagcggca aaatccatct
      601 cgtcgtttac gccgatccgt cgcagcccga cggctacgaa cgcgcccgcg aacgcctcga
      661 agacatccgc acccagctgc gccaaagctg cgccatccca ctctcgctcg gcagcaaaca
      721 caccgaagcc gtcagcgagt tcggcgaaga gccgttcaaa gcctgcgtcg ataaaatcaa
      781 agactacatc ttcgcaggcg actgtatgca ggtcgtcccc agccagcgca tgagcatgga
      841 attcaccgac agcccgctcg ccctctaccg cgccctgcgc acgctcaacc cttcgcctta
      901 cctcttttac tacgatttcg gcgatttcca catcgtcggc tcctcgcctg aaatcctcgt
      961 ccgccgcgaa cgcgatgacg tcatcgtccg ccccatcgcc ggcacgcgcc tgcgcggcaa
     1021 aacacccgcc gaagaccttg ccaacgagca ggacttatta agtgacgcca aagaaatcgc
     1081 cgaacacgtc atgcttatcg atttagggcg caatgacgtc ggccgcatca gcaaaacagg
     1141 cgaagtcaaa gtaaccgata aaatggtgat tgaaaaatac tcccatgtga tgcatatcgt
     1201 ctccaacgtc gaaggccgtc tgaaagaggg catgaccaat atggacatcc tcgccgccac
     1261 cttccctgcc ggcacactct ccggcgcacc aaaagtccgc gcgatggaaa tcatcgaaga
     1321 agtcgaaccg ggcaaacgcg gcatctacgg cggtgccgtc ggcgtatggg gtttcaacaa
     1381 cgacatggat ttggcaatcg ccatccgcac cgccgtagta aaaaacaaca cgctatacgt
     1441 ccaaagcggc gcaggcgtag ttgccgattc cgatcctgaa tcagaatggc aggaaacgca
     1501 gaacaaagcc cgcgctgtca tacacgcagc gcaaatggtg caggaagggt tggataaatg
     1561 acttacgaaa aactttatga gcttcgccaa acactcagac cgactaccaa agacggtctc
     1621 tatacagata atgaaaaaaa tcgagaaatc ctaacggtta gatggagcgg caacacagaa
     1681 aatcctaaaa atttctcagc tgttgctata ggaattaatc caagtaaagc aaatgatgaa
     1741 agaagcgaca aaacccttac ccaacttgca cgtttcttgg atatgtacgg ttttaccaac
     1801 ttcaaaatgt taaatatttt ttccagttac tctacacagc aaacaggaat tagggcaaac
     1861 acccaaaccg atttttccaa atttaaagga tgtttggaag atgctgatat gattattctt
     1921 gcatggggta cagaccgcag tgcttataag gatgaaaaaa acagaatact ggaatttcta
     1981 aaagcagaaa aatttatgga aaaagtattc tgtatttctg aaactggtaa ttccagcgat
     2041 acaagacatc cgtcaagaat tagttatagc tatcaacttg tacaatttga agagtcagca
     2101 tgaaaaacat atctctttct ccgcccgcca tgctcggcat cctcggcggc ggacaattag
     2161 gcagaatgtt taccattgcc gccaaaacca tgggctacaa agtaaccgtt ctcgaccccg
     2221 atccggacgc gccggcggcg gaatttgccg accgccattt gtgtgcgccg tttgacgacc
     2281 aagccgcttt ggacgagcta gcaaaatgcg cggcggttac gaccgaattt gaaaacgtca
     2341 atgccgatgc gatgcgtttt ctcgccaaac ataccaatgt ttcccccagc ggcgactgcg
     2401 ttgccatcgc gcaaaaccgc attcaggaaa agtcatggat acgcaaagca ggcctgcaaa
     2461 ccgcgccgta tcaagcagtt tgcaaagctg aagacatcac tgaagcaagc acgcaattcc
     2521 tgcccggcat tctgaaaacg gccactttgg gctacgacgg caaaggtcaa atccgcgtaa
     2581 aaacattgga cgaactcaaa gccgcgtttg ccgaacacgg cggcgtggat tgcgttttgg
     2641 aaaaaatggt ggatttgcgc agtgagattt ccgtaattgt atgccgtttg aacaatgaca
     2701 acgtgcaaac tttcgaccct gccgaaaaca tccacgaaaa cggcatcttg gcttattcca
     2761 tcgtccccgc gcgactgagt gccgacgtgc agcaacaggc gcggcagatg gcgcaacgct
     2821 tggcagacga attggattat gtcggcgtat tggcggtaga aatgtttgtt gtcggtgaca
     2881 cacatgaatt ggtcgtcaac gaaatcgcgc cgcgtccgca caactccggc caccatacca
     2941 tcgacgcctg cgcagcagac caattccagc agcaggtacg cctgatgtgc aacctgccac
     3001 ctgctgacac caaattgctg agttcttgct gtatggcgaa tattttgggc gacgtttggc
     3061 aggaagacgg cggcgaaccg gattggtttc ccctgcaaag ccggccggac gcgcacctgc
     3121 acctttacgg caaaaaaacc gcgcacaaag ggcggaaaat gggacacttt accgttttaa
     3181 ccaccgattc ggacaccgca tttcaagaag caaaaaaact gcatcagtcc ctataatccg
     3241 accaacggca cagatgccgt ctgaagccgc cgacatactg ccatgaacct gctgacactg
     3301 ttacgccccg ccaccgtgca agactgcaaa gacatcttca aagtccacct gcactccgtc
     3361 caatacacct gcatcctcag ctacaacgaa cacgccctaa aagtatggga aggcttgtta
     3421 aacacagaaa gctacctgcc gaccatttcc gatcccgaca aagcactttg ggttgccgaa
     3481 tacaaaggca acatacaggg atttttccaa atcgactgcc aagaagcaca actcgatgca
     3541 ctttacgtcc accccctgtt ccacaacctc ggactgggca ctgccctgct tcatcaggcg
     3601 gaaaccatcg cccacaaatc cggtttgagc tttctgaaac tctacgcatc gctcaactcc
     3661 gtcccgtttt accttctcaa ccgctacgaa tcgctcggtt cggcagtatt gcagcttgac
     3721 cccagcatca aaatcaaatg cgaactgatg cggaaacacc tctgatccgt ccttataacc
     3781 aaaattgata atcttcaaat caaacattat ttccacaagc gcagacagcc gtataaagtt
     3841 gccccatcta ccaaccgaca ggacaagcat atgaaaacct acgcaccggc actctatacc
     3901 gcagccctgc tcaccgcctg cagccccgca gccgattcaa accatccgtc cggacaaaat
     3961 gccccggcca ataccgaatc cgacggaaaa aacattaccc tgctcaacgc ctcatacgat
     4021 ttggcacggg atttttacaa agaatacaac cctttattta tcaaaacata ccaatccgaa
     4081 caccccggca catccgtcag catccaacaa tcccacggcg gctccagcaa acaggcatta
     4141 tccgtagcca acggccttca agccgatgtc gtaaccatga accaatcctc cgacatcgac
     4201 ctgctcgaaa aaaaaggact ggtagaaaaa ggctggcaac aagccctccc cgaccacgcc
     4261 gcgccctaca ccagcactat ggttttcctt gtccgaaaaa acaaccccaa acagatccgc
     4321 gattggaacg accttgccaa agacggcgtt aacatcgtca tcgccaatcc caaaacctcg
     4381 ggcaacggac gctacgcctt cctcggcgca tacggttacg gtctgaaagc caccaacggc
     4441 aacgaacagg aagcccaaaa actcgtcgca tccatcctca aaaacacccc cgtttttgaa
     4501 aacggcggac gcgccgccac caccaccttc acacaacgca acatcggcga cgtactcatc
     4561 acttttgaaa acgaagccaa ctacgtcagc aaaaaactga cccaaggaca gtttgaaatc
     4621 gtctatccga gctacaccat ttccgccgaa agccccgtcg ccgtcgtcaa cagcgtcgtc
     4681 gcgaaaaaag gcacgcaaaa aaccgcccgc gcctatctcg aatacctttg gagcgaaccg
     4741 gcgcaagaac tcgccgcctc actctacctg cgcccccgca accccgaagt attggcaaga
     4801 cacaaagccg acttcccaga cttagacacc ttctctcccg aaaaaaaatt cggcggatgg
     4861 gacaacatca tgaaaaccta cttcgccgac ggcggcatat tcgaccgcct gaccgcacaa
     4921 aaatgaccgc tatgccgtct gaaccgcctt tcagacggca tttcacacat caaaacagaa
     4981 aaaccgcgcc caaaatcatc atcacaaaac acaacggcaa accggataca aaacccaaca
     5041 ccgccgccaa aatgccgtct gaagccgtcg gcgcaaccat ccttatctgg ggcccgcttc
     5101 aggggcgcat aactttcctt aaccatcctt ttgacagcca aataaacagt gcttttgcct
     5161 gtcagaaaca aaaccaatat tttgcagttc gtatcggaac atttatagtg gattaacaaa
     5221 aaccagtaca gcgt
//
LOCUS       DAXHRP010000145         5180 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.145, whole genome shotgun sequence.
ACCESSION   DAXHRP010000145 DAXHRP010000000
VERSION     DAXHRP010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5180
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.145"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(89..1345)
                     /locus_tag="ACFM72_001768"
     CDS             complement(89..1345)
                     /locus_tag="ACFM72_001768"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HFC6258302.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGSQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETAFLG
                     NLKARKTEFSDSLNTAAELPQWLVEQLKQHWREEEILAFGRSINQPAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERIGSEHDARIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLAGLKIDL
                     DTGKYLRLNSARHQTDGFFAAVLQRK"
     gene            complement(1693..2034)
                     /locus_tag="ACFM72_001769"
     CDS             complement(1693..2034)
                     /locus_tag="ACFM72_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258303.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2238..3095)
                     /locus_tag="ACFM72_001770"
     CDS             complement(2238..3095)
                     /locus_tag="ACFM72_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HFC6258304.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELSVRELLGE
                     HGFRYLLALDADPTRLTDYLAQRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVARLNGKPYHIELTCKYYGGDTDSPEGMRGFDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLNVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3156..3971)
                     /locus_tag="ACFM72_001771"
     CDS             complement(3156..3971)
                     /locus_tag="ACFM72_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFC6258305.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4215..5000
                     /locus_tag="ACFM72_001772"
     CDS             4215..5000
                     /locus_tag="ACFM72_001772"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC6258306.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMSGEDGWLESGDIVAANPKVLAKMLKIISAHV"
     gene            complement(4981..>5180)
                     /locus_tag="ACFM72_001773"
     CDS             complement(4981..>5180)
                     /locus_tag="ACFM72_001773"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258307.1"
                     /translation="IVQGSPFNQIWVSIFGSFGHLAVSTFLPPLPVKMPSEISARYFR
                     RHTRPFSRIPGSGLKFKRVRK"
BASE COUNT         1179 a         1194 c         1411 g         1396 t
ORIGIN      
        1 gtactgattt ttgttaatcc actataattg atgaaatgcc gtctgaacgc tttgaaaagg
       61 gttcagacgg cattttgttc aaaccggttt atttgcgttg caatacggcg gcgaagaagc
      121 cgtcggtttg gtgtcgggcg gagttgaggc gcaggtattt gccggtatcc aaatcgattt
      181 tcaaaccggc aagcagttcg gcgcagttga cgggttcaaa ttcgggatgt tcggacagga
      241 aacgttcgac ttgcagctcg ttttcttcgg gcaggatgct gcaagtggcg tacaccaaac
      301 gtccttgcgg ttttaccagt ttggaggcgg catcgaggat gctgtgttgc tgttccaaaa
      361 ggttggcgac ggtttcggcg gattggcggt atttgaggtc gggattgcgg cgtaaagtgc
      421 ccaaaccgga gcagggcgcg tccaccaaca cacggtcggc tttgcctgcc agtcgggcga
      481 tacgggcatc gtgttcgctg ccgatgcgtt cggggtggat attggtcagt ccggcgcggg
      541 tcatacgcgg tttgaggttg gcaaggcgtt tttcggcgat atcgaaggcg tagattctgc
      601 ctttgttcgc catttgcgca ccgacagcca aggttttacc gccggcaccg gcacagaaat
      661 cgacaatgat ttcgcctcgt tttgcgccca ccaataaggc aagcagctgg ctgccttcgt
      721 cttggacttc cagtgtgccg tctaaaaaca gttcgtgttt gttaagcgcg attttgtttt
      781 tcaggcggat gccccaaggc gaataaggcg ttgcctctgc atcggcactt tcggcttgca
      841 acagcggcag cactttatcg cgtttgcctt tcaaagtgtt gacgcggatg tcgagcgggg
      901 caggctggtt gatgctgcgg ccgaaagcga ggatttcttc ttcgcgccaa tgctgtttca
      961 gttgttccac cagccattgc ggcaattctg cggcggtatt caggctgtct gaaaactcgg
     1021 ttttacgggc tttcaaattg ccgaggaacg ctgtttcttc ttcatcaagc aggtctttga
     1081 tttggctgat gttggtgctt ctgccgagaa ccagtgcggc gagagcggct ttgcgcggct
     1141 gcgcgtgcgg acggcgtagg gcggtactga ttttttgata gtggcgcagc gcggcaaagg
     1201 cggtttcggc gatttcgtgg cgatcttgac tgccgagctt tttgtgttcg cggaaatagg
     1261 cggagaggac ggcatcggca ggctgtttga aagtcagcat ttcagccaaa actttggcgg
     1321 tatggtcgag ttgtgcggcg ttcataatgt aatgggttct cttactgtgg gttattcata
     1381 atcaatctaa cgtccttaaa ataacaatag catctttatc attacttagt attctatccg
     1441 caataagaaa gatgtgttaa aagtgcgcaa tcgggatttg tctaaatttc tccgttaact
     1501 acaaaggcag cctgaaaaaa gttctatttt caggtcgctt gaacagcatc cgatataatc
     1561 acatcagcga tttcattttg taatcactcc ctaaaacatg aggaaaaaaa caaaatttat
     1621 tttcttcgtt cagtatatct atcctaaata tgccatcact ccattgagtt tttaatttgt
     1681 atttcgctct tgttaaatgt ttttctgttt gccgatttct tttgctaatg taaaaaatac
     1741 tctaccactc tcattggtta aagttttcaa gtattcatca acatcagtaa cattaataac
     1801 aactgtttca tttgtatgtt tattaaattc taaatcaata ataatattcc cattaaccaa
     1861 tatttcatat atatcttctt cttcagggag catagacaaa caataagcac ttgaagctga
     1921 aaactctttt ttcagatact gaagaagaaa agtattttta attaaaatat tattaaattt
     1981 atctaatgat tgcttgactt ctttagttgt ccaattttta acattattct tcattgtatt
     2041 ctacctgggg tcgtagttat taaattacca tacttatttg tttggatcgt cataatatta
     2101 gttggcatgt tgttgttata tttatcatat ccaatatcct tattaactcg gatgactctt
     2161 tcataaattg tatgggaaat gagatttcca tcactaagcc tctcaataga tatacgcgtt
     2221 aatgttggga aagggtttca gacggccttc ataatgcgtt cgatttcgtg ccaaaagccg
     2281 tccggccgac attccaaaac ggcaatcaag ccttggtcga tacggcggat ttcggttgcg
     2341 ttcaatgttt cggtttcggc gacacgcgca ggcgcgaggt aggccatacg gtcgagcaga
     2401 tggtagcgga cttcttggcg tttaaacccg tattctgccc aatcttgaat atagatgccg
     2461 cgccaaccgt atggattaag cggtggctca aaagcatgga aaccgtgtgg aaaaaatccg
     2521 atgccgcgca cgatggaaac gggttttacg ttaagcggca aaccgtgctg ccgcaaggtc
     2581 cggatgccgt ctgaagtgtg cggcagaccg agttgggcgg tcagtttggc ggcttttccc
     2641 aacagcgtgt ctttggggtc gaatccgcgc atcccttcgg gactgtccgt gtcgccgccg
     2701 taatatttgc aggtcagctc gatatggtag ggtttgccgt taagccttgc cacaaaatcc
     2761 gccgcgcctt gcgtattgcc gtccgaaccg gaaaccgtga ggttgtgcgc gagcagttcg
     2821 gcgtgcggtg cattggcaaa ccaaaaagcc agcagctctt cggcataaat gccgagacgg
     2881 tggccgaacg gggcgcgttg ggcgaggtaa tccgtcagcc gcgtgggatc ggcatccaat
     2941 gccaaaaggt aacggaaacc gtgttctccc agtagttctc gcacgctcaa ttcgcagccg
     3001 ctttgccaca aaggcggcgc agtcagcagc gaggcaaggt cgcggacggg ttggctggta
     3061 agtttccacc ataatgcgtc tagggcgtaa ttcatgctta tccgaatatc agtcatgccg
     3121 tctgaaaagc tggaaatgtt ttcagacggc cttaatcagt cttttttatg gatacggtgg
     3181 ctgacggtat tgaaaaaacc gcgcaggata tcgatgtctt cggtttgcgt attggcgcgg
     3241 ccgaacaggc tctgcatacg gcgcatcaga cgctcgccgt tgcggcggtt gaaaaagccg
     3301 atgtcgttca tcacgctttc catgtgggcg accatgcctt tgatttgctc gtgggtcgca
     3361 gcgtggtctt cttgttgaag atgggtcatg ggcgaaccgg tttggctgaa gatttcgtag
     3421 cacacgacct gcacggcttg ggcgaggttg agcgagaaat agtcgggatt gccgttgatg
     3481 gtcatcagtc ggttgcaggc ttggacttct tcgatgctca agccgaaagt ctcgttgccg
     3541 aaaaccagtg ccactttctc gcctcggttt gcggtctgca gtaattcgga taccaaatcg
     3601 cgcggggttt gcagcggcgc agtaatttcg cggcggcggc tggtcagggc gcaggcgatg
     3661 gtggtgtcgg caagggcttc gtccaaagaa gcggcaatgg tggcattttc caaaacgtct
     3721 gccgcgccgg aagcgaggat gaagctttct tccggtaatt taaacgattg aggatgctcc
     3781 gggtcaaaca cgggcgggtt ttccgtcatc ggcgttgcca tcagatttgg ggcgacgatg
     3841 gtcagtttgt gcagacccat tgttttcatc gcgcgcgcgg cagagccgat gttggcggga
     3901 tggctggtgc gcgtgaggat gatgcggatg ttgtccagat aagcgggcag ggcgggtttg
     3961 agagtagtca tgttcggttt tcggtcggaa tggaataggg tataatgcgc cgtctttttc
     4021 gttcggacgg tcaaatgccg tctgaaatgt tctttaacaa cgtcggaaat ttaacgttgc
     4081 gcctgaagca gacacgcgtc aggcggtatt ttacccgatt tggcaggatt taccccaacc
     4141 aaataaactc cgattttgcc gctccgaagg actgtacgtc cgaaccggcg gtatgccacc
     4201 cttaaggaaa tctgatgaat ccgtttttga atacagcctt taaagccgcc cgccgtgccg
     4261 gtcagatgat gatacgcgcc gcgggcaatc tcgatgccgt caaaaccgac agcaaagcct
     4321 tcaacgattt tgtttccgat gttgaccgca attccgaaat catcctggtt gaggctttga
     4381 aagaagccta tccgcaccac aaaatcactt gtgaagaaag cggctcccac ggcaaagccg
     4441 cagccgagta cgaatggatt atcgatccgc tcgacggcac gaccaatttc cttcacggtc
     4501 atccccaata cgccatctct atggcgctgc tgcacaaagg cgtgttgcaa gaagctttgg
     4561 tttacgcccc cgaacgcaac gacgtatata tggcttcgcg tggcaaaggc gcgttgctca
     4621 acgaccgccg catccgcgtt tccaaccgca tcgaactgaa ccgctgcctg attggtaccg
     4681 gcttccctgt tgtcgatcaa agcatgatgg acaagtatct ggcgattttg aaagatttct
     4741 tggcaaaaac cgccggcggc cgtcgtgaag gtgcggcttc tttggatttg tgcgccgtag
     4801 caacaggacg ttttgacggc tttttcgagt ttaacctcaa accgtgggac attgccgccg
     4861 gtgcattgat tgttcaggaa gcgggcggta tcgtaaccga tatgtcgggt gaagacggct
     4921 ggctggaaag cggcgatatt gtggctgcca atcccaaagt gctggcgaaa atgttgaaaa
     4981 tcatttccgc acacgtttaa atttcagccc gctcccggga atgcgggaaa acgggcgggt
     5041 atgccgtctg aagtatcgcg ccgatatttc agacggcatt tttactggca gcgggggcag
     5101 gaaggtggaa acggctaaat gcccgaaact gccgaagatg gaaacccata tctgattaaa
     5161 cggagaaccc tgtacgattt
//
LOCUS       DAXHRP010000146         5172 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.146, whole genome shotgun sequence.
ACCESSION   DAXHRP010000146 DAXHRP010000000
VERSION     DAXHRP010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5172
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.146"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(27..443)
                     /gene="dksA"
                     /locus_tag="ACFM72_001774"
     CDS             complement(27..443)
                     /gene="dksA"
                     /locus_tag="ACFM72_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HFC6258308.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(590..1399)
                     /gene="proC"
                     /locus_tag="ACFM72_001775"
     CDS             complement(590..1399)
                     /gene="proC"
                     /locus_tag="ACFM72_001775"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HFC6258309.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRE
                     RLEKELGVETSATLPELHSDDVLILAVKPQDMEAACKNICTNGALVLSVAAGLSVGTL
                     SRYLGGSRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVTLAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1430..1838)
                     /locus_tag="ACFM72_001776"
                     /pseudo
     CDS             complement(1430..1838)
                     /locus_tag="ACFM72_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
     gene            complement(1838..2524)
                     /locus_tag="ACFM72_001777"
     CDS             complement(1838..2524)
                     /locus_tag="ACFM72_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFC6258310.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2644..3687
                     /gene="pilT"
                     /locus_tag="ACFM72_001778"
     CDS             2644..3687
                     /gene="pilT"
                     /locus_tag="ACFM72_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HFC6258311.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3850..5076
                     /locus_tag="ACFM72_001779"
     CDS             3850..5076
                     /locus_tag="ACFM72_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC6258312.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEISAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1280 a         1616 c         1168 g         1108 t
ORIGIN      
        1 ttcggacggc attttgtttg ccgccatcag tcggcaaact gttttttcat cctctctcgg
       61 cgttcttggg actcaacaga taaagtggct gtcgggcgtg ccagcagccg cttcagaccg
      121 ataggctctc ccgtatcggc acagaatcca taatcccctt catcaatatt gcggatggtc
      181 gcctgtattt tactgagaag ttttcgttcc cgatcgcggg tacggagttc caatgcgtac
      241 tcttcttcct gtgtggcacg gtcggcagga tcgggggctg attcgtgttc ttggagatgc
      301 cctgtcgtag cggaagcatt ttcgatgagt tcgtcttgca tttttaccag caattcgcgg
      361 aaaaaagcca aatggtcgtc attcatataa tcgtcttccg gcccgctcca attcaaaata
      421 tcttgttctg tcagctttgc cataatgtat atcctctcgg ttcaccgaaa aaaacaaagc
      481 accacaaagt ggctttattc ctttgatttt tataaggctt attgcctaag gcgtttttga
      541 aaacgcgcat cataacacgt tttggattgg tttttttatt ttctttacat tattgatatt
      601 gccgttccat ttcctgcgaa cggcgcacac aggcacaaac gccctcgctt atggcttcgg
      661 cgacacgatg ccgcctgaaa gcttccacgg cttcgtgggt tgtcccgcct tttgacgtta
      721 catttttttg aagcttctcg aaatcttcac ccgtctgctc ggcaagggta accgctcctt
      781 taaacgttgc cagactgagc gcgcgtgctt ctgccatatc aaacccttgt cggatggcgg
      841 cattttgcaa tgcgtccagc agataaaaca cataagccgg tccgctgccg ctgataccgg
      901 taatgctgtg catttgcgct tcatcttcca accaaacggt caaaccgact gatttcatga
      961 ttcgatcggc aatcctgcgg tctgtttccg atacttccgc ttcggcatac ataccggata
     1021 cgcccagtcc tattttcccg ggcgtattcg gcataacccg gacaatgcgg cggcttcccc
     1081 cgaggtaacg gctgagcgta ccgactgaca atccggctgc gacagaaagc accaatgcgc
     1141 cgttggtgca gatatttttg cacgcggctt ccatatcctg cggtttgacg gcaaggatta
     1201 aaacatcgtc ggaatgaagc tccggcaggg ttgccgaagt ttcgaccccc aactcttttt
     1261 ccaaacgttc gcgtttttcc gcaccccgat tggctatata gatgcggtaa ccgccttgtt
     1321 tgaccaatcc gcccgcaacg gcagccgcca tattgccgcc gccgagaaaa taaacattca
     1381 ttatttctac cctattcaaa attacctgac taaattcatt cccaattttt taccatcgga
     1441 cgcgctcgga cagaccgttg cgccgcaacc cctgcttttc caagcagtca aatcctccct
     1501 gtttgaacgt ctcaatcaaa ggtttgccgt cacgcgtacg ccaatccagc ccgcaggctt
     1561 caaacttccc tattttcctg taaaagtaag attgttgtgc ggattcatat tcgtttgccc
     1621 tgacggaacg attgccgtct gaaagcggta tctcgtagtc ctctaaagac ggcggactct
     1681 cgccgccaat atcccaaaaa tcgatggcag ccggttttct cggcttacac cagccggaca
     1741 gggacgaaca ctcaatacca acccgccaac cggcagcctg caaccgtaaa tgcaagcaac
     1801 gcagccattg ccgtatattt tattgcccga atttccatca gccccttttc ccgaaaatcg
     1861 cgctgccgat acggacgtgt gtcgcaccgc actcaatggc ggcaggcata tcgtccgaca
     1921 tccccataga cagcacgtct gccttaacgc cagccgcatt gaggtcggca agcagtttcc
     1981 gcatcgtttg aaattgcacc ttcaactccg tttcactgct gttggctttg gcaacacaca
     2041 tcagtccgcg tacgacgata ttcggcagct tcgccacttc cacagcaagc gcgactgctt
     2101 cttcgggcgc gacaccgtgc ttcaccgcct cgcccgcaat gttcacctca atacacacct
     2161 gcaaaggcgg cattgaggaa ggacgttgcc cgctcagccg gacagcggtc tttagacggc
     2221 atacggtatg cacccaatgc gcgcgttcgg cgacaaactt ggttttgttg gactgcacat
     2281 cgccgatgac gtgccacacg atgtcggtca aatccgccaa ctcttccgtt ttgccgtacc
     2341 actcctgaat atagttctcg ccgaaatcac gctgtccggc ggcgtaaact tcgcggatgc
     2401 cgtctgaagg gaaagtctta ccgacggcaa tcaggctgac ggaatgcggc ttccttcccg
     2461 cctgcagaac caattttcca atacggtcgg acacctcccg ataacgttct tgcaacaccg
     2521 tcatagatta tcccctaatt aaaaatgatt aaacagttga aacccctcca gtcagggcgg
     2581 tacaatcaag gttgttagaa ccattccaac caatcgaaac attatactaa acagagccgc
     2641 attatgcaga ttaccgactt actcgccttc ggcgctaaaa acaaagcatc cgaccttcac
     2701 ctgagttcag gcatatcccc tatgattcgg gttcacggcg atatgcggcg catcaacctt
     2761 cccgaaatga gcgcggaaga ggtcggtaat atggtaactt cggtgatgaa cgaccaccag
     2821 cggaaaatct accagcaaaa cttggaagtc gacttctcgt tcgaactgcc caacgtcgcc
     2881 cgattccgcg tcaacgcctt caacaccggc cgcggtcccg ccgccgtatt ccgcaccatt
     2941 cccagcaccg tcttatcgct ggaagaattg aaagccccga gcattttcca aaaaatcgca
     3001 gaatcgccgc gcggcatggt attggttacc ggccctaccg gttcgggcaa atcgaccacg
     3061 cttgccgcga tgatcaacta catcaacgaa acccagccgg cacacatcct gaccatcgaa
     3121 gacccgatcg aattcgtcca ccaaagcaaa aaatccctga ttaaccagcg cgagctgcac
     3181 cagcacaccc tcagcttcgc caacgcgctg cgttccgcat tgcgcgaaga ccccgacgtt
     3241 atccttgtcg gcgagatgcg cgaccccgaa accatcggct tggcactgac cgccgccgaa
     3301 accggacact tggttttcgg cacgctgcac acgaccggcg cagcaaaaac cgtcgaccgt
     3361 atcgtggacg tattcccggc gggagaaaaa gaaatggtgc gctctatgct gtccgaatcg
     3421 ctgaccgccg tcatctccca aaacctgctg aaaacgcacg acggcaacgg ccgtgtcgcc
     3481 tcgcacgaaa tcctgattgc caaccccgcc gtccgcaacc tcatccgcga aaacaaaatc
     3541 acgcagatta actccgtcct gcaaaccggg caggcgagcg gtatgcagac aatggaccaa
     3601 tcgctgcaat cgctggtgcg ccaagggctg atcgcaccgg aagtcgcacg cagacgcgcg
     3661 caaaacagcg aaagtatgag tttctgacac acaaccgcct tccggccata ccggcgggaa
     3721 aacaaggcgc aaacacgcgg ggcgggacgc agcatcccgc ccggctacct ttccgaacaa
     3781 gaagcgtccg ccttcctgtt gaaacctgcc gccgcaaact gcaaggctta aaccgaaaag
     3841 aagctaacga tgaataccga taacctgcac gacatcttgg acgaaatggt tcaagtgtat
     3901 tctcaaaaaa aacaaagccg atccgaaacc ccggccgaaa tcagcgcaca cttccacccg
     3961 ctgctcgacc gcctgtgcga aaccgcagaa gcacaaaacg cgtccgacat ccttatcagc
     4021 aaaggattcc cgccctcgtt gaaaatcaac agcgcattaa ccccgcagcc gcaaaaggcg
     4081 ctgacgggcg aggaaaccgc cgccatcgcc gcatcgacga tgaacgccga acaatcggaa
     4141 atattccggc gcgacggcga aatcaactac tccgtccagt cgcgcagcgg cacgcgctac
     4201 cgcgccaacg cctaccacag ccaaggcagc gcaggtttgg ttttgcggcg catcaaccac
     4261 gtcatcccgc aaatgcagga attaggcctg cccgaaaaac tcaaagacct cgccgtcgca
     4321 ccgcgcgggc tgctgattat cgtcgggcct accggttcgg gcaaatccac cacgatggcg
     4381 actatgctcg aacaccgcaa caaaaccctg cccagccata tcgttaccat cgaagacccg
     4441 attgagttta tctacaaacc gcgccgctgc atctttaccc agcgcgaaat cggcgtcgac
     4501 accataaact ggcagacggc ggtacaaaac gctatgcgcc aatcccccga cgtggtctgc
     4561 atcggcgaag tccgcagcag ggaaagtatg gaatacgcga tgcagctcgc ccaaaccggc
     4621 cacctgtgca tttttacgct ccacgccaac accgcgccgc agtcgctcga acgcatactc
     4681 aacttctacc ccaaagaaca gcacaaccaa atactgatcg acatcgccct caacctgacc
     4741 ggcatcatct gccaacgcct cgccctcaaa caagacaaaa cgggcaggac ggcggttgtc
     4801 gacttgctca tcaacacgcc cgccatccaa gacttcatcc tgaagggcga cctgatgaac
     4861 atcagtaaaa tcatggaaac cgccaaaacc gacggaatgc agacgatgga tcaaaacctt
     4921 ttcgaactgt accgtcacgg catcatcagt tacgaagaag ccctgcgcca gtccgtttcc
     4981 gccaacaacc tgcgattgca catccaactg cacaaagaag gcaaaacgcc cgaactcctt
     5041 tacgacaggg tcaacggtct caacctcatt tcctgatccg caaaacccaa tgccgtctga
     5101 aaaccgcatc cccgttttca gacggcatga ttttatccgc cccattcatg tgctacactt
     5161 tatagtggat ta
//
LOCUS       DAXHRP010000147         5086 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.147, whole genome shotgun sequence.
ACCESSION   DAXHRP010000147 DAXHRP010000000
VERSION     DAXHRP010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.147"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            242..1474
                     /gene="pilG"
                     /locus_tag="ACFM72_001780"
     CDS             242..1474
                     /gene="pilG"
                     /locus_tag="ACFM72_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HFC6258313.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            1548..2408
                     /locus_tag="ACFM72_001781"
     CDS             1548..2408
                     /locus_tag="ACFM72_001781"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HFC6258314.1"
                     /translation="MSDLSVLSPFAVPLTAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            2410..3042
                     /gene="coaE"
                     /locus_tag="ACFM72_001782"
     CDS             2410..3042
                     /gene="coaE"
                     /locus_tag="ACFM72_001782"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HFC6258315.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHND"
     gene            3035..3244
                     /locus_tag="ACFM72_001783"
     CDS             3035..3244
                     /locus_tag="ACFM72_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HFC6258316.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(3329..5005)
                     /gene="pilB"
                     /locus_tag="ACFM72_001784"
     CDS             complement(3329..5005)
                     /gene="pilB"
                     /locus_tag="ACFM72_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HFC6258317.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         1220 a         1407 c         1262 g         1197 t
ORIGIN      
        1 tttttgttaa ttcactatac cctccggccg gcatttgacc cgcaacaata tcctgcaaga
       61 tttattgtgt acgcataaat gccggacagc cgcctaaata aggtataatc gcatccgatt
      121 ctgtcccgtt tgccgcccgc aggcgggatg tcggcggttt tcatcttacc gggaacacgc
      181 cggtactgtt ttttaacgat gtttcttaca ttttattcca attactttac ggggctagaa
      241 tatggctaaa aacggaggat tttctttgtt cgcaaagaaa gaaaaacgct ttatctttga
      301 aggcaggcat tccgcctccg acaaactggt caacggcgaa gtatccgcgt ttaccgaaga
      361 agaggcgcgc aaaaaactgg caaaacgcgg catccgcccg ttgcagatta cccgtgtgaa
      421 aacaagctcc aagcgcaaaa tcacacaaga agacatcacc gttttcaccc gccagctgtc
      481 cacgatgatt aaagcgggcc tgccgctgat gcaggcattt gaaatcgtgg cgcgcggaca
      541 cggcaacccg tctatgacgg aaatgctgat ggaaatccga ggcgaagtgg aacagggcag
      601 ctcgttgagc cgcgcattct caaaccaccc aaaatatttc gaccgcttct actgcaatct
      661 ggttgcggcg ggcgaaacgg gcggcgtatt ggaaagcctg ctggacaaat tggcaattta
      721 caaagaaaaa acccaggcca tccgcaaaaa ggtaaaaacc gcgctgacct atccggtatc
      781 cgtcatcgcc gtcgccatcg gtttggtatt cgtgatgatg attttcgtac tgcccgcctt
      841 taaagaagtt tacgccaata tgggcgcgga gcttcccgca ctgacccaaa cagtgatgga
      901 tatgtccgac tttttcgtct catacggctg gatggtgctg atcgcactgg gctttgccat
      961 atacggcttc cttaaattga aggcgcgttc gattaaaatc caacggcgta tggatgccat
     1021 actgctgcgt atgccgattt tcggagacat tgtccgcaaa gggacgattg cccgctgggg
     1081 caggacgacg gcgacgctga ttgcggcagg cgtgcctttg gtcgatgtat tggactccac
     1141 tgccggcgcg gcgggcaatt taatctatga agaagccacc cgggaaatcc gtacgcgcgt
     1201 catccaaggt ttgtctatga cttcggggat gcgtgcgacg gaactgttcc ccaatatgat
     1261 gttgcagatg tcttccatcg gcgaggaatc gggttctttg gacgatatgc tcaacaaagc
     1321 cgccgaattt tacgaagacg aggtggacaa tgcggtcggc aggctgtccg ctatgatgga
     1381 gccgatcatt atcgtgattt taggcttggt catcggcacg cttctggtcg ccatgtatct
     1441 gccgctgttt aatttgggca acgtggtcgc ctgatttgcc gcacagatcc ggcgcggatt
     1501 cgctctgcgc cggtttgttt ttgttttgaa tacattgaga acaaaatatg tctgatttgt
     1561 ctgtattgtc gccgtttgcc gtgcctttga cagcggtgtt cgggctgctg gtcggaagtt
     1621 tcttaaatgt cgtcatttac cgcgtgccgg tcatgatgga acgcggctgg acggtatttg
     1681 ccaaagaata tttaaacctg ccgctgaccg aagaggaaag ccgtaccttc aacctgatga
     1741 aaccggattc ctgctgtccc aaatgccgcg tgccgatacg cgcgtggcag aacatcccga
     1801 ttgtcagcta cctgctcctg cgcggcaaat gcgcctcctg ccaaaccaaa atcagcatac
     1861 gctatccctt aatcgaactg ctgaccggcg tattgttcgg gctggttgcc tggcaatacg
     1921 gctggtcttg gattacattg ggcggtttga tactgaccgc gtttctgatt tccctgacct
     1981 ttatcgatgc ggacacccaa tacctgcccg actcgatgac attacccttg atttggctgg
     2041 ggctgatatt taatttggac ggcggcttcg tgcctttgca gtctgccgtt ttaggtgcgg
     2101 ttgccggcta tggttcgata tggcttttat gcgcggtata taaactgatt aaaggcgaaa
     2161 tcggtatggg caacggagat ttcaaactga ttgccgcatt gggcgcgtgg ctcggcatat
     2221 ccgcattgcc cgtgctgatt tttgtttcct cgctgatcgg tttggtcgcg gcaatcgtta
     2281 tgcgcgtcgc caaggggcag cattttgcct tcggccccgc actgacagtt tcgggctgga
     2341 taatttttac ggcaaacgat tccgtatggc gggcggtcaa ctggtggctg acccatccgg
     2401 tgctgtaaga tgacggtatg ggtcggactg accggcggaa tcggcagcgg caaatcggca
     2461 gccgcgcaat gttttgccga tttgggcgta ccgcgtatcg atgcggatgc ggcggcgcac
     2521 tcgctgacgg cttcagacgg catcgccctg ccggaaatca ggcggctgtt cggcgacacc
     2581 gttttcgaca cacagggttt gttgcgacgc gacatattgc gtaaagaagt ctttgcctcc
     2641 ccatcgcgaa aagccttgct cgaatccgtg atgttgccgc tgattttctc agaaatcaaa
     2701 aaacagcaag aaacctttac cgatgcggct tacggcattg tcgaaattcc gctgctgacg
     2761 gaaaagcgtc aatttatcag cctgatacgg cgtgtcctga ccataagcgc acctttggaa
     2821 aaacgtatcg gcagggtgat ggcccgcagc gggctgacgc gcggcgaggt ggcggacatc
     2881 atcagccatc aggcatccga atccgaacgc ctgctgcttg cagacgatgt gctgctcaat
     2941 gacggcagcc tcaaaagcct gcgtgagaaa acaatgcgcc tgcacgcgtt ttattcaggg
     3001 attttcgcct caaaaccaac acaaggaaaa cacaatgact gaatcgcggc aaacacgcct
     3061 tcaagtcaaa tgtccgacct gtcaaacagc agtagtatgg gaacccgaaa acgcattccg
     3121 ccccttctgt tcgcaacgct gcaaactgat cgacttgggc ggatgggcag acgggaaata
     3181 tacggtttcc ggccaaacgg aaagtttgcc ggaaatatcc gaacccgaca tggcataccg
     3241 ctgaccgccc cgccttcccg gcaaacaccc tgaaagtcaa atgccgtctg aaacaaacac
     3301 gcttcagacg gcattttcat tctcaaacct aatcgttggt atttgccgtt acctcttcca
     3361 atgaagtaat gccctgcata actttcaaaa taccggcccg gcgcaaatcc accataccct
     3421 ccttataggc aacgtccaaa atatccactt ccgtaccgtt gttcataatc acacgctgca
     3481 tttcttcgct gatgggcata acctcataca cgcccgcacg ccccttataa ccctgccccc
     3541 ggcaacggtc gcaaccgacg gcgcggtaaa gtttccaatc ttttgcaagg tcctcatcgg
     3601 tgaagccgac ttccttcaaa gcagaggcag acgggcgttc cacttcctgt ttgcagctcg
     3661 aacacagcct gcgtaaaaga cgctgcgcca taatcaggct gaccgaactg gcaatattaa
     3721 acggcgcgac acccatattc agcatacgcg acaacgtcgc cggcgcatta ttggtgtgca
     3781 gggtggaaaa caccatatgc cctgtttgtg ccgccttaat cgcaatatcg gcagtttcca
     3841 aatcacgaat ctcaccgacc ataatgatgt ccgggtcctg acgcaggaaa gacttcaaag
     3901 cagcggcaaa agtcaggccc tgcttatcat tgacgttaac ctgattgatg cccggcaggt
     3961 taatctcggc agggtcttcc gccgttgcaa tatttaccga ctccgtattc aaaatattca
     4021 aacaggtata gagcgacaca gtctttcccg aacctgtcgg accggttacc aacaccatgc
     4081 cgtaaggacg gtgaatcgct tccaacaaca attttttctg aaacggctca aaaccgagct
     4141 ggtcgatgtt caaagacgcg gcatcggaat tcaaaatccg catcacgacc ttttcgccaa
     4201 acagcgtcgg caatgtgctg acacggaaat cgacaggctt gccgcccttt tgaaaggtca
     4261 gctgcatcct gccgtcctgc ggtatccgtt tttcggaaat gtccaaacgc gacattacct
     4321 taatccggga agcaagctgc ccccttaccg caatgggcgg ctgaaccacc tcgcggagct
     4381 gcccgtccac acggaaacgg atacgggcat tgtgttcgta aaactcgaaa tggatgtccg
     4441 atgccccgct gcgcaaggca tccgacaaag tcttatggat aaacctcgga acagggccat
     4501 cttctgcctc ctcgttgtcg atatacaggg tgtggctttc ctcttcctcc tgcccctccc
     4561 caagctcctg aagcagcgat gtcgaacgcg aacccaccca atcgagcaaa cccgccaact
     4621 ggtcatcctc gacaatgacc aactcaacct caatccctgc ggcagaaacg gttttctgaa
     4681 tttgcggcat ctgtgtcgga tcggaaaccg caaaaaatac tttgtcgccc cgacggaaaa
     4741 ccggcacaca gtggaactcc accatctgct cctccgtcaa cacccccatc agcaccctgt
     4801 ggcgcggata atgacgcaaa tcaagaatcg aataactgaa caccctcgca atcaatgccg
     4861 caagcgactt gggcgaaatg acaccgtctg aaaacagcat cggcaacact tccttacccg
     4921 cctgcgactc attgtagtaa tgctcggcct gctcaacagt aaccacctgg ttttgaacca
     4981 gaatcctcag caaacctacg ctcatacgac cttatcccca aatttattca ttgttatacc
     5041 tgtacagctt ttatagtgga ttaaatttaa accagtacgg cgttgc
//
LOCUS       DAXHRP010000148         5063 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.148, whole genome shotgun sequence.
ACCESSION   DAXHRP010000148 DAXHRP010000000
VERSION     DAXHRP010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.148"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="ACFM72_001785"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="ACFM72_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HFC6258318.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKARLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(1643..1798)
                     /gene="rpmG"
                     /locus_tag="ACFM72_001786"
     CDS             complement(1643..1798)
                     /gene="rpmG"
                     /locus_tag="ACFM72_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HFC6258319.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(1830..2063)
                     /gene="rpmB"
                     /locus_tag="ACFM72_001787"
     CDS             complement(1830..2063)
                     /gene="rpmB"
                     /locus_tag="ACFM72_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HFC6258320.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(2313..3839)
                     /gene="farB"
                     /locus_tag="ACFM72_001788"
     CDS             complement(2313..3839)
                     /gene="farB"
                     /locus_tag="ACFM72_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HFC6258321.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVFFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGIIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKADMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSFVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHSGGDGGH
                     "
     gene            complement(3863..5035)
                     /gene="farA"
                     /locus_tag="ACFM72_001789"
     CDS             complement(3863..5035)
                     /gene="farA"
                     /locus_tag="ACFM72_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HFC6258322.1"
                     /translation="MATHADETTIQNRQEANSAKVKRKRRLTALTLLFALAAAAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEESSARAALGGDVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT         1274 a         1441 c         1218 g         1130 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggtccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtctgg gtatgtggga caaaattccc gaaaatgaaa tttacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 cgaggcgcgc ggcgaacctg ccgactgttt gggctatctt atttccaacc acaatatccg
      541 acgcgctgcc tacgaagtcg tatcccaact cgacaacatt accattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggcggcaagc gtaaaagaac agctcaaggc
      961 caggctcggc gatatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac gggaccaata tgatgctgaa
     1261 gctgtttacc aacgaaaccg caccggcaaa actgctgcgc ggcttggtat tgcgtgccgg
     1321 caacaatttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttgtatt atagtggatt aacaaaaatc
     1441 aggacaaggc gacgaagctg cagacagtac aaatagtacg gaaccgattc acttggtgct
     1501 tcagcacctt agagaatcgt tctctatcct tggcagacgg tttgcagcag attcgcatac
     1561 ggcagatgtt tcaagcggaa aagaaacacg ataaaaataa aaaagcctcc gaacagtcgg
     1621 aggctttgct ttcaaactga aattatttca gtttggtttc tttgtacact acgtgtttgc
     1681 gggcaaccgg atcgaatttt ttaatttcca gtttgccggg catagtgcgt ttgtttttgg
     1741 tagtggtgta gaagtgacca gtacctgcac tggattccag tttgatttta tcgcgcattg
     1801 cagtaatcct taattaaata gtgtttaaat taagcttcgc cgcgagcacg caaatcagcc
     1861 aatacgacat caatgcctac tttgtcgatg gtacgcagtg cagcgttgga aacgcgcagg
     1921 cgaacccagc ggttttcact ttctacccaa aaacgacgtg attgcaagtt gggcaaaaaa
     1981 cggcgtttgg ttttgttgtt ggcgtgcgat acgttgttgc cggacatcgg gcgtttgccg
     2041 gtcactttgc aaactcgtgc cataatcagt ctccaaactt ctaaaatagt aaaacgcgat
     2101 ttataccacg aaaaacagtg ttagttcaag tgttttaaag aaaaacggct gttttgcgcg
     2161 gataatcctt ccgattgtcg catctgtgga acgtttgcag gtgcgaaaca gatggggcgc
     2221 gattatagcg gatttcggga actgctgcat tcaaaatgcc gtccgaacat atttccagta
     2281 ttttcagacg gcatttcaag ttttcaaatc cctcaatgtc caccatcgcc gccgctgtgg
     2341 aacggcggtt ttgccagcca tatgacagga atcataatga tgaacagcag gctgcccgcc
     2401 ataaagattt cgttcgatcc gataataaaa ccctgctggg taatggtatt gttgatgatg
     2461 cctagggttt gaatgtcgga aacgccgtgc tgggacaaat gagcggccgt ttcgtgcaat
     2521 gttgcggaat agggcgtgat gtgttcggca aagcgtgtat ggtgcaacgc ttcacgccgt
     2581 tcccacaggg tactgacgaa tgatacgccg acaccgccca tcagcacgcg caagaaattc
     2641 gacaggctgc cggcggcggc aatctgcccg cccttcatat gcgacagtgt gatggtggtc
     2701 agcggcagga agaacatggc aacgcctgcc ccctgccaaa actgcggcca gatgacgttg
     2761 ccgatatcca tgtcggcata aaaatcggtg cgccaataga aagtaaaggc aaaggtcagg
     2821 aagctggcag ttacgagcag gcgcatatcg gccttgttgc cgaacctgcc gattaacgga
     2881 gacaggaaga cgggcaggat gccgacgggc gcggcggcaa gccccgccca cgtggaggta
     2941 tagcccaggt tggtctgcaa cactaacggc agcagggtca gcgtccccat atacaccata
     3001 aaacccaatg atgtggcaat gatgccgacg gtaaaattcc gatctttaaa cagcgataaa
     3061 tcgacaatcg gatatttttc tcccaattcc caaacaataa aatacgacaa gcacaccagt
     3121 gcgactacgc ccaaggtaat gatttctcca gaggcgaacc agtcgagttc cttacccctg
     3181 tccagcatca tctgtaacgc gccgataccg actaccatca atgtcagccc gacatagtcg
     3241 gtcggcattt taacggtttc cgtttcccga tatttcaaat gtttccatgt aatccatgcc
     3301 gatatgatac cgatagggat attaatgaag aaaatccaac cccaatgcca gtttccggaa
     3361 atccagccgc cgagtatcgg cccgagaaca ggggcaacaa cgacggtcat tgcccacaat
     3421 gccagtgcca gcgtccgttt tgcgggcgga taggatgcca ttaacaggct ttgcgacagg
     3481 ggaatcagcg gcccggcgat aaaaccctgc aagatgcgga aaaacaccaa agcctgaagg
     3541 ttgggcgcga tgccgcacag ccatgatgtg atgacgaaac cgacagcggc ggcggtaaac
     3601 aatttgacct cgccgatacg ttttgccaaa aagcccgtta acggcacgga aacggcgttt
     3661 gccacagcaa aagaagtaat gacccacgtc ccctgcgtgg ttgccgcacc gaggttgccg
     3721 gcgatgacgg gaacggcgac attggcgata gtcgtatcta aaacttccat aaatacggca
     3781 agccccaaag acagcgtaac ccacgccaat gccgcaccct taagcggtgg ataatccatt
     3841 gtgtcctccg tttcagacgg catcagggcg cggattgccc gaggatttca tcgaccgtcc
     3901 gatcgacttc cgaccagtcg gtactttcca tttccggcaa tgccgcaccc ggcgtttttg
     3961 aaacaggcgc gcctgcggcg gaagtatcca ctttaaccgt catcgacaaa ccgatacgca
     4021 acggatgcct gtccacatct tcgcggttca gcacgatacg gacggggacg cgctgcacca
     4081 ctttaatcca gttgcccgtt gcgttttgcg ccggaatcag cgaaaacgcg ctgcccgtac
     4141 ctgccgaaaa acctgccacc ctgccgcgat aaacaatttg tttgccgtac aaatcggaca
     4201 ccagctcggc aggctgtccg attttcatat gccgcaactg cgtctcttta aaattagcat
     4261 ccacccacac atccgacagc ggcaccaccg ccatcagcgg cgcgcctgcc gccacctgct
     4321 gcccaacctg caccgaacgc ttcgccacct gaccgtccgc cggcgcgcgg atttgcgtcc
     4381 gctgaaggtt caaccacgca tctttcaacc tgccgattgc cgtctgaacc gccggctgtt
     4441 cgcgcaaaga aacatctccg cccaaagccg cgcgtgccga agattcttcc gccaaagccg
     4501 ctttgaccgc cgcctgcgcc tgagacactg ccgcacgggc gtgtgccagc tcttcggcgg
     4561 acaccgcgcc cgattccgcc aaagcagacc ggcggcgcaa atcatcctgt gcgcgtgcca
     4621 aatccgcccg gcgcaaggca acctgcgccc ccgcctgcga agtggcggca ttttgccggc
     4681 ggttttgccg caccgcctga accagctcgt tttttgcccg ctcgtaagcc agcacatcat
     4741 tatcgtcgtc caataccgcc agcacgtcgc cttttttcac ggcatccgta tcgtcgtgca
     4801 aaaccttccg caccgtaccg cccttttgcg gcgtaacctg aaccacgcgt ccggcaacat
     4861 aagcgtcttc cgtttcctct tcgtgctgcc accataaaaa aaacgccgac ccggcggctg
     4921 cggcggcaag cgcgaacagc agcgtcaatg ccgtcaggcg gcgtttgcgt ttgacttttg
     4981 cgctattggc ttcttgtctg ttttgaattg tcgtttcatc tgcatgtgtt gccattattc
     5041 caattccaaa tacttctaat act
//
LOCUS       DAXHRP010000149         4994 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.149, whole genome shotgun sequence.
ACCESSION   DAXHRP010000149 DAXHRP010000000
VERSION     DAXHRP010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4994
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.149"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..1993
                     /locus_tag="ACFM72_001790"
                     /pseudo
     CDS             1..1993
                     /locus_tag="ACFM72_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951079.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            2006..4945
                     /locus_tag="ACFM72_001791"
     CDS             2006..4945
                     /locus_tag="ACFM72_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HFC6258323.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFM
                     IVDEPHKFPTRDSAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSDGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFLDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFADLFTAYLHENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYREFLEKLAQTAKIRMQTLHQAFYCIRNELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTNKDGKPRAVKKADLGRFEDTEHRPAAGYLFGEIF
                     YDSDIEHENVANNQIEGVIVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGR"
BASE COUNT         1513 a         1168 c         1200 g         1113 t
ORIGIN      
        1 ccctgatcta agcgacacag ccggggcgaa cactgaggca atctacactt cagacggcat
       61 taccgccaac tctacccaac tcgaacagct caaaaaactg tttcccgcct gttttgacgc
      121 agacggaaat ttccttatcg acagattaca agccgaaatc gcgccgcaga ccgacatcgg
      181 acgcgaattt tacgaaatga actggctggg caaatcatat gctcgcctgc ttcgcaacct
      241 gccgcccgaa accctgataa gtgaagacaa gacgcacaac gccaagcccg aaaatgcagg
      301 cagccaaaac ctgctgattc gtggcgacaa tctagaagtg ttgaaacact taaaaaacgc
      361 ctacacaaac agcgtgaaga tgatttacat cgacccgccc taaaacaccg gatcagacgg
      421 ctttgtctat caggacgacc gcaaattcac acccgctgaa cttgcccgcc tagccaatat
      481 tgatgaagac gaagctgcgc ggattttaga tttcaccgac aaaggctcaa actcgcacag
      541 cgcatggctc acctttatgt atccgcgcct gtatgtcgcc cgcgaactgt taaaggacga
      601 cggtgtgatt tttatctcga ttgacgataa cgaagcggcg cagttgaaat tgttgtgtga
      661 tgaagtgttt ggggaaggga attttgttgc acaattgcct tggcgaaaaa gaacagctaa
      721 atcagatgtg ccttttggta tttcgcagga ttatgaatgg atatttgtat tcgcaaaatc
      781 ttgccaattt attgcagcaa ctaaaggcaa ggaacgacgc tattatgaga ctgatgattt
      841 ccccgatcgt ccttggcgta cccacgactt aacgaaacaa acaactgcgg cggaaaggcc
      901 aaatagtttt ttcacaatgg ttgatcccaa gacaggaaaa aaatatccag caaatccaaa
      961 tgcaacttgg cgtgtaacca aagatacatt tcaagattat tataataaag gaaaaatcgt
     1021 tttccctgat gattatgatt tcttaaatat cagcaatcca gttatgcgtt actttaaaga
     1081 tgacgacatg aaaaaagctg gcgaggattt tggcaaagta gctgtaagca gtagattacc
     1141 tgaaaatgtt ggtacattag ccgatgcagt agccgaatat ttggctattt ttagtaggac
     1201 gctacctgaa aatatcggaa tgactaaaga aggcacaaaa gaaatcacag atttatttgg
     1261 tagcaaaata tttaccttcc ccaagcctag tcaattgatt aaatttttag tttcaataag
     1321 ttcaaagagt aatgacctaa tcctagactt cttcgcaggc agcggcacaa ccgcccacgc
     1381 cgtgatgcag cttaacgccg aaggacaaaa cggtaaccgc cgctatatct gtgtacagct
     1441 tcccgaaaaa accgctgaaa aatccgaagc ccgtaaagca ggctacccga ccatcttcga
     1501 catcaccaaa gcccgcatag aaaaagccgc cgccaaaatc cgcgtcgaac atcccgatta
     1561 cacgggcgat tcgggcttca aaatctttca aacggcagac aatttcaggc agcatccgga
     1621 caaggatttt tcgcccgaac aaccggattt gccgcttaac gatgaattaa gcgaagaaca
     1681 gctgcaaacg cttctgacca cctggacgct gtatgacggg gcggcactga ccacgccggt
     1741 tgagcctgtg cggttagggg cttacacggc gtatctgtgc gaaaaacggc tgtatctgat
     1801 gaatgccggt tttacttccg ccgatttgtt ggcgtttatc cgcaagctgg acgacgatgc
     1861 ggatttcaat cccaaccgcg tgattgtatt cggcagcaat atggcaagcg ccatgcagca
     1921 cgaacttgac caggcggttc gcggttatgc caataaaaaa gagattgagt tgaatgtggt
     1981 tatcagggtt tgacggaggc aattcatgag cggttttaat tacgagaaaa accagccgca
     2041 ccaaatgcgg gcggtttcgg cggttttggg cgtgtttgac ggggcaacgc ccaaatatcg
     2101 gacggcagac gaaaatcccg aacttttgtt tgctgcaaaa caatacgcaa acaatatcct
     2161 gaaagtgcaa agccaaaacg gtatagacgg ccgattcccc gaccgttcgg acgaccaaaa
     2221 tatccttgat atttccatgg aaacgggcac gggcaaaacc tatacctaca cacaaaccat
     2281 gttcgagctg caccgttggc tgggcgtgtt caaatttatc gtggtcgtgc cgactttgtc
     2341 cattaaggcg ggaacacagc agtttttgca aagcaaggct ttggcagagc attttgaaca
     2401 ggatttcggc ggcgattatg aaggcgtacg cctgaaaacc tatgtggtgg aaagcgcgaa
     2461 aaagaataag ggcaaaaagt ccaatgcgcc cataacgatt gagcaatttg tcaaagcgga
     2521 aaacaaaaag gaaattcatg tgctgctgat taacgcgggc atggttaatt cgtcgtccat
     2581 gaacgatacg ggcgacaagg cattgaagga tttgtttgac aatcccgttg atgcattggc
     2641 tgccgtgcgc ccgtttatga ttgtggacga accgcataaa ttcccgaccc gagatagcgc
     2701 gaaaacgtgg ggcaatatca aacgcttaaa accgcaatat attttgcgct acggtgcaac
     2761 atttaacgat gaatattaca acttgcttta ccgtttgacg gcagtagacg cgtttaacga
     2821 cgggctggtc aaaggcgtgc gcgtgtttca ggaagaaatg cagggcggca tggatgcggc
     2881 ggtaaaactg gtgtcgtcgg acggcaaaga agcgaaattt gaattaaacg aaaaggacaa
     2941 aaagcagacg ttcaaactgg caaaaggcga agatttggcg caaatccatc cggctatttc
     3001 ggatttgaaa atcgacaaaa tgaataaaac cgtggtggtg ttaagcaacg gcttggagtt
     3061 gaaaacgggt gccgtcatca acccttattc ctattcgcaa acggtgcagg atgcgatgat
     3121 gcagcgggcg gttgccgaac atttcaagct ggaacgcgcg cttttggcag aacgcgcgcc
     3181 acagcccaaa atcaagccgc tgacgctgtt ttttattgac gatatcgcgg gctaccgcag
     3241 cggcaacgag ctttcaggca gcctgaaaga taaatttgaa agctggattc gcgcggaagc
     3301 ggcacgccgt ctgaaaacgg aaagcgaccc gttttaccgc gattacctgc aaaagacgtt
     3361 ggacgatgta tccgcctgcc acggcggcta tttttccaaa gacaatacag acagcgacga
     3421 tagaatcgag caggaaatca atgaaatcct gcacgataag gaaaaactgc tgtctttgga
     3481 caacccgcgc cgctttattt tttccaaatg gacgctgcgc gaaggctggg acaatcccaa
     3541 cgttttccag atttgcaaac tgcgttccag cggcagcacg acttccaagc tgcaagaagt
     3601 cggacgcggc ctgcgcctgc cggtaaacga gctgatggcg cgggtgcgcg atgtaccgta
     3661 caaactgaat tattttgtcg atagcagcga aaaagacttt gtgaagcagc ttgtcggcga
     3721 aatcaacgac aattcttttc aggaagaaat ctccaaaaag tttaccgaag agctgaaaca
     3781 aaaaatattg caaaaatacc ccgatatcaa accgctggta ttggtaaacc aactgttttt
     3841 agatggcatc attgacgaca atgaaaactt tgccgaagac ggctatgaca aattaaaagc
     3901 cgcctatccc gaagccttcc ccaaaggttt ggacaaaggc aaagtcagca acgccaaaga
     3961 cgaaggcaaa gacaccatca tcatgcgcga aggcaaatat gaagaactca aagccttgtg
     4021 ggagctgatt caccataaag ccgttttgca gtataaaatc aaggatgaag ccgaatttgc
     4081 cgatttattt accgcctatt tgcatgaaaa cgctgccaaa ttcccacagg caggcatacg
     4141 cacggcggta aacgaagctt atatcaacaa cgggcttatg ctttcccgcc gcatagacag
     4201 ttttgaagat gaagatttta tccgtttcaa cacaatgact taccgagagt ttctggaaaa
     4261 actggcacaa acggcaaaaa tccgtatgca gactttgcat caggcgtttt actgcatccg
     4321 caacgaactg aacattggcg attttttgaa tatgcaaacc atcgcccaaa tcaaaaacgg
     4381 cttcaaccgg tttttgcttc atcattcctt ccataaattc gaactggatt accggcttgt
     4441 cggcagcaaa atccatccga ccaaatttac caataaagac ggcaaaccgc gcgcggtgaa
     4501 aaaagcagat ttgggcagat ttgaagatac ggagcaccgg cctgccgccg gctatctctt
     4561 cggcgagatt ttctacgatt cggatataga acatgaaaat gtcgccaaca accaaattga
     4621 aggcgtaatc gtatttacca aaataccgag aaactccatc aaaatccctg ttgccggcgg
     4681 cggcacgtat tcgcccgatt ttgcctatat cgtgaaaacc aaaagcggcg agatcctgaa
     4741 ctttgtgatt gaagccaaag ggactgacgg ggcggaagat ttgcgaaaaa gcgaagagcg
     4801 gaaaatcaaa catgccgaaa agctgtttgc cgagatttcc aaagaaatca aggtggtgtt
     4861 caaaacgcag tttgacggcg agaggatagc cgaactgatc gggcaaaata tgcccgcagg
     4921 cgggcattct gaaaacgggc gttaaagaac gaatgttcgg ggcgcgtgcc gtctgcttcg
     4981 ggattttaaa atgc
//
LOCUS       DAXHRP010000150         4967 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.150, whole genome shotgun sequence.
ACCESSION   DAXHRP010000150 DAXHRP010000000
VERSION     DAXHRP010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.150"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(200..2476)
                     /gene="znuD"
                     /locus_tag="ACFM72_001792"
                     /gene_synonym="tdfJ"
     CDS             complement(200..2476)
                     /gene="znuD"
                     /locus_tag="ACFM72_001792"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HFC6258324.1"
                     /translation="MAQTTLKPIVLSILLISTPILAQAHETEQSVDLDEVTVVGKSRP
                     RATSGLLHTSTASDKILSGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDDAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSAISEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIQYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            2896..3486
                     /locus_tag="ACFM72_001793"
     CDS             2896..3486
                     /locus_tag="ACFM72_001793"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HFC6258325.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRNTMPECLEVTAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            3550..4608
                     /gene="trpD"
                     /locus_tag="ACFM72_001794"
     CDS             3550..4608
                     /gene="trpD"
                     /locus_tag="ACFM72_001794"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HFC6258326.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSISQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(4665..4967)
                     /locus_tag="ACFM72_001795"
                     /pseudo
     CDS             complement(4665..4967)
                     /locus_tag="ACFM72_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684347.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1140 a         1142 c         1404 g         1281 t
ORIGIN      
        1 gatcttgggt ttctgctttt gatttttctg cttttgcgag aatgacggcg tgaaagtaag
       61 aatgatgaaa caaaaaaaat gggaatgatg gcatagtggt ttgttctttg tctttgccat
      121 atttcctaac aaattgatta aaaagaaaaa aggttttcag aatgccgtct gaaaaccttt
      181 tttgtttgcc tgtccgattt taaaacttca cgttcacgcc gccggtaaag ctgcggccca
      241 tttgcggcgt atcagagaga aagctgctgt gggcgtaaac ggattggttg agcaggttgt
      301 cggctttgac gtaccaattc cactcgccat agcgcgtatt gcggcggtag tttgcgccga
      361 ggttgagcat atggtgtccg ggcgtgcgcg tttcgtagcg ggcgagtttg ttttgggcga
      421 acacgcggta gtagtccaaa ttggcatcga tacggtcggt cagcgaggct ttcaggtgga
      481 agccgaggcg cgcagccgga acacgggggg cattttggtc gtcctgtgcg atgaaaggac
      541 ggttgccgta ggcatcttct ctgccgggta gggaaggcag gtttttcaga cggcctcgta
      601 catagtcgcc ggaaacgccg atgcggtagc gcggtgtcgg tttgaagtag atttcgcctt
      661 ccgcgccgta gaagtcggcg ccggattggt tgtagcgcac gagcttcatt tcgctgtcgt
      721 cttcgatgga tttggggccg cgtccgtcgt ttaaggtttg ggcgtaaatg tagttaccga
      781 agcggttgcg gtagagtgcc agattgtatt gccagcggtc gccttcgtag cccagcgcga
      841 gttcgatatt gttggaacgc tctttgttga ggtgtttgtt gccgacttca aaggtgttgg
      901 tggcgacgtg tttgccgtgt gcgtacagct cttgcgttga cggcaggcgt tcctgatggg
      961 aggcggtcag gctgagtttg tgttgtggcg tgaaatacca gttgcccgaa agtgcgaatg
     1021 agcgggcggt ttggcggtgc gcgccgaggt cgggcagggg gtggttgtag tagttttccc
     1081 gatcaatcaa tgctttgtcg tactgaatgg aggctttttg tttttccacg cgtacgccgc
     1141 cttcaagcgt gaagttgtcc cagtttgcct gttctacacc gaaaaagctg taatgttgca
     1201 ctttgttgtc aagcagcatc ggttgtttaa ccgcttcgga tatggcagat aaagcactgg
     1261 atttttgttg taaatattgc acgccccagc tgcctttcag acgacctatg ggttggtggc
     1321 gcaactcgat gcgggcgttt tgcgtttggt tgttaaaaaa gttttcgact gcatcgcctg
     1381 ctttttcgtc gtggcggtag tcgttgcggt tcaggtgtac gcgcagggct tcaaaaccgg
     1441 ggaacggttg cttccattcg gcacggagtt cgtagcgttt gttgcgcagg tctatccacg
     1501 gtctgccgct gtgggtgtgt gcgtgtgcat catcgtcgtc gtggaagccg cagctcaagc
     1561 ccggattgtc gtaatcgatg tcttcttcgg tcaacaggtg cggataaagc tgtaaatagc
     1621 gtttgttaat caagctcttt tgccagatga tgtcggcgtg gcaatcatcg tattcgtggc
     1681 tgtgggcagg cagaccatat tggtcgcgac ggtcgctgta cgctacgccg ataaaacctt
     1741 tttcgccaac ccaagacagc ccgatgctgc ccgtttgcga atcggcgtgg ctgtcgggca
     1801 ggcgtttcag attgcggtaa cgcggtacgg cgtaatcccc cgatttgcgg tacagccctt
     1861 ccgtgtgcaa tacaaagttt ttgcccaaac cgatattgat gccgccggac gtgagttttt
     1921 ccagattgcc gctgctcaaa cgcaatccga gttcgcccga tacgccgttt tcaggcattt
     1981 tttcggggat tttgccatcg gcaacatcga ccagccccgc cacattgccc gagctgtaca
     2041 agagcgtaac cggcccgcgc aggatttcga cctgttgcga caaggcggta tctaccataa
     2101 tggcgtgatc gggcgaaaaa tccgccatat cgcccgtttc gccgtgatgg ttcaacactt
     2161 taatccgcct gcctgtttga ccgcgaataa cgggagcgga cgcgccgccg ccgtattgcg
     2221 aggcgtgaat gcccggcacg ccgtccaaag catcgcccaa gttgacggct ttttggcgca
     2281 aggtatcgcc ggagaggatt ttgtcggaag cggtcgaagt gtgcaacagc ccggatgtgg
     2341 cgcgcggacg gcttttgccg acgacggtaa cctcgtccaa gtcaacagac tgctcggttt
     2401 catgcgcttg ggcgaggatg ggggtgctga ttaaaagaat tgataaaaca atgggtttga
     2461 gtgtagtttg tgccattttg gcttctcgtc gcatttcaaa agtttgttat tatataacat
     2521 tacatttttt atatcataag attttgagaa cactcagagg gcataggcaa aagtttttca
     2581 aatgaaacgg ttgcggcatc gggcggtgtc catttgtatc cgccgtcatt cgggggcgcg
     2641 gttgatgttg acgcagattc cgctgtgttt gcccactatg ttcggctgcg ggataaccaa
     2701 aatttatgag tgcataaaaa cggcacgttc ccgaacggtc gaaaaggtgg caaaatggcg
     2761 tacttgtcag aacgcgaggc tctgcccagg ttcacgaggg cgcatcgggc acgctaagat
     2821 ataaggggta tggatggtgg tatcggaaat gcagttaata acaaacaaat tataaatcaa
     2881 taggttaatc acaaaatgct tttgtttatc gacaattacg acagttttac ttacaacatc
     2941 gtccagtatt tcgctgaatt ggggcaggaa gtcgccgtgc gccgcaacga tgatattacg
     3001 ttggaagaaa tcgaggcatt gaatccgcaa tatctcgtta tcggacccgg cccgtgttcg
     3061 cccaaagaag cggggatttc cgtggcggcg atgcgccatt ttgccggccg gctgccgatt
     3121 atgggcgtgt gcctcgggca tcagacgata ggcgaggcgt tcggcggcag gatagtccgc
     3181 gccaaaacgc tgatgcacgg taaggtgtcg cccgtgtccc attcgggcaa gggtatgttt
     3241 aagggtttgc ccaatccggt tacctgtacg cgttatcaca gcctcgttat cgatcggaat
     3301 acgatgcccg aatgtttgga agtaacggct tggactgagg acggcgagat tatgggtgtg
     3361 cgccataagg aatatgccgt cgagggcgtg cagttccacc ccgaagccct cttgaccgag
     3421 cacggacatg atatgttaaa caatttttta atcgaatttc aaaacttcaa accgcaaaaa
     3481 atctgacgtg atgccgtctg aagcccttca gacggcattt tcgtccgaat attgaacgga
     3541 ggacaaaaaa tgattacacc gcaacaggct atcgaacgat taatcagcaa taatgagttg
     3601 ttttacgatg aaatgaccga cttgatgcgc caaatgatga gcggaaaagt gccgcccgaa
     3661 caaattgcgg cgattttgac aggattgcgt atcaaggttg aaaccgtttc cgaaattacc
     3721 gcagctgcag ccgtcatgcg cgagtttgcg acaaaagtgc cgctggagaa tgcggagggg
     3781 ctggttgata tcgtcggtac gggcggggat ggtgccaaaa ccttcaatat ttcgacgact
     3841 tcgatgtttg ttgccgcagc ggcaggcgcg aaggttgcca aacacggcgg gcgttccgtt
     3901 tcatcttcca gcggcgcggc ggacgtgatg gagcagatgg gcgcaaacct caacctgact
     3961 cccgaacaga ttgcccaaag tatcagccag accggtatag ggtttatgtt cgcccccaat
     4021 caccacagtg ccatgcgcca tgtcgccccg gtacgccgtt cgctcggttt ccgaagcatt
     4081 ttcaacatat tgggtccgtt gaccaatcct gcgggcgcgc cgaaccagct tttgggcgtg
     4141 ttccacaccg atttgtgcgg cattttgtcg cgggtcttgc aacaactcgg ttcaaaacac
     4201 gttttagtcg tttgcgggga gggcggtttg gatgaaatta cactgacggg caaaacgcgc
     4261 gttgccgaac tcaaagacgg aaaaatcagc gaatacgaca tccgcccaga agatttcggt
     4321 atcgaaaccc gccgcaattt ggatgaaatc aaagttgcca atactcagga atctttgttg
     4381 aaaatgaatg aggtgctgga tgggaaagaa ggggctgcgc gcgatatcgt attgcttaat
     4441 accgccgccg ccctatatgc cggaaatgtc gctgcttcgc tttcagacgg catatctgcc
     4501 gcacgggaag ccatcgattc aggcagggcc aaatcgaaaa aagaggagtt tgtcggtttt
     4561 caaccacaac aaagatgcca ttttcttgga aagatggagc ttgggtgatg ccgccatgat
     4621 tatggaactt ttgtggcaaa acataagcac ttcacgaaga gaacttacca aactgttttt
     4681 atataaaaac ttggggctgt actagataac cagaccaaat tcccattaac taattgtctt
     4741 aaaatctgaa tttgagattc tatttaaaat gccattggca tttctttaaa tgcagcccca
     4801 aatgctcttt gggaatgccg ttaaacttac gtaaatggct aaattcacta atatcaagca
     4861 catcataact acgaaaggta tccgtgtata caatgccatc aggcttaact ttctttcgga
     4921 taattggcaa caatgtcgct gattgcgcat taggaacaac gacggta
//
LOCUS       DAXHRP010000151         4947 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.151, whole genome shotgun sequence.
ACCESSION   DAXHRP010000151 DAXHRP010000000
VERSION     DAXHRP010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.151"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(268..717)
                     /locus_tag="ACFM72_001796"
     CDS             complement(268..717)
                     /locus_tag="ACFM72_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258327.1"
                     /translation="MNNFNEYSLCQEKNLFFKLPDSDFLELEKHIQIPYDLFCFWKEI
                     GYGFLTVNESGSIRSESDNRIMDSLSILDILIGESEQVSSNFIIEPYQVPFFERFSEY
                     FICFDRRNLDKPKQPVYWIWDMENPLADSIKSFIYKLFENPNFLNEI"
     gene            complement(714..854)
                     /locus_tag="ACFM72_001797"
     CDS             complement(714..854)
                     /locus_tag="ACFM72_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258328.1"
                     /translation="MMPTIFNHLENNGGNIWQNITPARYPEQHQGGIHQADGSLKILL
                     LL"
     gene            complement(939..1460)
                     /locus_tag="ACFM72_001798"
     CDS             complement(939..1460)
                     /locus_tag="ACFM72_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 42 family protein"
                     /protein_id="HFC6258329.1"
                     /translation="MIFGNPYKFAIWIEEIDEWSSENFSEGIFTFFVNGDMIPQELPN
                     TSTFLPNSLRSIQQFISIIDDLECPNLFDLDYCNAYIFLNDAVHYRNMKLSEEESYSY
                     WKYCITEYIDNHEEKDNIWYLSNKHNEKLLYLNNNIIKESVFKKGYIKNIMEKIIMKY
                     NYILNGNDKIYLT"
     gene            complement(1890..2198)
                     /locus_tag="ACFM72_001799"
     CDS             complement(1890..2198)
                     /locus_tag="ACFM72_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258330.1"
                     /translation="MDVFPELNIHCFYDDKNQLEAIEIFEPNKFFLEDISFNWLGKIN
                     DEIISYLYKSGINDFEIDDLGIRLLNIPVSTIINSIGKVECCYLDFSNRDTKFYVKQV
                     "
     gene            complement(2648..2971)
                     /locus_tag="ACFM72_001800"
     CDS             complement(2648..2971)
                     /locus_tag="ACFM72_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6572 domain-containing protein"
                     /protein_id="HFC6258331.1"
                     /translation="MSILEENVIDSASIENGILILTISDHLKWDNEHLFLLQEKINSY
                     IQYIESGQIFEDFGESSYETIEIQLIYKYKPNENYRKFLYRLEGALLKLKLRFSHGTI
                     SYFYS"
     gene            complement(3125..3204)
                     /locus_tag="ACFM72_001801"
                     /pseudo
     CDS             complement(3125..3204)
                     /locus_tag="ACFM72_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(3266..3727)
                     /locus_tag="ACFM72_001802"
     CDS             complement(3266..3727)
                     /locus_tag="ACFM72_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258332.1"
                     /translation="MNIIMDSTRKFGILWEKNSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNTVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELYNIFSIDTAYMSG
                     GSNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            complement(3736..>4947)
                     /locus_tag="ACFM72_001803"
     CDS             complement(3736..>4947)
                     /locus_tag="ACFM72_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFC6258333.1"
                     /translation="SLGGILAGSGTSLAAPYLDKAAENLGTAGKAAVNALGGAAIGYA
                     AGGNVGTAAVGANVDWNNRQLHPKEMALADKYAEALKREVEKREGRKISSQEAAMRIR
                     RQILRWVDKGSQDGYTDQSVISLIGMKGEDKALGYTWDYRDYGARNPQTYNDPKLFEE
                     YRRQDKPEYRNLTWLHSGTKDTKIRQGERKNEEFALNVAEGLTSLVNPNPRIKVPILA
                     GIRNLKNIKPTVTGSDPLLAGAGNIRIPATSNVAKVDRIPDTALASKSHQKNDFGTSK
                     GQGAESSIPVPQAISIKIKNPDKTVSETTYQSNPKHTPGQLGFKFDAGIEPKNSVQLI
                     ESSVQIGKQRFAIDDKGHIHRYMGGDRKNEPWHWAGSTSDKKNPLSLTSQQKAGIKRA
                     YPEQSKNKLLK"
BASE COUNT         1451 a          974 c          766 g         1756 t
ORIGIN      
        1 gttgtgccgg ccgtactgcc gacatggatg tggcgatgtg ctgcttttgt ctgattgccg
       61 tggtggcttg ttgaaagaaa ggtcgtctga aaccgtattt gttgtttcag acgacctttg
      121 ggctcaaacc ttgagaaccg catgcgtgcg ttccgcacac atcctacttg ttgagtttag
      181 gtttcatatg ggctacggct tgctgatttc agacgacctt tttaatttag ttgggtttta
      241 aacccaatct acgcttacta caacttacta aatttcattc aaaaaattag gattttcaaa
      301 taacttataa ataaaactct ttattgaatc agctaacgga ttttccatat cccatatcca
      361 ataaacaggt tgtttaggct tatctaaatt tcgcctatca aaacaaataa aatattcact
      421 aaatctttcg aaaaatggta cttgatatgg ctcaataata aaattagaag aaacttgttc
      481 tgactcccca attaatatat ctaaaatgga taaagaatcc ataattcgat tatcggactc
      541 tgagcgaata cttccgcttt catttacagt aagaaaacca taaccaattt ctttccaaaa
      601 gcagaataaa tcatatggaa tttggatatg cttttctaac tctagaaaat cactatctgg
      661 taatttaaaa aatagatttt tctcttggca taatgaatac tcattgaaat tattcacaat
      721 aatagaagaa tttttaatga tccatctgcc tgatgaatgc cgccttgatg ctgttcagga
      781 tacctggctg gagtaatgtt ttgccaaata ttaccaccat tattttctaa atggttgaat
      841 atggtgggca tcatacttac ttcctgttgg ctttataagc ctaccagttc tggaagatat
      901 taaaaaacac gtgcttgatg catacttaaa catagatttt atgtgagata aattttatca
      961 ttaccattta aaatataatt atatttcata attatttttt ccataatatt ttttatatat
     1021 ccttttttaa acacggattc cttaataata ttattattta aatatagcaa tttttcatta
     1081 tgcttattgg ataaatacca aatattgtct ttttcttcat ggttgtcaat atattctgtt
     1141 atacagtatt tccaatatga ataagattct tcttctgata atttcatatt acgataatga
     1201 acggcatcgt tcaaaaaaat atatgcatta caatagtcta agtcaaataa attaggacac
     1261 tctagatcat caattattga aataaactgt tgtatgctac gcaaagaatt tggtaaaaaa
     1321 gtagatgtat ttggtagttc ttgaggaatc atgtctccat tcacaaaaaa tgtaaaaatc
     1381 ccttcggaaa aattttctga actccattcg tctatctcct caatccaaat tgcaaattta
     1441 tatggattcc caaaaatcat ttagaatact ccttgaataa aatttatttt ccaggaatac
     1501 ccaatttcct acgcaattgg atattaagtt tatctattct attcctgttt aaaattcctg
     1561 cccagtgata caaattcctg ttattgccag tacctgaaaa aaattgatgc acttcaccag
     1621 ttgatttatc aaaagtaacc ctcataccgt ctttaacgga aattgactgt tgaaataatt
     1681 ctaaagaatt tttaggttct aatgatgctt catgtccagg tcttttccca ccgtgtccta
     1741 atgagtgttt ttcattagat tgatatttta attcatagct atctttaccc tttctaaaag
     1801 ttactgtggt ttcagatgga acaggtacag atgatcctgt gcttgattct ttatctggcc
     1861 ttaaatcatt tcccgaatga ttcttcgttc tacacttgtt ttacataaaa ttttgtgtct
     1921 ctatttgaaa aatctaaata acaacattct actttaccta ttgaattgat tatagttgaa
     1981 acaggaatat taagaagcct aatacccaaa tcatcaattt caaaatcatt aattccactc
     2041 ttataaagat agcttattat ttcatcatta atttttccaa gccaattaaa agaaatatct
     2101 tctaaaaaaa acttatttgg ttcaaatatc tctatcgctt caagctgatt tttatcatca
     2161 taaaaacaat ggatattcaa ttcgggaaaa acatccatag gaacccgaga gtatgatgac
     2221 ttataaattt cttgtacatc agaactaaat attgcacgaa cttgttttcg attcagattt
     2281 gatgagataa tatttctttc tatttttttt gaactaaaat aaaaaattgc cataattttt
     2341 ttgcctaaac aatattacca ttttcgtaag atgcatagaa caaaccatgt cttatccatt
     2401 ttgttccatc ggcagacaga taacgactat atctaaattt tatttttcac tctcataaaa
     2461 aatttctgca atattcaata tatttacttt cttaaccata gcgtaaattc ctcaggctta
     2521 tatatttcag tataagtatg acttaaagga tatgacgccg cgtgttacga tttgcttctt
     2581 ttgatttcag ggtttatata aattatggct tgcttgggct cgaagtgata aagagagtat
     2641 ttacttttca actataaaaa tatgagatag ttccatggga aaaccgtaat ttaagtttta
     2701 ataaagcacc ttctaggcga tataaaaatt ttctataatt ttcatttggt ttatatttat
     2761 atataagctg tatttcaata gtctcatagc tactttctcc aaaatcttca aaaatttgac
     2821 ctgattcaat atattgaata tatgaattta ttttttcttg caacaaaaac aaatgctcgt
     2881 tatcccattt taaatgatca gaaatagtta atatgagtat tccgttttca atagaggctg
     2941 aatcaattac attctcttcc aaaatagaca ttatcttttc ctttcaatga taactttagt
     3001 aggttcaatt ttggtcccct ttggatagcc cggtttccct tgccaaccac tattgctccc
     3061 gttctttcaa tttcaggaaa agcttttttc tgatttttgg taagtggcgc agttattgaa
     3121 gccttatatc ggcggcagaa cgggcggtaa cttccagcac aaaaaacgga gtagttcttt
     3181 ctgtgttttt tctttaattt tcaatgtatt atcttaatat ttcgagggta acatatctgc
     3241 taatctagta cagtctcaaa atatattata gattcagttg aaaaataaca gattcaactg
     3301 tacctttctt atacctgatt tctttaaagt ttttcccatt gtcaaaacta taaaaaagtc
     3361 tctcttcctc accagaatat cccatttcta atactaaaca atctatttca caattactcc
     3421 ctccgctcat atatgcagta tcaatagaaa atatattgta taattccaga gaattatatt
     3481 tatctatatc aaatagttgc tctccaaaat ccaaaccatt gtttccacct gcataatact
     3541 tctcctcaaa ggatgatttc aaactattaa aaactgtatt tagtgtaaaa tacccatatg
     3601 gacatatctt aggatatata ttctctccta ttattatctg aatttttcca taaataaaac
     3661 cattacattc agagtttttt tcccataaaa tcccaaattt tcttgttgag tccataataa
     3721 tattcatata aatccttatt ttaataactt gttctttgat tgctcggggt atgctctttt
     3781 aattcctgct ttttgttgac ttgttaagga caagggattc ttcttatcgg atgtagaacc
     3841 agcccaatgc caaggttcat ttttcctatc gccccccata taacgatgaa tatgtccctt
     3901 atcatcaatt gcaaatcgct gtttaccaat ttgtaccgaa ctttcaatta attgaactga
     3961 attctttggc tcaataccag catcaaactt aaaccctaac tgaccaggag tatgtttagg
     4021 gttagattga taagtagttt cactaaccgt tttatctgga tttttaattt ttattgagat
     4081 agcttgagga acaggtatag aagactctgc tccctgtcct ttagacgtac caaaatcatt
     4141 cttttgatga ctcttcgacg ccaatgccgt atccggaatc ctgtccacct tcgcaacatt
     4201 gctggttgca gggatacgga tattccccgc acccgccaat aagggatcgc tgccggtaac
     4261 tgtcggcttg atgtttttca ggttgcggat gcctgcaaga atcgggactt ttatcctcgg
     4321 attggggttg acaaggctcg tcagtccttc ggcaacgttc agtgcaaact cttcgttttt
     4381 ccgctctccc tgcctgattt tggtgtcttt cgtcccgctg tgcagccagg tcaggttgcg
     4441 gtattcgggt ttgtcctgtc ggcggtattc ctcaaacagc ttcggatcgt tgtaggtttg
     4501 cggatttctt gcgccgtagt cgcggtagtc ccaagtataa cccaaggctt tgtcttcgcc
     4561 tttcattccg ataagggata tgacgctttg gtcggtatag ccgtcttggg aacctttgtc
     4621 cacccaacgc agtatctgcc tgcggattct cattgccgct tcttggctgc tgatttttct
     4681 gccttcgcgt ttttcaactt cgcgcttgag ggcttcggca tatttgtcgg ccaacgccat
     4741 ttctttcgga tgcagctgcc tattgttcca atcgacattc gcccctactg ccgccgtgcc
     4801 gacattcccg cccgccgcat agccgattgc cgccccgccc agtgcgttga ccgccgcttt
     4861 gcccgccgta ccgaggtttt ccgccgcttt gtccaaatac ggtgcagcaa gggaagtgcc
     4921 gctgccggcc agtatgccgc cgaggct
//
LOCUS       DAXHRP010000152         4879 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.152, whole genome shotgun sequence.
ACCESSION   DAXHRP010000152 DAXHRP010000000
VERSION     DAXHRP010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4879
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.152"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(72..554)
                     /locus_tag="ACFM72_001804"
     CDS             complement(72..554)
                     /locus_tag="ACFM72_001804"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC6258334.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(707..868)
                     /locus_tag="ACFM72_001805"
     CDS             complement(707..868)
                     /locus_tag="ACFM72_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258335.1"
                     /translation="MSGQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            complement(942..1403)
                     /gene="recX"
                     /locus_tag="ACFM72_001806"
     CDS             complement(942..1403)
                     /gene="recX"
                     /locus_tag="ACFM72_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HFC6258336.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1476..2186)
                     /locus_tag="ACFM72_001807"
     CDS             complement(1476..2186)
                     /locus_tag="ACFM72_001807"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HFC6258337.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLSNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETA
                     TGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            2593..3858
                     /locus_tag="ACFM72_001808"
     CDS             2593..3858
                     /locus_tag="ACFM72_001808"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HFC6258338.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDQLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     AGYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            complement(3916..4722)
                     /locus_tag="ACFM72_001809"
     CDS             complement(3916..4722)
                     /locus_tag="ACFM72_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HFC6258339.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
BASE COUNT         1053 a         1114 c         1439 g         1273 t
ORIGIN      
        1 cttgatttca tccgtttgca atggaaacgg atggcgcgat gtgcctgtct ttcagacggc
       61 atagtccgcc gtcagcagcc gcaggacatg tcttcagagg cttgcaggct gatgtctctg
      121 cgttttttgg ctttttcgta gcggcagcgt tggcggtcgg tcaggatttc cagcggaggg
      181 acagggacgg gtttgccgtc tttgaccgca accatcgtga agtagcagct gttggtgtgg
      241 cggatttcgc cggtgcggat gttttgtgct tcgacacgga tgccgatttc catcgaggtg
      301 cgtcccgtgt agttgacagc ggcgtaaaag gtaaccaaat cgccgatgtg gatgggttct
      361 ttaaacagga ctttgtcaac cgacagggta acgcaataat tgccgctgta acggctggcg
      421 caggaatagg caacctggtc gagcaggagc aggagttcgc cgccgtgtac gttgccgctg
      481 aaattggcgg tgtccggcat catcagttcg gacataatga gttcgtgcga aggcagttgg
      541 cgttgttgtg tcatggtgta cctgttttaa gaaagggtgt tttgaaatgg gtgcggggaa
      601 attttaggga atggggaagt ggaattcaag ctaaaaaaag ctatgatggg atagtctgcc
      661 gaaatggacc gccgatgccg tctgaagcct tcagacggca ttttgtttag gaaagccaaa
      721 aacggaagac caggaaaaac acgagtgcca atacggcgac ccaaacgacg agcatgaatc
      781 cggcaactgc ccgtcccata cggtaaaccg ggtttttgcg ttcgtcttcg atgggggagg
      841 tgtggtgttt ttcgggttgt ccggacattt tgttctcaat cggaaaagtt ggaaacgggc
      901 gtaaggttat gttgccgtgc aaaaagattc aagaaggaag gtcagcagcc gtcttcccaa
      961 ttttcgtccc aagcgtgttt caatgccgtc tgaacggtat cggcatcgaa tccgcgatag
     1021 gcgaggaaac gcgcctgttt ttgtttttct ttgaggtcgg cggcggggtg tttgaatttt
     1081 ttacgcaaca cggctatggc ggcctgtttt tcgcttgagc ggtcgggaag caggttgcgg
     1141 ctggtttctt catctatgcc ctgttgcgcc aaagcctgtt tcagcctcaa tgaaccgtgt
     1201 ttgcggcttt tgctgcggat ataggcttcg gcatagcgca aatccgactg ccagttgcgt
     1261 tcggcaaatt cgtttaacac gttttccaac tcctcttcgc tttcggcgtg cggtgcaagt
     1321 ttgcgtttca gaccgatgcg gctgacttct tggcgcgaga ggatgtccat cgcgcgggcg
     1381 cgtagggatt tttgcggttt catggcggcg gtttcggcac ggaaagattc agacggcatg
     1441 ggaaacggat tccgatgccg tctgaacaga ttgttttatt cttcgtcttt atttttctgc
     1501 ggttgcaggt tttcgtaaat ttcgggcagc gagccgataa tccagtcggg gcgggtcgca
     1561 tcgtcttgcg agagcagcgt catatcgccg taaccgaagg taacgccgac gctcaggcag
     1621 ccggcggctt tggcggcgat gatgtcgttg cgcgagtcgc cgaccataac catgtttgca
     1681 acatcgatac ccaaaacttc ggcggcgtgc cgcagcggca gggggctggg ttttttctcg
     1741 ggcaggctgt cgccgccgag tatcaggctg aagtagtcgg caagtccgag ctgtttcaac
     1801 agttcgacgg caaggatttc gtttttattg gtaatgactg ccagcgggat gcccaaagat
     1861 ttgagcaatg ccagcccggt tgcggtttcg ggataggggc gggtgaagac gctcaaatgg
     1921 tcgcggtagt atttcatata ggatacgaaa cctttttccc acagttcgga atcggcttcg
     1981 cggtcgcggt cgttggagag gacgcggtga accagtttgc cgatgccgtc gcccacatag
     2041 ctttcgacca ctttggcggg cagcggtttc ataccgagtt gttccaacat cgcttctgcg
     2101 gcggcggcaa ggtcggggac ggaatcgcac agtgtgccgt ccaaatcgaa ggcgacggct
     2161 tggacgtgtt cgatggctgc attcataatc tgatttcctg tcgggttgaa agggtttatt
     2221 ttaacatcgt ttgcacaggg cttctaatgt atagattgtt aacaatcgca acaggttttg
     2281 caggcggtgt tttcggattt cggggcggaa tcgggcaagg gtttgaaatc ccagcgatgt
     2341 tccaattaaa tttttaaaaa ataaaaggat gcctatatct ttatttaatt tgacatttat
     2401 ttttcggatg cgcgcgctgc tttttcaggc ggagtctggg ctgattccgt gcggcttgaa
     2461 aaataaaatc atatatagat taatcaaatc gggcttatgc cgactacacg ctattacatt
     2521 ttgtcgggaa attggttata gtaatgagcg aaatgcacgc ccctgaaaat ctttttgtga
     2581 aaaggaagca aaatgtctga agcccttgca aaagaaaccc tcaatccgtt tgaaatcgcg
     2641 cgcaaacagg tcaaaaccgc ctgcgaccag ctgaaaaccg atccggccgt ttatgaaatc
     2701 ctgaagagtc cgacccgcgt gttggaagtc aatttccccg tcaaactcga cgacggcacg
     2761 gtcaaaacct tcacgggcta ccgttcgcaa cacaacaacg ccgtcggccc ctataaaggc
     2821 ggcgtgcgct tccatcccgg tgtgaatctg gacgaagtca aagccctgtc gatttggatg
     2881 accatcaaat gctgcgtggc cggcattcct tacggcggcg gcaaaggcgg cgttaccttg
     2941 gatccgcgcg attattccga ggcggaactg gaacgcatcg cccgcgctta ttccgaagcc
     3001 atttctccgc tgatcggcga gaaaatcgat attcccgcac ctgatgtgaa caccaacggc
     3061 aaaatcatgt cttggatggt tgatgcctat gaaaacgtgg tgaaacattc cgcaccgggc
     3121 gtatttaccg gcaaaccggt cgagttcggc ggctctttgg cgcgtaccga agccacgggt
     3181 tacggcgtga acctcgccgc cgtccaagcc ttggaaaaac tgggcaaaga cgtgaagggt
     3241 gccacttacg ccattcaagg tttcggtaat gtgggttacc acacaggtta ttacgcgcat
     3301 caatccggcg cgaaagttgt tgcggtttct actgtcgatg ttgccattta caacgaaaac
     3361 ggtttggata tggaagccct gttcaaagag ttccaagaaa aaggcttcat caccaacgaa
     3421 gccggttacg gcaaggaaat taccaacgcc gaacttttgg ctttggatgt ggacgtactc
     3481 gccccttgcg cgctggaaaa tcaactgact tctgaaaacg ccggtaaagt ccgcgcgaaa
     3541 atcgtggtcg aaggcgcgaa cggtccgact acgcccgaag ccgacgttat cctgcgtcaa
     3601 aacggcgtat tggtcgtgcc cgatattctg gcgaactgcg gcggcgtggt cgtttcctat
     3661 ttcgagtggg tgcaaaacct gcaaggctat tattgggagt ttgacgaagt tcaggaaaaa
     3721 gaaaccgtcg tcctgcgccg tgcgttccgc gatatatgga acttggcgca agagtatgat
     3781 gtcgatttgc gaaccgcgtc ttacatgatg agtatccgcc gtgttgaaaa agcgatgaaa
     3841 ctgcgcggtt ggtattgatg tttgaacaaa aaatgccgtc tgaagccttc agacggcatt
     3901 tttgtgcggg cgggattaat ggtgcgaatg gccgatttgg aaggttaaag tcgagtagtt
     3961 cgcctgtttt tggcacacgc tttgatcggg gaagtcggct ttgtgttcga cattggcttt
     4021 ccagaagcct tggcgcaagg ggatgatgtc cacttcgcct ttgtcgtctg tgctgtcgga
     4081 gaaagcctgt gcttcggttt tgtgcgtttt gctgcggtcg ctggtgtcga agccgtcaaa
     4141 ggtggcggta acggtggcat tgggcagcgg ttcgccacgg aacagaacgc ggactttgaa
     4201 gcgttcgcct acgtgaatgt tggcgggatt gtccagcggg acgatttcca agttttgtcc
     4261 gaccggtttg gtgatgatgg cggtgtccgc gctttcgtgt ccgacgttga cgatgttttt
     4321 gccgaacata cgggtttgtt cgcaatagct tgcgtcaggc atttctttga tgcccgcctg
     4381 tttccagcct gctttgtttt ttgaccagaa agtaggctga tattcggcga tgacgaggta
     4441 actgccgtcc ttaacgggac ggttgcttcg gtactggtag ttgtatgtgc cgcgttgaat
     4501 catgttttcc ttgccttttt cggtaaccag ctgcatcggt ttgctgaaga tgtgcaggcg
     4561 gtctttggcg atgggttcga gttcgggaaa ttcgccgtag cccaagtcgg ctttaaggta
     4621 ttcgccgccg tgcgtgtggg cggtttcgac ccagacgcgg tgggcgtggg cggatgtggc
     4681 aaatagggcg gaaacggcga gcagtgtcaa tgttttcttc atggtgcagc ctttgtctcg
     4741 tgtgggttaa agattttgtt atgttataac aaaataggta tcgtgtgaag acggatttgc
     4801 tgtctgaaaa ctgtcttttt gtatagtgga ttaacaaaaa ccagtacggc gttgcctcgc
     4861 cttagctcaa agagaacga
//
LOCUS       DAXHRP010000153         4750 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.153, whole genome shotgun sequence.
ACCESSION   DAXHRP010000153 DAXHRP010000000
VERSION     DAXHRP010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.153"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..659
                     /locus_tag="ACFM72_001810"
                     /pseudo
     CDS             1..659
                     /locus_tag="ACFM72_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153708080.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(795..2198)
                     /locus_tag="ACFM72_001811"
     CDS             complement(795..2198)
                     /locus_tag="ACFM72_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HFC6258340.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(2267..3694)
                     /locus_tag="ACFM72_001812"
     CDS             complement(2267..3694)
                     /locus_tag="ACFM72_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HFC6258341.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     VVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            3930..4202
                     /locus_tag="ACFM72_001813"
     CDS             3930..4202
                     /locus_tag="ACFM72_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinosyltransferase"
                     /protein_id="HFC6258342.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWDTMLLLLWFLVRFAYKKPRQN
                     PFRQPDRRRYPDAVCLDYSQTILPEQRRNTGTRRVGQKIQRSRSRV"
     gene            4209..4559
                     /locus_tag="ACFM72_001814"
     CDS             4209..4559
                     /locus_tag="ACFM72_001814"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258343.1"
                     /translation="MQNGGGKIYQTADNVEGIMLLKVVPERTVSADAKTRDPMWDNAA
                     LQTSEGVNFIARFLGFFSDGEYRYVDVLQPNHSDIIRYSGKDFPLNQILNHIHPARYA
                     VTFENNVDSKLRRH"
     gene            4560..>4750
                     /locus_tag="ACFM72_001815"
     CDS             4560..>4750
                     /locus_tag="ACFM72_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258344.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSV"
BASE COUNT         1143 a         1242 c         1157 g         1208 t
ORIGIN      
        1 ccggatgcct atctgcatga aatcgccaaa cattttgatt gtacggcagc caccgtttgc
       61 tatgcactca aacagatggg gataacgcgc aaaaaaagac caccacttac aaagaacaag
      121 acccggccaa agtaacgcat tatttgacac agccggccga attttccgac taccaacgtg
      181 tttatttgga tgaaacagga tttgaccgct acctgttccg tccctatacc cgcagcctga
      241 aagggcaaat agtaaaagcg cagataagtg gaaaaagata ccaacgctta tctttggtgt
      301 ccgcacaagt cggcaaccgg ctgattgctc cgatggttta tcaaaatacg atgatcggag
      361 tctttttgaa gcgtggtttc agcaatgcct actgcccgca ttgactcaaa aatcggtgat
      421 tattttagat aatgcgcgat ttcaccgtat gggtgtctta cgggaaatgg cggaaaaatt
      481 gggacataag gtattgcctc ttgcacctta tttacctgag ctcaacccga ttgagaaagt
      541 gtgggcgaat attaagcggt atctgagaac cgttttgtct gattacgccc gatttgacga
      601 tgcactactg tcctattttg attttaattg aatatacatt tgaattaatt cgcacttaat
      661 ttaaatgtgt ttttaactgt gctttattta aaggcaatga gaatgtgaaa gtatcggatc
      721 aatcccaaag cagcctgcac tttcgaaacg gggtgcaggc tgctttggga atttcataac
      781 cgtttcagcc tgctttattc cgcaaatacc gtttccaacc ctaacccgct ctctttcacc
      841 aagcgcaaat aagccagcat gaatttatac cgtgcttgag ccagtttctg ttctgcttgg
      901 gcgacttcct gccgcgcccg tattacttcc agccggttgc ggatgccgta ttgttggccg
      961 gtttcggtcg atttcagttt caaacggctg ctttccaaaa cccgttcttg cgccatgatt
     1021 tggtaacgcg ccgcaccgct ttcggtataa gcctggcgta cggcgagttt gatgtgccgc
     1081 tcggttgcgg tcagctgtgc ttcggcggcc ccgtattgcg cttcggcttc atggattttg
     1141 cccgacaatt ctccgccggt ataaagcggc aaattcaact gtacgccgac gctcatccct
     1201 ttgccccgat agtggtagtc attattctgc gcagatgaag tgtagaggtt attctgatag
     1261 ccgacatggg cagaaacggt gggatagcgg ctgttctgtg ctgcccgaag cgcctgtccg
     1321 ctgctttgca gggcaagctg ctgcatccgg tattcatgat tgttggataa ggcaatgcgc
     1381 tgccattcat ccagactgta acgttccagc ttgggcagat agcgtgccaa caggttggcg
     1441 gtatctatgg cctcgatttg tttgctgtcc aggccggtgt agtcgttcaa ctggttttca
     1501 taggtttgtt tctcagccaa tacggcgatt tcttgggcca gggcattgtc gtaaccggct
     1561 ttggcttcgt gaatatccag cgcggtggca gcacctttat tgaataaagc ctgcgcctgc
     1621 cttacctgct gggcataagc ctctttttcc gccgcatggg cggcaacggt gtctcggctg
     1681 agtaaaacgt tgaaataact ttcggcaact ttcaacagca attcttcgcg tgccgcatcg
     1741 aaacgctgtt ctgcagcctg cgtatcgaac ctgctttggc ggtattgtgc aaatttggca
     1801 gcgtcaaata aggtttgtcc cacctgcacg ctccatccct gtgtttcgcg ggtggaagaa
     1861 atcgatggcg gctggcgctg gtagctggca ttggcggata catggggaag gaatgcggcc
     1921 ttggcttgtt gttgccgtgc gcgcactgca tcacgctggt aatgggacgc ttgaaaatca
     1981 gccgaatgtt gctgcgccgc ccgccatgct tcaggcagcg taaaagccga aacggatggg
     2041 gaaagggata gtggcaaggt aaaaagtgaa acgggtagga tatatttgga aaaataggat
     2101 ttcatagccg aaaatagttc atgttgcaaa tagggcgtca gtgtcaggca aacggaaata
     2161 ccgtaatctt gcattatcat tagattgagc aatgtcatcc gggcaatggt ttcaggcagt
     2221 ctgcatgtcc gaaccggcgg ataacaaatg cccagtatgg atccgcctat cgctccctaa
     2281 agctttcgtc caatttggtt tgcagcgggc ttaacagata atccagcacc cgccgtttac
     2341 ccgttttaat ctccgccgtg acattcatgc ccgccgtcag attcactgct ttgccgtcaa
     2401 tattcaaggt atgtttgtcc agcgacacca ccgccgtata aaccaagccc aactgttcgt
     2461 ggcttaccgc atcatggctg acacttttca ccttgcccgt cagataaccg tagcgcgtat
     2521 agggaaaact ctcaatcttc accaccgcat cctgtccctg ttccacaaaa ccgatgtctt
     2581 tgttcaatac caaaacttcc acgtccattt tgtcgtcatc gggcgcaacc accatcattt
     2641 tttgggcagc ctgcaccaca ccgcccaccg tataggtggc caattcctgc accgtgccgt
     2701 ccgcaggcga ctgtattgtc atcagctgct gccgctgctt tgccttatcc gtttggccgc
     2761 ggtattggtc aatctgttcg tttgcctggc gcagcgcatc cagcgtatcg cgtttcaggt
     2821 tctgcgtatt cagcacccga ttctgctccg cctgtgcaat ggccgcctga atctgcctca
     2881 tctgaccgcg cgtactttcc aaatcgttcc aattgctgac cgatttgctc tgctgctcca
     2941 aaaacgcatg ttccgaaata aaattgtcgg cccgcaaacg gcggtagtct gctgttttct
     3001 gctgctcgat cgcccccacc gaaaccagct tctgctcctg cgccttggcc gactgcaatt
     3061 ccgcctgatg gccgcgcaaa gccgactgca attgcgcatc ctgcgccgcc catgcctgat
     3121 actggtgctg cgccaacacc tgcgccgatt gcacatcggc atcggagaga cctaaagacc
     3181 gtgcttgcgc catatcgata tgcggcacgg tacggctttc caatgccgcc aataccgctt
     3241 cataacgcag tttggacaat tgggcagcct gcaaagcctg ctccgactgc accacatcgc
     3301 tgtctgttcc cacagcctcc agttccgcca gcgtttctcc ctgtttcaca tgctgcccgt
     3361 cgcgcacatg taccgcctta accaccaccg tttccagcgg ctggatggtt ttgctgcgcc
     3421 cgcccgacac cgttttgccc gaagccgccg ccacaatatc gattttgccg aaccaggacc
     3481 acaacaaagc caaaagcgca aacgccataa taaaacgcgc cgcccatttc ggagcggcag
     3541 agaccggcgt atcggtcagt tccaaatgcg cgggcaaaaa cgcctgttct tccgccgtgc
     3601 gtttgggcgg ttccaactgg tcgcgcaccg cccaaacatt gcgccatacg gtaatgtagc
     3661 gggaaagaaa ggatttcagg gcggagaaaa acataacggg tataaccttg gcaatataga
     3721 aacaggaaac aatataaata tgtaaaggaa ttttaacgga aagcgcggca gctgttaagg
     3781 gaaaggcggg aatattgaca aaaaataccc aagtcgttac aaatattcat tattttactg
     3841 cgtaacgcaa cgctgaagcg caggctgctt ttgagatgcg gcaaggttcg gcaaaaagca
     3901 gcctgcacat ttaaccacag gaactaccca tgtttaccac aaacgattta cgccatttcc
     3961 tagaaggttt ggccatccta ttctcaatcg gctattggga caccatgctg ctgttgcttt
     4021 ggtttctcgt ccgctttgcc tacaaaaaac cccggcaaaa tcctttcagg cagcctgacc
     4081 gccgccgcta tcctgatgct gtttgtttgg attattccca aacaattctg cccgagcaaa
     4141 gaagaaatac aggcacaaga agagtgggac agaaaataca aagaagccga agccgtgttt
     4201 aacgaacaat gcaaaacggc gggggaaaga tttaccagac ggcggacaat gtggaaggga
     4261 ttatgctgtt gaaggtagta cctgagcgta ccgtttcggc agatgcaaaa accagagacc
     4321 cgatgtggga caatgcggct ttacagacca gcgaaggcgt aaattttatt gctcgtttcc
     4381 taggattttt tagcgatggg gaataccgct atgtggatgt cctgcaaccc aaccattccg
     4441 atattattcg gtattcaggt aaagattttc ctctaaatca aatacttaac catatacacc
     4501 ccgcccgtta tgcggtaacg ttcgaaaaca atgtcgattc caagctgcgc aggcactgag
     4561 tggcaggtgc gaccatacgg attatcgacc gccaaactga cgaagtgatt gccaagaaaa
     4621 ccatctatgt ctttgaaaaa ggcttggacg gcacgggtgg ggcgagaatg ccgtggaagt
     4681 ttgctatctt gtgcaataaa gaaagactta cttcttcaga gccgttatcg gattttgttc
     4741 ttagcgtttt
//
LOCUS       DAXHRP010000154         4648 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.154, whole genome shotgun sequence.
ACCESSION   DAXHRP010000154 DAXHRP010000000
VERSION     DAXHRP010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4648
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.154"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            109..1050
                     /gene="miaA"
                     /locus_tag="ACFM72_001816"
     CDS             109..1050
                     /gene="miaA"
                     /locus_tag="ACFM72_001816"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HFC6258345.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSASERAFVPHHLIDIIPPTESYSAARFVEDCTRLVGEISSRGRFALIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIERALEVYYLTGKPMSEHLGRQSPHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRRYPGLTADSPAIRCVGYRQAWKYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSCTRLIEAAKRFFGA"
     gene            1054..1773
                     /gene="tadA"
                     /locus_tag="ACFM72_001817"
     CDS             1054..1773
                     /gene="tadA"
                     /locus_tag="ACFM72_001817"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HFC6258346.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLNGTLPQEITQHDKTRLFAELKNHPPVAAFPPQEEMEHFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLNRFFQNKRKG"
     gene            1778..2266
                     /locus_tag="ACFM72_001818"
     CDS             1778..2266
                     /locus_tag="ACFM72_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HFC6258347.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTTFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2332..3084
                     /gene="rlmB"
                     /locus_tag="ACFM72_001819"
     CDS             2332..3084
                     /gene="rlmB"
                     /locus_tag="ACFM72_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HFC6258348.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMSGESDLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKV"
     gene            complement(3146..4537)
                     /locus_tag="ACFM72_001820"
     CDS             complement(3146..4537)
                     /locus_tag="ACFM72_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HFC6258349.1"
                     /translation="MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLVFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
BASE COUNT         1178 a         1509 c         1109 g          852 t
ORIGIN      
        1 aggcatacgg taaacacgcc cccttgccgt cggcgtgctt ccgcaaacca aaatataacg
       61 tcggcacgct ttccgctata atccgcattt tcgcaaccct gaaacatcat gccgaccccg
      121 aaagcctttg ccctgctcgg gccgaccgcc ggaggcaaaa ccgcgctcgc cctcaaaatt
      181 gccgaaaccc tgcctgtcga aatcatcagc ctcgattccg cgctggttta ccgcgatatg
      241 gacatcggca cggcgaaacc gtccgcctcc gaacgcgcct ttgtcccgca ccaccttatc
      301 gacatcatcc cgcctaccga atcatacagc gccgcccgct ttgtcgaaga ctgcacgcgc
      361 ttggtcgggg aaatttcctc acgcggcagg tttgccctta ttgtcggcgg cacgatgatg
      421 tatttccgcg ccctgaccca aggtttgaac gatttgcccg aagccgacgc ctgcctgcgt
      481 gccgacttgg acgaacaaaa acagatgtac ggcttggatt tcctctaccg caccctgcaa
      541 aaagtcgacc ctgaaaccgc atgccgtctg aaaccgaacg acagccagcg tatcgaacgc
      601 gctttggaag tttattatct gaccggcaaa ccgatgagcg aacacctcgg cagacaaagc
      661 ccccatacgc tccccttcga tttgcatacc gccgccctga ttcccgaaaa ccgcgcccgc
      721 ctgcatgaaa acatcgccct gcgtttccac ctgatgcttg aacagggctt tatcggcgaa
      781 gtagaaaacc tgcgccgccg ctatcccggc ctgaccgccg actcccccgc catccgctgc
      841 gtcggctacc gtcaggcatg gaaatatctg gatggaaaaa ccgatttccc ggcatttgtc
      901 gagaaaggca ttgccgccac ccgccaactt gccaaacgcc aactgacttg gttgcgcaaa
      961 acacctttag actgcgttgc cgacccgttt tcagacggca cttcatgcac acgcctgatt
     1021 gaggcggcaa aacggttttt cggcgcataa accatgctga ccacaccgcc gctcgccccc
     1081 aaaaccgtcg ccgccctgca caggctcggt atccgtacgc tcgaagaact gcggcaaaac
     1141 ggttcggtca aagcctttct gctgctcaaa gcatcgggtt tgaccctcac gaaaagcacg
     1201 ctgtggcagc ttgagtcgct gctgaacggc acactcccgc aagaaatcac gcaacacgac
     1261 aaaacgcgcc tttttgccga attgaaaaac catccgcccg tcgccgcctt tccgccgcag
     1321 gaagaaatgg aacacttcat gcgcgaagca ctgcgccaag cagaacaatc cgccgctgac
     1381 ggcgaaatac ccgtcggggc agtcatcgtt tcagacggca aaatcatcgc atcggcacac
     1441 aacacctgca ttgccgactg caatgtcagc tgccacgccg aaatcaacgc cttggcacag
     1501 gcaggcagcg aaatgcaaaa ctaccgcctt gacggatgcg acatctacat caccctcgaa
     1561 ccatgcgcca tgtgcgcgtc cgcactgata caggcacgaa tcaggcgcgt gatctacggt
     1621 gcggcagaac ccaaaaccgg cgcggcagga agcatcgtca acctgtttgc cgacaaacgc
     1681 ctcaatacgc acaccgccat acggggcgga atcctgcaag aagaatgccg cgccgtatta
     1741 aaccgttttt tccaaaacaa aagaaaaggt tgaacctatg accgccttgc tcgtcatcct
     1801 cgccctcgcc ctgatagccg ccggtacggc gggcatcgtt taccccgccc tgcccggatt
     1861 ggcattgatg tttgccggaa cctggctgct cgcctactcc ggcggctacc aaatctacgg
     1921 cgcgggcgtt ttgtggacgg tcggactcat cagccttgcc ggcatactgg cggactatgt
     1981 ggcaggcata tgggggacaa aatataccgg agcgggcaag ctcgccgttc gcggcgcatt
     2041 ggtcggcagc atcatcggca tatttttctc ccttcccgga ctaatactcg gtccctttat
     2101 cggcgcggcg gcaggcgaac tgatcgatcg gcgcaatatg cttcaggcag gtaaagcggg
     2161 cttgggtacg ctgttggggc ttatcgtcgg tacgacattc aaaatcggct gcgccgtatc
     2221 catcttgttt atcctgttgg tgaaatacat cgcctacctg ttttaacccc ttcagacggc
     2281 ataccggcaa attgctataa tgccgtctga acccttttca caaagcacca tatggcaaac
     2341 caaagaccta tctacggctt ccatgccgtc aacgcccgat tgtggcaaaa ccccaaatcc
     2401 atcgtcgaac tctatgtcca agaaggcaaa aacgatgtac gcacgcgcga agtgttggaa
     2461 aaggcggcaa acgaaaacat ccgcgtatat tttgccgatg ccgaccgcct caacgccatc
     2521 agcaaaggtg cgcgccatca gggcgtggtc ggatttatcg atgcctccaa aaaccacgtc
     2581 cacctcgaag acgtattgga aaacttaagc gaaccgccgc tgctgctgat actcgacggc
     2641 atcaccgatc cgcacaacct cggcgcgtgc ctgcgtaccg ccgacgcaat gggcgtacat
     2701 gccgtcatcg caccgaaaga caaaagcgcg gggctgaacg ccaccgtcag caaagtcgcc
     2761 agcggcgcgg cggaaaccgt cccctacatc accgtaacca acctcgcccg caccctgcgc
     2821 gaattgaaag aatacggcat ttggattatc ggcaccgata tgagcggcga gtccgacctt
     2881 taccattgca atctgcccga cagcgcggcg tgggtaatgg gcaacgaagg cgacggtatg
     2941 cgccgcctca cgcgcgaaca ttgcgacatg ctggtgtcca tacccatgtt cggcacagtc
     3001 gaaagcatga acgtctccgt gtctgccgga atggtattaa gtgaaacacg ccgacaacgc
     3061 gtattaaaaa acgaaaaagt ataagcctca aaaacaatgc cgtctgaaac agggattctg
     3121 tttcagacgg cattcatttt caaaatcagt gttccaagtg gtcggtatca aacttgaccg
     3181 ccgcctcggt tttatcttcg ggcaagacca aattcagcaa gactgccgta atgccgccgg
     3241 cggaaataga gttttggaac aagacgggca ggtttttaaa cacttccggc tcaaacgcga
     3301 cacccaagcc caaaccgacc gacgttgccg caatcaccgc ttcgcgcctg cggatgccgt
     3361 gactgaccaa aatccgcacg cccgcaatcg caattaagcc gaacatcaaa accatcgcgc
     3421 cgcctaaaac cggactcgga atcgtcgtaa acgcgcgacc gacaacgggg aacagaccca
     3481 acagcaccaa aatcacggca atatatttgc ccacatgacg cgaagccacg ccggtcatct
     3541 gaatcacgcc gttgttttgc gcaaacgtcg tcagcggcag cgaacccaaa gccgtcgcaa
     3601 tcaccgacac caagccgtca gccaacacgc cgccgcgcag gcgtttggtg tattcctcgc
     3661 cttcaatcgg ctgatcggac accattgccg ttgcggtcaa atcgccgacc gcctcaaaca
     3721 cgctcaacaa gaaaatcgcg cccgccacaa taaacgcgtg ccagtcaaaa gcaaaaccat
     3781 atttaaacgg tacgggcagc gtaaccagcg gcaggttttg cagcgcggaa aaatccacct
     3841 tgcccaaaaa cagcgcgacg atatagccgg caatcagccc gaccgcaatg ccgctcatgc
     3901 gcaacagcgg gtttttcatg cagttgaaca ccaacacaat cagcaacacc agcgatgcca
     3961 gccccaagtt ttccatcgag ccgaacgtgc cgtccgcctt cgcgccgaag ccgccgccga
     4021 aatcggtaat gccgacgtgt accaaactca aaccaatgag catcacgacc acgccgctga
     4081 ccgtcggcgt aatcaccttt ttcaaatacg gcagaagcca cgccgagaaa cacaccaaaa
     4141 acgcgccgac aaacgatacg cccaagagcg tcgaaatcat cgcatcctta gtcaaaccgc
     4201 cctctttcat ccccgcgccg agcgcaatca tgacagtaac gaacgagaaa ttcaccgact
     4261 ggatggacag catccccgaa ccgaccggcc cgaagcggtt gacctgcaaa taagtgccga
     4321 cacccgacgc aaccatcgcc atcgacacga gatacgccgt catctccacc ggcaattcca
     4381 gcgcgccgcc cacaatcagc gcgggcgtaa tcatcggcac aaaaatcgcc aaaagatggg
     4441 taaccgcgct caagagcgca ttaccgaacg gcggcctatc ctccaaaccg tacaccaaat
     4501 caggcgcatc cgcacctttg cccaactgac cgctcattgt atttccttat tttaaaggtt
     4561 gaaaaatcca agcgcggatt gtagcgaatc tgccgcacgg cttcaatttg catttcagac
     4621 ggcatccgtc tggcccacac gtttacca
//
LOCUS       DAXHRP010000155         4628 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.155, whole genome shotgun sequence.
ACCESSION   DAXHRP010000155 DAXHRP010000000
VERSION     DAXHRP010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4628
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.155"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(84..308)
                     /locus_tag="ACFM72_001821"
     CDS             complement(84..308)
                     /locus_tag="ACFM72_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HFC6258350.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDTQEPYSLRDEIPPHY"
     gene            complement(309..1697)
                     /locus_tag="ACFM72_001822"
     CDS             complement(309..1697)
                     /locus_tag="ACFM72_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HFC6258351.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGGVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLTGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(1783..2604)
                     /gene="prmC"
                     /locus_tag="ACFM72_001823"
     CDS             complement(1783..2604)
                     /gene="prmC"
                     /locus_tag="ACFM72_001823"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC6258352.1"
                     /translation="MTFDKWLGLSKLPKNEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIASNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(3119..4603)
                     /gene="tldD"
                     /locus_tag="ACFM72_001824"
     CDS             complement(3119..4603)
                     /gene="tldD"
                     /locus_tag="ACFM72_001824"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HFC6258353.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGGYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSEI"
BASE COUNT         1057 a         1400 c         1211 g          960 t
ORIGIN      
        1 ttaatccact atatatctta ggtttgcatc ggcaaaatat tcaaacacag ccttttttaa
       61 ggaaatccgg atacggcggc acatcaataa tgcggcggaa tctcgtcgcg cagggaatac
      121 ggctcttgcg tgtcgggatt cctgtcctgc attttttgat acagcagcct caactgagcc
      181 tgctgcaaat ccagcgtctg ccgcaattcc gccaccatcg cgttcaggcc ggcgattacg
      241 tcctcctgaa gcgcggattg gatttccagc tctgtgatgc ggtgttccaa ctcttgaacc
      301 gcgtccattt acagcaccat cgcggcaatc cagccggcaa tcagcagcgg gatattgtag
      361 tggatgaagg tcgggataac ggaatcgcgg atgtggtcgt gctgcccgtc ggcgttcagc
      421 cccatcgtcg ggcccagcgt ggaatcggac gcaggcgaac cggcatcgcc caacgccccc
      481 gccgtgccga caatggcgac ggtggcaagc ggcgaaaaac ccaaaccgac acacaaaggc
      541 acataaatcg cggcaataat cggcaaagtg gaaaaggacg aaccgatgcc catcgttacc
      601 aaaagcccca ccaccagcat cgccaatgcc gccatacctt tgctgttgcc gaatatcgcc
      661 atactgcttt ccaccagcgg ctggatatgc ccggtcgcat tcatcacggc ggcaaaaccc
      721 tgcgcggcaa tcataatgaa gccgaccatc gccatcatct tgataccttc gccgaatacg
      781 tcgtttgcct tgtcgcggtt gatgaccccc aacatcataa atacggcgaa accgagcatc
      841 gcgcccaaca ccagcgagtc ttcatacatc aactggatgg caaaacatac ggcaatggcg
      901 gcggcggcgg ccaggctgcg gtaggcggac ggctgcggac ggtttgccgc atcggcgttg
      961 cccgccgtat cggcattgtt gctttggtac aggcgcggtt tgcggtaatg gacaaacgcc
     1021 agcaggagtc cggtcagcat tcccaacgcg ggaatcgcca ttgccgccat tacgttgatg
     1081 tttttcacat caagctgcgg cgcggcggaa tggatgttgc ccaacaggat ttcgttcaaa
     1141 aaaatcgcgc cgaagccgta aggcaggaac atataggtcg taaccagccc gaaagtaatg
     1201 acgcacgcaa tcagacggcg gtcgattttc aggcggttga acaccaaaag cagcggcgga
     1261 acaatcatcg ggataaaggc gatgtggata ggtatgatgt tctgactcat aatgcccatc
     1321 acaaggatga tggaaagcag cagccatttg accccgccct cgcccgaacg cacgctgtcg
     1381 ggcataccgc cccggttcag cttgcggacg accgcgccgg caagctgctg cggcaggccg
     1441 gaatgggtaa tcgccattgc aaacgcgccg agcatcgcat aagaaagcgc aatcttcgca
     1501 ccgccttcca aacctttgtt gaacacgggg ataatccccg cctgactgac ctgtcccgcc
     1561 gcatcggcaa tgttttgcag cggcataccc gccaccgcgc cgccgacaaa cgcgccgacc
     1621 gtcaggctca ataccacgtg cacgcgcgac agcgacagca ccagcataac gattacggca
     1681 actacgactg cattcattgt ttatcgctcc aaacctataa atgtttacat atcgaaacac
     1741 atcataaccc aataatggaa aacccgccaa ttttgcaaac aattatttca aatgcttcat
     1801 atacttcccc agcgtaaccc tgtccaaacc cgccaagtcc ggcagggttt ccactcctga
     1861 aaaaccattc tccgccaaca cgccgcgcac cgccgcgccc tgatcgaaac cgtgttccaa
     1921 caacaaaaaa ccgccttccg ccaaacggtc gggcgcgcct tgcgccaagg tgcggatgca
     1981 gcttaggccg tctgaaaagt cggtcagcgc gatttgcggc tcaaaccgca aatcgccttg
     2041 caacaaatgt ttatcgccgt tttcgatata gggcgggttg gacgcgataa tgtcccattt
     2101 cccttcagac ggcatatcgg tgtcgaacca cgaaccgtgt gcaaattcga cccgcgcgcc
     2161 caaatccgcc gcatttttcc gcgccgtttc aagggcgggc gtgctgatgt cggatgtgcg
     2221 cacaaacgca tcggggcgtt cgagtgcgac ggttacggca accgcgccgc tgcccgtccc
     2281 caaatcccac acgcgcccgt tttcgggcag gcgcgccaat acggcttcga ccaaatgttc
     2341 ggtttcgggg cgcggaatca gcacgctcgg attgactgta aagcgtctgc cataaaattc
     2401 gcgcacacct aaaatatagg caaccggctc gccgttcaga cggcgttgcg ccagcctgtc
     2461 cgcccgctgt cggacttcgt ccggcatttc ttccccgccc cgcgtcaaca actgcacgcg
     2521 cgtatattcc gaaacatatt gcagcagcat tcttgcttca tttttaggca gttttgacaa
     2581 gcccaaccat ttatcaaacg tcatttttat cccgtctgcc gctgatgcgg cttttctttc
     2641 cttattcttt ccggcaaacg taccgatggt ggcaaccgca aatgcggcat accacaaata
     2701 aaatcctgca ccgtagcgca caatatccga tgtattccct gcttcatcga cgtatacggc
     2761 tttcacactg aaagccacca acgccaagcc ccaaagtgcc gcatggacag gcacgacctt
     2821 cttccgcaac gccagcaaaa caatggccgc caaccaaaca taattcgcat agaccgcaca
     2881 atacctgata tccaaagaag caaatatcga ccccaaaatc aaaacggtca aaccctccat
     2941 gcttccatga ttgcccaaat aaaatgcaac attggataaa gacgctatcc acagggcaac
     3001 cgacaccagc aacatcacta tgggaaaact tggtttccga ttctgttcct gcatggtttt
     3061 atcctaatgt aaaaggccgt ctgaaaacct ttcagacggc atcgtgccgg attctgcgtc
     3121 agatttcgct accgccgacg gtcagtccgg catcaatccg caaggtcggt tgccccacgc
     3181 cgacggggac gctctgccct tctttgccgc acacgccgac accgctgtcg agcgcggtat
     3241 cgttgcctat catggaaacg tgtttcagca cttcggggcc gttgccgata atggtcgcgc
     3301 ctttgacggg atattgcagt ttgccgcctt cgacccacca cgcttcggat gcactgaaca
     3361 cgaacttgcc gctggtgatg tccacttgtc cgccgccgaa gttgacggcg taaatgccct
     3421 tgtcgatgga cgcaatgatt tcttccggct catagccgcc gttttccata aaggtattgg
     3481 tcatgcgtgg cataggggcg gaagcgtaac tttcgcggcg gccgttgccg gtcgattgcg
     3541 tacccatcag acgggcgttg gtttcgtcct gcatataacc gaccaaaata ccgtcttcaa
     3601 tcaatacagt gcggcgggtt tcgttgcctt cgtcgtcgat attgagcgaa ccgcgccggc
     3661 cggcaatatc gccctgatcg acgacggtaa cgcctttggc ggccacgcgc tcgccgattc
     3721 tgccggaaaa gacgctggtc tccttgcggt tgaaatcgcc ttccaaaccg tgtccgaccg
     3781 cttcgtgcag caacacgccc ggccagccgt tgcccaaaac aacggtcatc tcgccggcag
     3841 gcgcggggcg ggattcgagg ttggtcaggg cttgtttgac ggcggcatcg acaaactgcc
     3901 gcaccaagtt ttcatcgaaa taagccaagt cgtagcgtcc gccgccgccc gcgctgccct
     3961 gttcgcggcg ttcgccctgt ttggcgataa cggtaacgtt caggcgcacc atcgggcgga
     4021 tgtcggcggc gtgtttgccg tccagacggg cgaggtaaac catatcgtat tcgcaggtca
     4081 aaccggccat cacttgcacg atgcgcggat cggcggcttt ggcgattgct tccactttgt
     4141 tcaacagcgc gactttggcg gcagaatcga ggccggcaat ggggtcggac gcggaacaaa
     4201 ccggcttgcc gcgcgtttca gacggcattt tggcggacac cttgccgcct gccgccccaa
     4261 tcgcgcggac ggcgcgggcg gaacggttta tcgaatcgat gcacaggctg tcggcgtagg
     4321 caaaggcggt tttatcgccc gaaacggcgc gcacgcccac gccctgattg atttggaagc
     4381 tgcccgattt gacgatgccc tcttccaaat gccagctttc ataagcggtg cgctggcagt
     4441 agatgtcggc gtaatcgacg tggtgcgcgc cgatgatgca caggcttttg gcgagcagtt
     4501 cgggggaaag gcggttggct tcgagcagcc gcgcctgtac ggcggaatag gtcggatgca
     4561 tagtgtcggc gcataaaaaa tcaggggctt gattatacgg catttgttat atagtggatt
     4621 aacaaaaa
//
LOCUS       DAXHRP010000156         4557 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.156, whole genome shotgun sequence.
ACCESSION   DAXHRP010000156 DAXHRP010000000
VERSION     DAXHRP010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4557
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.156"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(52..273)
                     /locus_tag="ACFM72_001825"
                     /pseudo
     CDS             complement(52..273)
                     /locus_tag="ACFM72_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="taurine catabolism dioxygenase TauD"
     gene            complement(272..379)
                     /locus_tag="ACFM72_001826"
                     /pseudo
     CDS             complement(272..379)
                     /locus_tag="ACFM72_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(425..1153)
                     /gene="pdxJ"
                     /locus_tag="ACFM72_001827"
     CDS             complement(425..1153)
                     /gene="pdxJ"
                     /locus_tag="ACFM72_001827"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HFC6258354.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQDKIAEFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQIRQFERIQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1177..1968)
                     /gene="recO"
                     /locus_tag="ACFM72_001828"
     CDS             complement(1177..1968)
                     /gene="recO"
                     /locus_tag="ACFM72_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HFC6258355.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(2002..3129)
                     /gene="pheA"
                     /locus_tag="ACFM72_001829"
     CDS             complement(2002..3129)
                     /gene="pheA"
                     /locus_tag="ACFM72_001829"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HFC6258356.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDDCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEIVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3168..4400)
                     /locus_tag="ACFM72_001830"
     CDS             complement(3168..4400)
                     /locus_tag="ACFM72_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HFC6258357.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLIVYCLAVAAIVFVSSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENGQSEYL"
BASE COUNT         1022 a         1305 c         1241 g          989 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta tattacataa tcatcgcctc aatatttaat
       61 atcccaaaat atagatttaa aaccatcgcc tttgtggttt gtcagcattc ctaattgaga
      121 tagaaagtca aataatttct tgtttctccg gctgccatca agatggttta gattaagacc
      181 tcgaacaata caatacccaa tactctgtac tgtattgtga atttcttcta tcaaactatt
      241 attgtttgca gataaaatat acttttgatt catatagtga attaaattta aaccagtacg
      301 gcgttggctt gccttgccgt actatttgta ctgtctgcgg cttcgccgcc ttgtcctgat
      361 ttaaatttaa tccactataa catatccctg tcgtgaaatg ctgtctgaaa gggtttgcct
      421 gcccttacgg cagcagcctt gccctgaaca tcgcctcctt catttggcgc acggcttcgg
      481 gcagtccgag aaagagggct tgggcaatca gcgaatgccc gatgttcagt tcgcggatgg
      541 cgaggatttg ggcgatgggg gtaacgttgt gtatggtcag tccgtgtccg gcgttgacga
      601 ccaagcccaa atcgccggcg aaatgcgcgc cgttttggat gcgctcgaac tgcctgattt
      661 gttcggcgtg gctgcgcgcg tcggcatacg cgccggtgtg cagctcgaca acgggcgcgc
      721 cgacatcata ggcggcttgg atttgcctgt cgtccgcatc gataaacaag gacacgcgta
      781 tgcctgcgtc ggtcaggatt ttggtgaact cggcaatttt gtcttgttgc gccaatacgt
      841 ccaaaccgcc ttcggtcgtg atttcctgac gtttttccgg cacgatgcac acgtcttccg
      901 gcatcacttt aagcgcgttt tcgagcattt cttccgtcaa cgccatttca aggttcaggc
      961 gcgtgcggat ggcgtttttg acggcaaaca catccgcgtc tttgatgtgg cggcggtctt
     1021 cgcgcaggtg catggtaatc aggtcggcac cgtgcgtttc ggcaaccagt gccgcctcca
     1081 cggggctggg ataagtcgtg ccgcgcgcat tgcggacggt agcgatgtgg tcgatgttga
     1141 cacctaaaag cataatcttt ccttttattt ctgccttcag acggcatttg aagccgtgcc
     1201 gtccgaagtc gggacggttt cccgggcggt ttctttgcgg tcaaactgcc gtatctgttc
     1261 caacacctgc cgcgatttca gcccctcggg caacaggtgg cggataaaaa gccgtgtgat
     1321 tttcaatgcc tgttgcaggc tttcggcggt gcggaaactg ccttcgcgca aatcgatcag
     1381 gctttgccct tcgacaattg cgccggcttc gtgcgaaagc gcgtctgcgt cctcgcatac
     1441 gggcatgacc gcctcttcgg gcatcagccg gtaggttttg tccgccaaaa tatcgccgcc
     1501 cgtgccgtcg gcgtgcaaat cgggggcaac gcccaaggca ttgagcagct tccactcgaa
     1561 gcggcgcaaa tcggcaatat ggttggcttc acggcacacc gcctccatca cttccgccaa
     1621 cgcgtcgtat aactcgggca acggatcttc gcggacggtc aacttcagca tcaactcgtt
     1681 cacatacaat ccgctgaaca aagccctacc ctgcggctgc ggccacccgc ctatccattc
     1741 ggcgcgatgt agggtcttca actcttgcga accataccaa gacgcactca ccggcacaaa
     1801 cggcaccaac acgccgcgca attcgctctg ccgcttgcgc gcgcttcttg ccaaaagtgc
     1861 cacacgcccg taacggcggc tgaaggcttc gacccgcagg ctgctttcgc gccatggcga
     1921 ggaagccaac aggaagacgg gttcgtggtt gactcggtgt tcggacatca tgcctgaaat
     1981 gccgtctgaa cgctgccgcc gctacaaaac ggcggtcggg tacgaaccga tgactttgac
     2041 gaacgaagcg cgttcgccca agcgttccaa tgccgtctga atctgcgcgt cccggcggtg
     2101 tccttcgatg tcgatgaaga acaggtattc ccacaaaacg gatttgctcg gacggctctc
     2161 aaacttggtc atggaaatac ccgactcggt cagcggttgc agcagcgagg caaccgcgcc
     2221 tgcccggttg ggcgcggaaa cggccagcga agtcttgtcg ctgccgcttg caccggtttc
     2281 gtgatgtccc atcaccaaga agcgcgtggt gttgttcggt tcgtcttcga tgcactcggc
     2341 aaccatatcg agtccgtaga tttccgccgc cgtgcgtccg gcgatggcgg caaccgtacc
     2401 gtcgtccgat tcggcaacca gccttgcggc ttcggcattg ctggacacgg caatccgttc
     2461 ggcgttgggc aggtgtctgc ccaaccagtc gttgcactgc gccaacgcct gcgcgtggga
     2521 aaagactttg gcaatgcctt cggtgctgcc gttgttttta cgcaaaaggt tgtggtggat
     2581 gcgcaaaacg atttcgccgc acgcctgcaa cgcggtaacg gcaagcaggt ctaacgtgcg
     2641 accgaccgag ccttcggtcg aattttccac gggggcgacc agataatccg cctgacgcgt
     2701 ttcaacctgc ttgaagcagt cgtctatggt cggacacgcc atggtgtgcg cggcgtgtcc
     2761 gaaatgtttg attgccgcct gctgggtaaa cgtgccctgc ggccccagat aggcgatggt
     2821 cagcgggcgt tcgacggcga ggcactcgct catcacttcc cgaaacaggc gtgctaccga
     2881 ttcgtcgggc agcgggcctt tgttcaaatc ctgaatgcgg cgcaacacgg cgacttcgcg
     2941 ttcggggcgg tacactgcgc ccgtgccttt cagctcgccg atggcgtggg cgtgttgcgc
     3001 acgttcgttg agcaggcgca ggatttcggc atcgatggtg tcgatggcgt tgcggtgggg
     3061 aaggaggagt tcgtcgatag tttgggacat aatttcgcct gaacagtaat ttatcgtgca
     3121 ttctaacatc aaatgccgtc tgaaacggtt tcagacggca ttttccgtta aaggtattcg
     3181 ctttgcccgt tttctttcca cgcacgatgc gagcagagcc acagaagcgc aatgccgcaa
     3241 gaggtggacg cggtcatcgt tgccgccatc acggttgccg aaccgtcgtg caagaaggtc
     3301 gccgccatac ccacccccgc gccgattaaa gattggaata cacccaatac ggcgtttgcg
     3361 ctgccgccct cttctttgaa ataggacata aaacacgcct gcgtgtttgc accgaccaag
     3421 ccctgcgtac cgacggaaaa catcacgcac gcgaccagca gccaaaacgg gggcaacccg
     3481 aaaaacagca cggcggcgag ttgggacagg ttggcggcaa actggacgac aatcccccac
     3541 agcaggatgc tttgcggatg cacgccggtt ttgagccgcc acgcggtaac gcggttgaaa
     3601 aacatcatcg tgatgatgtt gagtgcaaac gcccaagcgt attgatgagg cgtaacacgg
     3661 tagagctgct ggtacacgaa ggaagattcg gtcagaaagg cgaacatcga accgaagctg
     3721 aatgcctgaa aaaacagata acccatcgca gcacgggttt tcaatacgcg cttgaaccgc
     3781 cccgccacca gcccgaacac gtcccgtccg attttgccgc cgacggcggg cttgggcagg
     3841 aaatactgta ccaaaccgag cagcaccagc gaatacgccg ccagaaaaac aaaaatcgcc
     3901 tgccagccac ccaagccctg caacaatgcg ccgaccatgg gtgcgaccag cggcacaacc
     3961 atcaaaatga tgccgataag ggcaaacatc tgggcggctt tgcgtccgga ataataatcg
     4021 cgcaccattg cgccgacgat gaccacagtc atgcccgcac cgaatgcctg cacgacgcgc
     4081 aggttgagga gctgttcggc actcgaaaca aatacgatgg cggcaacggc aaggcaatat
     4141 acaatcaaac cggtcagggc gacgggtttg cgccctttga tgtcggacac cgaaccgccg
     4201 accacctgtc cgaacgccgt gccgaacata aacaaactca aactctgttc gatgcggtga
     4261 acatccgcgt tcagcgattg cgccatttcg ggaatcgcgg gcaggtaggc atcgatggaa
     4321 aacggcatca gcgtaaccag catcgccatc aaaaccgcca tcagtttttc gctcatttca
     4381 ggataatggg cagaaggcat aaattctcgt ccgattcgca aacaaaccgc ccggcggcgg
     4441 aaaacacaat acgcggaaac ggaaaatttt aacacaccgg cacaaacagg cggcaacaaa
     4501 agccccggca aaaccggacg aaccggaacg atatagtgga ttaacaaaaa ccagtac
//
LOCUS       DAXHRP010000157         4524 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.157, whole genome shotgun sequence.
ACCESSION   DAXHRP010000157 DAXHRP010000000
VERSION     DAXHRP010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4524
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.157"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(1017..1787)
                     /gene="xth"
                     /locus_tag="ACFM72_001831"
     CDS             complement(1017..1787)
                     /gene="xth"
                     /locus_tag="ACFM72_001831"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC6258358.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRVDLDTRALERPSDHAPVTAEFDW"
     gene            complement(1847..2128)
                     /locus_tag="ACFM72_001832"
     CDS             complement(1847..2128)
                     /locus_tag="ACFM72_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HFC6258359.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSGHLSRLRVEGLVDFTRYHRIIEYRLISEDAATILRTIRDLENKRAV"
     gene            2230..2463
                     /locus_tag="ACFM72_001833"
     CDS             2230..2463
                     /locus_tag="ACFM72_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258360.1"
                     /translation="MDDCTGLYVPFPTFFANTRKGGLSDGIKLPPLPCLTLLPNGIIR
                     IVQKMPYNRRTSCPADASVPSGKQNTCLKRCFF"
     gene            complement(2596..3477)
                     /gene="nadC"
                     /locus_tag="ACFM72_001834"
     CDS             complement(2596..3477)
                     /gene="nadC"
                     /locus_tag="ACFM72_001834"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HFC6258361.1"
                     /translation="MPSENTLFSLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLACLAFQTMDPSVRFQAEIQDGQAVRAGQTLAVVEGNACAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(3553..4491)
                     /locus_tag="ACFM72_001835"
     CDS             complement(3553..4491)
                     /locus_tag="ACFM72_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258362.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1048 a         1128 c         1199 g         1149 t
ORIGIN      
        1 ctgatgcaga tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta
       61 caaatagtac ggcaacgctg tactggttta aatttaatcc actatatttt gtaatagctg
      121 ccattatgcc tactaggata tataccttct atataatcct tatttaaata aaaaccctta
      181 taaaaatctg tgttatctgt cgggattgaa aaaaagattt tatctttctc atcaggttta
      241 tatttgctat caatatcaaa aagagaataa ggattacaat gagttcgaca tactaggtaa
      301 aaatttatat cttggatcat gaaatattcg atatttatca ggatcgaaag atgctaaaaa
      361 ttcatcaata ttggtactgg atattttgtc atcactaata aacatcgcta gagatgggcg
      421 actttgattt tccatttgtt gattagtaaa ggatataaat actaacttgc cattgtcaaa
      481 ccacatagat ttatatagtg gattaaattt aaaccagtac gtcgttgcct cgccttgccg
      541 tactatttgt actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactatag
      601 ttattgcctt tgggagaatc aattctgaca gcacataaca taggttcatc tttacagtcg
      661 ttatattggg tttcatcaaa ctcaactgca tagcacaata aaggcaatag gaaaaaaagg
      721 agattaattt attactatac ataaggcagc ctgactattc attctaaaat aaatccggtt
      781 tttaatattt gattctgctc cggattatat acataataaa ttttactgct ccaaaatctg
      841 atattaaccc tatggatttc ataaattttt cagaaaaata ggctgtgctt gaacaatccg
      901 ccgactccgg ctgtttgtca gggaaaaggc aattattttc ggttagtcag cagcctatcc
      961 tattgaatca cttaaagata tggatgtttg tcaacgccat atcaaaacac ggtcttttac
     1021 caatcgaatt ctgccgtcac cggcgcgtgg tcgctcggac gctctaaagc gcgtgtatcc
     1081 aaatcgacac ggacatcctt caaaacggcc gccatttcgg atgtaaccaa tatatggtcg
     1141 atacgcaggc ccagtttgcg ctggaacatc gcgccgcgat agtcgaacca tgtgtaaaac
     1201 gcaccttcgg gatggatatg gcgcaaactg tcggtcaatc ccaaatccag caggttttga
     1261 aaccactgcc gttcgacggt cgaacagtgg attttttcat accatttttc agggtcgtaa
     1321 cagtccgcat cggcaggcgc gatattgaaa tcgcccaaca gcaccagttt gccgtggcgt
     1381 gccatttcat cgcggacaaa ttcggttaac gcggcaaacc attgttcttt atatttgaat
     1441 ttcgggctgt cgagggcttc gccgttgacg caatagacat tgatgacgcg cacgccgccg
     1501 acggttgccg caatcacgcg ccgttgcgga tcgtccggca gcgcgggcag cccgatatgc
     1561 acgtcttccg gcgcgttgcg gctgacgatt gccacgccgt tgtaggtttt ctgcccgctc
     1621 caaacacagt gccagcccat catctgcaag gcggcagccg gaaatttgtc ctgatcgagt
     1681 ttgagttcct gcaaaaccaa aatatcgggc ggattgtcgg caagcaggtt ttgcacctgc
     1741 ggcagccgca cattgagcga attgacgttc caagtggtga ttttcataac atttccgaaa
     1801 aatgccgtct gaaacgttca gacggcaaaa ggaaaggatt ttaacactat accgcgcgtt
     1861 tgttttccaa atcgcggatt gtccgcagaa tcgttgccgc gtcttcggaa atcaggcggt
     1921 attcgataat gcggtggtaa cgcgtaaagt ccaccagacc ttccacgcgc agtcggctca
     1981 aatggccgga aacggcggtg gccggcaggg ataaggattt tgccagttcg gcgatattgc
     2041 gttcgctgtc caacagttgg atcagtatcg ccatacgttc gggatgcgcc ataagtttga
     2101 gtatggtgtg gagcggtatt gtgttcatcg gtattcctaa aacctttgcc gcccgccaag
     2161 cggattgacg ggcgacagat atggatgatt gtgattatct ttataaatcg tattataaat
     2221 caaatattta tggatgattg tacaggattg tatgttcctt ttcccacttt ttttgcaaac
     2281 acgcgtaaag gcgggctttc agacggcata aaactgccgc ccctaccctg cctcaccctg
     2341 ttgccgaacg gaatcatccg cattgttcaa aagatgcctt acaaccgccg cacgtcttgc
     2401 cctgccgatg cctccgtgcc ttcgggcaaa caaaatacct gcctgaaacg ctgttttttc
     2461 taaagcatca cgaccttcac gaaaaatgcc gtctgaagaa tatttcagac ggcatttcct
     2521 ccttgaggca ataaccggat tacggttagg cggttccttg tctgacatat cagacaactg
     2581 ccgacaccct aaaactcatg ccaagaaatc caaacctatg tccaacgagc ggctgctgtg
     2641 ggtcagatag ccgagggcga tgccgtccac gccggtttgc gccacgcgct tcaggcggtc
     2701 gaagccgatg ccgcccgatg cttcgcaata gacggtgtgg gggtgggcgg tttgcgtgtg
     2761 gcagcggttt gccgcttctt tcagggtttc gtcgtccatg ttgtccagca aaatccgttc
     2821 cgcgcccgct gcgatggctt cgtccagttg tgccaacgtg tccacttcga tttccacgca
     2881 ggtcaatgct ccgaccgcct gttttgcctg ccgaacggct tgggcgatgc tgccgcaata
     2941 ggcgaggtgg ttgtctttga tgagcacggc gtcgtccaag cccatgcggt ggttcacgcc
     3001 gccgcctgcc ctgacggcgt atttttgcag gacgcgcagc agggggatgg ttttgcggct
     3061 gcacacgatg tctgtaccgt attcggcgac ttcggcaacg gcacgcgcgg tggcggtggc
     3121 gatgccgctt aagtgcgtga ggtagttgag tgcggtgcgt tcggcggcga gcagcgcgca
     3181 ggcgttgcct tcgacgacgg ccagcgtctg acctgcgcgg acggcttgtc cgtcttggat
     3241 ttcggcttgg aaacggacgg acggatccat cgtctgaaag gcgagacacg ccaagtccat
     3301 accggcgata acaccgtctt cgcggctgac gaggaagagt ttggcggttt tgtcgggggc
     3361 gataacggcg gcggacgtaa tgtcgccgcg cctgcccaag tcttcgctca aggcttgttc
     3421 gactatgggg cgcaacaggg tgtcgggcag ggaaaagagg gtgttttcag acggcatgag
     3481 gtttcctttg tcgaaaaaga ttgatgttgc accgatgggg caaaacttca tttgatgccg
     3541 tctgaaaacg ggctaacggc tgcccagcgg cagtccgatg tccgaaatca gcctgtcggg
     3601 caggacgtcg tcgcggaagc ggcaaagctg cgcgggacgg cctttgctgc ccgatacgcc
     3661 ggtatccgac ggctcgatga ggttttgctg ctgaatctgg cggcggaagt tttgcttgtg
     3721 cagcaatctt ccgctgatgg cttcgacgct gttttgcagt tgcagcagcg tgaattcggg
     3781 cggcatcagc tcaaaaatca cggggcggta tttgattttg gcgcgcaggc gggacagggc
     3841 ggtcgccaat acgcggcggt ggtcgtggcg catgggctgc cctgtgagcg cgaaatcgaa
     3901 gtttgcctgc ggctcggcgg cttccactat caggccgctt tcatacagca tttcatagcg
     3961 ttgcaaaacg tattcttccg accagttttc cggttcgacc ccccaacaca aatgaatgcg
     4021 cttgagccgc atttgacgca cttcctccgt gtccgccgag tttgcccaaa tgcgcagtcg
     4081 gctgacgacg gcgtcgcgct gtccgccgtc ggtgcgcaag tcttcccacg ggaaatagcc
     4141 gtagcagtcc tgccatttcg catcgggatg caggatgctg tcggctgcct cgcgcaccag
     4201 ccccaaatag ctgacgtaca agacgggcat gccgtgttcg ttgcggcggt gggtatcgac
     4261 aaaggtgtaa agctgttcca catagcccat aggctgcgaa gtctgcttgg caacccacag
     4321 cttcacgccc gcctgcaagg aattgcgcag aggggagagc gggccgttgg gcaggagtgt
     4381 gccttgggcg acggttaata cccgcaggcc gccgtcggta acggcaatca atacgggaac
     4441 cagctcgacg atgctttgcg gcggggcttc ggcttcgggg taggcatcca tgctcggctt
     4501 tctgcgggtg ggaaaggctt tatt
//
LOCUS       DAXHRP010000158         4522 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.158, whole genome shotgun sequence.
ACCESSION   DAXHRP010000158 DAXHRP010000000
VERSION     DAXHRP010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.158"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(58..1851)
                     /locus_tag="ACFM72_001836"
     CDS             complement(58..1851)
                     /locus_tag="ACFM72_001836"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HFC6258363.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIVKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2097..3206
                     /gene="proB"
                     /locus_tag="ACFM72_001837"
     CDS             2097..3206
                     /gene="proB"
                     /locus_tag="ACFM72_001837"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HFC6258364.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKLRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3219..4481
                     /locus_tag="ACFM72_001838"
     CDS             3219..4481
                     /locus_tag="ACFM72_001838"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HFC6258365.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALFAMADSLEAAAADI
                     LAANRQDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSALPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLEQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVW
                     HIETHSTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1039 a         1227 c         1255 g         1001 t
ORIGIN      
        1 gccgcaatgc cgtctgaagc ctttttatgc ttcagacggc atcgtctgtt ttcacgctca
       61 aatcgtaccg ctgccttgcg ctttcggttt ggcggcacta aattccagtt tgctcaaagc
      121 ggaaaggtag gctttggcag tggcaaccaa aacgtcggta tccgcgccct gaccgttgac
      181 gacgcggttg ccgcgtgcca gacggacgct ggtttcgcct tggctttccg taccttgcgt
      241 gacggcgttg acggaataaa tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc
      301 tttgaaaatt gcatcaaccg gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt
      361 gatgctgaac acgatgtcgg cgcgcggctc ttcgccggtt tcggtgctga ttttttggga
      421 gatgaatttg tagctctcgg cattcatgct gcccatttcg tcggatacca gtgcgtgcag
      481 gtcttcatcg aagatttcgc gttttttgtc ggcgagttct ttgaagcggg caaacgcggc
      541 gttcagtgcc tcttcgcttt ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc
      601 gttgcggccg gacaatttgc ccaaactcaa acggtttgtt gcccagccga ccgattcggc
      661 ggacataatc tcgtaagttt cgcggtgttt cagcaccccg tcctgatgga tgcccgattc
      721 atgcgaaaag gcattggcac cgacaatggc tttgttgggc tgcacgggat agcccgtaat
      781 ggtggacacc agtttggacg aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc
      841 gaacaagtcg tggcgcactt tcaacgccat cacgatttct tcaaccgaag cattgcctgc
      901 acgttcgccc aagccgttga cagtacattc cacctgacgc gcaccgcctt ttaatgcggc
      961 aagcgaattg gcaaccgcca agcccaaatc gttgtggcag tgtgccgacc aaacgacttt
     1021 gccgccgttg ggcgttttga caatcagttc gcggaaaaat tcttcggttt tgtacgggat
     1081 ggaatagccg acggtatcgg gaatattgat ggtggtcgcg cccgcttcaa ttaccgcgcc
     1141 gcagatttcg gcaaggaaat cgatttccga acgcaacgcg tcttcgcagg aaaattccac
     1201 atcgtcggtg tattcacgag cgattttcac cgctttgacc gccgcctcaa tcacctgctt
     1261 cggcttcatc ttcaatttgt actccatatg gatggggctg gtggcgatga aggtgtggat
     1321 gcgttttttc ggcgcgggcg caacggcctc acccgcctga cggatgtccc gctcgatggc
     1381 acgggacaat gaacagaccg ttgatttggt aatggttttc gcaatcgcat tgaccgcctc
     1441 gaaatcgccc gggctggcag cggcaaaacc cgcttcgatg atgtccacac ccaatttttc
     1501 cagctggcgg gcgacgcgga ttttttcctc tttggtcata gcggcgccgg gcgattgttc
     1561 gccgtcgcgc agggtggtgt cgaaaatgat aacgcggttg gcctgtgtca tttctgttct
     1621 ctccagagat tcgttttttt gtaaaaaagc attcaaatcc agcggcctgc cttgcgattc
     1681 ggcaagcgcg gtcagctttt gcagttgcgc caaaggcagc gacccgcgcg tgcgccattt
     1741 atagatggcg gcggtcgtcg cggcattttc gggatcgtgc tgtttcaacg cttcggcaag
     1801 cgcgttcacg ccgccgaaat aagcaaccaa gcggtctata tctaattgca tggtagtcct
     1861 tgtctaaaat aaatcagcct acagcagaaa tatggacagg attatacgca ttttggacaa
     1921 aacggcaata taaatttgaa aaaatctcaa taaaccgcca tagattttat taattttata
     1981 cattttgtcc attttattgc agacgcggcg tgattgttga caattgcggc agaacagggc
     2041 aaattcggcg gcacaaggtg gcaacgagac aggacaaacc aacaaggacg gaaacaatga
     2101 aatacaaaag aatcgtattt aaagtcggca catcttcgat tacccattcg gacggcagtc
     2161 tctcgcgcgg caaaatccaa accatcaccc gccagcttgc cgcattgcat catgcgggac
     2221 acgagctggt cttggtgtct tccggcgcgg ttgcggcagg gttcggtgcg ctgggtttca
     2281 aaaaacgtcc ggtcaaaatc gccgacaaac aggcttccgc cgccgtcggg caggggctgc
     2341 tgatggaaga atatacggca aacctgtctt cagacggcat cgtgtccgcg caaatcctgc
     2401 tcagccgcgc cgactttgcc gacaaacgcc gctaccaaaa tgccggcggc gcactttccg
     2461 tgctgctgca acgccgcgcc gtccccatca tcaatgaaaa cgatacggtt tcggttgagg
     2521 aattgaaaat cggcgacaac gacacattga gtgcgcaagt ggcggcgatg atacaggcag
     2581 acctcttggt gctgctgacc gacatagacg gtctttacac gggcaacccg aacagcaatc
     2641 ccgatgccgt acggctggac aaaatcgaac acatcaacca tgaaatcatc gaaatggcgg
     2701 gcggatcggg ttcggcaaac ggcacgggcg gtatgctgac taaaatcaaa gcggcgacga
     2761 ttgcgaccga gtccggcgta ccggtctata tctgttcctc gctcaaaccc gatgcacttg
     2821 ccgaagcggc agataatcag gcggacggct cgtttttcgt cccccgtgcc aaaggtttgc
     2881 ggacgcagaa gcaatggctg gcgttctatt ccgaaagcag gggcggcgtt tatgtggacg
     2941 aaggtgcgga acacgctttg tccgaacagg gaaaaagcct gctgatgtcg ggcattgccg
     3001 gaatcgaagg gcatttttcc cgtatggaca ccgtaaccgt gtacagcaag gcaaccaaac
     3061 agcctttggg caaagggcga gtcctgttcg gctctgccgc cgccgaagac ctgctcaaat
     3121 tgcgtaaggc gaaaggcgtg ttcatccatc gggacgactg gatttccatc acgcccgaaa
     3181 tacgcctgct tctgaccgaa ttttagaaaa gaaaacccat gtcaaacaca caaaaacagc
     3241 ttgcccttgc caaagcggca aaaaaatccg tcaacacggc ggatacggaa gaaaaaaacc
     3301 gcgcgctgtt tgctatggcg gacagcttgg aagcggcggc ggcagatatt ttggcggcaa
     3361 accgtcaaga cttggaagcc gcggcaggca aaattcccga aagcatgact gaccgccttt
     3421 tgttggacgg caaacgcatt tgcgcgatgg cggacggcat cagggcggtt gccgcactgc
     3481 ccgaccccgt gggcgaaata ctggaaacct cggctctgcc caacggcttg gaaatcgtca
     3541 aaaagcgtgt ggcgatgggc gttatcggca ttatttacga aagccgcccg aacgttacgt
     3601 ccgatgcggc ggctttggca ctgaaaagcg gcagcgcggt cgtactccgc agcggcaaag
     3661 atgcattcca atccgcacgc gccatcgttg ccgcactcaa agccggtttg gagcaaaccc
     3721 gcatcgaccc cgacgcgctc cagttgattg aagacacagg gcgtgagggc agttacgaaa
     3781 tgatgagggc gaaagattat ctagacctgc tgattccgcg cggcggggcg gggctgatac
     3841 gggcggtggt tgaaaatgcc gtcgtgccgg tcattgaaac gggaacgggc attgtccaca
     3901 tttatatcga caaggacgcg gattgggaca aggcgctccg tatcgtgtac aacgccaaaa
     3961 ccagccgtcc gtccgtgtgc aactcgatgg aagtgctgct ggtacatgaa gacattgctg
     4021 ccgacttcct gcccaagctc gaacggctgt tggttcgcga ccgcatagaa gccggactgc
     4081 cgcccgtccg cttccgtttg gatccgcagg cggcgcggca tatcggcggc gaagcggcgg
     4141 gtgcagacga tttcgatacc gagtttttag actacatcct cgctgtgaaa accgtcgctt
     4201 cggtcgaaga ggcggtctgg cacatcgaaa cccacagcac acaccattca gacggcatcg
     4261 ttaccgaaaa ccgccacgct gcggactatt tcacgactca tatcgattct gccgccgtgt
     4321 atgtcaacgc gtccacgcgc tttaccgacg gcggcgaatt cggcttgggt tgcgaaatgg
     4381 gcatctccac gcaaaaactc cacgcccggg gcccgatggg tttgaaagag ctgacgagtt
     4441 acaaatacat cgtacaaggc acgggacagg tcagggaata atccgaattc aaatgtctga
     4501 tatagtggat taactttaaa cc
//
LOCUS       DAXHRP010000159         4445 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.159, whole genome shotgun sequence.
ACCESSION   DAXHRP010000159 DAXHRP010000000
VERSION     DAXHRP010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.159"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(63..1205)
                     /locus_tag="ACFM72_001839"
     CDS             complement(63..1205)
                     /locus_tag="ACFM72_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HFC6258366.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1254..1676)
                     /locus_tag="ACFM72_001840"
     CDS             complement(1254..1676)
                     /locus_tag="ACFM72_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258367.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAVQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1669..2478)
                     /locus_tag="ACFM72_001841"
     CDS             complement(1669..2478)
                     /locus_tag="ACFM72_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC6258368.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQAWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCNDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2560..2937)
                     /gene="acpS"
                     /locus_tag="ACFM72_001842"
     CDS             complement(2560..2937)
                     /gene="acpS"
                     /locus_tag="ACFM72_001842"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HFC6258369.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3137..3904)
                     /locus_tag="ACFM72_001843"
     CDS             complement(3137..3904)
                     /locus_tag="ACFM72_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC6258370.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3914..>4445)
                     /locus_tag="ACFM72_001844"
     CDS             complement(3914..>4445)
                     /locus_tag="ACFM72_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HFC6258371.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVNVIKNASDIQEFSAQDDGLIIIDNVNGLHART
                     DYTDKNRHYIRARITV"
BASE COUNT         1103 a         1111 c         1074 g         1157 t
ORIGIN      
        1 tcggccggat attaaaaaaa gccgtctgaa catttttcag acggcatttt tgtacacttt
       61 cctcaacggt tcgatccctg caccatatca atcaggaaca ggcggcaatc gaggttgccg
      121 ttataaagcg gaattttgcg ttttggcgac aggcgcatga atttgggcat ttcccgatct
      181 ccggtaaaca ttgccgccaa ccagcctgcg taatatttct tcaaccacgt ccccaactgc
      241 ggataaagcg cctgcaaggc gcggacttcc tcaaggcgca cgccgtaggg cggattggac
      301 accataatgc cgttttcgcc gttcggacgg acggattgcg cgtcggcaac gctgaaggaa
      361 acgatgtcgt ccaccccggc actgcgtgcg ttggccaatg ccgtctgaat gatgcggcgg
      421 tcgctgtcgc tgcccgaaat cggtgcaaaa gccggtttaa cctgcgcttc ggcacggcgg
      481 cgcaaatccg accacagcgt tttatcgaaa ttttgcagtt tttcaaaacc gaaacggcgc
      541 atcatacccg gcgcgcggcg ggcggcaatc caagcggctt cgatagcaat cgtgccgctg
      601 ccgcaaaacg ggtcttgaaa cggctgcgtg ccgtcgtagc ctgccgagag cagcaatccg
      661 gcggcaaggt tttcgcgcag cggggcttcg ccggtatcga gacggtagcc gcgtttgaac
      721 agggcttcgc ccgaagtgtc gatgaagatt tcgacattgc gttcgtccaa aaaggcgtgg
      781 atgcgaacat cgggcgcggc tttgtccacg ctcggacgtg cgtcgtaaat gtcgcggaaa
      841 gcgtcgcaga cggcatcttt gacggtcagt ccgacaaatt ggatgctctt aacgttggca
      901 cgctttgcct cgactttgac tttgaacgtc tgctgtaaag taaaccaatt aaaccagttg
      961 atatttttgg cgagtttgta gatgtcgcgc tcattgcggt atgtcccttt ggtcaggcgc
     1021 agcaggatac ggctggcagt acgcgaatgc aggttggcgg cgtaaacctg ttccaatccg
     1081 ccccggcagg aaacgccgcc gtcaaacact tgtacatcgg tacagccgag gctttcgagt
     1141 tcttgagata aaacggtctc caagccgcgc gggcaggtgg cgaaaagtgt atataaagta
     1201 ttcataacgt gtcctttccg gacggatgtt ccggcaatgg cggattgaaa ggtttattcg
     1261 gcggtaaatg ccgtctgaaa tgtccgactg ccgattgtaa tgtccgccgt aaaatcgcgc
     1321 ctgccttcga cacagatggg caggcggatg cgtactgcct gccaagtccc cgacggttgc
     1381 cgctcgaaca tatagcggtt gaaacccata tccatatttt tcatactgaa gctgatgctg
     1441 acctgttccg tgccggcggg cgcgtgttcg atataaatat caaacggttt tttggttgaa
     1501 acggcggcgg cgcggacgcg gcttccgtcc ggcagcgtgc aaccctcggt caaatcgcat
     1561 tgcaccgcca cagcttgcgg ctgctgcgcc tgccaccatt gcaacaaaac gagcttgacg
     1621 gcggcaaagg caatcagcag cagtgcggca agcagtaatt tacggttttt attcatgatt
     1681 cttccctatt gtttcatccc ttaccaccac gtgcgccccc aatccgagcc atagttttcc
     1741 ataacgtgca accgtctgtc cgtttgctgc aagtacgagc ggcacggata cgccctgccg
     1801 cagggcttct gccgcctctt gtgcctgaac atcattgcac acgcgccaca cgacaacatc
     1861 cgcgcccttt tcctgcgcct gccgccattg ttcgcgggtc tgcaccatca tccacacgct
     1921 gtcggcgtgt tcgggtctgt cctgccattg cgccgcctcc atcaaaacgt tcgcaccgct
     1981 tccctctgcc gaacccaaag gcaggacgcg gtacgcgccc atactgtttt ctccgtgcaa
     2041 acccgttttc aggctgccgt acaaacggcg cgggacggac agcgaacgca aaagcgcgcc
     2101 gttggcgggc agcatggggg caacggtaaa atcacccgct ttctgccacg accatgcctg
     2161 tccttcgcgc gattgcggtt cgcccgtcca ttggccgggg tttacccata ggaatttcag
     2221 gcagacgcgg gcgtgttcgt aggaatggat tttggtcagc caaggcgtgg cggcgaggat
     2281 gcggatgccg agttcttctt caaactcgcg ttgcaaggct tggaagtcgg tttcgcccgc
     2341 ttcgaccttg ccgccggcaa attcccaata tccggcatag ggtttgcctt cggggcgcga
     2401 gctgagcagg tagttgccgt ctgaatcgag caggatgccg gcaacgacgc ggataagggg
     2461 tcgggtgtct tgaatcatgg cgggtacgcg gttggtcggt cggagtgcaa atgagggacg
     2521 agcaatgccg tcaacgggtt tgccgcattt cagacggcat tatttttcgg caacgacaaa
     2581 cgccaatacg gtgtcttctt cgtcgctcat gctgaggctg acgcggctga tgccttgttc
     2641 ctccagccat ttggacaggg cggggccgta gaaaaattcg ggcttgccca atgcgtcatg
     2701 cccgatgccg atgttgcgga aggaaaccgc gccgcgtatg cccgtgccga cggctttggc
     2761 gaaggcttct ttggcggcaa agcgtttggc gaggtagttg acgggtttgc ccgcttgcgg
     2821 aaattcaagc agctcttccg gagtgaggat gcgcccggca aacgcctgtc cgaatttttt
     2881 gtttaagcgg atgatgcgct tgagggaaac aatgtctgtg ccgatgccgt aaatcatatt
     2941 tgcgctcctt cgcccttggt tgcgggtagt gatgaatgtg atgatgaatg ccgtcaattt
     3001 cttggggcgt taaaatggcg tgaatatcca cttttggggt tttgtcggta acaattttca
     3061 ctgtaacctt ttgcatttga aattctaaaa catcgtgcca attatttaat aaggagttaa
     3121 ggcatttaat aatgaattaa agtttgatta aacccgaatg cccgattttc agagccaata
     3181 ccaataaaac aataaaaatt aacattttaa aaaaatttgg gctaatctta gtccttaacc
     3241 gaattccaac atacaatcca ataacagaca atacggacag taaaaatatt aaaccgtatt
     3301 cactcttatt taataaccaa tactggtctc ttagcatata tatttgaaca attttcgcca
     3361 aaagatagca tagattgctt gattttacga tacgattttt attttctgtt tcgctaagca
     3421 aaaatattaa caatatggga gacatggcat tggttgaacc gccgatgatg cctgccaaaa
     3481 acccaaaaag aaccatattc ttattattgg caactacttg aatatttttt gcttttgcac
     3541 atacatttaa aataccattg acagaataat acaatgtaat gattgccatc agtaaaagca
     3601 gccaagacac tggaagtatc aaaagcaact tcacccccaa aatgctgcca acgacgctgc
     3661 cgatagcaag caatttatag gtttttaaat aataaacaat ctcttgccaa aaaccctttt
     3721 tgttattgct gcatagaacc aacaagctca ttaacaggct tggtaatgcc accaaggcaa
     3781 caaccttaga caatggcatg ataaaagcca atgcggttgt accgagcatc ggaaatccca
     3841 tgcctgtaat tccgtgcagt attgcggcag caacaaaaac gatagattgc attatttctt
     3901 gcataaccgt cctttataca gtaattcttg ctctaatata atgcctgttt ttatccgtat
     3961 aatcagttct ggcatgcaag ccattgacat tgtcaataat aatcaaacca tcatcttgtg
     4021 cagaaaattc ttgaatatca ctcgcatttt ttataacatt tacaagataa tcaagtgcaa
     4081 gtaccatttc ctttgatact ttatttctat tttcttcaat acctttatag atacaatcac
     4141 ttctaaatct aatcatttga gtattgaccg ataagatatt accccatctc acaccttgtt
     4201 ttttatcaaa tgatgctggt gttttaaatg gatataaatt gcccgttaat gtttttaagt
     4261 gttttttacc ggtttctgtt ttagataact gattgacaat atctgatgaa cttaaaaata
     4321 gggaattacc tccatcattg gctgatttta ctacatacat aaccaaataa ctttccgggt
     4381 tttcactaaa agatgaatca ctatgaagtg gacattctcc aacatcttcc gagaaagtta
     4441 tatca
//
LOCUS       DAXHRP010000160         4417 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.160, whole genome shotgun sequence.
ACCESSION   DAXHRP010000160 DAXHRP010000000
VERSION     DAXHRP010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.160"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            37..460
                     /locus_tag="ACFM72_001845"
                     /pseudo
     CDS             37..460
                     /locus_tag="ACFM72_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            566..1129
                     /gene="pgsA"
                     /locus_tag="ACFM72_001846"
     CDS             566..1129
                     /gene="pgsA"
                     /locus_tag="ACFM72_001846"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HFC6258372.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1209..1284
                     /locus_tag="ACFM72_001847"
     tRNA            1209..1284
                     /locus_tag="ACFM72_001847"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1242..1244,aa:Gly,seq:gcc)
     gene            1310..1385
                     /locus_tag="ACFM72_001848"
     tRNA            1310..1385
                     /locus_tag="ACFM72_001848"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1343..1345,aa:Gly,seq:gcc)
     gene            1409..1484
                     /locus_tag="ACFM72_001849"
     tRNA            1409..1484
                     /locus_tag="ACFM72_001849"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1442..1444,aa:Gly,seq:gcc)
     gene            1506..1581
                     /locus_tag="ACFM72_001850"
     tRNA            1506..1581
                     /locus_tag="ACFM72_001850"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1539..1541,aa:Gly,seq:gcc)
     gene            1607..1680
                     /locus_tag="ACFM72_001851"
     tRNA            1607..1680
                     /locus_tag="ACFM72_001851"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1639..1641,aa:Cys,seq:gca)
     gene            1783..1872
                     /locus_tag="ACFM72_001852"
     tRNA            1783..1872
                     /locus_tag="ACFM72_001852"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1817..1819,aa:Leu,seq:taa)
     gene            1976..3028
                     /gene="sohB"
                     /locus_tag="ACFM72_001853"
     CDS             1976..3028
                     /gene="sohB"
                     /locus_tag="ACFM72_001853"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HFC6258373.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3079..3942)
                     /locus_tag="ACFM72_001854"
     CDS             complement(3079..3942)
                     /locus_tag="ACFM72_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HFC6258374.1"
                     /translation="MENVETHSQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVI
                     AGQAWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVT
                     ARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVDILALFLWLLPR
                     FAAISENLYFRLKNSLERDNHFIRKGDRRQLDRHYGLLARLRVLISNREAFGYLCVGT
                     AMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRI
                     EWSKRNIKAGT"
     gene            complement(3955..4386)
                     /locus_tag="ACFM72_001855"
     CDS             complement(3955..4386)
                     /locus_tag="ACFM72_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HFC6258375.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTE
                     SAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1091 a         1051 c         1154 g         1121 t
ORIGIN      
        1 cgctgggtat ggtttgccgc cataagctgt ctgctgttgt ccgccgtttt tattgcacct
       61 tacctgacgg catttcacga acaagaaaaa acattcgaat atgcggaatt gaccgttacc
      121 gcccccaacc gcagcggacg ggcaatcaaa ctggatgcag acgggcagca ttaccggctt
      181 tcctgctatg ggttcgacag tttgtgcaca ggcggcaata tcggcagaac catcagggcg
      241 gagcaggtta gagccgtttt aagcgaaacc gtcggcaaag gttttttaaa cggcgttctg
      301 ttggaatacc gcaacagtgg cagtgtctat aagcaataaa gattttgccc gcacggaaga
      361 ccgccttgtc gaagtgttgg cacaacctgc cgttttctgc ctgaaactgg gtattttgct
      421 tttattgccc gccattttcc tgcgtttgaa aagaatgtga aaacagattg gcggggcggg
      481 ggaatgccca tgcagcaatt ttacgttttg ggttatgagg ataaccgtta taatcacaac
      541 tttacagtct gcacagagaa aaccgatgcc ttggaatctc cctatcttcc tcacatggtt
      601 gagggtcttg ctcattcctg tcatgacagc ccttttttac ctgccttttc cgtggttcgc
      661 ggaggaaacg attaatctca ccgccgccgt catttttgcc gttgccgcct taaccgactg
      721 gtttgacgga tttttggcaa gactgtggaa acagacttcc gatttcggcg ccttcctcga
      781 tcccgtcgcc gacaagctga tggttgccgt atcgctactt ttactggtca aactcgaccg
      841 gacctatgtt ttgtttgcca tgatcattat cggcagggaa attaccattt ccgcattgcg
      901 cgaatggatg gcgcaaatgg gcaaaaggaa cagcgttgcc gtcgccaccg tcggtaagtt
      961 caaaaccgcc gcgcaaatgc tggcaatttt cctgctgctg ctgaatattc ccgattttta
     1021 cggatttaat cttgttgtta tcggcaatgt attgatgttt atcgcatctt tgctgacagt
     1081 ctggtcgatg ctgtattatc tgaaaatggc gtggaaagaa atcgcctgaa aaaaacataa
     1141 aaatagcttg acggcaaaaa cagaatccat aataattgcg tctcttcgat gttggagaat
     1201 gaaatcgggc gggaatagct cagttggtag agcgcaacct tgccaaggtt gaggtcgcga
     1261 gttcgagact cgtttcccgc tccaaaaatt tcattttccc acaatcattg cgggaatagc
     1321 tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg agttcgagac tcgtttcccg
     1381 ctccaagttt tatttcaaac atatcaacgc gggaatagct cagttggtag agcgcaacct
     1441 tgccaaggtt gaggtcgcga gttcgagact cgttttccgc tccaaaaacc gatatgtttg
     1501 aacgcgcggg aatagctcag ttggtagagc gcaaccttgc caaggttgag gtcgcgagtt
     1561 cgagactcgt ttcccgctcc aagtttttta gataagccag ttttagggcg agatagcaaa
     1621 gtggttatgc agcggattgc aaatccgtct acgccggttc gattccgact ctcgcctcca
     1681 ttatcgtact acggcggggt ggcagagtgt ttatgctatg aggagtgcaa tcttcatata
     1741 ggccggttaa aatccgcgcc cccgcctcca cctttcacaa atgcccgggt ggtgaaatag
     1801 gtagacacaa cggacttaaa atccgtcggg actaaacatc ccgtgccggt tcgattccgg
     1861 ctccgggcac caagctgaaa atgacaatgc cgctccaagc ggttattttt ttatctgtcg
     1921 gacggtgatg gacaatattg acatgttcat gcctgaacaa gaggaaatcc aatcaatgtg
     1981 gaaagaaatt ttactgaatt acggtatttt cctgctcgaa ctgcttaccg tgttcggcgc
     2041 aattgcgctg attgtgttgg ctatcgtaca gagtaagaaa cagtcggaaa gcggcagtgt
     2101 cgtactgacg gatttttcgg aaaattataa aaaacagcgg caatcgtttg aagcattctt
     2161 tttaagcggg gaagaggcaa aacatcagga aaaagaggaa aagaaaaagg aaaaggcgga
     2221 agccaaagca gagaaaaagc gtttgaagga gggtggggag aaatcttccg aaacgcaaaa
     2281 atcccgcctt tttgtgttgg attttgacgg cgatttgtat gcacacgccg tagaatcctt
     2341 gcgtcatgag attacggcgg tgcttttgat tgccaagcct gaagatgagg ttctgcttag
     2401 attggaaagt ccgggcggcg tggttcacgg ttacggtttg gcggcttcgc agcttaggcg
     2461 tttgcgcgaa cgcaatattc cgctgaccgt cgccgtcgat aaggtggcgg cgagcggtgg
     2521 ttatatgatg gcgtgtgtgg cggataaaat tgtttccgct ccgtttgcga ttgtcggttc
     2581 ggtgggtgtt gtagcggaag taccgaatat ccaccgcctg ttgaaaaaac atgatattga
     2641 tgtggatgtg atgacggcgg gcgaatttaa gcgcacggtt acttttatgg gtgaaaatac
     2701 ggaaaagggc aaacagaaat tccgacagga actggaggaa acgcatcagt tgttcaagca
     2761 gtttgtcagc gagaaccgcc ctcaattgga tattgaggaa gtggcaacgg gcgagcattg
     2821 gttcggtcgg caggcgttgg cgttgaactt gattgacgag atttcgacca gtgatgattt
     2881 gttgttgaaa gcgtttgaaa acaaacaggt tatcgaagtg aaatatcagg agaagcaaag
     2941 cctgatccag cgcattggtt tgcaggcgga agcttctgtt gaaaagttgt ttgccaaact
     3001 tgtcaaccgg cgggcggatg tgatgtagtt tgccgaacgg atggaaatgc cgtctgaagc
     3061 gtgttcagac ggcatttttc aagttccggc tttgatgttc cgtttcgacc actctatccg
     3121 ttgtccgatg tctttcaaat tggaatattg ttcgaccaat cgcggcacgt cgtccaaact
     3181 catggcaaac atccacagat aagtgccgac cgaatagaca tgccccgcgc tgctgtagcc
     3241 tttgagcgtc atcatcacaa aagcaaagcc gaacaaaata cccatcgccg tgccgacgca
     3301 gagatagccg aaggcttcgc ggttggaaat cagcacacgc aggcgcgcaa gcagtccgta
     3361 atggcggtcc agctgccgcc ggtcgccttt tcggataaag tggttgtcgc gttccaagct
     3421 gttcttcagg cggaaataca ggttttcgct gatggcggca aaacgtggca aaagccataa
     3481 aaacaacgca agtatgtcca ccgccgacac gccgacccaa aattccagca ccagcagcat
     3541 gatgcacgcg ccgaatatgg atacgacgga tgtcgcggca atcggcaggt gttcttcaaa
     3601 aaagctgaca aactcacgcg acagggcaac ccgcgcagtt accgccgaat gcgggacttg
     3661 ccgctgccgc tgttccaaca caaccggcac ggcgatttcg gtataaatcc gcgtaaacgt
     3721 gcgcgtatcg gcaatccgcc gcgccgcacc gaccagccac atcaaaagca caaccaaagc
     3781 gtacagcaac gcctgccacg cctgccccgc aatcacggca ttaatcgccc agccgccaaa
     3841 caccggatac accagcatca aaaggttttc cagtccgacc agaaaaaatg tgccaatcaa
     3901 tcgcttgcgg tggttttggc tatgtgtttc aacattttcc acatatttgc ccccctattt
     3961 tttattttcc gagattgttt tttccatcac ttcagccagt gcatccaaat cggcaaacag
     4021 ccgagttgtg cgcttgtcgc cgaatgtggc aaatactttg tcgctgaatt cctgcgcgct
     4081 ttctgttaaa ggtgcggcat aggctttgcc tgtttcggtc aacgacagca accgtttgcg
     4141 ccggtcctgt tcgccttcct gccattcaat caacccttgt ccggcaaggg ttttgcatac
     4201 gcctgaaacg gtctgtttgg gcaggctcca cttttcgccg atatgctttt gcgtgcggct
     4261 gccttcggtt gccagggtat aaagtacggc aaagaggttg taattcagat cctgctgccc
     4321 gatccatttg tcgaagacat tgcaaatcag gttgatacgg gtgccaagtt ggtcgagttg
     4381 gttcataatt ggtcttgata ttgactaaat ttgtgcg
//
LOCUS       DAXHRP010000161         4371 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.161, whole genome shotgun sequence.
ACCESSION   DAXHRP010000161 DAXHRP010000000
VERSION     DAXHRP010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.161"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(69..2045)
                     /locus_tag="ACFM72_001856"
     CDS             complement(69..2045)
                     /locus_tag="ACFM72_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HFC6258376.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLKGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="ACFM72_001857"
     CDS             2194..3033
                     /locus_tag="ACFM72_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HFC6258377.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GATVVRDLAALLGKPLVAPAKTQAKALARIDESACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3232..4263
                     /gene="gap"
                     /locus_tag="ACFM72_001858"
     CDS             3232..4263
                     /gene="gap"
                     /locus_tag="ACFM72_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC6258378.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1099 a         1474 c         1016 g          782 t
ORIGIN      
        1 tgcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgcctttc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccatttt cgccgaatcc tgcctcatca tcactaccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca ttgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg taaccaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaacac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccgatgc tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggcc gtccgaacag gaaaatacag aaaaatgcca tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggcgc aaccgtcgtc
     2341 cgcgaccttg ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga atccgcctgt atcggctgca ccgcctgtat ccgcgcctgc
     2461 cctgccgatg ccattatggg cgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgcgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat acctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ccgacatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa ccctcaacaa aggaacgaac catgggcatc
     3241 aaagtcgcca tcaacggcta cggacgcatc ggccgccagg ttttgcgcgc catctacgat
     3301 tatcagattc aagaccaact ccaaatcgtc gccgtcaacg ccagcggcag ccttgaaacc
     3361 aacgcccacc tcaccaaatt cgacaccgtg cacggacgct ttgaagccga cgtatcccac
     3421 gacggcggca acctcatcgt caacggcgac aaaatcccct tcttctcgac ccgcaaccct
     3481 gccgaactgc cgtggaaaga actcggtgtc gatttggtca tggaatgcac cggcgcgttc
     3541 accagcaaag aaaaagccaa agttcatctg gaaagcggcg caaaaaaagt cctcatttcc
     3601 gcaccgggcg gcgacgatgt cgatgcaacc gtcgtgtacg gcgtgaacga cagcgtcctg
     3661 accgccgaca tgaccgtcgt ttccaacgct tcctgcacca ccaactgcct ctcgccggtt
     3721 gccaaagtgt tgagcgaaag cgtcggcatc gtcaaaggcg cgatgaccac catccacgcg
     3781 ctgaccaacg accaaaccgt taccgacgtg cgccacaaag acctgcgccg cgcccgcagc
     3841 ggcgtggaaa acatgattcc gaccaaaacc ggcgcggcaa aagccgtcgg tttggtactg
     3901 cccgaattga aaggcaggct cgacgggctt gccatccgcg tgccgaccgt caacgtatca
     3961 ttggtagatt tgagcttcca agccgcgcgc gacacgacag tcgaagaaat caacgcactg
     4021 atgaaagccg cctcggaagc aggcgcactc aaaggcgttt tgggctacaa caccctgccc
     4081 ttggtttcca tggacttcaa ccacaccacc gaagccagcc acttcgacgc aacgctgacc
     4141 aaagttgttg acggcaacat ggtcaaagtg ttcgcttggt atgacaacga atggggcttc
     4201 agctgccaaa tgctgaacac cgcacgccgt atgttcggac ttgaagtgcg cccgctcaaa
     4261 taagcaataa accgtcaaac aaaatgccgt ctgaaacccg atgttttcaa gttccagacg
     4321 gcatttttca tttttcaccg tgattttacc cggctgtcgt catttctaat t
//
LOCUS       DAXHRP010000162         4350 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.162, whole genome shotgun sequence.
ACCESSION   DAXHRP010000162 DAXHRP010000000
VERSION     DAXHRP010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.162"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            26..2041
                     /locus_tag="ACFM72_001859"
     CDS             26..2041
                     /locus_tag="ACFM72_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HFC6258379.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALS
                     DGILAQLQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPADCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGEIGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFTDGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
     gene            complement(2155..3111)
                     /locus_tag="ACFM72_001860"
     CDS             complement(2155..3111)
                     /locus_tag="ACFM72_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC6258380.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRSFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQYEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            3347..4312
                     /locus_tag="ACFM72_001861"
     CDS             3347..4312
                     /locus_tag="ACFM72_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC6258381.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
BASE COUNT          919 a         1201 c         1362 g          868 t
ORIGIN      
        1 acctgcccaa ccctcaagga ccccgatgaa atcctacccc gacccctacc gccattttga
       61 aaacctcgat tccgccgaaa cgcaaaactt cgctgctgaa gcgaatgccg aaacgcgcgc
      121 gcgtttttta gaaaacgaca aggcgcgcgc gctttcagac ggcattttgg cgcagttgca
      181 ggacacgcgg cagattccgt tttgtcagga acaccgcgcg cggatgtacc atttccatca
      241 ggacgcagaa tatccgaagg gcgtgtaccg cgtgtgcacg gcggcgacgt accgttcggg
      301 ctatcccgag tggaaaatcc tgttttcggt ggcggatttc gacgaattgc tcggtgacga
      361 tgtatatcta ggcggcgtgt cgcacctggt ggaacagccc aaccgcgcgt tgttaacact
      421 gagcaaatcg ggcggcgata ccgcgtacac gctggaagtg gatttggaag caggggagtt
      481 ggtagaaggc ggttttcact ttccggcagg caaaaaccat gtgtcgtggc gcgatgaaaa
      541 cagcgtgtgg gtgtgtccgg cctgggacga gcggcagttg accgaatcgg gctatccgcg
      601 cgaggtgtgg ctggtggaac gcggcaaaag tttcgaggaa agcctgccgg tgtaccaaat
      661 cggcgaagac gggatgatgg tgaacgcgtg gcgttacctc gatccgcagg gttcgccgat
      721 tgatttgatt gaagcgtctg acggttttta caccaaaacc tatttgcagg tgtcggccga
      781 aggcgaggcg aaaccgttaa acctgcctgc tgattgcgat gtggtcggct atctggcggg
      841 gcatcttttg ctgacgctgc gcaaggactg gcaccgcgcg aaccaaagct atccgagcgg
      901 cgcgctggta gcggtgaaac tgaatcgcgg cgaaatcggg gcggcgcagc ttttgtttgc
      961 gcctgatgaa acgcaggcat tggaaagcgt ggaaacgacc aagcgttttg tcgtggcgag
     1021 tctgctggaa aacgtacaag gccgtctgaa agcgtggcgt tttaccgacg gcaaatggca
     1081 ggaagccgaa ctgccgcgcc tgccctcggg cgcgttggaa atgaccgacc aaccgtgggg
     1141 tggcgacgtg gtttaccttg ccgccagcga tttcaccacg ccgctgacgc tgtttgcgct
     1201 ggatttgaac gtgatggaac tgaccgtcat gcgccgtcag ccgcagcagt tcgattcaga
     1261 cggcatcaac gtgcagcagt tttggacgac ttcagctgac ggcgaacgca tcccttattt
     1321 ccacgtcggc aaaaacgccg cgcccgacac gccgacgctg gtttatgcct acggcggttt
     1381 cggcgtaccc gagctgccgc attatctggg cagcatcggc aaatactggc tggaagaggg
     1441 caacgccttc gtgttggcga acatacgcgg cggcggcgag ttcggcccgc gctggcatca
     1501 ggcggcgcag ggaatcagca aacacaaaag cgtcgatgat ttgcttgccg tcgtgcgcga
     1561 tttgtccgag cgcggcatca gttcgcccca acacatcggt ttgcagggcg gcagcaacgg
     1621 cggcctgatt accgccgccg ccttcgtgcg cgaaccgcaa agcataggcg cactggtgtg
     1681 cgaagtgccg ctgaccgaca tgatccgtta tccgctgctc tccgccggtt caagctggac
     1741 agacgaatac ggcaatccgc aaaaatacga agtctgcaaa cgccggttgg gcgaattgtc
     1801 gccgtatcac aatctttcag acggcatcga ttatccgccc gcgctcatca ccaccagcct
     1861 cagcgacgac cgcgtccatc ccgcccacgc gctcaagttt tacgccaaac tgcgcgaaac
     1921 ctcgccgcaa tcttggctct actcgcctga cggcggcggc cataccggca acggcacgca
     1981 gcgcgaagcc gccgacgaac tcgcctgcgt gttgctgttt ttgaaagagt ttttgggcta
     2041 agggcgggga gcggcactgc cgccgcgaat gaaaaaaggt cgtctgaaac tgctttttca
     2101 gacgaccttt tttaatggtt gtttcaaatc aaaatatcta tgccgccggc cccatcagca
     2161 cttcttcaca tccgaaggca aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc
     2221 cgcgtggcgg tagccgcaaa agtgcatggc ggcttggacg gtgctgccgg attcgatgag
     2281 ggcgagcgcg tgttccagcc gcaggcggcg caggcatccg gcgacggttt cgccggtttg
     2341 cgctttgaaa tagcgtttca ggtagcattc gttcagtccg acgcggcggg cgatttcggc
     2401 gatggtcagc ggacgggcga attcgtattg caggatgtcg gcggcttcgt ctatgcgccg
     2461 acggcggtaa ccgttgtcgt ggcggcggaa ggtgaagcgc aataatcggg cggagagttc
     2521 cagcgcggcg gcttcgtcgg caagcaggcc gaagccgtcc gattcgaacg agcgttgcag
     2581 cagtgggcag gccgccgccg tcagtgccgc tgcgttttgc gccagccgtt gcagggcgaa
     2641 tcggcctatc gtttgcggcg aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg
     2701 gcgcagtttt tccagcgaaa aatccaaatg cagcgcgcac atgccgctgt tgtcgggcag
     2761 cagggtttcg gatacgtccg ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg
     2821 gcggtattcc ctgccgccca tttgtaaccg gttctgcccc gacaccatga cgaacaaggc
     2881 gcagttgtgg ctgaaattgt ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat
     2941 ccgcgacaag gtgatgcccg agtcgaagcg gttgatgcac atttccagat gcaaaccggg
     3001 ctgttttgcc tgcgcaatga gcgcgctgtc ggaacagccg tccaacgccc agccggattt
     3061 atcggagcgg acataggttt ggtactggcg gtagatggcg gcggtgttca tgattggata
     3121 ggaacgagtt gtctaacaaa tgaattaaat aggaattatt accaataatc aagcgcaggg
     3181 attggttgaa acggaaaagg tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg
     3241 gaatttgttt tgccgtatcg ggaattttgc gttttgcggc gtggtttctg caggttgttt
     3301 gcttaataat aaacattctt attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt
     3361 ttattgggca gcctgcgccg tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa
     3421 aactgtatcc gccgcatccg catctgccgc cacactgacc gtgccgaccg cgcggggcga
     3481 tgccgttgtg ccgaagaatc ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac
     3541 gctgaccgaa ttgggcgtga atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt
     3601 gcagcctgca tttgacaagg cggcaacggt ggggacgctg ttcgagcccg attacgaagc
     3661 cctgcaccgc tacaatcctc agcttgtcat taccggcggg ccgggcgcgg aagcatatga
     3721 acagttggcg aaaaacgcga ccaccataga tctgacggtg gacaacggca atatccgcac
     3781 cagcggcgaa aagcagatgg agaccttggc gcggattttc ggcaaggaag cgcgcgcggc
     3841 ggaattgaag gcgcagattg acgcgctgtt cgcccaaacg cgcgaagccg ccaaaggcaa
     3901 aggacgcggg ctggtgctgt cggttacggg taacaaggtg tccgccttcg gcacgcagtc
     3961 gcggttggca agttggatac acggcgacat cggcctaccg cctgtagacg aatctttacg
     4021 caacgagggg cacgggcagc ctgtttcctt cgaatacatc aaagagaaaa accccgattg
     4081 gattttcatc atcgaccgta ccgccgccat cgggcaggaa gggccggcgg ctgtcgaagt
     4141 attggataac gcgctggtac gcggcacgaa cgcttggaag cgcaagcaaa tcatcgtcat
     4201 gcctgccgcg aactacattg tcgcgggcgg ctcgcggcag ttgattcagg cggcggagca
     4261 gttgaaggag gcgtttgaaa aggcagaacc cgttgcggcg gggaaagagt agggagtcgt
     4321 ctgaaaacgg agtttccgaa ggaagcgggg
//
LOCUS       DAXHRP010000163         4263 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.163, whole genome shotgun sequence.
ACCESSION   DAXHRP010000163 DAXHRP010000000
VERSION     DAXHRP010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.163"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            537..2264
                     /gene="ilvB"
                     /locus_tag="ACFM72_001862"
     CDS             537..2264
                     /gene="ilvB"
                     /locus_tag="ACFM72_001862"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HFC6258382.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKVDIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSQDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADGKA"
     gene            2275..2766
                     /gene="ilvN"
                     /locus_tag="ACFM72_001863"
     CDS             2275..2766
                     /gene="ilvN"
                     /locus_tag="ACFM72_001863"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HFC6258383.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2833..3126
                     /locus_tag="ACFM72_001864"
     CDS             2833..3126
                     /locus_tag="ACFM72_001864"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HFC6258384.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3206..4219
                     /gene="ilvC"
                     /locus_tag="ACFM72_001865"
     CDS             3206..4219
                     /gene="ilvC"
                     /locus_tag="ACFM72_001865"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HFC6258385.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1111 a         1018 c         1075 g         1059 t
ORIGIN      
        1 tcaatatatt aagtcgttgt tagccctctt ggttctgtca atgccgtcca atacagtccg
       61 gtgcaatgag ccattttcag gaagtatggt tgggaatatt tttgatatat caaaaataaa
      121 atcaagttca atcaatatcc cgagtcttta ttgggatgaa accctgtaaa ttttacaatt
      181 cttgatatcg aagaagggtt tttcacatct gcccctccta cacaaactgt caacaatttc
      241 catctttcaa aaaaggtact cctgatttta ttcttttaaa atcaatcaat aatttctctg
      301 ctttcaaaaa atattaaaag atgaaagatt tttcttgatt gaactgtcgg tttgcgttat
      361 cgtttctact ctttttcaca aactctgtgt tcctttccaa ttgattggat aatccgtctg
      421 ttgccgtgtt cccccaatgc gcgtacccta aatcgctgct tggtggaatt gcattacagg
      481 tgctgtggca aagcggtttg tccctattgg tttgaaaccg tataaaagag gtcgttatgc
      541 agttatcagg cgcgcaaatc atagtgcaga gtctcaaagc cgaaggtgtc gagtacgttt
      601 tcggttatcc cggcggtgcg gttatcgaaa tctacgatgc ccttttccaa ctcaataaat
      661 tcaagcacat tctgacccgt cacgagcagg cggcagtaca cgcggcagat gcgtatgcgc
      721 gcgtcagcgg taaggtgggc gtggcattgg ttacatccgg cccgggcgtt accaatgcac
      781 tgaccggtat tgctactgcc tatacggatt cgattccgat ggtggtcatc agcgggcagg
      841 taggcaattc cctgattggt acggatgcgt tccaagaagt tgatacggtg ggtattaccc
      901 gtccgtgcgt caaacacaat ttcctggtta cggatatcaa tgagttggcg gaaaccatta
      961 aaaaggcgtt ccaaattgcc gcaagcggcc gaccggggcc tgtggtggtt gatgtcccga
     1021 aagatgttac gcaggcgatg gcgaaattca gctatcctca ggaagatatt tttatccgtt
     1081 cgtatcaacc ggttgttcaa gggcatatcg gtcagattaa aaaggccgtg cagatgttgg
     1141 catctgccaa acgtccagtc gtctattttg gcggcggcgt ggtgttgggt aatgcttctg
     1201 aagagctgac ccgatttgtc cgaatgacgg gtgctccgtg cacgggtacg ctgatgggct
     1261 tgggcgctta tccttccagc gaccgccaat tcctcggtat gctcggtatg cacggtactt
     1321 acgaggcaaa ccttgccatg cagaatgcgg atgtcgttct tgccgtaggt gcgcgttttg
     1381 acgaccgtgt ggtttccgta ccgtccaaat ttttcgagaa ggcgaagaag gttatccata
     1441 tcgatgtcga tccttccagc atcgccaaac gcgtgaaggt ggacattccg attgtcggcg
     1501 acgtgaaaaa cgttttgtcc gagatggttg cgctgtggca aaaacaagag tccgtgccgt
     1561 ctgaagatgc tttgggcaaa tggtggaaaa ccatagagga atggcgttcc caagattgct
     1621 tgtggtttga caacggcagc gaaattatca agccccaata tgtgattcag aagcttgccg
     1681 agattaccgg caattcggca atcatcacat cggatgtagg gcagcatcaa atgtttgcgg
     1741 ctcaatatta tcccttcgaa cgtccgcgcc aatggctcaa ttccggcggt ttgggtacga
     1801 tgggcgtggg tctgccttat gcgattggtg caaaacttgc cgccccggat caagacgtat
     1861 tctgtatcac cggcgacggc tcgatccaga tgaacatcca agagctgtcc acctgtttcc
     1921 aatatcggat tccggttaac gtcattacgc tgaacaacgg ttatctcggt atggtacgcc
     1981 agtggcagga aatatattac ggcggacgag agtcggaaac ctatttcgat tctttgcccg
     2041 atttcgtcaa acttgccgag gcatacggcc atatcggtat ccgcgtggac aagaagtctg
     2101 atgtggaagg tgcgttgttg gaagcattga accaaaaaga caggctggtg tttatcgact
     2161 tcctgaccga ccagaaacag aatgtgatgc ccatggtcgg caacggcaaa ggtttggacg
     2221 aaatggtact tccgccgcat atgcgtgcgg acggaaaggc gtaaggagag acaaatgcga
     2281 catatcttat ctgttctgat tgaaaacgaa tcaggtgcga tgagccgcgt ggtcggtttg
     2341 ttctctgcac gcgattacaa tatcgattct ttggcggttg cgccgaccga agacaaaacc
     2401 ctgtcacgga tgaccatcgt tacccacggc gacgagcagg tcatcgaaca aattaccaag
     2461 caactcaata aattgattga agtgattaaa gtggtcgatt tgaatgaaag ccgttttgtc
     2521 gaacgcgaac tgatgttggt aaaagtccgt gccgccggca aagaccgcga cgaattttta
     2581 cgcttgaccg aaatctaccg gggcagcatc atcgacgtaa ccgaccgcag ctatacgatt
     2641 gaaattaccg gctcgacaga caagctggat tcctttttgg aaacggtcgg acgcgcccaa
     2701 attttggaaa ccgtacgcac aggcgcggcc ggcatcggtc gcggtgagcg tattttgaaa
     2761 atttaacgcc gtaacctttc agacggcacg gtatttgaat gtcgtctgaa aaacgaacgg
     2821 caggagagat ttatgtcgaa cattaaaatt gtcgcactgg ttaccgtcaa accggaatac
     2881 acagaaacac tggcagcaca gtttaaagaa ctggtcaaag ccagccgtgc agaagagggc
     2941 aacatcagct acgatctcca tcaggaaatc ggcaaaccga accgttttgt tttcgtggaa
     3001 aattggaaat ctcaagcagc tattgacgaa cataacgcca gcgcgcattt ccaagccttc
     3061 gtccagtccg tcgacggcaa aaccgaagcg ttggaaatcg tattgatgaa tgaagttgcc
     3121 gattaagcgg cacactctgt ttaacccgtc cgaagccgct caacatttta aggcttcgac
     3181 aaccatttac cttaaaggaa atcaaatgca agtctattac gataaagatg ccgatctgtc
     3241 cctaatcaaa ggcaaaaccg ttgccatcat cggttacggt tcgcaaggtc atgcccatgc
     3301 cgccaacctg aaagattcgg gtgtaaacgt ggtgattggt ctgcgccaag gttcttcttg
     3361 gaaaaaagcc gaagcagccg gtcatgtcgt caaaaccgtt gctgaagcga ccaaagaagc
     3421 cgatgtcgtt atgctgctgc tgcctgacga aaccatgcct gccgtctatc acgccgaagt
     3481 tacagccaat ttgaaagaag gcgcaacgct ggcatttgca cacggcttca acgtgcacta
     3541 caaccaaatc gttccgcgtg ccgacttgga cgtgattatg gttgccccca aaggtccggg
     3601 ccataccgta cgcagtgaat acaaacgcgg cggcggcgtg ccttctctga ttgccgttta
     3661 ccaagacaat tccggcaaag ccaaagacat cgccctgtct tatgcggctg ccaacggcgg
     3721 caccaaaggc ggtgtgattg aaaccacttt ccgcgaagaa accgaaaccg atctgttcgg
     3781 cgaacaagcc gtattgtgcg gcggcgtggt cgagttgatc aaggcgggtt ttgaaaccct
     3841 gaccgaagcc ggttacgcgc ctgaaatggc ttacttcgaa tgtctgcacg aaatgaaact
     3901 gatcgttgac ctgattttcg aaggcggtat tgccaatatg aactactcca tttccaacaa
     3961 tgcggagtac ggcgaatacg ttaccggccc tgaagtggtc aatgcttcca gcaaagaagc
     4021 catgcgcaat gccctgaaac gcattcaaac cggcgaatac gcaaaaatgt ttatccaaga
     4081 gggtaatgtc aactatgcgt ctatgactgc ccgccgccgt ctgaatgccg accaccaagt
     4141 tgaaaaagtc ggcgcacaac tgcgtgccat gatgccttgg attactgcca acaaattggt
     4201 tgaccaagac aaaaactgat tgttttcaaa cgggactacc tacacatcgt gtaggcagtt
     4261 ttt
//
LOCUS       DAXHRP010000164         4212 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.164, whole genome shotgun sequence.
ACCESSION   DAXHRP010000164 DAXHRP010000000
VERSION     DAXHRP010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.164"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(82..1128)
                     /gene="recA"
                     /locus_tag="ACFM72_001866"
     CDS             complement(82..1128)
                     /gene="recA"
                     /locus_tag="ACFM72_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HFC6258386.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            1382..2146
                     /gene="aroD"
                     /locus_tag="ACFM72_001867"
     CDS             1382..2146
                     /gene="aroD"
                     /locus_tag="ACFM72_001867"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HFC6258387.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAVLSAVLDQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRCAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2166..4181
                     /gene="rep"
                     /locus_tag="ACFM72_001868"
     CDS             2166..4181
                     /gene="rep"
                     /locus_tag="ACFM72_001868"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HFC6258388.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGGPED"
BASE COUNT         1003 a         1152 c         1147 g          910 t
ORIGIN      
        1 aaactcaaat caagccgttc ggaggcggct caaaaaaacg gtacttcgca gcagaagtac
       61 cgtttatcgg gatttcaggt tttattcttc ggggcgttcg ccgtcggttt cgtcctgcgt
      121 cccttcggtg atgtgcattt ctacgccgtt gagggcgcgg atttttgcgt cgatttcatc
      181 agcaatttcg ggattttcct tcagccagac gcggacgttg tctttgccct gaccgatttt
      241 tgcgccgttg tagctgtacc acgcgccgga tttgttgatg atgtcgtttt ttacgccgat
      301 gtcgatcaat tcgccttccc aactgatgcc ttctccgtag aggatgtcaa actctgcctg
      361 acggaacggg ggggcgactt tgtttttgat gactttgacg cgggtttcgt tgcccaatac
      421 ttcttcgcct tttttgatgg atccggtgcg gcggatgtcg aggcggacgg aagaatagaa
      481 tttcagcgcg ttgccgccgg tggtggtttc ggggctgccg aacattacgc cgatcttcat
      541 ccggatttgg ttgatgaaca caaccagcgt gttggttttt ttgatgtgtc cggtcagttt
      601 acgcaaagcc tggctcatca ggcgcgcctg cagtccgacg tggctgtccc ccatatcgcc
      661 ttcgatttcg gctttgggga caagtgcggc tacggaatcg acgactacca tatctacgcc
      721 gccggagcgc acgagcgtat cgcagatttc caaagcctgt tcgccggtat cgggctggga
      781 gaggtaaagc tcttcgactt ttacgccgag tttgcgggcg taaacgggat cgaaggcgtg
      841 ttcggcatcg acaaaggcgc acacgccgcc gtttttctgg cattgtgcga cggcttccaa
      901 gcataatgtg gttttgccgg aagattcggg accgaagatt tcgacgatgc gcccgcgcgg
      961 cagaccgccg actccgagtg cgaggtctaa tccgagcgat ccggtggaaa tgacttcgag
     1021 gttttcttcc tgctggctgc cgtccatttt catgatggcg cctttgccga aacttttttc
     1081 gatttgcgcc agtgcggcgg caagggcttt gcttttgtcg tctgacattg gggttactcc
     1141 ggaacaaatg cggtatgtgg gatgcggcgc aacacgggct gcggcgcggg atttgtatcg
     1201 ttttcccgat gtgcgggcta tcggtaatgc tgcttcacgg ggttgccatt atcgcatatt
     1261 tccttgcttg ccgatatgcg gcaggacgcg gcggcttgtg ccggaatgga atctggatgc
     1321 cgtctaaaag gcggccggct ttgttataat ggcggctgtt ttttctgtgt gtgcctgttt
     1381 tatgtgttcc tgccttgttg tcaaaaatac cgttatcgga agcggacgca ccaaaatcgc
     1441 cgtgccgctt gtcgcccgcg atgccgccgt actttccgcc gtacttgacc aaatcaaaaa
     1501 cctgcccttc gatatcgtcg agttccgcgc cgactttttg gaatgcgcgg gcagcatcgg
     1561 cgaagtattg cgccacacgc agaccgtccg cgacgcgctg cccgacaaac cgctgctgtt
     1621 tacgttcaga cggcatggcg aaggcggctc attcccgtgt tcggacgatt attattttga
     1681 actgctcgac gcgctgatcg aaagccgcct gcccgacatt atcgatattg agctgttttc
     1741 cggcgaaacc gccgtccggt gcgccgtggc aaatgctcaa aaaaacggca tcgccgccct
     1801 gctctgcaat catgagtttc accgcacgcc gccgcaagaa gaaatcgtat gccgtctgaa
     1861 acagatggag gactgcggcg cggacatctg caaaattgcg gtgatgccgc aaagcgcgga
     1921 agatgtgctg actttgcttt ccgccacgct caaagcgaaa gagcttgccg ccaaaccgat
     1981 tgttacgatg tcgatggggc agacgggggc ggtcagccgg cttgccggac aggtgttcgg
     2041 ctcaagcatc acgttcggtt cgggaacgca aaactccgcg ccggggcaaa tcggcgtatc
     2101 cgccctccgt gcgacactcg actgcctcga aaacggcgca gactgatttc agacagcatc
     2161 aaaacatgat gaaactcaat ccccaacagc tcgaagccgt ccgctacctc ggcggcccac
     2221 tgctcgtcct tgccggtgca ggcagcggca aaaccggcgt gattactcaa aaaattaagc
     2281 atttgattgt caatgtcggc tacctgccgc ataccgttgc cgcaattacc tttaccaaca
     2341 aagccgccgc ggaaatgcag gagcgcgtcg ccaaaatgct gcccaagtcg caaacgcgcg
     2401 ggctgacaat ttgcacgttc cattctttgg gcatgaagat tttgcgcgaa gaggcgaacc
     2461 atatcggtta caaaaaaaac ttctccattc tcgattctac cgacagcgcg aaaatcatcg
     2521 gcgaactctt aggcggtacg ggcaaagaag ccgtattcaa ggcgcagcac cagatttcct
     2581 tgtggaaaaa cgatttaaaa acgcctgaag atgtcgttca gacggcatcg aacatttggg
     2641 aacaacaaac cgcacgcgtg tatgcgagct atcaggaaac cttacaaagc tatcaggcag
     2701 tggacttcga cgacttgatc cgcctgcctg ccgtgctgtt gcagcaaaac agcgaagtgc
     2761 gcaacaaatg gcagcggcgg ctgcgttatc tgctggttga cgaatgccaa gatacgaata
     2821 cctgccaatt tacgttgatg aaacttctga ccggcgcgga aggtatgttt accgccgtcg
     2881 gcgacgacga ccagtccatc tacgcatggc gcggcgcgaa catggaaaac ctgcgcaaaa
     2941 tgcaggaaaa ctatccgcag atgaaggtca tcaaactgga gcaaaactac cgctccaccg
     3001 cgcggattct caaaatcgcc aacaaagtca tcgagaacaa ccccaagctg ttcaccaaaa
     3061 aactttggtc gaaattgggc gaaggcgagc ccgtcaaagt cgttgcctgc caaaacgagc
     3121 agcacgaagc cgactgggtc gtcagccaaa tcgtcaaaca aaaactcatc ggcggcgaca
     3181 aaacccaata tgccgatttc gccgtgttgt accggggaaa gcatcaggcg aggattttcg
     3241 aggaagcatt gcgcggcgcg cgcatcccct accgtctctc cggcggacaa agctttttcg
     3301 acaaagccga aatcaaagac gtgttgtctt atgtgcggct gcttgccaac cccaacgacg
     3361 atcccgcctt tctgcgtgcc gttaccacgc ccaaacgcgg catcggcgat gtaacgctgg
     3421 gcaagctcaa cacttacgcg cacgaacacg aatgcagcct gtatgaagcc gcgcaaaacg
     3481 aagaagccct cgccacgctg aacaatacca accgccaaca cctgcaagcc tttatggata
     3541 tgttcggcag ttaccgtgcc aaagccgaaa ccggcgaagc gggcgagttc atcaacagcc
     3601 tgctcgaaga aatcgactat gaaaaccacc tgcttgccag tgaagaaggc aaagctggcg
     3661 aaatcaaatg gcgcaacgtc ggcgatttgg tatcatggtt tgcgcgaaaa ggcggggaag
     3721 acggcaaaaa catcatcgaa ctcgcccaaa ccgtcgcctt gatgacgctt ttggaaggaa
     3781 aagacgaaga agaaaccgat gccgtctcgc tatccacgct acacgccgcc aaaggtttgg
     3841 agtatccgta tgttttcctt gtcggttgcg aagaaggcgt tttgccgcac aacgacagca
     3901 tcgaagaagg caacgtcgaa gaagaacgcc gcctgatgta cgtcggcatc acccgcgcca
     3961 aacgccaact cacactgacc cactgcgtca aacgcaaaaa acaaggcaca tggcagttcc
     4021 ccgaacccag ccgattcata gacgaaatgc cgcaggaaga tttgaaaatc ctgggtcgca
     4081 aaggcggcga accgattgtc agcaaagaag aaggcagacg caaccttgcc gatataatcg
     4141 gaaggctcga cagcatgaaa aaaggcggtc cggaggatta aaccaagata gggaaacgaa
     4201 gccggagaca at
//
LOCUS       DAXHRP010000165         4159 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.165, whole genome shotgun sequence.
ACCESSION   DAXHRP010000165 DAXHRP010000000
VERSION     DAXHRP010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4159
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.165"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            103..1008
                     /gene="glyQ"
                     /locus_tag="ACFM72_001869"
     CDS             103..1008
                     /gene="glyQ"
                     /locus_tag="ACFM72_001869"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HFC6258389.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENASLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1085..1495
                     /locus_tag="ACFM72_001870"
     CDS             1085..1495
                     /locus_tag="ACFM72_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding protein YggL"
                     /protein_id="HFC6258390.1"
                     /translation="MPVYFRIPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFGRFMDELIAYLAANGLEMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     GREDVATLHATPLVDGFYGDDGWESYSETYKQAD"
     gene            1516..3579
                     /gene="glyS"
                     /locus_tag="ACFM72_001871"
     CDS             1516..3579
                     /gene="glyS"
                     /locus_tag="ACFM72_001871"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HFC6258391.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIAGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVA
                     TAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDVVAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3596..3997
                     /locus_tag="ACFM72_001872"
     CDS             3596..3997
                     /locus_tag="ACFM72_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC6258392.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNAEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKWDSRIKILAHDRLLNRKQQRRDSPANTFKHR
                     LIRALTKISREREKRRQRREQLIGKIIVPFQ"
     gene            4009..>4159
                     /locus_tag="ACFM72_001873"
     CDS             4009..>4159
                     /locus_tag="ACFM72_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC6258393.1"
                     /translation="MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEAN
                     RAAVAA"
BASE COUNT         1066 a         1204 c         1077 g          812 t
ORIGIN      
        1 catgtatgcc gtgttttcaa atcagtctgt ctttgagata aacctatcca aacagcaatg
       61 gaaacagtaa aataaaccct ttattttatc gaatcataag ccatgcttac cttccaacaa
      121 atcatcttca aactgcaaac cttctgggca gacaaaggct gcaccgtcat ccaacccttc
      181 gacatggaag tcggtgccgg cacatcccat cccgccacct gcctgcgcgc gctcggtccc
      241 gagccttggt ttgccgccta cgtccaaccc agccgccgcc ccaaagacgg ccgctacggc
      301 gacaacccca accgcctgca acactattac caattccaag tcgccctcaa acccgccccc
      361 gccaatatcc aagacctcta tctcgactcc ctgcgcgaat tgggcatcga tcccaaagtc
      421 cacgacatcc gctttgtcga agacgactgg gaaaacccca ccctcggcgc gtggggtttg
      481 ggctgggaag tctggctcaa cggcatggaa gtaacccagt ttacctattt ccaacaagtc
      541 ggcggcatcg actgcacgcc cgtactcggc gaaatcacct acggcatcga acgcttggcg
      601 atgtacctgc aaggcgtgga aaacgtctat gacctcgttt gggcaaaaac gctggacggt
      661 aatacagtaa cttacggcga cgtgtaccac caaaacgaag tcgaacaatc cacctacaac
      721 ttcgaataca gcgatgccga ctggctgctg cgccagttca acgactacga agcgcaagcc
      781 aaacgcctgc ttgccgaaga aaacgccagc cttgccttgc ctgcctacga gctggtcctc
      841 aaagcggggc atacgttcaa cctcttggac gcgcgcggcg cgatttccgt aaccgagcgg
      901 gcaacttata ttggacgtat tcgtgcattg agccgcgccg tggcgcaaaa atatgttgaa
      961 agccgcgaaa aactgggctt ccctttaatg aaggcaaatg ccgcctaagg gggcgacgat
     1021 tttttacgtt cgggcggcac gataaggcag ccgtccgtaa aacattatat attttaggaa
     1081 aatcatgcct gtctatttcc gcatcccaag caggaaacgc ctgcacaaaa tgaaccgccg
     1141 tcagcataaa aagctgcatt tgggcgagtt tcaaacattg attttcggcg ttcaaggcag
     1201 tttgcaccaa gctgaggacg atgccgaagc gttcggccgc tttatggacg agctgattgc
     1261 gtatcttgcg gcaaacggct tggaaatggc gggcgggggc gattgcggcg atttttcgtg
     1321 cctgtttcaa aaatccggtg cccgaagctt gggcgaaacc gagaaaaaag ccattatctc
     1381 ttggctggca ggtcgcgaag atgtcgccac tttgcacgcc accccgctgg ttgacggttt
     1441 ttacggggat gacggctggg aaagttacag cgaaacctat aaacaggcag attaaccaaa
     1501 ttcaaagaaa gccgaatgat gacccaaacc cttttaatcg aacttctcac tgaagaactc
     1561 ccgccaaaag ccctgaataa tctgggcaac cattttgccg cttccgttgc cgaaggcttg
     1621 gaaaaagcgc aactgatagc cggcgcggca gaatttaccg cctacgcttc tccgcgccgt
     1681 ttggcggttc aagtcaaaaa cgtcaaagcc gttcaggcag atcagaaaat cgtgaaaaaa
     1741 ggccctgccg tggcgaatgc cgtaaaagac ggtgcgccga ccaaggcttt ggaaggtttc
     1801 gcacgcggtg caggggcgaa aatcgaagac ttgaccatcg tccacgacgg caagcaggac
     1861 gtgtacgcct acgaatacgt ccaaaccggc aaaccgttgg gcgagctttt ggaagacatt
     1921 atcaatgccg cagtgaaaaa actgccgatt ccgaaagtga tgcgttgggg cagcagcacg
     1981 tttaccttcg tgcgccccgt ccacgggctg attgtgctgc acggcggcga catcgtaaac
     2041 gtcagcgttt tgggtctgca aagcggcaat caaaccttgg gacaccgctt cttgtccaac
     2101 ggcgaaatca ccattgaaaa cgccgacagc tacgccgaac aaatgcgcgg gcaaggcaaa
     2161 gtcgtcgctt cgtttgccga gcgcaaagcc gcgattcaga cggcattgga agggcaggcg
     2221 cgccgtctga acgcgaccgt tgccgccgat gaagcattgc tggacgaagt aaccgcgctg
     2281 gtcgaatacc ccgttgtttt ggaagccggt tttgaggaac acttcctcgc cgtgccgcag
     2341 gaatgcctga ttctgacgat gcagcaaaac caaaaatact tcccgctgct cgatcaaaac
     2401 ggcaagctga tgaaccgctt cctgctggtc tccaacctgc aaaccgcaga cccgtcgcac
     2461 atcatccaag gcaacgaacg cgttttgcgc gcgcgcctgt ctgatgccga gttcttctac
     2521 aaacaagacc aaaaggcgac tttggaaagc cgcctgccca agctggcaaa cgtggtttat
     2581 cacaacaaaa tcggttcgca agccgaacgc atcgaacgcc tgcaaagcat tgccgcccac
     2641 atcgctaaag cgttgggcgc agatgccgcc gccgccgaac gcgccgcgcg tctggcaaaa
     2701 gccgacttgg taaccgaaat ggtcggcgag ttccctgaat tgcaaggcac catgggcaaa
     2761 tactatgccc gtttggacgg cgaaaccgaa gaaatcgccg aagccatcga gcaacactac
     2821 caaccgcgtt tcgccggcga caatctgccg aatggcaaag ttgccaccgc cgtggcactg
     2881 gcggacaaac tagaaacctt ggtcggcatt tggggcattg gtctgattcc gaccggcgac
     2941 aaagacccct acgccctgcg ccgcgccgcc ttgggtattt tgcggatgct gatgcagtac
     3001 ggtttggacg tgaacgaact gattcagacg gcattcgaca gcttccccaa aggtttgctc
     3061 aacgaaaaaa cgccgtctga aaccgccgac tttatgcagg cgcgccttgc cgtgttgctg
     3121 caaaacgatt atccgcaaga catcgttgcc gccgtattgg cgaaacagcc gcgccgtttg
     3181 gacgacgtag tggcgaaact gcaagccgtt gccgcgttca aacaactgcc cgaagccgcc
     3241 gcgctcgccg ccgccaacaa acgcgtgcaa aatctgctga aaaaagccga tgccgagttg
     3301 ggcgcggtta acgaaagcct gctgcaacag gacgaagaaa aagccctctt tgccgccgcg
     3361 caaggcttgc agccgaaaat cgccgccgcc gtcgccgaag gcaatttcca aaccgccttg
     3421 tccgaactgg cttccgtcaa gccgcaagtc gatgccttct ttgacggcgt gatggtgatg
     3481 gcggaagatg ccgccgtaaa acaaaaccgt ttgaacctgt tgaaccgttt ggcagagcag
     3541 atgaacgcgg tagccgacat cgcgcttttg ggcgagtaac cgttgtacag tccaaatgcc
     3601 gtctgaagcc ttcagacggc atcgtgccta tcgggagaat aaattgcagc ctttagtcag
     3661 cgtattgatt tgcgcctaca acgcagaaaa atatttcgcc caatcattag ccgccgtcgt
     3721 gaatcagact tggcgcaact tggagatttt gattgtcgat gacggctcga cagacggcac
     3781 acttgccatt gccaaggatt ttcaaaagtg ggacagccgt atcaaaatcc ttgcacacga
     3841 ccgcctcctg aaccgcaaac agcaaaggcg cgattccccc gccaacacat tcaaacaccg
     3901 cctgatccgc gccttgacca aaatcagcag ggaaagggaa aaacgtcggc aaaggcgcga
     3961 acagttaatc ggcaagatca ttgtgccttt ccaataaaag gagaaaagat ggacatcgta
     4021 tttgcggcag acgacaacta tgccgcctat ctttgcgttg cggcaaaaag cgtggaagcg
     4081 gcccatcccg atacggaaat caggttccac gtcctcgatg ccggcatcag tgaggcaaac
     4141 cgggcggcgg ttgccgcca
//
LOCUS       DAXHRP010000166         4119 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.166, whole genome shotgun sequence.
ACCESSION   DAXHRP010000166 DAXHRP010000000
VERSION     DAXHRP010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4119
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.166"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            43..675
                     /locus_tag="ACFM72_001874"
     CDS             43..675
                     /locus_tag="ACFM72_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HFC6258394.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="ACFM72_001875"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="ACFM72_001875"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HFC6258395.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAGTLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKER
                     FSGVPEVAAASEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTGMAHEL
                     AAVPMMSRTHGQPATPSTLGKEISNVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEIGLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGSLEIPVEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2197..4065
                     /locus_tag="ACFM72_001876"
     CDS             2197..4065
                     /locus_tag="ACFM72_001876"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC6258396.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGCYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRDGALQ"
BASE COUNT          933 a         1108 c         1069 g         1009 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttcagag tacggcctga
      841 tgaaggcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccggaa cgcttgccga aatcgacacg gtgatcgaaa
      961 acttctcact tgaagatgcc gccgccgtca aagctattga ggcgaccacc aatcacgacg
     1021 tcaaagccat cgaatattgg cttaaagaac gcttctccgg cgtgcctgaa gtggctgctg
     1081 ccagcgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcattgaga
     1201 agctgaccgg catggcgcat gagttggctg ccgttcctat gatgagccgc acgcatggcc
     1261 agcctgctac accaagcaca ctgggtaaag aaatctccaa tgttgtgtac cgcctgcaac
     1321 gtcagtttaa aaacctgcaa gcgcaagaat tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtc gcttatcccg atgtagattg ggaaacccac tgccgtaact
     1441 tcgtcgaaat cggcctcggt ctgaccttca acccctacac catccaaatc gagccgcacg
     1501 actacatggc ggaattcttc caaaccctca gccgcatcaa cacgattctc atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc ttccaccatg ccgcacaaag tcaaccccat cgattttgaa aactccgaag
     1681 gcaacctcgg tatggcaaac gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gctggcagcg cgacctgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag gctttatcgg atcgctggaa atccccgtcg
     2041 aagccaaagc aaaattgctt gagctgaccc ccgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct
     2221 gaaattgacg gattgcgggc cgttgccgtg ctatccgtca ttattttcca cctgaataac
     2281 cgctggctgc ccggagggtt tttgggggtg gacattttct ttgtcatctc gggattcctc
     2341 attaccggca tcattctttc tgaaatacag aacggttctt tttctttccg ggatttttat
     2401 acccgcagga ttaagcggat ttaccctgcc tttattgcgg ccgtgtcgct ggcttcggtg
     2461 attgcctctc aaatcttcct ttacgaagat ttcaaccaaa tgcggaaaac cgtggagctt
     2521 tctgcggttt tcttgtccaa tatttatctg gggtttcagc aggggtattt cgatttgagt
     2581 gccgacgaga accccgtact gcatatctgg tctttggcag tagaggaaca gtattacctc
     2641 ctgtatcctc ttttgctgat attttgctgc aaaaaaacaa aatcgctacg ggtgctgcgt
     2701 aacatcagca tcatcctatt tctgattttg actgccacat cgtttttgcc aagcgggttt
     2761 tataccgata ttctcaacca acccaatact tattaccttt cgacactgag gtttcccgag
     2821 ctgttggcag gttcgctgct ggcggtttac gggcaaacgc aaaacggcag acggcaaaca
     2881 gcaaatggaa aacggcagtt gctttcatca ctctgcttcg gcgcattgct tgcctgcctg
     2941 ttcgtgattg acaaacacaa tccgtttatc ccgggaatga ccctgctcct tccctgcctg
     3001 ctgacggcac tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg
     3061 gcaagcccca tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt
     3121 tttattgctt tcgcccatta cattacaggc gacaaacagc tcggactgcc tgccgtatcg
     3181 gcggttgccg cgttgacggc cggattttcc ctgttgagtt attatttgat tgaacagccg
     3241 cttagaaaac ggaagatgac cttcaaaaag gcatttttct gcctctatct cgccccgtcc
     3301 ctgatacttg tcggttacaa cctgtacgca agggggatat tgaaacagga acacctccgc
     3361 ccgttgcccg gcgcgcccct tgctgcggaa aatcattttc cggaaaccgt cctgaccctc
     3421 ggcgactcgc acgccggaca cctgcggggg tttctggatt atgtcggcag ccgggaaggg
     3481 tggaaagcca aaatcctgtc cctcgattcg gagtgtttgg tttgggtaga tgagaagctg
     3541 gcagacaacc cgttatgtcg aaaataccgg gatgaagttg aaaaagccga agccgttttc
     3601 attgcccaat tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa
     3661 tccttcctaa tacccgggtt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc
     3721 gtcaaacccg tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag
     3781 gaaaaattga aaagatttgc cgcaaaccaa tatctccgcc ccattcaggc tatgggcgac
     3841 atcggcaaga gcaatcaggc ggtctttgat ttggttaaag atatccccaa tgtgcattgg
     3901 gtggacgcac agaaatacct gcctaaaaac acggtcgaaa tacacggctg ctatctttac
     3961 ggcgaccaag accacctgac ctatttcggt tcttattata tggggcggga atttcacaaa
     4021 cacgaacgcc tgcttaaatc ttctcgcgac ggcgcattgc agtagcctgc cttgccgtcc
     4081 gatatcgttt gtgccgccgt ttgcctttcg gggcggcgg
//
LOCUS       DAXHRP010000167         4082 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.167, whole genome shotgun sequence.
ACCESSION   DAXHRP010000167 DAXHRP010000000
VERSION     DAXHRP010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.167"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(267..2693)
                     /gene="hupB"
                     /locus_tag="ACFM72_001877"
     CDS             complement(267..2693)
                     /gene="hupB"
                     /locus_tag="ACFM72_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HFC6258397.1"
                     /translation="MHIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQSFSKYQTYVATGVARSQPDPQEWVNKSTLFKLGY
                     NFNDRNRIGWIFEDSRTDRFTNELSNLWTGTIYSPATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINSEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFVKLYDPKILTSNQAKITMLIENRSK
                     YKFAYWNNVFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAKNW
                     ELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSDNPNKPTYAPLSDGTALVSSPVW
                     QNQNRTAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALSP
                     WTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
     gene            complement(2724..3799)
                     /gene="hupA"
                     /locus_tag="ACFM72_001878"
                     /pseudo
     CDS             complement(2724..3799)
                     /gene="hupA"
                     /locus_tag="ACFM72_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258130.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupA"
BASE COUNT          788 a          933 c         1254 g         1107 t
ORIGIN      
        1 ggtgcaggtt tctgtgcgga tagcttcgtc attcccgcgc aggcgggaat ccaggttcgt
       61 tgagtttcag tcatttccga taaattcttg cagccttgcg tttctagatt cccactttcg
      121 tgggaatgac ggagagttgc gggaatgacg gagagttgcg ggattgggct tggtacaagc
      181 ctgaaagggg gcggcggtgc gaccgtaaaa aatgccgtct gaaacccaaa tcatcgggtt
      241 tcagacggca ttggcacatc aggagcttag aacttcgctt cgatggtgaa attgtagctc
      301 ctgcccggcg aggtaaagcg ttggatgccg gcgtgggttt tgttgtcaac gcggttgact
      361 gtgccgaatt cgcggatgct gcgtaaagat tcccaagtgt agtactgctt gttggtaatg
      421 ttatacgcgg cggcgcggag cgtaacctgt ttgccgatgt tgaggtaggc ggaaaggtcg
      481 aacagcgtat aggccttgct gtgtttggca taaggccacg ggttgttcaa atcgtcgttg
      541 ctgtggacgg tgtcggacgg ctttttggcg gcggtgcgcg tggcgtaggc gttgatgccc
      601 cagcgtttgg aaggcgcgtc atagcccaag ctgtaaaccg ccgtccacgg cgaaagcgcg
      661 ttgatgggcg tttctttacc gttgttttgc gttgccttgc ctttgatgta gctgacgttg
      721 aggccggtgt gcagcccttt gggcagcccg atgctgtcga ggttccaagt gccgttaaac
      781 tctatgcctt tcacccaggc ggcggtgcgg ttttggtttt gccaaacggg cgagctgacc
      841 aatgccgtac cgtctgaaag cggggcgtag gtgggcttgt tagggttgtc tgacgaaacg
      901 cccatatacg tcaattcgat aaagtcgcgg tatttggttt tgaagcccga gagcttgaag
      961 ttgcccgctt tgccgctgcc cgccagaccc aattcccagt ttttggcttt ttcggctttc
     1021 aggtttgggt tggctttcag gtagaaatcg gggtgtggga acagcagcca ggtttcgtcc
     1081 gaagtcggtg cgcggaagcc ggtgctgtat tttgccaaca agtgcagatg cttggtaaac
     1141 cgccagtcga accccgtgcc gtagctgaag cccgcgtgcg cgcgttccga acccaaatgg
     1201 ggaatctgcc cccggatggc ggtggtgtat ttcggatcgt ctttcgcgct gctgctgttt
     1261 ttgtcgtagc gtatgcccgc attcaggcgg aagcggtcgt tgccgcccaa gtgaaacaca
     1321 ttgttccaat aggcaaattt atatttcgac cggttttcga tcagcattgt gattttggct
     1381 tggttggaag tgaggatttt ggggtcgtaa agttttacga aatagctgta atccgagttg
     1441 gcattgtccc ctctgccgcc gcccaagccg tattgcgccg cccaaacggc tttggaaaag
     1501 tcgagttgtt tttcaaaatc ggcagtccat tgcgcggtgt tttggcggat atgccggaac
     1561 gaatggtaaa cttcactgtt gataccgcgc aaatcgtaat ttttcgggat gtcccaagtc
     1621 caagtgttca tatcgatgcg ctgcttgtcg tagcgcagct tgaggctgtc ccacgggccg
     1681 tgttccaatt cgtttttgta ttcgacgccg gagcggcggc ggtagctcac gtcttggcgg
     1741 tggcggtagt cgcccgttgc gggagagtaa attgtacccg tccacaaatt agacagctcg
     1801 ttggtaaaac ggtcggtgcg ggagtcttca aaaatccagc cgatgcggtt gcggtcgttg
     1861 aaattgtagc ccagcttgaa caaggtgctt ttgtttaccc attcttgcgg gtcgggttgg
     1921 gagcgcgcaa cccctgtggc tacgtaggtc tggtacttgc tgaatgattg ggttgggctg
     1981 aaaacatatc ccttgttttc aattttgaca tcgccctcgg tcgagcggtt tttggtttct
     2041 ttgccgaagc ggcgggtata aaccaataag gcatccaaac caaagagcct gccggcggcg
     2101 gtgatgctgc tgaacttttg gctgtttttg ccgacgctgc cgccctttat ccccaaatgg
     2161 tagggcttgt cttcggaaac ataatcgctt gcggatttgg tttggtaatt gactgcgccg
     2221 cccaatgcgc cgctgccgga tttgagcgag tccgcgcctt tggtgatggt tacttcggaa
     2281 aagttttccg gctcagaagt gttgcggttg gcgttgaagt tgccgtacgc gccgaacaat
     2341 tcttggaagg cttcggaaga gcggctttcc gcctgcgcca gcccgtcaac gttgatggcg
     2401 acgcggtctt tgtccacgcc gcgtatggta aagccgttag aacccgccct gccgccttcg
     2461 acgacggaaa tgccggggtc gtagcgcacc aggtcgtgtt cgtcgttgac caagagcttg
     2521 tctaaggttt tgcggcggat tttttcttcg ccgagttttt gggttttgtg cgtgccggta
     2581 acggtgattt cgttcagcgt ttgggcggac tgcggcgcgg ggtctgccgc aaaggcggga
     2641 aacgcttggg cgatggcggc ggcagccaat acgggcttga aagggatgtg cataagaaaa
     2701 cctttttaaa agcggattaa ttattatttt gtgagatggg tggtactcat atcagtgttg
     2761 ttttcaagtt cttttttata actcacaccg ccgaatacgg tatcgaggga gcggtcgccg
     2821 tcaaaggtga ttttgccgcc tatgctggtt tcgctgtcgc gggagccgtt gaattttcca
     2881 aaaaacttgc cttccaagtt gccggttttg ccgccggagg tggcatcgcc ggaaaaggtc
     2941 agaccgttga tcgttgcatt ttcaattttc acatccggcc cgtaatcgct gttgccgatg
     3001 attttgcctg ccagtttgtt actgttgaaa ttggcggtga taaaggaaag gacgggggta
     3061 ttggtaggat tgaacgtata accactgttt ttcggcggcg tataagagga agtaacaaat
     3121 tgcccgtttc tgacgcggat gccccaaacc tgataagtga ttttgcctgt gcctttggtt
     3181 tcgggtgtgc tgctgccgta ggagaacgca ggaggtggcg ttttgccgac ggggaagccg
     3241 ccggcgaaga ggtcgatttc gccgttggga cctatccacg ccccgaattt catataatct
     3301 tgtttggtaa tttccgcata cgaagtagcc ccggagtcgc tgcagcagat aaagatgcgg
     3361 ctgccgtcgg caagccgctg ccctgcgtgg cggtcgggaa ttttgaagtc gggggaggag
     3421 tagctgggga cgatggggtc ggcgtaggat gaaagggcgt attgcgcgcc gccgggtgtt
     3481 tggaagatga atgatttttc tggtgattta acaccgaaat agattttttc tacttcccgc
     3541 tgctgaatgg aaataccgga ggatgtgttt tgcggggagg catagaggga gcgtctggtg
     3601 cggcgcggcg gatgtgtttc agtgttggcg gtgttgatgt tttcgatttt gctgttatcg
     3661 cttgataact ttacctcacc ggtcagcggc gtggcggtgg ggatggacac ggggacgtgc
     3721 ggttcggcta cccccccccc ccggcacagg cggcaagggc ggcagcaagc ggcagtaagg
     3781 agagggcttt gtatttcatc gcatactcaa tcttgatgat gtgttaataa tagttttgat
     3841 tatcagttta aatgttatat gatgtcaact ggttttgtgg gtcggtgcaa aaatcggtat
     3901 agtggattaa caaaaaccag tacgttgtta cctcgccttg tcctgatttt tgttaatccg
     3961 ctataaagac cgtcgggcat ctgctgccgt cattcccgcg caggcgggaa tctagaacgt
     4021 aaaatctaaa gaaaccgttt tacccgataa gtttccgcac cgacagacct agattcccgc
     4081 ct
//
LOCUS       DAXHRP010000168         4014 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.168, whole genome shotgun sequence.
ACCESSION   DAXHRP010000168 DAXHRP010000000
VERSION     DAXHRP010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.168"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(315..1127)
                     /gene="murI"
                     /locus_tag="ACFM72_001879"
     CDS             complement(315..1127)
                     /gene="murI"
                     /locus_tag="ACFM72_001879"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HFC6258398.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            1329..1790
                     /gene="tsaE"
                     /locus_tag="ACFM72_001880"
     CDS             1329..1790
                     /gene="tsaE"
                     /locus_tag="ACFM72_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HFC6258399.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFTTPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGGGRKCLLTAHTERGRESLPL"
     gene            1787..3037
                     /locus_tag="ACFM72_001881"
     CDS             1787..3037
                     /locus_tag="ACFM72_001881"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC6258400.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTTALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            3117..3935
                     /locus_tag="ACFM72_001882"
     CDS             3117..3935
                     /locus_tag="ACFM72_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6258401.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDIFRNFSL"
BASE COUNT          969 a         1166 c          991 g          888 t
ORIGIN      
        1 ccgtctgctc gggaataacg ggatttgagg tttctgtttt tgattttctg ttttcgcggg
       61 aatgacggtt tagaagttac ccgaaacctc aaaaaaaccg aaaccgaacg gtctggattc
      121 ccgcctgcgc gggaatgacg ggatttgaga ttacagtgta tcgagaagga tgggaaacgg
      181 tgggaattgt gtaaaaaatg ccgtctgaag cctttcagac ggcatttgcg gagacggggc
      241 gtttaatacg gcagggcatt gcaggtgcgt atgcggatgg cgcggacggg gacggtttcc
      301 atccgtacct gccgctaacc caaagacacc atttcaatct gctccatcgt cctgcccaga
      361 aaacgctcgc cgatggttct gaatttcaaa ggaatatcgc tgacgtaaaa acggtagtcg
      421 ggattgttgt tgtcggtatt gagcaatcct tcctgagcaa ggacgcgtgc ggtttcttcg
      481 gcagtcgtaa tcgcggaatc gaccagcgcg acattgtgcg cctccctgcc gattaagggt
      541 ttgagcaagg gaaagtgcgt gcagcccaac accagcgtat cgatgccgtc tgcaagcaat
      601 ggtttgaggt attcgcatac ggtcaggcgg gtaacttcgt gttccaacca accttcctcc
      661 accaaaggga cgagcagcgg cgcggcctgc gtgcggacaa gcgtgtcggg gttgtcccta
      721 tggatggcgc gcgcataagc attgctgtta actgtggtat tggtggcgat aatgccgatt
      781 ttgttgttgc gcgtcgttgc cagtgcggct ttcgcgccgg cggaaatcac gtccaacaca
      841 ggcatattgc ccgtcttttg acggattttc tgccccgcca ccgccgcaat cgtattgcac
      901 gcgataacca tcgccttaac atcgtgttcc aataaaaaat cgacaatctg catcgagaaa
      961 ttttcgatgg tcgccttaga tttcgtcccg taaggcacgc gcgccgtgtc gccgaaataa
     1021 atgatgttct ccatcggcag ccgctccatc agcgcgcgta cattggtcaa accgccgatt
     1081 cccgagtcaa aaacgccgat gggtcgctgc ctgccgatat tttccatcct ttttccaatc
     1141 tgtcctaaac atacaatccg cgtattgtac acgcgccgct ttttcttgac agccgttgcc
     1201 gtctgaaagc agaacgcgga tttggctgtt ataatgctcg gacaagaagc atccgcccct
     1261 cgggtgcaaa gtttgcaaaa cctgcaaaac tgcccataat accctagacc ttacaacaaa
     1321 ccgtttccat gtctgattta ccctctatct cccgattcct tgccgacgaa gccgccacac
     1381 tcgatttggg cgcggcgtgg tcttcccgtt taaacgcacc gctggtcatt tacctcgaag
     1441 gggatttggg tgcgggcaaa accacgctga cacgcggcat cctgcgcgga ttgggtcatc
     1501 agggcgcagt caaaagcccg acctacgcca tcgtcgaatc ttatccgctg gaacgcttca
     1561 ccctgcacca tttcgacctc taccgcttca ccacgcctga agaatgggaa gatgccggat
     1621 tggacgaact gtttgccgca aacagcgtct gcctgatcga atggccgcaa cagggcgggg
     1681 aatttacgcc gcctgccgac atcaccgcaa cattgacaca cgacggcggc ggcagaaaat
     1741 gcctgctgac cgcccatacc gaacgaggac gtgaaagcct gccgctatga ccaaactgac
     1801 acgaagacaa atcatccgcc gcaccgccgg cacactgttc gccctaagcc ccatcgcatc
     1861 cgccgttgcc aaaacggtac gcgcaccaca attcaccgcc gcacggatat ggccgtcgca
     1921 cacctacacc cgcctgacgc tggaaagcac aaccgcgctc aaataccaac acttcacgct
     1981 cgacaacccg ggcaggttgg tcgtcgacat acaaaacgcg aacatcaata ccgtattgca
     2041 cggactgtct cagaaggtta tggcggacga cccttttatc cgcagcatac gcgcgggtca
     2101 gaacacgccg accaccgtcc gcctcgtcat cgatttgaaa cagccttcct acgcgcaagt
     2161 tttttccctc ccccccgtcg gcggctttaa aaaccgcctc gtcgtcgatc tctatccgca
     2221 agggatggat cccgacgatc cgatgatggc gctgcttaac ggcagcctga acaaaacccg
     2281 tcgcggctcc cctgaagccg acctcgctca aaacactccc gcacaaaccg aacgcggcaa
     2341 aaacgggcgc agacccgtca ttatgatcga ccccggacac ggcggcgaag accccggcgc
     2401 cgtcagcccg ggcggtttgc aggaaaaaca cgtcgtcctc tccatcgccc gcgaaaccaa
     2461 aaaacaattg gaagccttgg gttacaacgt ctttatgacg cgcaacgaag acgtgttcat
     2521 cccattgggc gtgcgtgtcg ccaaagggcg cgcacggcgg gcggacgtat ttgtctccat
     2581 ccacgccgat gccttcacca gcccctccgc gcgcggcacg ggggtttata tgttaaacac
     2641 caaaggcgcg accagctctg ccgccaaatt cttggaacag acgcaaaaca atgccgacgc
     2701 ggtcggcggc gtaccgacca gcggcaaccg caacgtcgat accgccctgc tcgatatgac
     2761 ccaaaccgcc acactgcgcg acagccgcaa actcggcaaa ctggtgcttg aagaattggg
     2821 caggctcaac catctgcaca aaggcagggt ggacgaagcc aatttcgccg ttttgcgcgc
     2881 acccgatatg ccgtctatcc tggtcgaaac cgccttcctg tccaaccctg ccgaagagaa
     2941 gctgctgggc agcgaatcct tccgccgaca gtgcgcccaa tccattgcct cgggtgtcca
     3001 acgctacatc aatacatccg tattgaagcg gggttgattg aaaaggcggt gtttcaatat
     3061 agttgtcgga tgaaggcagg cataaaccta cttccgcccc aaaccgcgtt tttatgatga
     3121 aaggtatgga taaattgaga taccaacagg attttttaaa tatccgcccc atttttacag
     3181 ccggcgaaca agaatacctg accgaattgt ccgatcggct tcctttatct gttttaacgg
     3241 actccgtgcg taatattgaa gaaatcggta tcgattttgt gtacagttct gccaaattgg
     3301 aaggaaacac ttataatcaa tacgatacgc aggcattgct taaactcggg caaaccgcag
     3361 gcgggaagtt atattcggat gccgtaatgt taatcaacct gagggaaagt taccggcacc
     3421 tgctgtccgg tttggacagc cccgagccgt ttgactggtt ggatttctta aaaaccaccc
     3481 acagcctgat ttccgaaaac ttactggaaa aaggctccgg cggcgtagtc cgccgcgaca
     3541 gcgttaccat aagcgggaca gactacaccc ctttatctaa cccgcaaagt ttggatacgg
     3601 aattaaaatg gttgcttcaa gaagctccca aaatagaaaa tcctttcgac cgcgccgttt
     3661 atctccataa taatttggcg tatcttcaat attttaaaga ttgcaataaa cgtactgcca
     3721 gaaactgcat gaccttgtcg ctgatgcgct ccggtttttt tccttgcgta ttctcccccg
     3781 acagttatcc cgcctatgcc gaggctgtcg tagcctatta cgaaaccggc gattacggtt
     3841 tattcaagaa atattttatt tcggcatacg aaaataccgt aaataagtac ggcccacagc
     3901 ctgatatgga tattttccgc aacttctccc tttaattcca aggggttgtt atccgtatct
     3961 tccgcacgcg gcaaatgcgg cggcaaaatg gacacgcccc tcccttacct tcgg
//
LOCUS       DAXHRP010000169         3987 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.169, whole genome shotgun sequence.
ACCESSION   DAXHRP010000169 DAXHRP010000000
VERSION     DAXHRP010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.169"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(94..990)
                     /gene="argB"
                     /locus_tag="ACFM72_001883"
     CDS             complement(94..990)
                     /gene="argB"
                     /locus_tag="ACFM72_001883"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HFC6258402.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1160..2290
                     /locus_tag="ACFM72_001884"
     CDS             1160..2290
                     /locus_tag="ACFM72_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HFC6258403.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2361..3212
                     /gene="lgt"
                     /locus_tag="ACFM72_001885"
     CDS             2361..3212
                     /gene="lgt"
                     /locus_tag="ACFM72_001885"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HFC6258404.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDLEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3295..3957)
                     /locus_tag="ACFM72_001886"
     CDS             complement(3295..3957)
                     /locus_tag="ACFM72_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HFC6258405.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          878 a         1174 c          973 g          962 t
ORIGIN      
        1 tcaggaatga cggtttggaa attgcccgaa accccaaaaa cagaaaccgg acaaacgggt
       61 tttccgccaa agccggcatt ttccgacttt gcttcaggca tcttccccac cgcccaaaat
      121 catcgaaccg ataccggcat cggtaaagat ttccagcaaa agcgcgttgg gcaccctgcc
      181 gtcgatgatg tgcgtggctt tcacgccgtt gacggcggct tcgaccgcag aagcgatttt
      241 cggcagcata ccgccataca gcgtgccgtc ggcaatcagt tcatcaatcc gtttcggcgt
      301 gagtttggtc agcagattgc ccgttttgtc catcacaccg gcgatattcg tcatcatcaa
      361 gagtttttcg gcgttcaatt cttccgccaa tttgcctgct accaaatcgg cgttgatgtt
      421 gaacgcttcg cctttttcac ctacgccgac gggggcgacg acgggaatgc agccacgttc
      481 tatcagccct ttaaccaaac ctgtatcgat gctttccacc gtaccgacct gtccgatgtc
      541 tacgccattc tgttcgggcg tatcgatcaa aagtttcttc gccttaatga aatgatcgtc
      601 gcgtccgctc acgccgaccg cgtgtccgcc atatgtgtta atcatcgaca cgatttcttt
      661 attgacatgc ccacccaaca ccatttcgac aatatccatc gcctctttgt cggtaacgcg
      721 cattccttgg acaaactccc cctttttgcc gactttttca agcatcgcat tgatctgcgg
      781 cccgccgccg tgaacgatga cgggatgaat gccgaccagc ttcagcagta cgacatcgcg
      841 ggcaaaccct tctttcaagg caggttcggt catcgcgttg ccgccgtact tgatgacggc
      901 gaccgaaccg gaaaaccggc ggatgtaagg cagcgcttcg gcaaggatac gcgctttgtc
      961 ggcggcggaa ataatgtttt cagactccat aacggctccc tattgttgac aatttcggct
     1021 tatgttaacg ccaaacgccg tctgaaacaa tcttcagacg gcatccggca gaccttcggg
     1081 caggttgaag ccttgcgata cgggcggtaa aatcacagtt tatccggttc gagaaaccgg
     1141 cgacagcaag gactttccca tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt
     1201 cgtcaaagac ctgaccgatc cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc
     1261 cgattttgca caatggttct acttccggct gcaaggcgcg gcatatcaaa actgcatcat
     1321 gcattttgaa aacgcggcag aagccgccta cccgaaaggc tgggaaggct atcaggcgtg
     1381 tgcctcatac gaccgccgca actggttccg cgtaccgact tcctacgaaa acggcgtact
     1441 gaccgtcaat catacgccgc tgtccaacag cgtgtattac gcctatttcg aaccttactc
     1501 cgaagaacag catttaaacc tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga
     1561 cgacttgggc agcaccgtgc aagggcgcga catcaatctg ctgaccatcg gcaatcaggt
     1621 cgaaagcgat ctgaaaatct ggattaccgc ccgccagcat ccgggcgaaa ccatggcgga
     1681 atggtttgtc gaggggctgc tcggcaggct gctcgatccg caagacccga cagcgcgcac
     1741 cctgctcgac cgcgccacgt tctatatcgt ccccaatatg aaccccgacg gttcggcact
     1801 gggcaacctt cgtaccaacg ccgccggtgc gaacctcaac cgcgaatggg aaaatccgac
     1861 tttggaaaaa agccccgaag tgttcttcgt gcgcgaaaaa atgctggaaa ccggcgtgga
     1921 tttgttcttg gacatccacg gcgacgaagg gctgcccttt atctttgttg caggaactga
     1981 aggcgtgcca aactacaatc cgcgcatttc cgcgttggaa acacagttca aaaccgccct
     2041 tttgaacgcc agccccgatt tccaagacga atacggttac gaaaaagatg cgcccggtca
     2101 ggcaaacatg accttggcaa caaactgggt cggcaaccgt ttcaactgcc ttgcctatac
     2161 gttggaaatg ccgttcaaag acaatgccaa cctgcccgac gacgatttcg gatggaacgg
     2221 tcaacggtcg ttgcgcttgg gcgaagccgc gttgtccgcc atcctcaaca tcatcggcga
     2281 tttgcgctga aacccttatt gcagaaatgc cgtctgaagc atcatgcctt tcagacggca
     2341 tttgaaaacg aaagcccgtt atgattaccc atccccaatt cgaccccgtc cttatcagta
     2401 tcggcccgct tgccgtccgc tggtatgccc taagctacat cctcggattt attcttttta
     2461 cctttctcgg cagaaggcgc atcgcgcaag gcttgtccgt ttttaccaaa gaatcgctcg
     2521 acgacttcct gacatggggc attttgggcg taattttggg cgggcgtttg ggttacgtcc
     2581 tgttttacaa gttttccgac tacctcgccc atccgcttga tattttcaag gtatgggaag
     2641 gcggaatgtc gttccacggc ggctttttgg gtgtagttat tgccatatgg ttgttcggtc
     2701 gcaaacacgg catcggcttc ctcaaactga tggacacggt cgcaccgctc gttccactgg
     2761 gtctcgcttc gggacgtatc ggcaacttca tcaacggcga actttgggga cgcgttaccg
     2821 acatcaacgc attttgggca atgggcttcc cgcaggcgcg ttacgaagac ctcgaagccg
     2881 ccgcgcacaa tccgctttgg gcagaatggc tgcaacaata cggtatgctg ccgcgtcatc
     2941 cctcgcagct ttatcagttt gcacttgaag gcatctgcct gttcgccgtc gtttggctgt
     3001 tctctaaaaa acagcggccg accggacaag tcgcctcact cttcctcggc ggctacggca
     3061 tattccgctt cattgccgaa tttgcacgcc aacccgacga ctatctcggg ctgctgacct
     3121 tggggctgtc gatggggcaa tggttgagcg tcccgatgat tgttttgggt atcgtcggct
     3181 ttgtccggtt cggcatgaaa aaacagcact gaccgcctgt gaaaaatacc gtctgaaaca
     3241 tggaaatccg gtttcagacg gcatttttac gtttggttca tggaaacaaa cgcttcaatt
     3301 cttaccgcaa cacgccttgt attttctgcc gctgccgcac ggacagggat cgttcctgcc
     3361 tgttttttcg ccttccctgc ggacggtttg cggcttgttg atgaccgcct gccagtagcg
     3421 gtagatatcc gccaatgcat aaggcaactc ggattccagt tccgccagct cgccttctgt
     3481 gaattgcaga cggatagtgc cgttgtcctc ttcgtcgtaa ataccgccca atgccatgat
     3541 gggataaaac aactcttcaa acgcttcatc atcgacggct tcaaaccaat cggtcggcac
     3601 aatatccaaa ccgtaaagat aagcattgca ccatgtgtaa aaatcgctgc cgccgtcttc
     3661 gttttcatac agccacaaat cgggcagttt tttatccgac atcgcggcgg ttgtttccat
     3721 cgccattgcc aaaaccagcc gttcgatttc ggaacgttcg gcggcggtaa attgcgattc
     3781 gtcgcccaac acttcgggca gccagtcgag cggtgtcaat ttgtccggcc cgctcaacag
     3841 cgccgtcata aaaccttgaa cctcgtcgca acgcatcgtg ttgccttgtt cgcttttggc
     3901 atccaacaat tcgctcaacc gccgtttgga tgcttcggta aatttttggg aatccatcat
     3961 tttccttttc aaatgggttt tgcgccc
//
LOCUS       DAXHRP010000170         3966 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.170, whole genome shotgun sequence.
ACCESSION   DAXHRP010000170 DAXHRP010000000
VERSION     DAXHRP010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3966
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.170"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            82..2340
                     /locus_tag="ACFM72_001887"
     CDS             82..2340
                     /locus_tag="ACFM72_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HFC6258406.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRLFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDGLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFEAEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVRAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPGAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLDGSHAAALEK"
     gene            2353..3018
                     /gene="pgmB"
                     /locus_tag="ACFM72_001888"
     CDS             2353..3018
                     /gene="pgmB"
                     /locus_tag="ACFM72_001888"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HFC6258407.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVSEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLET
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKASGALPIGVGKAEDLGSDIPLVPGTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(3228..>3966)
                     /locus_tag="ACFM72_001889"
     CDS             complement(3228..>3966)
                     /locus_tag="ACFM72_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC6258408.1"
                     /translation="CRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLK
                     IEKASAAVVDATIIQTAGSKQRQTIEVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGY
                     KQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEE
                     HQLLDGIMRKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
                     VSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT          951 a         1177 c         1014 g          824 t
ORIGIN      
        1 tcgtcgcctt gtcctgattt ttgttaatcc actataagat ttcaccattc cctcaaatca
       61 atccaaacag gagcttcata aatgtacaca agaattatgg aaatcagccc ttggacgctg
      121 cgttcggcaa aactggaaaa agaacacaaa cggctgcaag agagcctgac cagtttgggc
      181 aacggctata tgggtatgcg cggcagcttt gaggaaacct actccgccga cagccacttg
      241 ggcacctaca tcgccggcgt gtggttcccc gacaaaaccc gcgtcggctg gtggaaaaac
      301 ggctatccca aatatttcgg caaagccatc aacgcgctca atttcagcaa agtcaaaatc
      361 tttgtcgatg gtcaagaggt ggacttggcg aaaaacgatg ttgccggctt ctccgtcgaa
      421 ctcgatatgc agcacggcgt gttgcgccgc ttgttcaccg tattcggcgt gcgtttcgat
      481 gtgtgcaaat tcctgtccgt cgcgcaaaaa gagctggcgg ttatccgctg ggaagccgta
      541 tccgttgacg gcaaaaccca ccaagtccgc atcgattcca tcatcgatgc cgacgtgaaa
      601 aacgaagact ccaactacga agaaaaattc tggcaggtat tggacaaagg cgtttcagac
      661 ggcctctcct acattgccgc ccaaaccgtt gccaaccctt ttggtgtgga acaatttatc
      721 gtcaacgccg agcaaacttt cgccggcagc ttcaaagccc tcggcggcag ccaaaccgac
      781 tggcaggtct ccaattcttt cgaggccgaa gtcggcggca cgcccaaaac ctttgaaaaa
      841 cgggttattg ttaccaccag ccgcgattat cagggcttgg aagcagtgaa agccgcaggc
      901 cgcgccttgt cggaaaaagt cgcaggcgtt gcgtttgaaa ccttgctgga cgcgcacaaa
      961 gcaggctggc tgcaccgttg ggaaatcgcc gacgtggtca tcgaaggcag cgacgaagca
     1021 cagcagggca tccgcttcaa cctgttccaa ctgttctcca cctactacgg cgaagacgcg
     1081 cgactgaaca tcggcccgaa aggctttacc ggcgaaaaat acggcggcgc gacctattgg
     1141 gacaccgaag cctacgccgt gccgctttac ctcgcactgg cggaacccga agttacccgc
     1201 aacctgctgc aataccgccg caaccaactg ccgcaggcac aacacaacgc gcgcgaacag
     1261 ggcttggcgg gcgcactcta tccgatggta acgtttacgg gcatcgagtg ccacaacgaa
     1321 tgggaaatca ccttcgagga aatccaccgc aacggcgcga ttccttacgc catctataac
     1381 tacaccaact acaccggcga cgagggctat cttgctaaag aaggcttgga agtcttggtc
     1441 gaagtgtccc gcttctgggc ggaccgcgtc cacttctcca aacgcaacgg caaatacatg
     1501 attcacggcg taaccggtcc gaacgaatac gaaaacaaca tcaacaacaa ctggtacacc
     1561 aacaccctcg ccgcatgggt attggactac acccgcgaag ccttggcgaa atacccgcgt
     1621 ccggatttga acgtgcgtgc cgccgagttg gaaaaatggg cggacatcag cgcgaatatg
     1681 taccgtccgc atgacgaaga actcggcgta ttcgtccaac acgacggctt cctcgataaa
     1741 gacatccgcc cagtgtccgc gctttcgccc gacgatttgc cgctcaacca gaaatggtcg
     1801 tgggacaaaa tcctgcgttc gcccttcatc aaacaggcgg acgtcttgca aggcatctac
     1861 ttcttcggcg accgtttcaa tatcgacgaa aaacgccgca acttcgactt ctacgaaccg
     1921 atgaccgtgc atgaaagctc gttgtcgccg tgtatccact ctattctcgc cgccgaactg
     1981 ggcaaagaag aaaaagccgt ggaaatgtac cggcgcaccg cccgcctgga cttggacaac
     2041 tacaacaacg acaccgaaga cggcctgcac atcacctcca tgaccggctc gtggctcgcc
     2101 atcgtccaag gtttcgccca aatgaaaacc tggggcggca aactcagctt tgcaccgttc
     2161 ctgccgggcg catggacagg ctacgccttc catatcaact accgaggccg tctgattaaa
     2221 gtcgccgtcg gcaaagaaaa cgtcgtcttc accctgctca aaggcgagcc gctcgatttg
     2281 caggtgtatg gcaaagacat cacgctcgac ggcagccacg ccgccgcgtt ggaaaaataa
     2341 ggagggtgca aaatgacgtt taccgcagtg ctcttcgatc tcgacggcgt catcaccgac
     2401 accgccgaat accactaccg cgcgtggaaa aaactcgccg aagaactggg catcagcatc
     2461 gaccgcaagt ttaacgagca gctcaaaggc gtgtcgcgcg acgattcgct caaacgcatc
     2521 ctcgcgcacg gcggcaaaac cgtcagcgaa gccgagttcg ccgaactgac ccgccgtaaa
     2581 aacgacaact acgtcgagat gattcaggca gtcaaacccg aagacgtgta tcccggcatt
     2641 ttgcccctgc tggaaacatt gaaagcaaac ggcaaaaaaa tcgccctcgc gtccgccagt
     2701 aaaaacggcc cgttcctgct cgaacgcatg gggctgaccc acttcttcga caccgtcgcc
     2761 gaccctgccg ccgtcgcgca ttccaaaccc gcccccgaca tcttcctcgc cgccgccgag
     2821 ggcgtgggcg cggacatccg ccgctgcatc ggcattgaag acgctgccgc aggtgtcgcc
     2881 gccatcaaag cctccggcgc cttacccatc ggtgtgggca aagccgaaga cttgggtagc
     2941 gacatcccgc tggtgcccgg caccgccgag ctgacctacg cctacctgca aaacgtgtgg
     3001 gcacagtcgg gcaggtaaaa cgcgtcagat aaagtgttaa ggaagtaaaa ggccgtctga
     3061 acagtgtttc agacggcctg agacctttgc aaaattcctt tccctcccga cagccgaaac
     3121 ccaaacacag gttttcagct atttccgccc caaatatctc ctaattctac ccaaataccc
     3181 ccttaatcct gcccggatac ctgataatca ggcatccggg ctgcttttta ggcggcagcg
     3241 ggcgcactta acctgttggc cgctttcaac aggttcaaac acatcgcttt caggtggctt
     3301 tgcgcactca ctttaatcag tccgaaatag gctgcccgag cgtagcggaa tttacggtgc
     3361 agcgtaccga agctctgttc aaccacataa cgggtcttcg acaaatatcg gttgcgtttg
     3421 gtttgcactt ccgacagcgg gcggttgcgg caggctttgc gcataatgcc gtccaacaac
     3481 tgatgttctt ccagatgttg ccggttttcc gcactgtcgt agcctttgtc ggcatagacg
     3541 gtcgtacctt cgggtaaccc ttccaacaac ggcgacaggt gtttgcactc atgggcattg
     3601 gcgggagtaa tgtgcagttt ctcgatatag ccttctgcat cggtacgggt atgttgtttg
     3661 taaccgagtt tgtagaggcc gtttttcttg atccaacggg catcgctgtc cttactcggt
     3721 gtggtttggc cgctgacttg tccttcttca tcgacttcta tggtctgacg ctgtttgctg
     3781 ccggcggtct gaataatggt ggcgtcaacg acagcggcgg atgctttctc tatttttaaa
     3841 cctttttcgg tcagttgtcg gttaatcagt ttgagcaatt cggacagggt gtcgtcttgc
     3901 gccagccagt tgcggtagcg gcataaggtg ctgtaatcag ggatgctcag ttcgtcgaaa
     3961 cggcaa
//
LOCUS       DAXHRP010000171         3953 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.171, whole genome shotgun sequence.
ACCESSION   DAXHRP010000171 DAXHRP010000000
VERSION     DAXHRP010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3953
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.171"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(142..1503)
                     /gene="accC"
                     /locus_tag="ACFM72_001890"
     CDS             complement(142..1503)
                     /gene="accC"
                     /locus_tag="ACFM72_001890"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HFC6258409.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGLIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(1617..2072)
                     /gene="accB"
                     /locus_tag="ACFM72_001891"
     CDS             complement(1617..2072)
                     /gene="accB"
                     /locus_tag="ACFM72_001891"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HFC6258410.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(2054..2311)
                     /locus_tag="ACFM72_001892"
     CDS             complement(2054..2311)
                     /locus_tag="ACFM72_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HFC6258411.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            2428..3468
                     /gene="queA"
                     /locus_tag="ACFM72_001893"
     CDS             2428..3468
                     /gene="queA"
                     /locus_tag="ACFM72_001893"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HFC6258412.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LSDYVGEGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
     gene            3686..>3953
                     /locus_tag="ACFM72_001894"
     CDS             3686..>3953
                     /locus_tag="ACFM72_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258413.1"
                     /translation="MQISISAGNLQLTVTIDAGMILALIVAFKSIIHQNRPSNRTVSY
                     LAIPTARAFEDSALNNLHLSRLVSPTLGVQTIQSFRLPLFVYKIN"
BASE COUNT          827 a          973 c         1194 g          959 t
ORIGIN      
        1 ttctctttga gctaaggcga ggcaacgccg tactggttta aagttaatcc actatatcga
       61 aatcggtttc agacggcgcg gggcaaggga aatgccgtct gaacgcggac gggcggcttc
      121 agacggcata tcggcggcgg tttacttgtc ctgtttggct ttgcgatctt ccagccagtg
      181 ttccaaatag tggatgctga cgccgccttt ttggaaaccc gcatcggcga acaggtcgcg
      241 gtgaagcggc gtattggttt tgatgccggt taccgccagc tcggcgagtg cgacgcgcat
      301 tttcgccatt gcctgttcac gcgttttgcc gtgtacgcag attttgccga tcaggctgtc
      361 gtagtacggt gggatgcggt agccttggta aatgtggctg tccacgcgga taccgaagcc
      421 gccgggcagg tggcagcttt caatcaggcc cgggcttgga atgaagttgt acgggtcttc
      481 ggcgttgata cggcactcaa acgcgtggcc ttcgacttga atatcctttt gtttgtattg
      541 caaaggcagg ccggcggcga tgcggagttg ctcctgcacg atgtccacgc cggtgatgag
      601 ctcggtaacc ggatgctcga cctgaacgcg cgtgttcatc tcgataaaga aaaattcgcc
      661 gtcttcgtat aaaaactcaa acgtacccgc gccccggtag ccgatgcgtt tgcaggcatc
      721 ggcacaggcg ttgccgattt tggcgcgttc tttttcagtg atgaacggag ccggtgcttc
      781 ctcgatgact ttttggtggc ggcgttgcag cgaacagtcg cgctcggcaa ggtagatggc
      841 gttgccgtgt tcgtcggcaa tcacttggat ttcgacgtgg cgcggacgtt gcaaatagcg
      901 ttccatgtaa accatcgggt tgccgaatgc cgcgcctgct tctgccttgg tcatttcgac
      961 agattggagg aggtcttctt ttttctcgac cacgcgcata ccgcgaccgc cgccgccgcc
     1021 agaggctttg ataatgacgg gataaccgac tttatcggcg attttgagga tttcttcgcc
     1081 gtcgtcgggc aatgcgccgt cagaaccggg gacgcagggt acgcctgccg ctatcatcgc
     1141 gtgtttggcg gagactttgt cgcccatcag gcggatggtg tcgggtttcg ggccgataaa
     1201 ggtaaagccg gactgctcga cctgttcggc gaaatcggcg ttttcggcaa ggaaaccgta
     1261 gcccggatgg acagcgtccg cgcagcttac ttcggcggcg gcgataatgg cggggacgtt
     1321 aaggtagctt tgcgcggaag cggcagggcc gatgcacacg gattcgtcgg cgagtttgac
     1381 gtgcaggctg tctttgtcgg cctcggaatg cacggcgacg gtggcaatgc ccatttcgcg
     1441 gcaggcacgg agtacgcgta atgcgatttc gcctcggttg gcgattaaaa cttttttcag
     1501 catgatgact gttcctgtgg ttccggcaac ccgtccgtaa aaaaaaaggt gcgggaacgc
     1561 cgaaggggga aagcatttca gacggcatcg gaagtttatg ccgtctgaaa acaggattat
     1621 ccgatgatga agagcggttc gccgaattcg acgggcgtac cgttttcgac cagaatttct
     1681 ttgaccgtgc cggatttttc ggcttcgatt tcgttcatca gcttcatcgc ttcgatgatg
     1741 cacagcgtgt cgccggcttt aacctgttgg ccgacttcga caaaaggcgc ggcattcggg
     1801 ccgggtgcgc ggtagaacgt gccgaccata ggcgattttt gcgcgtcgga caaatcgcgg
     1861 gcggcaggtg cggcggcggg cgcggatgcc gcaacgggtg cggcggcagg cgttacggcc
     1921 ggcgcggcgg caggtacggg cgcggcgtaa acgggtgcgg cggcgatggt tcgggtgatg
     1981 cggacttttt cctcgccttc ggttacttcg atttcggcga tacccgattc ttcaaccaaa
     2041 tcaatcagtt tttttaattt gcgcaaatcc atttctgttc ctttaaaggc tgccggtgtt
     2101 ccggcgggtt gttgcgttgg tttttcagaa aacagccggc ttgcggcaac ggcgcaaacc
     2161 gggcggaatg gtgttcggat acggttttcc tgtggtggaa aacaaccgtg agaatgtgtt
     2221 tattttcccg aagttgtcgg taaatgtcca gtaaaatatc aaaaaacggc ggtttttggg
     2281 ggaaatgtgc aggaagtttg attttgcgca caagatgttc caggttaaga gtgtttattc
     2341 taatctgttg gtttttcgga caaagatgcc gtctgaaaaa gggctaaagt gcgtataatg
     2401 gcggcttgcc cgaacgagag tgtaaaaatg gatatttcag attttgattt taccctgccc
     2461 gaaaagctga ttgcccagca tccgcccgaa gtgcgcggca gcagccgcct tttggttgcg
     2521 ttgcccgata tgccgctgca agaccgggtg ttcggcgatt tatccgatta tgtcggtgag
     2581 ggcgacgttt tggtgttcaa caacaccaaa gtcatgaaag cgcggctgtt tgggcagaaa
     2641 gacagcggcg gcaggatcga agccctgatt gagcgcgtgt tggacaacca taccgcactg
     2701 gcgcacatcc gttcgtccaa gtcccccaag cccggtatgg ggctggtgtt tgaaggcggc
     2761 atccgtgccg tgatggtcgg gcgtgagggc gaactgttct gcctgcgttt tgaaggcggt
     2821 caaaccgttt acgaactttt ggaacagaac ggacacctgc ccctgccgcc ttatatcgaa
     2881 cgtgccgccg atgcggatga cgacagccgt tatcaaaccg tttatgccaa atatcagggt
     2941 gcagtcgccg cgccgacggc gggtctgcat tttacggaag aacttttgcg ccgcctgaaa
     3001 gacaaaggcg cggtaaccgc agaagtaacc ctgcacgtcg gtgcggggac attccaaccc
     3061 gtgcgtgtgg aaaaaatcga agaacacaaa atgcacagcg aatggtttga agtgccgtct
     3121 gaaaccgccg ccgccgttga ggcggcaaaa gcccggggga acaaagtctg ggcggtcggc
     3181 acgacttcca tgcgcgccct cgagtctgcc gcgcgtgcga cgggtcgtct gaaagcgggg
     3241 cagggcgaca ccgatatttt catcacgccg ggctaccgtt ttaatgttgc cgacaggctg
     3301 gttaccaatt tccatctgcc gaaatcgacg ctgctgatgc ttgtcagcgc gttttcgggt
     3361 atgggtcata tccgcgccgc gtatcgttat gcggtcgaac gcgaataccg tttcttcagc
     3421 tacggcgatg cgatggtttt ggggcggaac gaaggggtgg tacgttagaa cagcctcaag
     3481 tctattgggg gaagacaagt gccgtctcaa cggacgttcg gacggcattc ttttgttgat
     3541 ttgaatgaaa ggaactgtat gacatagatt caggcgcgag aggcgagaaa ctcaaagagc
     3601 ggtgggataa gcaaaaatcc ccatgctgcc aacaagggga tttttgcatt cctgacaagt
     3661 ttgaaacttt acaggagtca tcaaaatgca aatctctatt tcagcaggca atttgcaatt
     3721 gactgtaacg attgatgctg gaatgattct agccttgatt gttgctttta agtcaataat
     3781 ccaccaaaac cgcccgagca atcggacggt ttcctatttg gcgataccca ccgccagagc
     3841 cttcgaagat tctgccctaa ataatctgca ccttagtcgg ttggttagtc caaccttagg
     3901 ggtgcagacc attcaatctt tcaggctgcc tttgtttgtt tataagataa att
//
LOCUS       DAXHRP010000172         3914 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.172, whole genome shotgun sequence.
ACCESSION   DAXHRP010000172 DAXHRP010000000
VERSION     DAXHRP010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3914
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.172"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            354..3557
                     /gene="nalP"
                     /locus_tag="ACFM72_001895"
     CDS             354..3557
                     /gene="nalP"
                     /locus_tag="ACFM72_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HFC6258414.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGTSAPDFNAGG
                     TGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHT
                     GDFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNE
                     NYKNYTAYMRKEAPEDGGGKDIKASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIG
                     GRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTT
                     SRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFI
                     FSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAP
                     YEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAV
                     GVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGS
                     QLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVYL
                     ADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGYL
                     NRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNA
                     ARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGI
                     RPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHN
                     GTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRSTWSE
                     NSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLM
                     QLGALGGVNVPFAATGDLTVESGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAG
                     LKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGL
                     GADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1058 a         1060 c         1030 g          766 t
ORIGIN      
        1 atagtacgga accgattcac ttgttaaaga atcgttctct ttgagctaag gcgaggcaac
       61 gccgtactgg tttttgttca tccactataa ctagggaaat tcaaattaag ttagaattat
      121 ccctatgaga aaaagccgtc taagccggta taaacaaaat aaactcattg agctatttgt
      181 cgaaagttca aatttccatt ttaaaacaat tagtaaaatc gagtttatcc tagttgtcca
      241 agacaacccc tataataata taattcaaaa tataaaaatg ggttacatct aaacattacg
      301 gaatttttat tccctcgcct gaattctatt gtcagattca aggagacctc atcatgcgaa
      361 cgaccccaac cttccctaca aaaactttca aaccggctgc catggcgtta gctgttgcaa
      421 caacactttc tgcctgctta ggcggcggcg gcggcacttc tgcgcccgac ttcaatgcag
      481 gcggcaccgg tatcggcagc aacagcagag caacaacagc gaaatcagca gcagtatctt
      541 acgccggtat caagaacgaa atgtgcaaag acagaagcat gctctgtgcc ggtcgggatg
      601 acgttgcggt tacagacagg gatgccaaaa tcaatgcccc ccccccgaat ctgcataccg
      661 gagactttac aaacccaaat gacgcataca agaatttgat caacctcaaa cctgcaattg
      721 aagcaggcta tacaggacgc ggggtagagg taggtatcgt cgatacaggc gaatccgtcg
      781 gcagcatatc ctttcccgaa ctgtatggca gaaaagaaca cggctataac gaaaattaca
      841 aaaactatac ggcgtatatg cggaaggaag cgcctgaaga cggaggcggt aaagacatta
      901 aagcttcttt cgacgatgag gccgttatag agactgaagc aaagccgacg gatatccgcc
      961 acgtaaaaga aatcggacac atcgatgtgg tctcccatat tattggcggg cgttccgtgg
     1021 acggcagacc tgcaggcggt attgcgcccg atgcgacgct acacataatg aatacgcatg
     1081 atggaaccaa gaacgaaata atgtctgcag ccatccgcaa tgcatgggtc aagctgggcg
     1141 aacgtggcgt gcgcatcgtc aataacagtt ttggaacaac atcgagggca ggcactgccg
     1201 accatttcca aatagccaat tcggaggagc agtaccgcca agcgttgctc gcctattccg
     1261 gcggtgataa aacagacgag ggtatccgcc tgatgcaaca gagcgattac ggcaacttgt
     1321 cctaccacat ccgtaataaa aacatgcttt tcattttttc ggcaagcaat gacgcacaag
     1381 ctcagcccaa cacactgacc ctattgccat tttatgaaaa agatgctcaa aaaggcatta
     1441 tcacagtcgc aggcgtagac cgcagtggag aaaagttcaa tggctccaac cattgcggaa
     1501 ttactgccat gtggtgccta tcggcaccct atgaagcaag cgtccgtttc acccgtacaa
     1561 acccgattca aattgccgga acatcctttt ccgcacccat cgtaaccggc acggcggctc
     1621 tgctgctgca gaaatacccg tggatgagca acgacaacct gcgtaccacg ctgctgacaa
     1681 cggctcagga catcggtgca gtcggcgtgg acagcaagtt cggctgggga ctgctggatg
     1741 cgggtaaggc catgaacgga cccgcgtcct ttccgttcgg cgactttacc gccgatacga
     1801 aaggtacatc cgatattgcc tactccttcc gtaacgacat ttcaggcacg ggcggcctga
     1861 tcaaaaaagg cggcagccaa ctgcaactgc acggcaacaa cacctatacg ggcaaaacca
     1921 ttatcgaagg cggttcgctg gtgttgtacg gcaacaacaa atcggatatg cgcgtcgaaa
     1981 ccaaaggtgc gctgatttat aacggggcgg catccggcgg tagcctgaac agcgacggca
     2041 ttgtctatct ggcagatacc gaccgatccg gcgcaaacga aaccgtgcac atcaaaggcg
     2101 atctgcagct gggcggcgaa ggtacgctgt acacacgttt gggcaaactg ctgaaagtgg
     2161 acggtacggc gatgaccggc ggcaagctgt acatgtcggc acgcggcaaa ggggcaggct
     2221 atctcaaccg taccggacaa cgtgttccct tcctgagtgc cgccaaaatc gggcgggatt
     2281 attctttctt cacaaacatc gaaaccgacg gtggtctgct ggcttccctc gacagcgtcg
     2341 aaaaaacagc gggcagtgaa ggcgacacgc tgtcctatta tgtccgtcgc ggcaatgcgg
     2401 cacggactgc ttcggcagcg gcacattccg cgcccgccgg tctgaaacac gccgtagaac
     2461 agggcggcag caatctggaa aacctgatgg tcgaactgga tgcctccgaa tcatccgcaa
     2521 cacccgagac ggttgaaact gcggccgccg accgcacaga tatgccgggc atccgcccct
     2581 acggcgcaac tttccgcgca gcggcagccg tacagcatgc gaatgccgcc gacggtgtac
     2641 gcatcttcaa cagtctcgcc gctaccgtct atgccgacag taccgccgcc catgccgata
     2701 tgcagggacg ccggctgaaa gccgtatcgg acgggttgga ccacaacggc acgggtctgc
     2761 gcgtcatcgc gcaaacccaa caggacggtg gaacgtggga acagggcggt gttgaaggca
     2821 aaatgcgcgg cagtacccaa accgtcggca ttgccgcgaa aaccggcgaa aatacgacag
     2881 cagccgccac actgggcatg ggacgcagca catggagcga aaacagtgca aatgcaaaaa
     2941 ccgacagcat tagtctgttt gcaggcatac ggcacgatgc gggcgatatc ggctatctca
     3001 aaggcctgtt ctcctacgga cgctacaaaa acagcatcag ccgcagcacc ggtgcggacg
     3061 aacatgcgga aggcagcgtc aacggcacgc tgatgcagct gggcgcactg ggcggtgtca
     3121 acgttccgtt tgccgcaacg ggagatttga cggtcgaaag cggtctgcgc tacgacctgc
     3181 tcaaacagga tgcattcgcc gaaaaaggca gtgctttggg ctggagcggc aacagcctca
     3241 ctgaaggcac actggtcgga ctcgcgggtc tgaagctgtc gcaacccttg agcgataaag
     3301 ccgtcctgtt tgcaacggcg ggcgtggaac gcgacctgaa cggacgcgac tacacggtaa
     3361 cgggcggctt taccggcgcg actgcagcaa ccggcaagac gggggcacgc aatatgccgc
     3421 atacccgcct ggttgccggt ctgggcgcgg atgtcgaatt cggcaacggc tggaacggct
     3481 tggcacgtta cagctacgcc ggttccaaac agtacggcaa ccacagcgga cgagtcggcg
     3541 taggctaccg gttctgacgg acaggaagca gacagccgca aagatcacgg tctttgcggc
     3601 tgtttcttat gaaaagaaaa ccctattcca attgcctgct tctattgttt caagacttct
     3661 tccaaagatt cggcattaat cagatgtata gcggattaac aaaaatcagg acaaggcggc
     3721 gaagccgcgg acagtacaaa tagtacggaa ccgattcact cggtgcttca gcaccttaga
     3781 gaatcgttct ctttgagtta aggcgaggca acgccgtact ggtttttgtt aatccgctat
     3841 attccaccat ctctaagatt tacagcgata cacaggtaat ttaaggaatg cccgaaccgt
     3901 cattcccgcc actt
//
LOCUS       DAXHRP010000173         3913 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.173, whole genome shotgun sequence.
ACCESSION   DAXHRP010000173 DAXHRP010000000
VERSION     DAXHRP010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.173"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(38..604)
                     /locus_tag="ACFM72_001896"
     CDS             complement(38..604)
                     /locus_tag="ACFM72_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HFC6258415.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWVAFVLLGGLGLKMMREGLSGEAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVTVGLTAGRALGVLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIQ"
     gene            complement(1001..2515)
                     /gene="katA"
                     /locus_tag="ACFM72_001897"
     CDS             complement(1001..2515)
                     /gene="katA"
                     /locus_tag="ACFM72_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HFC6258416.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAANWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCHRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2863..3714
                     /locus_tag="ACFM72_001898"
     CDS             2863..3714
                     /locus_tag="ACFM72_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HFC6258417.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREIENWLSDNP
                     LLERKDTDEFSDAGFSHYTAPARQIGGDEGEDMLSNIAGEEDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALQKFDPAGVAA
                     ADLNESLILQIERSGECAAKPAALHIVRNALDSINGNRSQTLARIKKHLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            complement(3728..>3913)
                     /locus_tag="ACFM72_001899"
     CDS             complement(3728..>3913)
                     /locus_tag="ACFM72_001899"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258418.1"
                     /translation="IAVFPTNSRHLKSRYPYKNRKSCHSHKNRNSKTEIPNPRHSRQT
                     PVIPAFAEMPAFGLLSL"
BASE COUNT          899 a         1056 c         1042 g          916 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactatattt tccgacatca ttgaatcaaa cccaaatgcg
       61 acaagagcgt ccatgtaccg atggcaatca acaccaaacc tccggcaaac tcggcgcgtt
      121 tgccgaacaa tacgcccaaa gcccttcccg ccgtcagccc gaccgtaacc atcaccgtcg
      181 tcgccatacc gatgattgcg gcggcaaagg cgatgtttac ctccataaac gccaagccca
      241 ccccgactat catggaatca atactggttc caaaagcagt caaaaccgtc atccataggc
      301 tttcccgttt gctttcgcgc acatcttccg cctcgccgga cagcccttcg cgcatcattt
      361 tcagacccag cccgcccagc aggacgaaag ccacccaatg gtcccattcg ctgataaacg
      421 gcttggcata aaaaccgcct acccagcctg ccagcggcgt gagcgcttca accgtgccga
      481 acaccaaagc cgttgccgca attttgcgcg gaggcattct gaccgccgca ccctttgcca
      541 atgcgacggc aaacgcatcc atcgacatcc ccagagcaat caagagcaaa gcataaaaac
      601 ccataccgca cccgtcctca aaaagggcgg attatagcaa aagcaaaaaa atgcaaaaat
      661 gccgcacgaa aacccgcatc ccgtcattcc cgcaaaaaca aaaaatcaaa aacagaaatc
      721 ccgtcattcc cgcgcaggcg ggaatccaga gttgtcggtg cggaaactta tcggataaaa
      781 cggtttctcc aaccccgagt ccttgattcc cactttcgtg ggaatgacgg gatattttgc
      841 gtttaataaa aaacgcccac tgaaacggcg ggggcgggat ggggaaatgc cgtctgaagc
      901 ggtcaaacga cgtttcagac ggcattttta tgcccggtta tttccggtag cggacggcgc
      961 gggacaggat ttcttcaatt tccatccaca taatgccccc ttacagcaaa ccgggctggc
     1021 cgagtgcggg gtcggtcgcg cgggcggctt gtgcgtcttc gacagtcaat ccgagggctt
     1081 ttgccacgcc ttcgccgtat gccgggtcgc aacggtggca gttgcggata tggcggtatt
     1141 tgatgaagtc gggcgcatcg cccatggctg cggcggtgtt gccgaacaat gcctgtttct
     1201 gcgcgtcgtt catcaggttg aacagggcgc gcggttggct gaaatagtcg tcatcgtctt
     1261 ggcggtagtc ccagtttgcc gcgtcgccgt tgattttcaa aggcggttcg gcgaagtcgg
     1321 gctgctgctg ccattggccg aagctgttgg gttcgtagtg cggcaggctg ccgtagttgc
     1381 cgtcggcgcg tccttgtccg tcgcgctggt tgctgtgaac agggcaacgc ggacggttga
     1441 cagggatttg gcggaagttc acgcccaagc ggtagcgttg cgcgtcggcg taattgaaca
     1501 aacgggcttg caacatttta tccgggctcg cgccgatacc gggaacgagg ttgctcggtg
     1561 cgaaggcgga ttgttccaca tcggcgaaga agttttcggg attgcggttc aactcgaatt
     1621 cgcccacttc aatcagcgga tagtcttttt tcggccaaac tttggtcagg tcaaacggat
     1681 gatagggtac tttttccgca tcggcttcag gcatgacttg gatgtacatc gtccatttcg
     1741 gaaactcgcc gcgctcgatg gcttcgtaca ggtcgcgctg gtggctttcg cggtcgtcgg
     1801 cgatgatttt tgcggcttct tcgttggtta ggtttttaat gccttgttgg gtgcggaagt
     1861 ggaatttcac ccaaaaacgc tcgcctgctt cgttccagaa gctgtaggta tgcgaaccga
     1921 agccgtgcat atggcggtag ccggcgggga tgccgcggtc gctcatcacg atggtaactt
     1981 ggtgcagtgc ttcgggcagc agcgtccaga agtcccagtt gtttgtggca gagcgcatat
     2041 tggtgcgcgg gtcgcgtttg acggctttgt tcaggtcggg gaatttacgc ggatcgcgca
     2101 ggaagaacac gggcgtgttg ttgccgacca catcccagtt gccttcttcg gtataaaatt
     2161 tcaaggcaaa accgcggatg tcgcgttcgg catcggctgc gccgcgttcg cctgccacgg
     2221 tggtgaaacg ggcgaacatc tcggtttttt tgccgacttc gctgaagatt ttggcgcggg
     2281 tgtatttggt gatgtcgtgc gttacggtaa atgtgccgaa cgcgcccgaa cctttggcgt
     2341 gcatacggcg ttcggggatg acttcgcgca cgaagtcggc gagtttttca ttcagccaca
     2401 aatcctgcgc cagcaggggg ccgcgcgggc cggcggtcag gctgttttga ttgtcggcaa
     2461 cgggcgcgcc gttgttcatg gtcagatggg ttacggggca tttagaggta gtcatcgctc
     2521 ttgttccttt tctcaggttg gtcaaatggg ggtaaacggc ttacagtacg atttggcgaa
     2581 aagcgtattc gtaaccggtt tcttgattgc aataaatttc ttgaatcgac attttgtttt
     2641 ccttttgcaa aaactatgga tgcgactata cgccaagatt ttcgctatta aaactatgaa
     2701 atcgatttaa tattgttata agcaatcggt ttttgatttt cgtttgtttt ttgttatcgg
     2761 acagaatccg aacccgctca ttaaaaccat ttataatgca atgacgcttt gcggcatttt
     2821 ttgcgccgac aggctgaaaa taacaatttc ccccacatta tcatgacatt actcggaata
     2881 aagctcaaac agacccagca gctcaaccag cggctgcaac aatctttgcg cgtattgcag
     2941 atgtcgggta tcgaacttga acgcgagatc gaaaactggc tgtcggacaa tcccctgctc
     3001 gaacgcaaag acacggatga attttccgat gccgggtttt cccattacac cgcgcccgcg
     3061 cgccaaatcg gcggagacga aggcgaagat atgctgtcca acatcgccgg cgaagaagat
     3121 ttcaagcaat acctgcacgc gcaagtgtgc gaacacccgc tttccgatca agaatccgcc
     3181 tgtgtccaca tccttatcga tttccttgac gagcagggct acctgaccga cagcatcgaa
     3241 gacatcctcg accatacgcc cttggagtgg atgttggatg aggcaatgct gaaacaagcc
     3301 ctgaccgcat tgcaaaaatt cgacccggca ggcgtggccg ccgccgattt gaacgaatcg
     3361 ctgatactgc agatagaaag atcgggcgaa tgtgctgcca aacccgccgc cctgcatatc
     3421 gtccgaaacg ccctcgacag cattaacggc aaccgcagcc aaaccctcgc acgaataaaa
     3481 aaacacctgc cccaaaccga cagcggcaca ctcgaagccg cactcgacct cattgcttcg
     3541 ctcaatccct ttcccgccgc cggttttgcc tcgtccacgc ccacgccgta ttctgacgag
     3601 gcgctcgcca acctgctggc tttccgcggc atggaggttt ctcgccgcac cattgccaaa
     3661 tacagagaat cctttgagat tccggcagca cacaaacgca aaaccgcaga ataattgccg
     3721 aataatctta taaagacaac aaaccaaaag ccggcatttc tgcgaaagcg ggaatgacgg
     3781 gggtttggcg ggaatgacga gggtttggga tttctgtttt tgaatttctg tttttgtgag
     3841 aatggcaaga ttttcggttc ttgtatggat aacgagattt tagatggcgg gaatttgtcg
     3901 ggaaaacagc aat
//
LOCUS       DAXHRP010000174         3899 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.174, whole genome shotgun sequence.
ACCESSION   DAXHRP010000174 DAXHRP010000000
VERSION     DAXHRP010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.174"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            180..1697
                     /locus_tag="ACFM72_001900"
     CDS             180..1697
                     /locus_tag="ACFM72_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC6258419.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1758..3539)
                     /locus_tag="ACFM72_001901"
     CDS             complement(1758..3539)
                     /locus_tag="ACFM72_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HFC6258420.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNIASDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDFGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPDTSF
                     ADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGSIGYLNPCSGGLGFEGIFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENGRCALLDRHLCRLNTAARALNLPLPDGCENQIKQYIADLPDGVFRVKALLASDG
                     ISLSHAVLNHLADKQRVIISPTILPAQNYLRRFKTTCRTVFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFIKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          820 a          876 c         1277 g          926 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactataa atgtgaaatc cgccctttga aaatcgggcg
       61 gcggtttttt gcctgcccgc tttcagacgg caaagccggt tttcacgggt ttctgcctgt
      121 ttttcggatg gtttgacgtg cttcggcggc gtgtttgccg gaaaggtaaa tgacagggta
      181 tgttgtattt cagatacggc tttttggttg tttggtgtgc ggcaggtgtt tctgccgcct
      241 atggggcgga tgcgcccgcg attttggatg acaaggcatt gttgcaggtg cagcggtcgg
      301 tgtcggataa gtgggcggaa tcggattgga aagttgaaaa tgatgccccg cgcgtggttg
      361 acggggattt tttgttggcg catccgaaaa tgttggaaca tagtttgcgc gacgcgctca
      421 acggcaatca ggcggatttg atcgcttcgt tggcggattt gtatgccaag ctgccggatt
      481 atgacgcggt tttgtacggc agggcgcggg ctttgctggc gaaattagcg ggaaggccgg
      541 cggaggcggt ggcgcggtat cgggaactgc acggggaaaa tgcggcagac gagcggattt
      601 tgctggattt ggcggcggcg gagtttgacg atttccgact gaagtcggca gaaaggcatt
      661 ttgcggaggc ggcaaaattg gatttgccgg cgccggtttt ggaaaatgtg gggcgttttc
      721 ggaaaaaaac ggaggggctg acgggctggc gtttttcggg cggcatcagc ccggcggtca
      781 atagaaatgc caataatgcc gcgccgcagt attgccggca aaacggaggc cggcagatat
      841 gcagtgtcag ccgggcggag cgggcggcag ggttgaatta tgaaatcgag gcggaaaaac
      901 tgacggcgtt ggcggacaat cattatttgt tgttccgttc caatatcggc ggcacgagct
      961 attatttcag taaaaaatca gcttatgacg acgggttcgg cagagcgtat ttgggttggc
     1021 agtataaaaa tgcacggcag acggcgggga ttttgccgtt ttatcaggtg cagttgtcgg
     1081 gcagcgacgg ctttgatgcg aaaacaaaac gggtaaacaa ccgccgcctg ccgccgtata
     1141 tgctggcgca cggagtcggc gtgcagctgt cccatactta ccgcccaaac ccgggatggc
     1201 aattttcggt cgcgctggaa cattaccgcc aacgctaccg cgaacaggat agggcggaat
     1261 acaataacgg caggcaggac gggttttatg tttcgtcggc aaaacgtttg ggcgaatcgg
     1321 caactgtgtt cggcggctgg cagtttgtgc ggtttgtgcc gaaacgcgaa acggtgggcg
     1381 gcgcggtcaa taatgccgcc taccggcgca acggtgttta tgccggttgg gcgcaggagt
     1441 ggcggcagtt gggcggtttg aacagtcggg tttccgcgtc ttatgcccgc cgcaactata
     1501 agggcgttgc ggctttctcg acagaggcgc aacgcaaccg cgaatggaat gtctcgctgg
     1561 ctttgagcca cgacaagttg tcgtacaaag gtatcgtacc ggcgttaaat tatcgtttcg
     1621 gcaggacgga aagtaatgtg ccgtatgcga aacgccgcaa cagcgaggtg tttgtgtcgg
     1681 cggattggcg gttttgaatg gtggaataat gccgtctgaa ccttgtggaa acaggttcgg
     1741 acggcatttt tgcgcgttca ggcaagagcg gcggcaaata cgccgcgcaa ggcgttggag
     1801 aggcggattt cttcggcttc ttgcagtgtt ttttgtgtga tgtgtgtttc gattacttga
     1861 tttgtttgca aatatttttg cggttcgtcc aacacggctt ggcgcattat gccgtttaaa
     1921 atgtctaaat ctaaagaggg cgtaagccat tgtccgcgat gtttgatgaa cacgttgctt
     1981 ctgccgcctt caagcaggat gccgtctgaa ttgaaaaaca ggctgtcgaa cgcgccttgt
     2041 gtttcggcgg tttgccacgc ttggtcgaag acggtgcggc aggtggtttt gaagcggcgc
     2101 aggtagtttt gtgcgggcag gatggtcggc gaaatgatga cgcgttgttt gtcagccaaa
     2161 tggtttaaaa cggcgtggga caggctgatg ccgtctgaag cgagcagggc tttgacgcga
     2221 aacacgccgt cgggcaagtc ggcaatgtat tgtttgattt gattttcgca gccgtcgggc
     2281 aggggcaggt tgagggcgcg tgcggcggtg ttcagacggc ataggtggcg gtcgagcagg
     2341 gcgcagcgtc cgttttcgac gcgcagggtt tcaaaaatgc cgaagtcggg gcgcaattcg
     2401 ttgaggaaac gggctttcca gccgcattcc cgatattcgg cggcggggtc gctgtcgatg
     2461 acgatgccgg aaccgacacc gtacacgcct tgataaatgc cgtctgaaag cggcgtgagc
     2521 gataaggtgc ggataacgac gttgaatatg ccttcaaacc ccaagccgcc ggaacacggg
     2581 ttcaaatagc cgatgctgcc cgtataaagt ccgcgcgctt cggtttcgag tgtttcgata
     2641 atctgcatac tcattttttt gggcgcgccg gtgatgctgc cgcaggggaa ggcggcgcgg
     2701 aggatgtcgg cgaacgaggt gtccggcagg gcttgggctt ggatggtgct ggtcatctgc
     2761 cagacgctgc cgaaacgcga cactttaaac ggttcgggca cgcatacttt gccggtttgg
     2821 gcgatcttgc cgaagtcgtt gcgcagcaaa tcgacaatca tcacgttttc ggcgcggttt
     2881 ttcgggtcgg cttgcaattc ggcggcgcgg cgttcgtctt gtccgtcgcc caaaatcggc
     2941 gcggtgcctt tcatcggttc ggtgctgatg gtgccgtctg aagcgatgtt gaggaagagt
     3001 tcgggcgaga aacacagcgt ccacgcggat tgcccctccg catcgggcag gtgggacaag
     3061 acggcatagg ggacgggctg gcgcaggcgg cggtagaggc tgacgggatt gccgtaggct
     3121 tgcaggtgca ggcgagtggt gtagttgatt tgataggtgt cgccgcgtcg gatggcttcg
     3181 tggatttggc ggatatggtc gaggtaatcg gcttcggata cggaggattg cggcgtggaa
     3241 atgccggcgg ggaggccgtc tgagtgtcgg gcaagccagc ttgcggcatc ggtgtcggcg
     3301 cagtcggcaa accagtgcag ggcaaggttg ccgccgcgtt cggactcgac ccccgtcagc
     3361 ggcaaaccga atccgtagtc tgcaaacaac acggcatgca gccctttttg ccagcccgat
     3421 tgcagcgcgc cgtccaaagc atcgagttct tcgggacgga aaaaacggct ttccacatga
     3481 ttttgatagc gttttgcgcg gccgcttacg gcatcgtcaa acagggcgaa ataaggcatg
     3541 gcaattcggg gcaaatgttt tgattatacg ctctttttac acatattttc agacgattcg
     3601 gcaaatatcg gcaaaatgta attttatgta gagaaagtgg gggcgaaggt gtaaaattgt
     3661 gaaaacaaat tccgatttcc aacctgaaat acaataagga gacctttatg acagaccacc
     3721 agctgcaacc gtttgaaaac gtagaattag gcgaaaagca agaccagctc caagtatagt
     3781 ggattaacaa aaaccagtac agcgttgcct cgctttagct caaagagaac gattctctca
     3841 ggtgctgaag caccaagtga atcggttccg tactatctgt actgtcttcg gcttcgttg
//
LOCUS       DAXHRP010000175         3897 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.175, whole genome shotgun sequence.
ACCESSION   DAXHRP010000175 DAXHRP010000000
VERSION     DAXHRP010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.175"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..2250
                     /locus_tag="ACFM72_001902"
     CDS             <1..2250
                     /locus_tag="ACFM72_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC6258421.1"
                     /translation="PYANENSRILLSTTDISSENGKIKLQSYGDQFYYAGQGELYTFD
                     KRSYKTGKWYKLKHVTEIKEHKNAKADPVSLSASQGIEIKSGGNIGAHATLFDAPRGS
                     VKIEAGRGLVLYAVEDLNYDKLDTRTKRKFIGITYDKVHDTTTHTMKTALPSRVVAES
                     ANLQSGWDAKLQGTQFETTLGGAAIRAGVGDQARADAKIILEGIKSSVRTETVSSSKS
                     ALWQKQAGRGSNIETLQLPSFTGSVAPVLSAPGGYIVDIPKGNLKTEIEKLAKQPEYA
                     YLKQLQTAKNVDWKQVQLVYDKWDYKAEGLTGAGAAIIALAVAAATGGVGAGLIGAAQ
                     GTTSAAIANAAFTSLATQASISLVNNKGNVGKTLKELGRSRTVKNLVVAAATAGVSNK
                     IGTSALANVSDKQWVNNMTVNLADAGSAALINTAVNGGSLKDNLEANILAALVNTAHG
                     EAASKIKGLDQHYVAHKIAHAVAGCAAAAANKGKCQDGAIGAAVGEIVGEALVKNTDF
                     SDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAK
                     VVYKVARKGLKNGKINVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGT
                     ELNRANKGEAAQKVKEVLEKNRPYIPNKGAVPNMSTYMKNNPFGKQLAQISEKTTLPT
                     QQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGA
                     AKGRKLNLK"
     gene            2259..2636
                     /locus_tag="ACFM72_001903"
     CDS             2259..2636
                     /locus_tag="ACFM72_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258422.1"
                     /translation="MGTLNDIKKILINVGLYQGFDLTDPKVSEEVNHETANMKWIKDY
                     TSDGNWDNEFKEDLKNFLDYMEVCQLALNDKNFKIASNSLFMAMIYAGNLSLIFDSIK
                     TDISTLLSAEYKKNSFSWPSLDE"
     gene            2914..3288
                     /locus_tag="ACFM72_001904"
     CDS             2914..3288
                     /locus_tag="ACFM72_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258423.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            3359..>3897
                     /locus_tag="ACFM72_001905"
     CDS             3359..>3897
                     /locus_tag="ACFM72_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC6258424.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACY
                     LKQLQVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTAGAGAGAALGLNG
                     AAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLMVAVATAGVADKIG
                     ASALNNVSDKQWINNLTVNL"
BASE COUNT         1226 a          840 c          929 g          902 t
ORIGIN      
        1 ccgtatgcca atgaaaacag ccgcatcctg ctgagcacca cggatatcag ttcggaaaac
       61 ggcaaaatca aactgcaatc ctacggcgac cagttctact acgccggaca gggtgagctc
      121 tacaccttcg ataaacgcag ctataaaacc ggtaagtggt acaaactaaa acatgttact
      181 gaaatcaaag agcataaaaa cgccaaagcc gacccggtga gcctcagtgc gtcacaaggt
      241 attgaaatca aatccggcgg caatatcggt gcccacgcca ccttgtttga tgcaccccgc
      301 ggctccgtta aaatcgaagc cggacgtggg ctggttctct atgccgtgga agatctcaac
      361 tacgacaaac ttgacacccg taccaagcgc aaatttatcg gcattaccta cgacaaggtg
      421 cacgacacca ccacccacac catgaaaacc gccctgccct caagggtagt tgcagaatcg
      481 gccaacctgc aatcaggctg ggacgccaaa ctgcaaggca cccagtttga aaccacgctg
      541 ggcggcgcag ccatccgtgc aggtgtaggc gatcaggcac gagcagatgc caagattatt
      601 cttgaaggca tcaaaagtag tgtgcgcact gaaacagtaa gcagtagcaa atctgccctc
      661 tggcagaaac aggccggacg cggcagcaat atcgaaacct tgcaactgcc aagtttcaca
      721 ggctccgttg cgcccgtact ctctgccccc ggcggctata tcgttgatat tccgaaaggc
      781 aatctgaaaa ccgaaatcga aaagctggcc aaacagcccg aatacgccta cctgaaacag
      841 cttcagacgg ccaagaacgt cgattggaaa caggtgcagc ttgtctacga caagtgggac
      901 tataaagccg aaggcctgac cggagccgga gccgccatta tcgccctggc agtagcggca
      961 gcaaccggag gcgtcggtgc cggtttgatc ggtgcagcac agggaaccac atctgccgcc
     1021 atagccaatg cagcatttac ctcgctggct acccaagctt ccatttcgct ggttaataac
     1081 aaaggcaacg tcggcaaaac cctgaaagaa ctgggcagaa gccgtacggt gaaaaatctg
     1141 gtcgtggctg ctgccaccgc aggcgtatcc aacaaaatcg gcacgtctgc tttagccaat
     1201 gtcagcgaca agcagtgggt caacaacatg accgtgaatc tggccgatgc gggcagtgcc
     1261 gcgctgatta acaccgccgt taacggcggt agcctgaaag acaatttgga agcgaatatc
     1321 cttgcggctt tggtgaatac cgcgcatggg gaggcggcga gtaagatcaa aggactggat
     1381 cagcactatg tcgcccacaa aatcgctcat gccgtagcgg gctgtgcggc tgcagcggcg
     1441 aataagggca aatgtcagga cggcgcgatc ggtgcggctg tgggtgagat tgtcggggag
     1501 gctttggtta aaaataccga ttttagcgat atgaccccgg aacaattaga tctggaagtt
     1561 aagaaaatta ccgcctatgc caaacttgcg gcaggtacag ttgcaggcgt aacgggagga
     1621 gatgtcaata ctgctgcaca aaccgcacaa aacgcggtag aaaataatgc ggttaaagct
     1681 gttgtaactg ctgcaaaagt ggtttataag gtagccagaa aaggattaaa aaacgggaaa
     1741 atcaacgtta gagatttaaa acagacgttg aaagacgaag gttataattt agccgacaac
     1801 ctgaccacct tattcgacga aacattggat tggaacgatg ccaaagccgt tattgatatt
     1861 gtcgtcggaa cagagctgaa tcgcgctaat aaaggggaag cggcacaaaa ggtcaaggaa
     1921 gttttagaaa aaaatcgtcc ttatatccct aataaaggtg ctgtaccgaa tatgagtaca
     1981 tacatgaaaa ataatccttt tggaaaacag ctggctcaaa tttcagaaaa gacaacgctt
     2041 ccgacgcagc aagggcagtc tgtcttcttg gtaaaaagaa accaagggtt attaaaaacc
     2101 ggtgataggt tttatttaga tggccaacat aaaaatcatt tagaggtttt tgataaaaat
     2161 gggaacttta agtttgttct aaatatggat ggttcgctta accaaatgaa aactggggca
     2221 gcaaaaggtc gtaaattaaa cttaaaatag gaaattttat gggaacattg aatgatataa
     2281 aaaaaatctt gattaatgtg gggctttatc aagggtttga tttgacagat ccaaaagtat
     2341 cagaagaagt taatcatgaa acagctaata tgaaatggat taaagattat acttcagacg
     2401 ggaattggga taatgaattt aaggaggatt taaaaaactt tttagattat atggaagtat
     2461 gccaattagc cctaaacgat aaaaatttca aaattgccag taattcttta tttatggcta
     2521 tgatttacgc aggtaatcta tctcttatat ttgattcaat aaaaactgat atatcaacat
     2581 tattgagtgc tgagtataaa aagaatagtt tttcatggcc atctcttgat gaatagaaag
     2641 caagttgtag cctgcatgaa atctaaaacc catgcataag gtgtgggctt cagtatacgc
     2701 gttccatgat ttacggccat atgccgtctg aaaagctcaa ttttttcaga cggcatttgt
     2761 tatgaaagta aatatttaga ttccctgtat actgtttaga ctcgtgtgtg ctgagtaagc
     2821 tgtagtctgc atgaaaccta aaactcgctc aaaattaagc taagacatta gcagggcaag
     2881 ggcgaaaatt gaatcttaaa taaggtgatt cagatgaaaa attttaatgt agtaaaagaa
     2941 agtttaagag agttaggaat taaacaagga tttgatcttt atgagaaagc cacaactgaa
     3001 aaattgaata gtgaagatcc tcttgactta caatggcttt ctaactattc atctgattgg
     3061 aatgatgaat tagaagaaga ctttgattct ttttttcagc atatgaagga atatcaatat
     3121 gctattgaca atgaagacat taaatctgca tgtagttcac tatgtgaagc tatgctctat
     3181 gttggtaata ttaaaaattt ttttgagttt ctcaaaagcg atatgattag actgttgaga
     3241 ggtgaaagta aaacaacaga ctttcaatgg ccgcaatttg atgaatagca gcaagctgta
     3301 gcctgcatga aacctaaaat ccatgcgtaa ggtgtgtgct tcagcacgca cgcgttccat
     3361 gatttacggc tcaatgccgt ctgaaaagct cacaattttt cagacggcat ttgttatgca
     3421 agtaaatatt cagattccct atatactgcc cagatgcgtg cgtgctgaag acacccccta
     3481 cgcttgctat ttgaaacagc tccaagtcac caaagacgtc aactggaacc aggtacaact
     3541 ggcgtacgac aaatgggact ataaacagga aggcttaacc ggagccggag cagcgattat
     3601 tgcgctggct gttaccgtgg ttactgcggg cgcgggagcc ggagccgcac tgggcttaaa
     3661 cggcgcggcc gcagcggcaa ccgatgccgc attcgcctcg ctggccagcc aggcttccgt
     3721 atcgctcatc aacaacaaag gcaatatcgg taacaccctg aaagagctgg gcagaagcag
     3781 cacggtgaaa aatctgatgg ttgccgtcgc taccgcaggc gtagccgaca aaatcggtgc
     3841 ttcggcactg aacaatgtca gcgataagca gtggatcaac aacctgaccg tcaacct
//
LOCUS       DAXHRP010000176         3864 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.176, whole genome shotgun sequence.
ACCESSION   DAXHRP010000176 DAXHRP010000000
VERSION     DAXHRP010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.176"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(169..381)
                     /locus_tag="ACFM72_001906"
     CDS             complement(169..381)
                     /locus_tag="ACFM72_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258425.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(458..817)
                     /locus_tag="ACFM72_001907"
     CDS             complement(458..817)
                     /locus_tag="ACFM72_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC6258426.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(822..2318)
                     /locus_tag="ACFM72_001908"
     CDS             complement(822..2318)
                     /locus_tag="ACFM72_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC6258427.1"
                     /translation="MKLSIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDNHDSRSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKINTVPQAPFSDRWLKENAGAASGFLSRADEAGKLIWENDPNQNW
                     WGNRMDDIRGIIQGAANPFLTGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAAATALQDSAFAVKDSINSARQWADAHPNITATAQTALSVAEAAGTVWGGKKV
                     ELNPTKWDWVKNTDYKTPAARPMQTLDGEMAGGNKPPKSITSGGKANAATYPQLVNQL
                     TGQNLKNIAAQDPRLSLALHKSEKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLS
                     IDGTRQYRPPTEKNSQFATTGIQANFETYTIDSNGKRNKIKNGHLNIR"
     gene            complement(2358..2483)
                     /locus_tag="ACFM72_001909"
                     /pseudo
     CDS             complement(2358..2483)
                     /locus_tag="ACFM72_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            complement(2812..3222)
                     /locus_tag="ACFM72_001910"
     CDS             complement(2812..3222)
                     /locus_tag="ACFM72_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258428.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIKGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(3226..>3864)
                     /locus_tag="ACFM72_001911"
     CDS             complement(3226..>3864)
                     /locus_tag="ACFM72_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218290.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC6258429.1"
                     /translation="SARQWADAHPNITATAQTALAVAEAAGTVWRGKKVNLNPTKWDW
                     VKNTGYKTPAARPMQTLDGEMAGGNKPAKQATPNGKAGVSTQQSLQNSLVPQKNYTHT
                     TYNGGSAITDGKYITDPLSMVRHKPDASSLDKIDSKSLFKSDVDAEKATLDAARYADK
                     HNLWDSQNKAKVPTNDVVGYTDGKPTHIINIYRRKPNKDGFRPVHGTPGKER"
BASE COUNT         1049 a          812 c          687 g         1316 t
ORIGIN      
        1 atcatccata cggttagccc accaattttt attggggtcg ttttcccata tcagttttcc
       61 tgcttcatca gcacagttag gattggcatt gatgcccacc cagtttcagg cagcctgaaa
      121 aggattttta atatacggca aaaggtgggc aacaagtgcc caccttacct agctaacatt
      181 tatcccaagt atcatatatt tttttaagtt ctttatccaa agaaagaact ttattttttc
      241 aacaccatga attatctcaa aatctctaca atccacgcat acgcctgaat aaatttctcc
      301 tacaattgct tgaataatat acaactcatc tttatcgaga ctaattttaa ctgaactctc
      361 ttcaaaatta attaatttca tgaataattc cttttatttt aattcgtcat caaaataccg
      421 tttgcctgtt tttggtctaa atgctgtccc accatcttta gtcttggata tttagattat
      481 aatcgtcaaa ttcccagtca aaatattttg ccaaatttga tatagactta tcttcagacg
      541 ttgaattaca tatttccaat atatcattta tcaattttaa tatgtgttca atattaaaac
      601 ggtttgtaac aattgagttt tttaatgaca tcggtctatg tatatttgaa agtaaccatt
      661 cagtgctata tatataaaca taaaaataat cagcaccatt actttcatca aaacctattg
      721 ataatgtcaa aagtatacaa aaattttcta acttgtcttg tgggaaatct tccaaatcaa
      781 agtcagaaca atcataattt tttaatttta atctcatata attacctaat atttaaatgt
      841 ccatttttaa ttttattcct ttttccattt gaatcaatag tataagtttc aaaatttgct
      901 tgaatacctg tagttgcaaa ttgtgaattt ttttctgttg gtggccgata ttgtcgagtg
      961 ccatctatac ttaaccatcc gcctccacta gtttgtcttg caccctcacc aacccaaatt
     1021 ttacctagcc tatctgcctc ttcataagtt gcagttccta ttggaaaatt tttttcactc
     1081 ttatgaagag ctagactcaa tcttggatct tgagccgcaa tgttttttaa gttttgccca
     1141 gttaattgat taactaattg aggataagtt gcagcattgg cttttcctcc agacgttata
     1201 gatttaggcg gtttattccc accggccatt tccccatcta aagtctgcat aggtcgggca
     1261 gcaggtgttt tataatcggt atttttaacc caatcccatt tagtcgggtt aagttctact
     1321 tttttaccgc cccaaaccgt acctgcggcc tctgctacgg aaagggcagt ttgggctgtt
     1381 gcagttatat tcggatgggc atcagcccat tgtctggcag agttgatact gtcttttacc
     1441 gcaaaagcac tgtcttgtaa tgcggttgcg gccgcaagtt gtgcttccgg acttaaattt
     1501 cctaaattgt gaataccctg taaagttttc cgtgctgccg cataggttac cgggtttacc
     1561 gcactgtctg taattgcccc aactcccaat ccctgaaaac ccgttagaaa aggattggct
     1621 gcaccttgga tgatgccgcg aatatcatcc atacggttac cccaccaatt ttgattgggg
     1681 tcgttttccc atatcagttt tcctgcttca tccgcacggc tgagaaaacc agaggcggca
     1741 ccggcatttt cttttagcca acggtctgaa aatggggctt gcggaacagt gtttatcttt
     1801 gtttttgtag aagttccttt gacatagtag ctgtatatat cccttgctcc tccggggggc
     1861 ggataatcgc tgccttgcgg tccgtcatat ccatcctccg gatggatttc cgaccctgtc
     1921 cgatgaagtt ggtaaacagt aaaaccaccg tctacaccgc cgctgaaatc agaagtgctt
     1981 cttgaatcat gattatcgaa cggactgtgt acttcatgtc cgtgccctga aaaatgggtt
     2041 tcatagccga taacaccttc aaatcctgtc cgttcgtgtg taataggcag tatggggccg
     2101 accgcagttg catcaaatgt ttggacggcg taaacccgat ttttaacact gccgcgacca
     2161 tcaccgaaca gatggtattt accacccggt tcgtagtgtt ttgcctgcat atcatcgcgt
     2221 aaacgggcat ccaaaccgtt cgcatgacta atggggattt gcagcaacga tattgctgct
     2281 gcaaacagca tcatgaattt ttgaatagac aatttcattt tgttttcctt ggtagcaagc
     2341 ggttatggta gtgtgaatca aggttgccct tgtctatgtt gtcgcactac ttcatcgctg
     2401 tatccatacc cctcatgact gttatcagtc tctacggatg gggcggagtt acccgtatga
     2461 ttgccgtatg gtcggatact tgtatccgac aaaaatattt gacgcgtcta tcgtttccga
     2521 aatgccgctg ttgaaaaacg tcggattcga gaatccgacc tacggttgct gaacaatgtt
     2581 ttgtagaact tgctcaaaat ccatgtttcg ccattttcct ttatatatac ctaatgcagc
     2641 acgggttacg atttcgttta agtcataaat agccatttac gtcctctgct aattttcagc
     2701 gagtagattg ggttaccaaa cccaacaaaa aagcagcctg aaaaatttca ggatgcttgt
     2761 tttatgtttt ttatcaatga attaggtttt aatccagcct gcgcttgcta gttaaacagt
     2821 atttacataa aaatcttgca ctgaacaaac aagcgtatca tgttcatcat gaaatgatgg
     2881 gcataacgtt aatctacaaa tgtttacatt taaagatatt ttttcagttt caatattttt
     2941 aatttgtaag gttaatacat gaggatattt gtgatatagc tgatttttta attgttcgtt
     3001 gtctaatata gcaaaaggta attttgcaca caaataacca ataactttgt ttttatgaaa
     3061 aaaaactatc caattttcaa ttccttcatc ccaatcaaaa gtaaaatccg ttccttttat
     3121 gataaattta gcacaagata ttaaatctaa cttaacccaa gtggatttat acagactcaa
     3181 tgctgatgaa gttataatat tatctaaatt ataaattttc ataaatcaac gttccttacc
     3241 tggtgttcca tgcacaggtc taaacccatc tttattcggc tttctacgat aaatgttaat
     3301 tatatgtgtc ggttttccgt ctgtatagcc aactacgtcg ttcgttggaa cttttgcctt
     3361 attttgacta tcccataaat tatgtttatc tgcatatcta gcagcatcta atgtagcttt
     3421 ttccgcatca acatctgatt taaataaact tttgctatct atcttgtcta gactagatgc
     3481 atcaggtttg tgtcgtacca tactgagagg gtcagtaata tatttaccat ctgtaatagc
     3541 tgatccacca ttataggtag tatgcgtata atttttttgt ggaacgagac tattttgcaa
     3601 agattgttgt gtagaaacgc cagctttgcc attaggagta gcttgcttcg ctggcttatt
     3661 cccaccggcc atttccccat ctaaagtctg cataggtcgg gcagcaggtg ttttatagcc
     3721 ggtattttta acccaatccc acttggtcgg gttaaggttt acttttttac cgcgccaaac
     3781 cgtacctgcg gcctctgcta cggcaagggc agtttgggct gttgcagtta tattcggatg
     3841 ggcatcagcc cattgtctgg cgga
//
LOCUS       DAXHRP010000177         3861 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.177, whole genome shotgun sequence.
ACCESSION   DAXHRP010000177 DAXHRP010000000
VERSION     DAXHRP010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.177"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="ACFM72_001912"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="ACFM72_001912"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HFC6258430.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLVVNVSDMAAMGAIPRWVLLSAALPELDEVWLKRFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDEVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="ACFM72_001913"
     CDS             1439..1924
                     /locus_tag="ACFM72_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HFC6258431.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACFM72_001914"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACFM72_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HFC6258432.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNELIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
BASE COUNT          787 a          944 c         1079 g         1051 t
ORIGIN      
        1 aaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cctcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcattgtatg ccggatatgg ttttatcatc atcccttttc ggttgaaacc
      241 ccgccagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggc
      301 ggcgtgcagt gcggtacttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggctaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataag
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgcaga tgtcaaacct
      661 gaagacttgg cttggaaggt tttggtcgtc aatgtttcgg atatggcggc gatgggtgcg
      721 ataccgcgtt gggtgttgct gagcgcggcg ttgcccgaat tggatgaggt atggctgaaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcgttgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgaagtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccat ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgc ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgcgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcgaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccaac ggtcgtgcga
     2161 aatcaccatc acgctaccgg caaattccag caatgcgtct tccagcgcgc gcagggtttc
     2221 tacgtcaagg tcattggacg gttcgtccaa cagcaataca ttgccgccgc ccaacaaggt
     2281 tttcgccaag tgcagacgac cgcgttcgcc gccagacaat tgacctgcaa ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgacc
     2401 aacctgcaaa atgtcgcgac cttcggcgat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 ggaatcgggc tgctctttgc ccgcaatcat tttaaacagc gtagatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacgtt cacaaattca atcaattcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaaa tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgt gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgcgttacc gcaacgactg tgccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 cgattccgca tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gcttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattat cgattttggc
     3181 atcccattcc ggcaggcgca gcgcgtcggc ggcgatttcc aattcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg caataatcgc ttccaagcgg ccctgctctt ctgccaacgc
     3301 gtcaaaatcc gcatcaggat tggcgtactc ggcatacact tcttccaaac gtttctgcgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggtttttt ccggatcaag
     3421 ctcaggctct tgcggcaggt agccgatttt gatgccgccc atcggcacgg cttcgccctc
     3481 aaattcctta tccacgcccg ccataatccg cagcacggtg gacttgcccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgctcacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgctta
     3781 tccctttgaa attatataga caaaaaaata ataatgatag gggatcgccg ccccggcaac
     3841 catttcggat tttccaaagc a
//
LOCUS       DAXHRP010000178         3851 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.178, whole genome shotgun sequence.
ACCESSION   DAXHRP010000178 DAXHRP010000000
VERSION     DAXHRP010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.178"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..890
                     /locus_tag="ACFM72_001915"
                     /pseudo
     CDS             1..890
                     /locus_tag="ACFM72_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            895..2079
                     /locus_tag="ACFM72_001916"
                     /pseudo
     CDS             895..2079
                     /locus_tag="ACFM72_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685727.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            2203..3753
                     /locus_tag="ACFM72_001917"
     CDS             2203..3753
                     /locus_tag="ACFM72_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HFC6258433.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQEAGFL
                     TVESHQYERGWFTSTETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAYIETEFKYAPETEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         1065 a          965 c          987 g          834 t
ORIGIN      
        1 ggcaaagcca acgcctttac cgcgccgatt accgtcgtca actacgacga acaagccctc
       61 aacaacaccg aggcgcgtac tttggtggat gccgtagcga aaaaagacgc ttccgtttgg
      121 cagttcggcg gcgaaagcaa cacgctgacc ggattgtatt tcagaggtta tcagcttgat
      181 gcgcgccaat tcagcgtcaa cggtttgaca ggtatgtacg gcacgcaagg cacgaccagc
      241 gtgcaagtcg gctccgcaca actgattcaa ggcgcgtcca ccgccgtaaa cggcatgaac
      301 cctgatggcg cggtatccgg ttccgtcaat atcgaaacca aaaaagccgc tgatgaaggc
      361 aaccgcaaaa tcggtttggc ccggttcggc aacaaccgcg cccaaggtac gttcgacttg
      421 ggccaacgtt tcggcgaaaa caaagcattc ggcgtgcgcg ccaacggcaa actgcgccac
      481 ggcgacaccc cgcgccacgg ttacagcgaa gacaacaaag aatttgcggt aaatgccgac
      541 tatcgcggcg aaacactgcg cgtagcgttc gattccatct acgcaaaacg caaaaccaac
      601 ggcggtcgcg cgcgtatgca ggacattcaa aacgccggcg gacgcttgtc ctgactttgg
      661 gcggacgttt ccaagcggtt gaatacacca ataagaaaaa atcacgcgga acggcagccg
      721 gagctagcaa ggtagaagtg aaggcaaacg gaaatattga gcatcaattg gcatcgttta
      781 cagccgacta tcccaattct tgggagaact ctgccaactt ggatgccaat atcaaagtca
      841 acagcctggc tttgtccgac accttgggct tcgtggataa caaataccgt tggcgcgccc
      901 gatggtaaaa ccaacctgct gccttcttgg aactggcaaa ataccgccgg ccaaaccaat
      961 atgcttacgt ttgaatggga tgcgtttgac aatgcccaaa ttaccggcgg tatcggctac
     1021 aacaaggcgc gttattacgg cacgctgatt tccccgaccg tttgcggtac aagcggtgcg
     1081 agcgaccaaa ccgctacctg ctcaagtgcc aagcaatacc acaccggcac ggcgagcctg
     1141 accgaccaat atttccgcac attgagtatg aacctgaccg cacgcggcga atttgaaacc
     1201 ggtccggtaa cacataactg gagcaccgcg ttcgaccgtg ttatccgcca gcggaaaacc
     1261 attcagagcg gtgatgccaa acgtttcagc ccgatgctga tggcggcgtg ggtgccgcaa
     1321 cctgatttgg ttgtgtacgg caactatatg gaagacttgg agcctgccga tatcaaaacc
     1381 gatgattccg gcgaaacgac aatggcgaaa ccgcgtgtca gccgtcagtt tgaagtgggc
     1441 gtgcgtaaaa actggggcaa tttcgtaacc acgttaaacg cgttccaaat caaacgcccg
     1501 ggctactggc gcggtcagac taataaagat ggcagcctga cctacggcaa taattccgat
     1561 tttgcccgct ataaagcgca aggcggtgcg gccaaagacg aacaaggcat ggaacgcaat
     1621 cgcggtattg agttcaacac ctacgcgaac ttgctcaaca atactttgcg tccgactttg
     1681 ggtctgatgt atctgcaatc gaccgtgaaa gagtatccaa attcacgcga tatgctggtt
     1741 aacggcgtac aagttgccaa cccgcgtgtg attgccaaag cgggcgtgga atgggatacc
     1801 ccgtttgcca aaggtttgac cttgaacggc aacgtttcgt atttcggcaa gtcttaccaa
     1861 gatacgaaaa aacaatacgc cttcccgtct tacactttgg ttgacgtagg cgcgcgctac
     1921 aaaaccaagc ttggcaaaaa cactctgacc gtcagcagct cggtggaaaa cctgttcaac
     1981 aaaaactatt ggcaggtaca gcgcggccaa tacgaccgca gcttcgccgt cgtcggtatg
     2041 ccgcgcactt actggctgaa ggcggaattg gatttctgat ttccctatat ccggaaaatg
     2101 ccgtccgaac aggtttcaga cggtatttct tttaaagaga tatggcggga tacgcttaaa
     2161 taatgctatt ctagcgtctt tgaaacctgc ttgtttgaag tgatgaaaaa acctttgatt
     2221 tcggttgcgg cagcattgct cggcgttgct ttgggcacgc cttattattt gggtgtcaaa
     2281 gccgaagaaa gcttgacgca gcagcaaaaa atattgcagg aagcgggctt cttgaccgtc
     2341 gaatcgcacc aatatgagcg cggctggttt acctctacgg aaacgacggt catccgcttg
     2401 aaaccggagt tgctgaataa tgcccggaaa tacctgccgg acaacctgaa aacagtgttg
     2461 gaacagccgg ttacgctggt aaaccatatc acgcacggcc ctttcgccgg cggattcggc
     2521 acgcaggcgt acattgaaac cgagttcaaa tacgcgcctg aaacggaaaa agttctggaa
     2581 cgcttttttg gaaaacaagt cccggtttcc cttgccaata ccgtttattt taacggcagc
     2641 ggtaaaatgg aagtcagtgt tcccgccttc gattatgaag agctgtcggg catcaggctg
     2701 cactgggaag gattgacggg aaaaacggtt tatcaaaaag gtttcaaaag ctaccgcaac
     2761 agctatgatg cgcccttgtt caaaatcaag ctggcagaca aaggcgatgc cgcgtttgaa
     2821 aaagcgcatt tcgattcgga aacttcagac ggcatcaatc cgcttgcttt gggcagcagc
     2881 aatctgacct tggaaaaatt ctccctagaa tggaaagagg gtgtcgatta caacgtcaag
     2941 ttaaacgaac tggtcaatct tgttaccgat ttgcagattg gcgcgtttat caatcccaac
     3001 ggcagcatcg caccttccaa aatcgaagtc ggcaaactgg ctttttcaac caagaccggg
     3061 gaatcaggcg cgtttatcaa cagtgaaggg cagttccgtt tcgatacact ggtgtacggc
     3121 gatgaaaaat acggcccgct ggacatccat atcgctgccg aacacctcga tgcttctgcc
     3181 ttaaccgtat tgaaacgcaa gtttgcacaa atttccgcca aaaaaatgac cgaggaacaa
     3241 atccgcaatg atttgattgc cgccgtcaaa ggagaggctt ccggactgtt caccaacaat
     3301 cccgtattgg acattaaaac tttccgattc acgctgccat cgggaaaaat cgatgtgggc
     3361 ggaaaaatca tgtttaaaga catgaagaag gaagatttga atcaattggg tttgatgctg
     3421 aagaaaaccg aagccgacat cagaatgagt attccccaaa aaatgctgga agacttggcg
     3481 gtcagtcaag caggcaatat tttcagcgtc aatgccgaag atgaggcgga aggcagggca
     3541 agtcttgacg acatcaacga gaccttgcgc ctgatggtgg acagtacggt tcagagtatg
     3601 gcaagggaaa aatatctgac tttgaacggc gaccagattg atactgccat ttctctgaaa
     3661 aacaatcagt tgaaattgaa cggtaaaacg ttgcaaaacg aaccggagcc ggattttgat
     3721 gaaggcggta tggtttcaga gccgcagcag taatgggtca aatgccgtct gaaatgttca
     3781 ggcggcattt tgttgtattg gaaactgccg ttttcaacca ttcctttaga taagccgtgt
     3841 cggattcgtt t
//
LOCUS       DAXHRP010000179         3818 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.179, whole genome shotgun sequence.
ACCESSION   DAXHRP010000179 DAXHRP010000000
VERSION     DAXHRP010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.179"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(32..1942)
                     /locus_tag="ACFM72_001918"
     CDS             complement(32..1942)
                     /locus_tag="ACFM72_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC6258434.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGLQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFHPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     VFEGQGRLKEYIGGYQDYIDAKSREDKIQTASAPKASDAEPAKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINTQLSYPEIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKRNGNAV"
     gene            complement(1961..2605)
                     /locus_tag="ACFM72_001919"
     CDS             complement(1961..2605)
                     /locus_tag="ACFM72_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC6258435.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(2770..3588)
                     /gene="opc"
                     /locus_tag="ACFM72_001920"
                     /gene_synonym="opcA"
     CDS             complement(2770..3588)
                     /gene="opc"
                     /locus_tag="ACFM72_001920"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HFC6258436.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHISVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTKSGDVSLTIPKTSIREYGLRVGIKF"
BASE COUNT          936 a          866 c          957 g         1059 t
ORIGIN      
        1 cgtttgaaca tttttttctt cctgtttgat ttcagacggc attgccgttc cgtttggttt
       61 ccagcagctc ccagcgttcc agcttttcca aaagcagcat ttcgatttct tcggcgcggt
      121 tttgcaatgc acctgctttt tcgtaatctt tgaaaatttc aggataggaa agttgggtat
      181 tgatttcagc ctgctcggct tccaaagcgg cgatttcgtc gggcagggca tcgagttcgc
      241 gctgctcttt gtaggacagt ttgaccgtgc ggttggcttt gggtttttct ttggcgggtt
      301 cggcatcgga tgctttgggt gcggatgccg tctgaatttt atcttcccgc gattttgcgt
      361 cgatatagtc ctgatagccg ccgatgtatt ctttcagacg gccttgtcct tcgaaaacaa
      421 tgctttgggt aattacgtta tcaaggaaca tacggtcgtg cgagacaagg aatactgtgc
      481 cttgataatc gcgcaacagg tcttcgagca gctcttgggt gtcgatgtct aagtcgttgg
      541 tcggttcgtc caagaccagg atattggcag gacgggtaaa gagttttgcc agcaaaaggc
      601 ggttgcgttc tccgccggag agcgatgaaa cagggctttg cgcacgggct ggatggaaca
      661 ggaaatcttc caaatagctc atgacgtgtt ttttcttacc gccgacttca acgtaatcgt
      721 ttccctgtcc gagggtgtaa aacacggtgt cgttttcatt caacgcgctg cggaactggt
      781 cgaaataggc gacttcctgc ttactgccga tacggattct gccgtaggtc ggctgcaatt
      841 cgcccaaaat cagcttaagg aaggtggttt tgccgatgcc gttggggccg attaggccga
      901 ttttgtcgcc gcgctgcaag atagcggaga atttgtccat aatgactttg ccgccatagg
      961 caaacgaagc gtgttccaat tcggcgatga ttttgccact tttctcaccg ctatcgagct
     1021 tgaagttgac ttgtccctgt acgttgcggc gttctgcacg ctggcggcgc agctcttcca
     1081 aacggcgcac gcggccttcg ttgcgggtac ggcgcgcttc gatgcctttg cgtatccatg
     1141 cttcttcctg tgcgtggaat ttgtcaaaga ggcggttgtg ttccgcttcg actgccaact
     1201 cttgcgcttt tttctcgctg tatttagaga acgagccggg ataggaacgc aaaataccgc
     1261 gatcgagttc gacaatccgc gtggcgatat tgtccaaaaa acggcggtcg tgggtaatca
     1321 caaccaagct gccttcaaac gctttgagca gattttccag ccaaataatc gcgtcgatat
     1381 ccaaatggtt ggtcggctcg tccagcagca atacgtcggg cttttgcacc caagcctgag
     1441 ccaaggcgac gcgctttttc tgaccgccgg aaaggttgcc gattttttca ttttccggca
     1501 aaccgagttc ccccaaagtc tgcttgactg ccgcatccag tttccagccg tccttcgctt
     1561 cgatttcaag ttgcaattcg ttgagttctt tcaacaaagc ctcactcgaa ccattttcca
     1621 actcatggct gacatgatga taacggcgca ataaatcacg aatttcgccc aaaccttcgg
     1681 caacggtatc aaatacggtt gcgtccttat caaaaaagga ttcctgcggt acataaacga
     1741 ttttgaggtt gttttgaaca ataatctgcc cgtcgtcgag cttttgcaaa ccggcgagga
     1801 tttttaaaaa cgaagacttg cctgcgccgt tgcgtccgat taagccgact ttttcgccgc
     1861 tgtcgagttg aaaagaagtt ttgtcgagca aggcaacgtg gccgatggca aaagaagcgt
     1921 tttctacaga taatatattc atgatacaaa ttctcaacag ttaccgtttg gattttaccg
     1981 caagtttggc gcgggcaatt tcaaccgcac ccggcaggac ggaaacaata atgatgccgc
     2041 ccatcaccaa gcccagattg ttttttacga cggggaagtt ggcaaagaaa tagcccgcgt
     2101 aagaaaacag gataacccac aacaagccac cgatgatgtt gtagcggata aatttggcat
     2161 agtgcatttt ccccataccg gcgacgaagg gggcgaaggt gcggacgatg ggcataaaac
     2221 gggcaatgat gatggttttg ccgccgtgtt tttcgtaaaa acggtgggtt ttatcgagat
     2281 attcacgtcg gaagatttta gaatcggggt tggcgaacag cctgccgccg aaatatttgc
     2341 cgacggtaaa attgagcgcg tcgccgagta tggcggcaag gcttaataat gcaaccatca
     2401 aatgaatatc cataccgccc agcgcggcaa tcccgccggc ggcaaacagc agcgaatcgc
     2461 cgggcagtaa gggcgtaaca atcaggccgg tttcgcaaaa aacaatcaaa aacagaatcg
     2521 cataaatcca cacaccgtat tgcgccgaca gcgcgagcag gtgttggtcg atatggagga
     2581 tgaagtcgat ggcggaggca agcacggcgc gttcctaaaa aaaacaaacc gcgtatttta
     2641 accgattgga aaaatgccgt ctgaaaagtt tcagacggca tcggctattc aaattcattt
     2701 cacgtaaaaa ccgcaaacca aaatagtttg cggtttggca tttaaagtga caatgatgat
     2761 ttcaaatcat cagaatttta tgccgacgcg caagccgtat tcacgaatac tggttttcgg
     2821 gatggtgagc gatacgtcgc cactcttggt tgttacacta aactcgccgg attctttgta
     2881 agtgcgttgt ttgtagaacg gccccgcctc gatgctggcg gattcgccca gttttttacc
     2941 aatatttgca cccaatccaa agccccagcc gttggttttt tgattgatgt cttttttgag
     3001 attggtaacg ccggtgttta atttatagcg ggaattgagg tcaaatttca cttcagacca
     3061 agggttgata taccagccgt tacccagttg ggaaagcaaa tccgcgtgaa ctttggctaa
     3121 ccacgactga cggctgctgt gaagcgtatg cttggtggtt ttaatgctgt cttttgaaga
     3181 ttcaaaaccc aagccggcac ccacacggaa atttaaagaa tcacttaacg tttgggtgta
     3241 ggtgtagcct gtgtaaagat cgatacggtt ttcaggaacg ccggtgggca gttttacatt
     3301 tttagtctta cccagcttgt tctcatctgt ttccaaatta ataatatttt ttttgctgcg
     3361 cccgaaaccg gcttccaagc ggatgccttg gttggcatca aaaggaatat cagcacgcac
     3421 gctgatgtgt ttggcagctt tgtgtttttc tttcaggaaa gcacgagttg aagaaatgga
     3481 agagaggtcg gtgtggacgg taaactcatt agcggtttga agctcttgtg cagcggcggc
     3541 agtaccggtc agggcaatca tggcacatgt aaaaactgtt tttttcatag ttaaaacctc
     3601 taaaatttgg attgtagtcg gatatggtaa cataacgtaa ataatcgtta cgcttacaat
     3661 tatattctta agctttcggg ggggttacat atattaataa aaattaacaa atagttattt
     3721 gtttacaacg aattgttatt ctcacttggt tttctgtttt ttatgggaat gacgaaattt
     3781 tagtttgtgt gtatttatcg gaaaaacaga aacccgcc
//
LOCUS       DAXHRP010000180         3726 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.180, whole genome shotgun sequence.
ACCESSION   DAXHRP010000180 DAXHRP010000000
VERSION     DAXHRP010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.180"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(420..505)
                     /locus_tag="ACFM72_001921"
     tRNA            complement(420..505)
                     /locus_tag="ACFM72_001921"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(469..471),aa:Leu,seq:gag)
     gene            complement(519..869)
                     /gene="secG"
                     /locus_tag="ACFM72_001922"
     CDS             complement(519..869)
                     /gene="secG"
                     /locus_tag="ACFM72_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HFC6258437.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(876..1649)
                     /gene="tpiA"
                     /locus_tag="ACFM72_001923"
     CDS             complement(876..1649)
                     /gene="tpiA"
                     /locus_tag="ACFM72_001923"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HFC6258438.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            1809..2336
                     /locus_tag="ACFM72_001924"
     CDS             1809..2336
                     /locus_tag="ACFM72_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HFC6258439.1"
                     /translation="MYATIGDVMHALHFSASDKAALYREVLPQIESVVADETDWVANL
                     ANTAAVLKEAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGT
                     VVVGDVDAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGEL
                     AKILEKRFEASRQAA"
     gene            2438..3094
                     /locus_tag="ACFM72_001925"
     CDS             2438..3094
                     /locus_tag="ACFM72_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HFC6258440.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGKV
                     VSDDIDAEQQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            3174..3497
                     /locus_tag="ACFM72_001926"
     CDS             3174..3497
                     /locus_tag="ACFM72_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC6258441.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEEAAICSLPDALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
BASE COUNT          737 a          788 c         1185 g         1016 t
ORIGIN      
        1 atatgcttat ttatctaact tttccccggt aacaaggtaa caactaaggg tatcgcttcc
       61 tagtataggt tttttccaaa aacccaaaaa aaaccgccct gcatcttgga cggtttcccc
      121 cttgttccct acgtcttggc agtattcccc gcaagctctt ttccgcttgg cattcctgat
      181 ttggcggtcg ttcagcttta tttttgcggt attttttcga ggtatttttc agataccgca
      241 aaagataccg taaattttag gttacttcaa ttagggcgga ttggacggga ttgcactgtc
      301 aggaaggggg acggcaggat aacaatcagc ctgaaatcct tgtattgatt ggaattggtt
      361 gacagcgttg gatgggattg aacaaaaaac gcctgaaatt ttcaggcgtt tttgtgtgtt
      421 ggtgccgaca gcgagatttg aactcgcaca gcctacggcc actaccccct caagatagcg
      481 tgtctaccaa tttcaccatg tcggcatttg aaaaactgtt atttctgctg ctgaggaaca
      541 ggggcagaag gttcggtatt gcttacgggt ttgggtgctt gctgagtttg ttgtacgttg
      601 ctgaagtcca aaccgtgttt tgtcgtgtgg gtgtgaatat acaccatagc catgcaggtt
      661 gcaaagaaaa atgttgctgc aacggcggtc gagcggctga ggaagttagc gttgccggca
      721 gagccgaata cgccttgcgc gctgccgctt cccgatccga aagtcgcgcc ggcatccgcg
      781 cctttgccgt gttggagcaa tactaacacg atgacggcca aagcggaaat tatattaaca
      841 atccaaatta gggttttgaa ggcttccata tttttctacg cattttgtgc ggcactgatg
      901 atggcggtaa aggagtcgta cgacaatgac gcgccgccga cgagtgcgcc gtccacataa
      961 ggtactgcga agatgtcggc cgcgttgtcc gctttcacac ttccgccgta aaggacacgg
     1021 attttaacat cgcttccgca caaagacaag atttctttgt agatgaatgc gtgcatatcg
     1081 gcaatctgtt cgacggtggc gactttgccg gtgccgatcg cccagacggg ttcgtaggcg
     1141 acggcgatgt ttttggtatc cagcccttgc aggatggaaa gctgatgggc gatgacttcg
     1201 tgttctttgc cggcttcgcg ctcttcgagg ctttcgccga cgcacaataa cgggatgagt
     1261 ccgacgttga ggacgttttc cattttgcgg cgttggattt cgtttttttc gccgaaataa
     1321 aggctgcgtt cggagtgtcc gatgaggacg atgtctgtgc cggtgtcggc gagcatttcg
     1381 gcggacactt cgccggtgta cgcgccgttg tcggggaagc ggctcacgtc ttgggcgcag
     1441 gtgaggatgc ggttgtttaa gacgatttgc atggcgttgt gcagttgcag caggtaaacg
     1501 gtcggggcgg cgagtccgat gaggacgcgt tcggcggtgg ggaggatgcg gaagcggtgc
     1561 atgagcgaat tgttgttctg gagccggccg ttcattttcc agttgccgat gacccatttt
     1621 tgatcccaca ttccgatttg gtgatacatc ttttttgctc cgtgtcgtgt tttttctgtc
     1681 tgccgcgtgt ggcgcgttgc aatgtgaagt ttagtggata tgcggcgggt tcgcaacttg
     1741 gggcgggcgg ctgcgggggc ggtttggaat gttgtttcgg gcaggttgtt ttataatggc
     1801 cgcctgatat gtatgcaact ataggagatg tgatgcacgc gcttcatttt tcggcttcgg
     1861 acaaggccgc gctttatcgg gaggtgttgc cgcagattga gtctgtggtg gcggacgaga
     1921 cggattgggt ggcgaatttg gcgaacacgg cggcggtttt gaaggaggcg ttcggttggt
     1981 tttgggtggg tttttatttg gtcgatacgc gttcggacga attggttttg gcaccgtttc
     2041 aggggccttt ggcgtgtacg cggattccgt tcggtcgcgg ggtgtgcggt caggcttggg
     2101 cgaagggcgg gacggtggtc gtcggggatg tggacgcgca tcccgaccat attgcctgtt
     2161 cgtctttgtc gcgttcggag attgtcgtgc cgctgttttc agacggccgc tgtatcggcg
     2221 tgttggacgc ggacagcgaa catttggcgc agtttgatga gacagatgct ttgtatttgg
     2281 gcgaactggc gaagattttg gagaagcggt ttgaggcttc gcgccaggcg gcttgagtga
     2341 tggaaagggg cgggcggcgc gtgccgaagt tggcgcggcg ggagtgtggt tttataatgc
     2401 ctgctattgt tggaacaatt atttgacgga gcactaaatg gattttgaaa aagcgcggtt
     2461 caatatggtc gaacagcaaa tccgtccttg ggatgtattg gattttgacg ttttggacgc
     2521 tttggcggag attccgcgcg agctttttgt cgatgaggac ttgcagggtt tggcgtatgc
     2581 ggatatggcg ctgccgcttg ccaacgggca taagatgctg gagccgaaag tcgtggcgcg
     2641 gctggcgcag ggcttgaagc tgacgaaaaa cgatacggtt ttggaaatcg gcacgggttc
     2701 gggctatgcg accgcgcttt tggcaaaatt ggcgggcaaa gtggtttcgg acgatatcga
     2761 tgccgaacag caaaagcgcg ccaaagcggt tttggacggc ttgtctttgg aaaacatcga
     2821 ttatgtgcaa aataacgggt tgaccgaact ttccgcaggt gcgccgtttg atgcggttta
     2881 tgtcggcggt gcggtaaacc ttgtgcctga agtgttgaaa gaacagttga aagatggcgg
     2941 acgcatggtg gttatcgtag gccgcaagcc tgttcagcgc gcgcttttga ttacgcgcaa
     3001 gggcgatgtg tttgaagaga aggtgctgtt cgataccttg gtggcgcatt tggatgataa
     3061 ggatgccgat ccgtttggcg gttttcagtt ttgatgttcg gattgcgatg ccgtctgaaa
     3121 gcggatttgg ggcttcagac ggcattttgc ttggtttttt tgggattttt gcgatggata
     3181 ttgtgcaact tgggtcggcg gaattgaagg cgtggatgga cgaagggcgg atgttttgtt
     3241 tgttggacgt gcgtacggat gaagaagcgg cgatttgttc gctgcccgat gcgctgcata
     3301 tcccgatgaa tctgattccg ctgcggcaga acgagctgcc ggatgatgtg ccgcttgtgg
     3361 tgtattgcca ccacggtatc cgcagcctgc atacggcgat gtatttggcg gacgcgggtt
     3421 ttgaaaacct gtacaacctt cagggcggca tcgatgcatg ggcggccgag attgacggca
     3481 acatgatgcg ttattgaggc aggcatttca gacggcattc cttaaatgcg tgtacctgtg
     3541 gtgttccaaa aggtcgtctg aaagtgcagc ttctgcgaag ctaaagcgcg gtatcaacga
     3601 agttaaaatt tgcctgaacc ttaaaggcag cctgcacccc aatcccctct cccgtgggag
     3661 agggctagga cgaggctggc aaactgaagg tttgcttggg cggcattttc aatgtgcagg
     3721 ctgctt
//
LOCUS       DAXHRP010000181         3693 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.181, whole genome shotgun sequence.
ACCESSION   DAXHRP010000181 DAXHRP010000000
VERSION     DAXHRP010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3693
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.181"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            60..689
                     /locus_tag="ACFM72_001927"
     CDS             60..689
                     /locus_tag="ACFM72_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HFC6258442.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            864..3241
                     /gene="hmbR"
                     /locus_tag="ACFM72_001928"
                     /pseudo
     CDS             864..3241
                     /gene="hmbR"
                     /locus_tag="ACFM72_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
     gene            complement(3449..3571)
                     /locus_tag="ACFM72_001929"
                     /pseudo
     CDS             complement(3449..3571)
                     /locus_tag="ACFM72_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
BASE COUNT          997 a          931 c          936 g          829 t
ORIGIN      
        1 gggcaagtgc ggattttgcc cgcaccgcat ccttatccct taccgacaaa ggaaaaaata
       61 tgagtgaaac cgaaaatcaa gcattgacat ttgccaaacg cttgaaggcg gataccacgg
      121 cggttcacga cagcgtggat aacctcgtta tgtctgtcca accgtttgtc agcaaagaaa
      181 actacatcaa atttttgaaa ctccaatccg ttttccacaa ggctgtcgac cacatctata
      241 aagatgccga attaaacaaa gccattcccg agctggaata catggcgcga tacgatgccg
      301 taacgcaaga ccttgcagat ttgggtgaca aaccttacga atacggcaaa ccgctgccgc
      361 atgaaaccgg caacaaagca atcggctggc tttattgcgc cgaaggatcc aatttgggcg
      421 cggcattttt gttcaaacac gcccaaaaac tcgattacaa cggcgaacac ggcgcgcgcc
      481 acctcgcacc ccatcccgac gggcgcggca aacactggcg cgctttcgtc gagcatctga
      541 acgctttgaa cctgactccc gaagccgaag cggaagccat ccaaggcgcg cgcgaagcct
      601 ttgcattcta caaagtcgtg ttgcgcgaaa ccttcggctt ggcagccgat gccgaagcac
      661 cggaaggaat gatgccgcac aggcactaaa aaataatcga accaaataaa caaggtctcg
      721 gcatagctgt ttgcagggac ctttaattac acggcgcggc tttgtttaca tggattactg
      781 tcttattaaa tattaatgat tatcataaaa tctattattc gctaaccgat ggatgaacaa
      841 tccatacatc ttgagttgat aatatgaaac cattacaaat gctccctatc gccgcgctgg
      901 tcggcagtat tttcggcaat ccggtcttgg cagcagatga agctgcaact gaaaccacac
      961 ccgttaaggc agagataaaa gcagtgcgcg ttaaaggtca gcgcaatgcg cctgcggctg
     1021 tggaacgcgt caaccttaac cgtatcaaac aagaaatgat acgcgacaat aaagacttgg
     1081 tgcgctattc caccgatgtc ggcttgagcg acagcggccg ccatcaaaaa ggctttgctg
     1141 ttcgcggcgt ggaaggcaac cgtgtcggcg tgagcataga cggtgtaaac ctgcctgatt
     1201 ctgaagaaaa ctcgctgtac gcccgttatg gcaacttcaa cagctcgcgt ttgtctatcg
     1261 accccgaact cgtgcgcaac atcgaaatcg tgaagggcgc agactctttc aataccggca
     1321 gtggtgcatt gggcggcggt gtgaattacc aaacgctgca aggccgtgat ttgctgttgg
     1381 acgacaggca attcggcgtg atgatgaaaa acggttacag cacgcgtaac cgtgaatgga
     1441 caaatactct cggtttcggt gtgagtaacg accgcgtgga tgctgctttg ctgtattcgc
     1501 aacgtcgcgg tcatgaaacc gaaagtgcgg gaaaccgagg ctatgctgtg gaaggggaag
     1561 gcagtggcgc gaatatccgt ggttcggcac gcggtatccc tgattcgtcc aaacacaaat
     1621 accacagctt tttgggtaag attgcttacc aaattaacga taaccaccgc atcggcgcat
     1681 cgcttaacgg ccagcaggga cataattaca cggttgaaga gtcttataac ctgaccgctt
     1741 cttcctggcg cgaagccgat gacgtaaaca gacggcgcaa tgccaacctc ttttacgaat
     1801 ggatgcctga ttcaaattgg ttgtcgtctt tgaaggcgga cttcgattat cagaaaacca
     1861 aagtggcggc ggttaacaac aaaggctcgt tcccgatgga ttattccacc tggacgcgca
     1921 actataatca gaaggatttg gacgaaatat acaaccgcag catggacacc cgattcaaac
     1981 gttttacttt gcgtttggac agccatccgt tgcaactcgg gggggggggc gacaccgcct
     2041 gtcgtttaaa actttcgtca gccgccgtga ttttgaaaac ctaaaccgcg acgattatta
     2101 cttcagcggc cgtgttgttc gaaccaccag cagtatccag catccggtga aaaccaccaa
     2161 ctacggtttc tcactgtctg accaaattca atggaacgac gtgttcagta gccgcgcagg
     2221 tatccgttac gaccacacca aaatgacgcc tcaggaattg aatgccgagt gtcatgcttg
     2281 tgacaaaaca ccacctgcag ccaacactta taaaggctgg agcggttttg tcggcttggc
     2341 ggcgcaactg aatcaggctt ggcgtgtcgg ttacgacatt acttccggct accgtgtccc
     2401 caatgcgtcc gaagtgtatt tcacttacaa ccacggttcg ggtaattggc tgcccaatcc
     2461 caacctgaaa gccgagcgca gcaccaccca caccctgtct ctgcaaggcc gcagcgaaaa
     2521 aggcatgctg gatgccaacc tgtatcaaag caattaccgc aatttcctgt ctgaagagca
     2581 gaagctgacc accagcggca ctcccggctg tactgaggaa aatgcttact acggtatatg
     2641 cagcgacccc tacaaagaaa aactggattg gcagatgaaa aatatcgaca aggccagaat
     2701 ccgcggtatc gagctgacag gccgtctgaa tgtggacaaa gtagcgtctt ttgttcctga
     2761 gggttggaaa ctgttcggct cgctgggtta tgcgaaaagc aaactgtcgg gcgacaacag
     2821 cctgctgtcc acacagccgc tgaaagtgat tgccggtatc gactatgaaa gtccgagcga
     2881 aaaatggggc gtattctccc gcctgaccta tctaggcgcg aaaaaggtca aagacgcgca
     2941 atacaccgtt tatgaaaaca agggctgggg tacgcctttg cagaaaaagg taaaagatta
     3001 cccgtggctg aacaagtcgg cttatgtgtt tgatatgtac ggcttctaca aaccggctaa
     3061 aaacctgact ttgcgtgcag gcgtgtacaa cctgttcaac cgcaaataca ccacttggga
     3121 ttccctgcgc ggtttatata gctacagcac caccaatgcg gtcgaccgcg atggcaaagg
     3181 cttagaccgc taccgcgccc caggccgcaa ttacgccgta tcgctggaat ggaagtttta
     3241 atctggtatt attgaattaa tcgccttgtt gaaaattaaa gccgtccgaa ttgtgttcaa
     3301 gaattcattc ggacggcttt ttaccgtaaa tctgtgtgat ggggttttat attgatacag
     3361 tatccgaact caggcagggg gtaatgttgc aggattaaaa atgccgtctg aaaaatgttt
     3421 cagacggcat tttttggttg ccgatatgtt aacggacgac gttggcgcgc atgaccacgc
     3481 ggacgtggaa cgagcctgcc tgacagtcgt attgtccgcc ttgcagcggc tgcttgtcga
     3541 agtagctgtg gaagccggta acgccgcgtc cgcaagggtg gcggcagatg ccgcattgtg
     3601 tttataatgc cgtgtcagac gtttgattta tgggaaaata atgatgctta ccaatcagga
     3661 agtaaccggt gtcaaactgg gataccgcaa agc
//
LOCUS       DAXHRP010000182         3682 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.182, whole genome shotgun sequence.
ACCESSION   DAXHRP010000182 DAXHRP010000000
VERSION     DAXHRP010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.182"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            207..1328
                     /gene="dnaJ"
                     /locus_tag="ACFM72_001930"
     CDS             207..1328
                     /gene="dnaJ"
                     /locus_tag="ACFM72_001930"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HFC6258443.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKDAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1524..3542
                     /locus_tag="ACFM72_001931"
     CDS             1524..3542
                     /locus_tag="ACFM72_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HFC6258444.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIVIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGK"
     gene            complement(3586..>3682)
                     /locus_tag="ACFM72_001932"
     CDS             complement(3586..>3682)
                     /locus_tag="ACFM72_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC6258445.1"
                     /translation="WPLQTAPLLSPKDLAGKTWAQAEKLRLPLYR"
BASE COUNT          779 a          825 c         1098 g          980 t
ORIGIN      
        1 ataacaaaaa cacttcatgg cggttggttt tatgcctgtc taagtttttg tgtcgtgcat
       61 acctgaagat ttcagacggc atcggtttat gctgtctgaa aagtgtattc cgtttcagtt
      121 tgtaagctat ggcagtctgt ttgtcttgtg ttttgcgcaa ttgcccttat tttgagccgt
      181 gattttattt tgaattagat gaaaaaatga gtaatcaaga tttttatgcg acgctgggtg
      241 tggcaagaac agctaccgat gatgagatta aaaaagctta ccgtaaattg gcgatgaaat
      301 accatcccga ccgcaatcct gacaacaaag atgcggaaga gaagtttaaa gaagtacaaa
      361 aggcgtatga aactttgtcc gacaaggaaa agcgcgctat gtacgaccag tatgggcatg
      421 cggcgtttga aggcggcgga caggggggct tcggagggtt tggcggattt ggcggtgcgc
      481 agggttttga ctttggggat attttcagcc aaatgtttgg aggcggttcg gggcgcgccc
      541 agcctgatta tcagggtgag gacgttcaag tcggtatcga aatcacgctt gaagaagccg
      601 caaaaggtgt gaagaaacgc atcaatattc cgacttatga agcgtgtgat gtctgtaacg
      661 gcagtggcgc gaaaccgggg acatccccgg aaacctgccc gacttgcaaa ggttcgggta
      721 cggtgcacat ccagcaggcg attttccgta tgcagcagac ttgtccgacc tgccacggtg
      781 cgggcaaaca cattaaagaa ccttgcgtca aatgccgtgg cgcggggcgg aataaggcgg
      841 tcaagacggt ggaagtcaat attcccgccg gtatcgatga cgggcagcgt atccgtttga
      901 gcggcgaagg cggaccgggt atgcacggtg cgcctgccgg cgacctgtat gtaaccgttc
      961 gcattcgggc gcataagatt ttccaacgcg acggtctgga cttgcattgc gaactgccga
     1021 tcagttttgc cacggctgct ttgggcgggg agttggaagt gccgaccttg gacggaaagg
     1081 tcaagctcac cgtccccaaa gaaacccaaa ccggcaggag gatgcgcgtg aagggtaagg
     1141 gtgtcaaatc tttacgcagc agcgcgaccg gcgatttgta ctgccatatt gttgtcgaaa
     1201 cgcctgtcaa tttgaccgac cgtcaaaaag agcttttgga agaatttgag cggatttcta
     1261 ccggcttgga aaaccaaaca ccgcgcaaga aatcgttttt agacaagctg cgcgatttgt
     1321 ttgattgatt ttaaggttcg gaaacaagca gccgtatcgg ggaatctccc tgatacggct
     1381 gtttttgttt gtttaaaaat agtttttatt ttcaatgggg tatggggcag ggtgggataa
     1441 ctgtttttaa ctgttctttt taaaacttga catcatggcg cgatgccaac aatatgtgaa
     1501 cgtctgttgt caaaggaaga ataatgaata aatctttatc cgggtcggta gaagaatacc
     1561 gcgaactgac gctccgaggc atgatactcg gtgcattgat cactgtaatt tttactgcgt
     1621 ccaacgttta cctcggtttg aaagtcgggc tgacctttgc ctcgtcgatt ccggcggcgg
     1681 tgatttcgat ggcggtttta aagtttttca aaggcagcaa tattttggaa aacaacatgg
     1741 tgcagaccca agcttcggcg gcgggtacgc tttcgaccat catcttcgtc ctgcccggtt
     1801 tgctgatggc gggctactgg agcggtttcc cgttctggca gacgacgctt ttatgtattg
     1861 ccggcgggat tttgggggtg attttcacca ttccgctgcg ttacgcgatg gtggtgaaaa
     1921 gcgatttgcc ttatccggaa ggtgtggcgg ctgctgaaat tttgaaagtg ggcggtcatg
     1981 aagaagggga taaccgtcag ggcggcagcg gcatcaaaga gctggcggcc ggcggcgcgt
     2041 tggcgggatt gatgagcttt tgtgccggag gtctgcgtgt gattgccgac agcgcgagtt
     2101 attggtttaa aagcggtacg gcaattttcc aactgccgat gggcttttca ctggccttgt
     2161 tgggcgcggg ctatttggtc ggactgacgg gcggcatcgc catcctgttg ggcatttcga
     2221 ttgcttgggg cattgccgtg ccgtatttct cctcacacat tccgcaacct tccgatatgg
     2281 aaatggcggc gtttgcgatg aagctgtgga aggaaaaagt gcgttttatc ggtgcgggaa
     2341 ccataggtat cgcggcggtt tggacgcttt tgatgctgct caagccaatg gtggaaggca
     2401 tgaagatgtc gtttaagagt tttggcggcg gtgcgcccgc tacagaacgc gctgaacagg
     2461 atttgtcgcc taaagccatg attttctggg tattgtctat gatgtttgtt ttaggcgtgt
     2521 cgttttacca ctttatcggc gattcgcaca ttacgggcgg catggcttgg cttttggtgg
     2581 tcgtttgcac gcttttggct tccgtcatcg gctttttggt cgccgccgcc tgcggttata
     2641 tggcaggttt ggtcggctcg tcttccagcc cgatttccgg cgtgggcatc gtgtccgtcg
     2701 tcgttatttc actggttttg ctgctggtag gcgaatccgg aggtttgttg gcggatgagg
     2761 ctaaccgcaa atttttgctg gcactgactt tgttttgcgg ctcggcagta atctgcgtgg
     2821 cttcgatttc caatgacaac ctgcaagact tgaaaaccgg ctacctgctc aaagccacgc
     2881 cttggcggca gcaagtcgcc ctgattatcg gctgtatcgt tggtgcgctg gttatttcgc
     2941 ccgtgttgga actgctttac gaagcctacg gctttaccgg cgcaatgccg cgcgaaggca
     3001 tggacgcggc gcaggctttg gcagcccctc aagcgacttt gatgacgacc atcgcgtcgg
     3061 gcattttcgc ccacaacctt gaatgggtct atatctttac cggtatcgtg attggagcag
     3121 tattaatcgt cgtcgatttg gtgttgaaaa aatcatcagg cggcaaactt gccctgcccg
     3181 tccttgcggt cggtatgggt atttatctgc cgccgtccgt caatatgccc atcgtggcag
     3241 gcgcggtgtt ggcggcggtg ttgaaacaca tcatcggtaa aaaagcggaa aaccgcgaag
     3301 gccgtctgaa aaacgccgag cgcatcggaa ccttgttctc cgccggcctg attgtcggtg
     3361 aaagcctgat cggtgtgatt atggcgttta ttattgcctt ctccgtgacc aacggcggct
     3421 cggatgcgcc gctcgcgttg aatctgcaaa actgggatgc cgccgcttct tggctgggtt
     3481 tggcgttctt cgttaccggg atgtttttct ttgcacagcg cgtactgaag gcgggcaagt
     3541 aggctgtcgg aaaaaatgcc gtctgaaacg ttcagacggc attttttatc ggtaaagcgg
     3601 aaggcggagc ttttcggctt gcgcccacgt tttgccggca aggtctttgg gcgacagcag
     3661 cggcgcggtt tgaagcggcc ag
//
LOCUS       DAXHRP010000183         3605 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.183, whole genome shotgun sequence.
ACCESSION   DAXHRP010000183 DAXHRP010000000
VERSION     DAXHRP010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.183"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            100..1215
                     /gene="lst"
                     /locus_tag="ACFM72_001933"
     CDS             100..1215
                     /gene="lst"
                     /locus_tag="ACFM72_001933"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HFC6258446.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAEW
                     AYFFHLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            complement(1379..1837)
                     /locus_tag="ACFM72_001934"
     CDS             complement(1379..1837)
                     /locus_tag="ACFM72_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC6258447.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAASFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            1956..2777
                     /locus_tag="ACFM72_001935"
     CDS             1956..2777
                     /locus_tag="ACFM72_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC6258448.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDERAAGVYEGVEFIRPEDIAETALW
                     LYQRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            complement(2828..3274)
                     /gene="yciA"
                     /locus_tag="ACFM72_001936"
     CDS             complement(2828..3274)
                     /gene="yciA"
                     /locus_tag="ACFM72_001936"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HFC6258449.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVDVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
BASE COUNT          854 a          782 c         1037 g          932 t
ORIGIN      
        1 tattcggtaa ctgtcggaat atctgctaaa attccgcatt tttccgtccc gggacactcg
       61 gggcgtatgt tcaatttgtc ggaatggagt tttagggata tgggcttgaa aaaggcttgt
      121 ttgaccgtgt tgtgcctgat tgttttttgt ttcgggatat tttatacatt tgaccgggta
      181 aatcaggggg aaaggaatgc ggtttccctg ctgaaggaca aactcttcaa tgaagagggg
      241 gaaccggtca atctgatttt ctgctatacc atattgcaga tgaaggtggc agaaaggatt
      301 atggcgcagc atccggggga gcggttttat gtggtgctga tgtctgaaaa caggaatgaa
      361 aaatacgatt attatttcaa tcagataaag gataaggcgg agtgggcgta ttttttccac
      421 ctgccctacg gtttgaacaa atcgtttaat ttcattccga cgatggcgga gctgaaggtg
      481 aaggcaatgc tgctgccgaa ggtcaagcgg atttatttgg caagtttgga aaaagtcagc
      541 attgccgcct ttttgagcac ttacccggat gcggaaatca aaacctttga cgacgggaca
      601 atcaatttaa ttcaaagcag cagctatttg ggtgatgagt tttctgtaaa cgggacgatc
      661 aagcggaatt ttgcccggat gatgatcgga gattggagca tcgccaaaac ccgtaatgct
      721 tccgacgagc attacacgat attcaagggt ttgaaaaaca ttatggacga cggtcgccgc
      781 aagatgactt acctgccgct gttcgatgcg tccgaactga aggcggggga cgaaacgggc
      841 ggcacggtgc ggatactttt gggttcgcct gacaaggaga tgaaggaaat ttcggaaaag
      901 gcggcaaaaa acttcaacat acaatatgtc gcaccgcacc cccgccaaac ctacgggctt
      961 tccggcgtaa ccacattaaa ttcgccctat gtcatcgaag actatatttt gcgcgaaatt
     1021 aagaaaaacc cgcatacgag gtatgaaatt tatacctttt tcagcggtgc ggcgttgacg
     1081 atgaaggatt ttcccaatgt gcacgtttac gcattgaaac cggcttccct tccggaagat
     1141 tattggctca agccggtgta tgccctgttt acccaatccg gcatcccgat tttgacattt
     1201 gacgataaag attaatcgca tagcaaatca aaatagaaaa tggcggagta agtaaggcaa
     1261 aaattaggat atggcgtatt ttttgaattg aagataattt ttgattgctt tgcgcttggt
     1321 gaaatggcaa agaaaatgcc gtctgaaggc ttcagacggc attgttctgt ttcggatgtt
     1381 attcgggtgc gcggaaactg tcgtggcagg atttgcagct tgcgccggtt tcgccgtagg
     1441 cggctttgat ttcatccagt ttgccggttt gtgctgcggc gttgagtttt tcgacggcgg
     1501 cggcgaattt tgttttttcg gcttcaaatt ttgcaccatc cgaccaaacg gcgggcaggg
     1561 cgcggccgtt gccttgcgga tcggactcaa aaagtgtgaa cggtttcttg ctgctttcgg
     1621 caaacgacgc tgccgcctgt ttgaattttt cgacatcgta aggttcttcg tctttgacca
     1681 ttttgcccat gcgtgtgaat tcgggcatca tggatttgaa cgcggcggtg cggttttcgg
     1741 aaatttcgcc tttgggttgg gaaggtattc cgctgcctcc gcaggcggaa aggagcagtg
     1801 tgatggcggc agcagcaagg ctgatttggg ttttcatatt gaatgtgtcc tgtcgtggtg
     1861 gtatggttgt tgtcattttc agtcggcgcg atgccgtctg aagggtgtta tgatacctga
     1921 aacaggtttg ggaaacgaga aagaaaggaa aaacaatggc tgttttaatt accggtgctt
     1981 cggcaggatt cggcgaagcg atgtgccgtg cgtttgtcgg ggcgggatac cgcgttatcg
     2041 gtgcggcgcg ccgtgcggac aggcttcagg ccttggcgga tgaattgggt gctttgtttt
     2101 accctttgga aatggacgtg tcgcgacgcg agtcggtgga aaacgcctta aacggcatcc
     2161 ccgatgaatt ttccgacatc gactgcctca tcaacaatgc cgggctggct ttgggtctgg
     2221 acacggcgga caaggcggat tttgaagatt gggaaacgat gattcaaacc aatgttttgg
     2281 gtttgacgtt cctgacgcgc aaaattttgc cgcaaatggt ggaacgcggc ggcggttatg
     2341 tgatgaattt gggttcgatt gcaggcaatt atgcttatgc cggcagcaac gtttacgggg
     2401 cgaccaaggc gtttgtgcgc cagttcagcc tgaatttgcg cgcggagttg gcggataaga
     2461 acatccgcgt taccaatatc gagccgggtt tgtgcggcaa tacggagttt tccaatgtgc
     2521 gcttcaaagg cgatgacgag agggcggcgg gcgtgtatga gggtgtggaa tttatccgcc
     2581 ccgaagatat tgcggaaacc gcattgtggc tgtaccagcg gccggcgcat atgaatgtga
     2641 acacgattga aattatgccc gtggcgcaga cttttgcagg aatgaaagtg ataaaaaaag
     2701 ccgtgcccga agtgcgggaa gactttgaaa aacagagtat gtcgctgttt tcccgcatca
     2761 ggtcctggtt caaatgatgc aaaatgccgt ctgaagacag tttcagacgg catttttacg
     2821 ggtattttta cggagtaggc aataagcccg ccaatttggg gttgccttct ttcggaatcg
     2881 ggcgcggatt gccttccgca tcgatggcaa cataagtgaa cacggcttcg gttacgaggt
     2941 agcggtcttc ggtaacgcaa tcgttcatca aagttttcac ccagacgtcg actttaagct
     3001 ggagggaagt gttgcccacg cggacgcaat gcccgtagca gcagacgacg ttgccgacct
     3061 tgaccgggcg gatgaagttc atttcctgaa cggcgacggt aacgatgcgt ccccgcgcga
     3121 tttccgccgc caatatgccg ccgcccaaat ccatctgcga cataatccag ccgccgaaaa
     3181 tgtcttggtt gggattggta tcgcgcggca tagcgacggt acgcaggagc agttcgcctt
     3241 gagggcgttg gcggttgcct tcttcgtgct gcataaagtt tccttgtttt attgaaatat
     3301 aaatcgaacc tgcacccctg cccgaaacgg gaagtcggga agtgtgtagt ttaacccatt
     3361 tgagacatac aagggcgggc gcggaacaga ttcgcaaggc gtattgtagg gcggggctgt
     3421 agagtgggct tcagtccgcc aatcccgcca aatcctaccc taagcaactg aaccgtcatt
     3481 cccacgaaag tgggaatcta gaatctcggg ggttcagtca ttttcgatag attcccgccg
     3541 cgtcaggggg tctggattcc cgcctgcgcg ggaatgacga atccatccat acggaaacct
     3601 gcacc
//
LOCUS       DAXHRP010000184         3565 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.184, whole genome shotgun sequence.
ACCESSION   DAXHRP010000184 DAXHRP010000000
VERSION     DAXHRP010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.184"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(121..975)
                     /gene="tsf"
                     /locus_tag="ACFM72_001937"
     CDS             complement(121..975)
                     /gene="tsf"
                     /locus_tag="ACFM72_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HFC6258450.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVISFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(1104..1832)
                     /gene="rpsB"
                     /locus_tag="ACFM72_001938"
     CDS             complement(1104..1832)
                     /gene="rpsB"
                     /locus_tag="ACFM72_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HFC6258451.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAIRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(2009..2242)
                     /locus_tag="ACFM72_001939"
     CDS             complement(2009..2242)
                     /locus_tag="ACFM72_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258452.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFV
                     VTVRRRNRLMKQQEQAEFEQQRAQRQKDSGTKP"
     gene            2320..2901
                     /locus_tag="ACFM72_001940"
     CDS             2320..2901
                     /locus_tag="ACFM72_001940"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HFC6258453.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRVAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     AKLNVPQFAGRKRRVHDLNLLLVPVVGMDRLGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            2962..3552
                     /locus_tag="ACFM72_001941"
     CDS             2962..3552
                     /locus_tag="ACFM72_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HFC6258454.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT          763 a          813 c         1055 g          934 t
ORIGIN      
        1 gttttgtttt cagacggcct ttatattcgg tcgtcttaaa ataggtaccg taaacggttt
       61 tctcaaaaaa aagcaccctg attcgtttgg aatccaggtg ctttcttttt cataagtgcc
      121 ttacactttg gcggctgcgg ctacttcggc tgcgtagtcg acaacggctt tctcgatacc
      181 gtcgcctact ttgtagcgga cgaagctgat cacttcagtg ccgttttctt tggcgaattg
      241 ggcaacagtt tgatcggggt tcatcacgaa tgcttggccg ttcagagtga tttcagccaa
      301 gaatttgcgg atacggcctt caaccatttt agcggcgatg tcggcaggtt tgccggaagc
      361 gatggcttgt tcggtgtaga tgtggcgttc tttttcaacg gtttcggcat ctacttcggc
      421 ttcgcttacg cattgtggtt tagcggcaac aatgtgcata ccgattttgc gtgctacgtc
      481 ttcagagcct ttgtactcaa ccaatacgcc ttcggtcgcc aatgcgccgt ggatgtaggc
      541 aaccagttgg ttggcagtgt cgatcacttg gaagcggcgg acagacatgt tctcgcccaa
      601 tttggcgatg atggctttgc gttctgcttc aaccagttcg ctcagttctt caacagaagc
      661 cggttttttc tcggcagcag ttttcgcaac gaagttggca aattctacga agcccgcgtc
      721 tttagcaacg aagtcggttt cgcagtttac ttcgaccaat gcgccgacat tgccgttgat
      781 cgcgtaagcc aatacgcctt cggcagcggt acggccggcc agtttaccgg ctttcgcacc
      841 ggatttgata cgcaggattt cttcggcttt gtcgaagttg ccttcggctt caaccaaggc
      901 ttttttgcat tccatcatgc ccaggccggt agcggcgcgc aggtcggcaa ccatttttgc
      961 agtaatttct gccattttga atctcctaga tttttgggaa atacggaaag gattttccgc
     1021 attcgggaat cgtgtgccgc gaacggacgt tcagacggca tatttgagaa aaggggcata
     1081 acgcccctct tcggtttgcc ggattactcg gcagcggctt cttgggcagc ggctacggtt
     1141 tcttgcagcg cttggttttt gccttccaaa actgcgtcag cgatgccgcg gcagtacagg
     1201 cggatggctt tggcggagtc gtcgttgccg gggatgacgt atttcacgcc gtcagggctg
     1261 ttgttggtat cgactacggc gataacgggg atgcccagtt tttcagcctc gaccagagta
     1321 cctttttggt agccggtatc gataacgaaa atcgcgtcgg gcaggccttt catgtttttg
     1381 ataccgccca aagaacgttc cagtttttca acatcgcgtt gcatttccag aatttctttt
     1441 ttgctgaaac cgctttcggc agcattttcc aaggctgcgg ttttttcttc caggcgtttg
     1501 atggattgct taacggtttt gtagttggtc agcataccgc ccaaccagcg gtaatcgacg
     1561 aaaggcatac cggcgcgggt cgcttcttcg cggatgatgt cgcgtgcctg gcgtttggta
     1621 cctacgaaca atactgtacc tttgttggca accagacggc gtatggcttc ttgcgcgtct
     1681 tggaacatcg gcagggtttt ttccaggttg acgatatgga ttttgttgcg cgcaccgaaa
     1741 atgtattgtg ccattttcgg gttccagaaa cgggtttggt ggccgaagtg gacaccggct
     1801 tcaatcatct gacgcatagt aatttgagac attttgattt ccttgaaagg gttaagggca
     1861 cacattcaat cgcatagaac ttgataggcg acgcctattg tcaagcaccc ttcggcgaaa
     1921 gtgggcataa gttttaaaaa ataaaagagt gtttccgaaa tggaaaactg acggattata
     1981 gcggataaga ggccgtctga aaagggattc agggttttgt gccgctgtct ttttgccgtt
     2041 gtgcacgctg ctgttcgaat tctgcctgtt cctgttgctt catcaagcgg ttgcggcggc
     2101 ggacggttac gacgaagacc gtgaacacgg tgggcagcac cgcccaaaaa accaaataaa
     2161 tcaaggcgcg cgcaatactc ggctgcgcgg cggaatacat aacggcaaca aaaagatagc
     2221 cgatggcgac gatgtgccac attgtgtgcg tcctgtttga atgttaacaa aatcgttata
     2281 atcgcaacat tctaccgcaa tcctgaaagg ccgtctgaaa tgaggaatga ggaaaaacgc
     2341 gccctgcgcc gcgaattgcg cgggcggcgt tcgcaaatgg ggcgggacgt gcgggcggcg
     2401 gcaacggtaa aaatcaaccg cctgctcaaa cgttatatta aaaaagggcg gaaaatcggc
     2461 gtgtattggc cgatgggcaa ggaattgcgt ttggacggct ttgtccgtgt cgcacaaaaa
     2521 cgcggcgcaa aactttatct gccttatatc gaaccgcgtt cgcggcggat gtggtttacg
     2581 ccgtatcctg aaagcggaat ggaacgggag cgcatacggg gcagggcgaa gttgaacgtg
     2641 ccgcagtttg cagggcggaa aaggcgtgtg catgatttga acctcttgct tgtgccagtg
     2701 gtcggtatgg acaggctggg ctaccgtttg ggacaggcag gcggctatta cgatgcgacg
     2761 cttgcggcga tgaaataccg tttgcaggca aaaaccgtgg gcgtgggctt tgcctgccag
     2821 ttggtggaca gactgtcggt cgaggcgcac gacctgccgc tggacggttt tgtgtcggag
     2881 gcggggatat tgtgttttta gccgttcaga cggcatttcg ggcggaaatg ccgtctgaag
     2941 gtggaatatt gggagaaaag gatgtcggaa aagataatac tgccggtctt gtcgttgggt
     3001 ggcgtacggc tcgaaccgtt ggatgtgcat catgaaacgg gtttgcgcga ggcggtttgc
     3061 gatggggaag tttggaagct gggagtaacg tccgcgcccc atccggatag ggtggcagac
     3121 tatatcggga cagcattggc aacgcgtttg gcgtttgcgg ttgtcgatga agaggcgggc
     3181 agggtggtcg ggacaacggc gtattatcat tttgaaccgc agattccgcg tttggatatt
     3241 ggattcacat ggtatgcggc atcggcacgg cggacacgga taaacacctg ttgcaaaatc
     3301 atgctgttgg attacgcatt tgatgttttg gcttgccgtt gcgtgggatg gcgcacggat
     3361 attctgaacc ttgcctcgca acgtgccatc gaacggctgg gtgcggaaaa agacggcgtg
     3421 ctgcgtatgc atatgctccg taaagacggc agtgtgcgcg atacggtcgt gtacagtatg
     3481 ctgagggaag attggtgcaa aaacagggaa atcctgaccg gcaggttggc agggtatggc
     3541 gtgcaggtgt gaggcagtat tttca
//
LOCUS       DAXHRP010000185         3529 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.185, whole genome shotgun sequence.
ACCESSION   DAXHRP010000185 DAXHRP010000000
VERSION     DAXHRP010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.185"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            262..1137
                     /gene="dapA"
                     /locus_tag="ACFM72_001942"
     CDS             262..1137
                     /gene="dapA"
                     /locus_tag="ACFM72_001942"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HFC6258455.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQVDIALARELNNRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEN
                     GQAKVRAALKASGQL"
     gene            1146..2342
                     /gene="bamC"
                     /locus_tag="ACFM72_001943"
     CDS             1146..2342
                     /gene="bamC"
                     /locus_tag="ACFM72_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HFC6258456.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDKVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKKPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTVLALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2399..3331)
                     /gene="pip"
                     /locus_tag="ACFM72_001944"
     CDS             complement(2399..3331)
                     /gene="pip"
                     /locus_tag="ACFM72_001944"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HFC6258457.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAE
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIRKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEDVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLVDALVQAVEDILPHLL"
BASE COUNT          944 a         1157 c          789 g          639 t
ORIGIN      
        1 agcaccttag agaatcgttc tctttgagct aaggcgaggc aacaccgtac tggtttttgt
       61 taatccacta taaatccgac ggcaccggca taaaccggcg aatataataa aatgatttca
      121 aacaggaaaa atcaatttcc accatacctt tcggcgcaaa cgccccacat ccgcaacccg
      181 ccggatttca cacctgcggt aaagtaggct acaatcggaa gcattaccgc cccctacacc
      241 acaactgata aaaggttctg tatgttacaa ggtagcctgg ttgccctgat taccccgatg
      301 aatcaagacg gcagcatcca ttacgaacaa ctccgcgact taatcgactg gcacattgaa
      361 aacggcacgg acggcatcgt tgccgtcggc acgacaggcg aatccgccac cctctccgtc
      421 gaagaacaca ccgccgtcat cgaagccgtc gtcaaacacg ttgccaaacg cgtccccgtc
      481 atcgccggca caggggcaaa caacaccgtc gaagccatcg ccctttccca agccgccgaa
      541 aaagccgggg cggactacac cctctccgtc gtcccctatt acaacaaacc ttcgcaagaa
      601 ggcatgtacc gccatttcaa agccgttgcc gaagccgccg cgattccgat gatactctac
      661 aacgtacccg gcagaaccgt cgtcagcatg aacaacgaaa ccatcctgcg ccttgccgaa
      721 atccccaaca tcgtcggcgt gaaagaagcc agcggcaaca tcggcagcaa catcgaactc
      781 atcaaccgcg cgcccgaagg cttcgtcgtc ctttccggcg acgaccatac cgccctgccg
      841 ttcatgctgt gcggcggaca cggcgtgatt accgtagccg ccaacgccgc gcccaagctc
      901 tttgccgata tgtgccgcgc cgcgctgcaa gtcgacattg ccctcgcacg cgaactcaac
      961 aaccggctga ttccgattta cgacaccatg ttctgcgaac ccagccccgc cgcaccgaaa
     1021 tgggcggtat ccgccttggg cagatgcgaa ccgcacgtcc gtttgccgct cgttccgctg
     1081 acggaaaacg gacaagcaaa agtccgcgcc gccctgaaag cctcaggaca actttaaata
     1141 tagccatgcc gtccgaaccg ttcggacggc ataacgcaac aaacacttta atatccatca
     1201 cacaggatga cacgatgacc catatcaaac ccgtcattgc cgcgctcgca ctcatcgggc
     1261 ttgccgcctg ctccggcagc aaaaccgaac agcccaagct cgactaccaa agccggtcgc
     1321 accgcctgat caaacttgaa gtcccacctg atttgaacaa ccccgaccaa ggcaacctct
     1381 accgcctgcc tgccggttcg ggcgccgtcc gcgccagcga tttggaaaaa cgccgcacac
     1441 ccgccgtcca acagcctgcc gatgccgaag tattgaaaag cgtcaaaggt gtccgcctcg
     1501 agcgcgacgg cagccaacgc tggctcgttg tcgacggcaa gtctcctgcc gaaatctggc
     1561 cgctcctgaa agccttttgg caggaaaacg gcttcgacat caaatccgaa gaacccgcca
     1621 tcggacaaat ggaaaccgag tgggcggaaa accgcgccaa aatcccccaa gacagcttgc
     1681 gccgcctctt cgacaaagtc ggcttgggcg gcatctactc caccggcgag cgcgacaaat
     1741 tcatcgtccg tatcgaacag ggcaaaaacg gcgtttccga catcttcttc gcccacaaag
     1801 ccatgaaaga agtgtacggc ggcaaagaca aagacacgac cgtatggcag ccctccccgt
     1861 ccgatcccaa cctcgaagcc gctttcctga cgcgctttat gcaatatttg ggcgttgacg
     1921 gacagcaggc ggaaaacgca tcggcaaaaa aacctaccct tcccgccgcc aacgaaatgg
     1981 cgcgtatcga aggcaaaagc ctgattgtct ttggcgacta cggcagaaac tggcggcgca
     2041 ccgtgctcgc cctcgaccgc atcgggctga ccgtcgtcgg tcaaaacacc gaacgccacg
     2101 ccttcctggt tcaaaaagcc ccgaacgaaa gcaatgcagt taccgaacaa aaacccggcc
     2161 tgttcaaacg cctgctgggc aaaggcaaag cggagaaacc tgccgaacag ccggaactga
     2221 ttgtctatgc agaacctgtc gccaacggct cgcgcatcgt cctgctcaac aaagacggca
     2281 gcgcatatgc cggcaaagac gcatccgcat tattgggcaa actccattcc gaactgcgtt
     2341 aaaccattca aaacaaaagc agcttccaaa cagaagctgc ttttttatgc ggaacttttt
     2401 acaacaaatg gggcaaaata tcctcaactg cctgaaccaa cgcatccacc aaaggcggat
     2461 cgaacgcacg atgccctgcc tgaaccaccc tcaattccgc ttcgggaaag gctttcgaca
     2521 gcgcccacgc actctgcatc ggcgtacaca aatcataccg cccctgcacg ataatggtcg
     2581 ggatatgccg tattttgccg atattgttca aaatcgccct atcgccctgc aaccagccgc
     2641 cgttgacaaa ataatggttt tccaaacgcg caatcgccag tgaggcataa gcatcttcat
     2701 ccacatcctc cggctcgaaa cggatcagat agctttccca atccgcccaa gccttcgcgg
     2761 cagacaggca cacttcttca tcttgatgaa acagcaaccc gtgatacgcc tcaatcagcc
     2821 ggttccgccg attttcagca atcggcgcga caaatttttg ccattgttcc ggataaatcc
     2881 ggctcacacc gcccgcctcg ttcagccacg ccgtttcaga cggcctgcac aaaaatatcc
     2941 cgcgcaatac caatcccttt acccgttcag gatgggtttg ggcataagcc agcgacaaag
     3001 tgctgcccca cgaaccgccg aacaccagcc atttcctgat acccagcatt tcacggactt
     3061 tttcaatatc cgccaccaaa tcccaagtcg tattgtcttc cgcacaagca tacgggcgcg
     3121 aacgtccgca accgcgctgg tcgatgatga cgatacggaa cacatcggga ttgaaaaaac
     3181 cccgacattc aggcgaagcc tccgcgcccg gcccgccatg taaaaaaatg accggcacac
     3241 cgtcgggatt gcccgactct tcccaataaa tttgatgaat ttcagacacc tgcaagtatc
     3301 cgctatgaaa aggctgtttt atctcataca tcatcttctc ccatattgct tctgacaatc
     3361 cgaacattcc cacacgcaac atcacgcacg agacacaagc cgccccgaaa ggcaaatgcc
     3421 gaaaaatcgc gatatagtga attaacaaaa atcaggacaa ggcggcgagc cgcagacagt
     3481 acggatagta cggaaccgat tcactcgtgc ttaagcacct tagagaatc
//
LOCUS       DAXHRP010000186         3478 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.186, whole genome shotgun sequence.
ACCESSION   DAXHRP010000186 DAXHRP010000000
VERSION     DAXHRP010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.186"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            43..720
                     /locus_tag="ACFM72_001945"
     CDS             43..720
                     /locus_tag="ACFM72_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HFC6258458.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPNNKCDSGKKGQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYST
                     NQDLTNTSKFVYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRGDRRTR
                     RTMCQYK"
     gene            744..1358
                     /gene="pilV"
                     /locus_tag="ACFM72_001946"
     CDS             744..1358
                     /gene="pilV"
                     /locus_tag="ACFM72_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HFC6258459.1"
                     /translation="MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFAIDA
                     IKTKAQLAEEQLKRFSYELKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDGSA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            1355..2353
                     /locus_tag="ACFM72_001947"
     CDS             1355..2353
                     /locus_tag="ACFM72_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HFC6258460.1"
                     /translation="MRRKMLNVPKGNYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLSAQQDLRNAATLIVRDARMAGGFGCFNMSEHTKNDIIVDPSKQTQH
                     VPVKPGDKQENPLFSLEWANTNNTNNNTAKLIPIAESTDIKYPGFAQARLALIFQYGI
                     DDLDASAETVVVSSCSKIAKPGKKISTLQEAKSALQITNDDKQNGNITRQRHVVNAYA
                     VGRIAGEEGLFRFQLDDKGKWGNPQLLAKKIRDMKVRYIYVSDCPEDDDAGKEEKFKY
                     TGTFDSSTNAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2332..2925
                     /locus_tag="ACFM72_001948"
     CDS             2332..2925
                     /locus_tag="ACFM72_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HFC6258461.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRSCLAKSTGLCIDNKGMEYKKGTQSVSKMPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2930..3403
                     /locus_tag="ACFM72_001949"
     CDS             2930..3403
                     /locus_tag="ACFM72_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HFC6258462.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQAIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDKASAEAYSETLSADAGCEAFSNRKK"
BASE COUNT          999 a          691 c          873 g          915 t
ORIGIN      
        1 aatttaatcc acgatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacgccca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggctttcggc gacaaaaacg gcaataaggg atatgacaat
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa tgataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtcagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttattcta ccaatcagga tctcacgaat
      541 acttccaaat ttgtttactc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattgacag cagcggcagg
      661 gtcgaagttt gccctagggg tgatcggcgt actcggcgta ctatgtgcca gtataaataa
      721 cagtttcagt tttaaaaatg aatatgaaga ataatgattg cttccgcctg aaagattccc
      781 agtccggtat ggcgctgata gaagtcttgg ttgctatgct cgttctgacc atcggtattt
      841 tggcgttact gtctgtgcag ttgcggacag tcgcttccgt cagggaggcg gagacacaaa
      901 ccatcgtcag ccaaatcacg caaaacctga tggaaggaat gttgatgaat ccgaccattg
      961 attcggacag caacaagaaa aactataatc tttacatggg aaaccatcat acactatcag
     1021 ctgtggatgg cgattttgcg attgatgcca taaaaactaa ggcgcagttg gcagaggaac
     1081 aattgaagag atttagttat gagctgaaaa atgccttgcc ggatgcggca gccatccatt
     1141 acgccgtctg caaggattcg tcgggtgttg cgccgacatt gtccgccggc agtacttttt
     1201 cttcaaattg cgatggtagt gcaaatgggg atactttgat taaagtattg tgggtaaatg
     1261 attcggcagg ggattcggat atcgcccgta cgaatcttga gacgaacggc aacaatatcg
     1321 tatataccta tcaggcaagg gtcggaggtc gggaatgaga cgtaaaatgc taaacgtacc
     1381 aaaaggcaat tatgatggta tgaagggttt taccattatt gaatttttgg ttgcgggcat
     1441 gctcagtatg attgtcctga tggcggtcgg atcgagttac ttcacatccc ggaaattaaa
     1501 tgatgcggca aacgagcgtc tttccgcgca acaggatttg cggaatgcgg caacattgat
     1561 tgtccgcgat gcaagaatgg cagggggctt cggttgtttc aatatgtccg agcatactaa
     1621 aaatgatatt attgttgatc caagtaagca aactcaacat gtccctgtaa aacccggtga
     1681 caaacaagaa aatccccttt tttctttaga gtgggctaat actaataata ctaataataa
     1741 tacagctaaa ttgattccta ttgctgaatc cacagatatt aaatatccgg gttttgccca
     1801 ggctcgtctg gcattgattt tccaatacgg catcgatgat cttgatgcga gtgctgagac
     1861 tgttgtagtc agcagctgtt ccaaaatagc aaaaccgggt aagaaaatat ctaccttgca
     1921 agaagcaaag agtgcattac agattactaa tgatgataaa caaaatggaa atatcacccg
     1981 tcaaaggcat gtggtcaatg cctatgcggt cggcaggatt gccggtgagg aaggtttgtt
     2041 ccgcttccaa ttggatgata agggcaagtg gggtaatcct cagttgctcg cgaaaaagat
     2101 tagagatatg aaagtgcggt atatctatgt ttccgactgt cctgaagatg acgatgccgg
     2161 caaagaggaa aaattcaaat atacgggtac attcgacagc tccacaaatg ctgttacgcc
     2221 cgccggggtg gaggttttat tgagtagcgg tactgatacc aagattgccg cttcttcaga
     2281 caatcatatt tatgcttacc gtatcgatgc gacaatacgc gggggaaatg tatgcgcaaa
     2341 cagaacactt tgacgggaat cccgacttct gacggacaga gggggttcgc gctgtttatc
     2401 gtgctgatgg tgatgatcgt cgtggctttt ttggttgtaa ctgccgcgca gtcttacaat
     2461 accgagcagc ggatcagtgc caacgaatca gacaggaaat tggctttgtc tttggccgag
     2521 gcggctttgc gggaaggcga acttcaggtt ttggatttgg aatatgatac ggacagtaag
     2581 gttacattta gcgaaaactg tggaaaaggt ctgtgtaccg cagtgaatgt gcggacaaat
     2641 aatgataatg aagaggcttt tgacaatatc gtggtgcaag gcaagcccac cgttgaggcg
     2701 gtgaagcgtt cttgccttgc aaaatctaca ggcctgtgca ttgacaataa agggatggaa
     2761 tataagaaag gcacgcaaag cgtcagcaaa atgccacgtt atattatcga atatttgggc
     2821 gtgaagaacg gagaaaatgt ttatcgggtt actgccaagg cttggggtaa gaatgccaat
     2881 accgtggtcg tccttcaatc ttatgtaagc aataatgatg agtaataaaa tggaacaaaa
     2941 agggtttaca ttgattgaga tgatgatagt cgtcgcgata ctcggcatca tcagcgtcat
     3001 tgccatacct tcttatcaaa gttatattga aaaaggctat cagtcccagc tttatacgga
     3061 gatggtcggt atcaacaata tttccaaaca gtttattttg aaaaatcccc tggacgataa
     3121 tcaggccatc aagagcaaac tggaaatatt tgtctcaggc tataagatga atccgaaaat
     3181 tgccgaaaaa tataatgttt cggtgcattt tgtcaataag gaaaaaccaa gggcatacag
     3241 cttggtcggc gttccaaaga cggggacggg ttatactctg tcggtatgga tgaacagcgt
     3301 gggcgacgga tacaaatgcc gtgataaggc ttctgccgaa gcctattcgg agaccttgtc
     3361 cgcagatgcc ggctgtgaag ccttctctaa tcgtaaaaaa taaggttgtt ttgccgatgc
     3421 cgtctgaaaa tcaatgttca gacggtattt ttatgggtat agtggattaa caaaaatc
//
LOCUS       DAXHRP010000187         3474 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.187, whole genome shotgun sequence.
ACCESSION   DAXHRP010000187 DAXHRP010000000
VERSION     DAXHRP010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.187"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     regulatory      65..168
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            234..1457
                     /gene="cytX"
                     /locus_tag="ACFM72_001950"
     CDS             234..1457
                     /gene="cytX"
                     /locus_tag="ACFM72_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HFC6258463.1"
                     /translation="MSGNASSPSSSSTIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTDGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGVSANNISAKLSETPIAVAVAVVGTLLAVLLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            1454..2554
                     /locus_tag="ACFM72_001951"
     CDS             1454..2554
                     /locus_tag="ACFM72_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFC6258464.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVIRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWHADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNASAEHGSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            2575..3192
                     /gene="thiE"
                     /locus_tag="ACFM72_001952"
     CDS             2575..3192
                     /gene="thiE"
                     /locus_tag="ACFM72_001952"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HFC6258465.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGDE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLREYVKQAGGTPVVA
                     IGGIDLNNAEEVLATGVSSLAVVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT          718 a         1075 c          956 g          725 t
ORIGIN      
        1 aatgcgccgt gccgcctgaa atgtaagatt tttgccaacg ccccctgctt ttgtgtacac
       61 ttaaagctcc ttgtcggagt gccgccgccg ggcggctgag attgcgaaag cagaatccgt
      121 agaacctgtc ggggtaatgc ctgcgtagga aacaaaacct ccccgccctt tcgggcttcc
      181 gttccctttt ccgcacttcc ccgccccatt ttcatgtttt ttaaggactt gatatgtcgg
      241 gcaatgcctc ctctccttca tcttcctcca ccatcgggct gatttggttc ggcgcggcgg
      301 tatcgattgc cgaaatcagc acgggtacgc tgcttgcgcc tttgggctgg caacgcggtc
      361 tggcggctct gcttttgggt catgccgtcg gcggcgcgct gttttttgcg gcggcgtata
      421 tcggcgcact gaccggacgc agctcgatgg aaagcgtgcg cctgtcgttc ggcaaacgcg
      481 gttcagtgct gttttccgtg gcgaatatgc tgcaactggc cggctggacg gcggtgatga
      541 tttacgccgg cgcaacggtc agctccgctt tgggcaaagt gttgtgggat ggcgaatctt
      601 ttgtctggtg ggcattggca aacggcgcgc tgattgtgct gtggctggtt ttcggcgcac
      661 gcaaaacaga cgggctgaaa accgtttcga tgctgctgat gctgttggcg gttctgtggc
      721 tgagtgccga agtcttttcc acggcaggca gcaccgccgc acaggtttca gacggcatga
      781 gcttcggaac ggcagtcgaa ttatccgccg tcatgccgct ttcctggctg ccgcttgccg
      841 ccgactacac acgccaagca cgccgcccgt ttgcggcaac cctgacggca acgctcgcct
      901 atacgctgac gggctgctgg atgtatgcct tgggtttggc agcggcgttg ttcaccggag
      961 aaaccgacgt ggcaaaaatc ctgctgggcg caggtttggg tgcggcaggc attttggcgg
     1021 tcgtcctgtc gaccgttacc accacttttc tcgatgccta ctccgccggc gtaagtgcca
     1081 acaatatttc cgccaaactt tcggaaacac ccatcgccgt tgccgtcgcc gttgtcggca
     1141 cactgcttgc cgtcctcctg cccgttaccg aatatgaaaa cttcctgctg cttatcggct
     1201 cggtatttgc gccgatggcg gcggttttga ttgccgactt tttcgtcttg aaacggcgtg
     1261 aggagattga aggctttgac tttgccggac tggttctgtg gctggcgggc ttcatcctct
     1321 accgcttcct gctctcgtcc ggctgggaaa gcagcatcgg tctgaccgcc cccgtaatgt
     1381 ctgccgttgc cattgccacc gtatcggtac gccttttctt taaaaaaacc caatctttac
     1441 aaaggaaccc gtcatgaccc gtatcgccat cctcggcggc ggcctctcgg gaaggctgac
     1501 cgcactgcag cttgcagaac aaggttatca gattgcactt ttcgataaag gctgccgccg
     1561 gggcgaacac gccgccgcct atgttgccgc cgccatgctc gcgcctgcgg cggaagcggt
     1621 cgaagccacg cccgaagtca tcaggctggg caggcagagc attccgcttt ggcgcggcat
     1681 ccgatgccgt ctgaacacgc acacgatgat gcaggaaaac ggcagcctga ttgtgtggca
     1741 cgggcaggac aagccattat ccagcgagtt cgtccgccat ctcaaacgcg gcggcgtagc
     1801 ggatgacgaa atcgtccgtt ggcacgccga cgacatcgcc gaacgcgaac cgcaactcgg
     1861 cggacgtttt tcagacggca tctacctgcc gaccgaaggc cagctcgacg ggcggcaaat
     1921 attgtctgca cttgccgacg ctttggacga actgaacgtc ccttgccatt gggaacacga
     1981 atgtgccccc gaagacctgc aagcccaata cgactggctg atcgactgcc gcggctacgg
     2041 cgcaaaaacc gcgtggaatg cttctgccga acacggcagc accctgcgcg gcatacgcgg
     2101 cgaagtggcg cgggtttaca cacccgaaat cacgctcaac cgccccgtgc gcctgctgca
     2161 cccgcgttat ccgctctaca tcgccccgaa agaaaaccac gtcttcgtca tcggcgcgac
     2221 ccaaatcgaa agcgaaagcc aagcccccgc cagcgtgcgt tcagggttgg aactcttgtc
     2281 cgcactctat gccgtccacc ccgccttcgg cgaagccgac atcctcgaaa tcgccaccgg
     2341 cctgcgcccc acgctcaacc accacaaccc cgaaatccgc tacagccgca aacgccgcct
     2401 catcgaaatc aacggccttt tccgccacgg tttcatgatc tcccccgccg taaccgccgc
     2461 cgccgtcaga ttggcagtgg cactgtttga cggaaaagac gcgcccgaac gtgatgaaga
     2521 aagcggtttg gcgtatatcc gaagacaaga ttaaagccgt ctgaaaggaa ccccatgacc
     2581 ttcccgccac tcaaatcccc gctcaaattc tacgccgtcg tccccaccgc cgattgggtg
     2641 gggcgcatgg tcaaagcagg tgccgacacg gtgcaactgc gctgcaagac cctgcacggc
     2701 gatgaattga aacgcgaaat cgcccgctgc gtcgccgcct gtcaaggcag ccgtacgcag
     2761 cttttcatca acgaccactg gcgcgaggca atcgaagcag gcgcgtacgg cgtgcatctc
     2821 ggacaagaag acatggacac cgccgacctt gccgccatcg ccgccgccgg tttgcgcttg
     2881 ggtttgagta cgcactccgt tgccgaactc gaccgcgccc tgtccgtaca ccctagctac
     2941 gtcgccagcg gcgcgatttt cccgaccacg accaagcaaa tgcccaccgc cccgcaaggc
     3001 ttggacaaac tgcgcgaata tgtgaaacag gcaggcggca cgcccgtcgt cgccattggc
     3061 ggcatcgatt tgaacaatgc tgaagaggta ttggcaaccg gcgtttcctc actcgccgtc
     3121 gtccgcgccg tgaccgaagc ggcaaatccc gaagcggtgg ttaaagcgtt tcaggctttg
     3181 tgggatggat aaaaccgaaa gaagaaaatt caattgccgt gtaggcaaaa cttagcccgt
     3241 tatcgcaaac atacttaact ttaaatgtgg catatcatca aattccgtca tttccgcgca
     3301 agcgggaatc cgccttaaaa cttgagaaac catcatttga aaaacagttt ccgaatttca
     3361 aaaatggatt cccgcctgcg cgggaatgac ggcaaccggc cggttgcgta tcaaaaaata
     3421 aagtaattcg gctagatata gtggattaac aaaaatcagg acaaggcgac gaag
//
LOCUS       DAXHRP010000188         3469 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.188, whole genome shotgun sequence.
ACCESSION   DAXHRP010000188 DAXHRP010000000
VERSION     DAXHRP010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.188"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..162
                     /locus_tag="ACFM72_001953"
     CDS             <1..162
                     /locus_tag="ACFM72_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
                     /protein_id="HFC6258466.1"
                     /translation="DIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAG
                     LKLALSRCR"
     gene            complement(295..675)
                     /locus_tag="ACFM72_001954"
     CDS             complement(295..675)
                     /locus_tag="ACFM72_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HFC6258467.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEADDGGGRGHMPPVQNQAGTADF
                     RAFSCENGLSVRVRHLDSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            1152..3233
                     /locus_tag="ACFM72_001955"
     CDS             1152..3233
                     /locus_tag="ACFM72_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HFC6258468.1"
                     /translation="MKSLKTFLIWGIVVLVGVASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMTYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEILAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            3223..3417
                     /locus_tag="ACFM72_001956"
     CDS             3223..3417
                     /locus_tag="ACFM72_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HFC6258469.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
BASE COUNT          759 a         1020 c          888 g          802 t
ORIGIN      
        1 gatatttggc tgcacaacgg ctgcctgaaa atcagcccga gccgccatgt caagctggaa
       61 gcgtgggatg ccattgatgc agacgatgtc attttatcat tggataacag ccctgaagaa
      121 atcggagcag gtttaaagtt ggcattgagc cgctgccgat agaataaacc cggaacaaaa
      181 cgaaaaataa tccgccacgc ccgaaaaccg ccggaaccag ccgacggcca aaacaaaacc
      241 ggtacaaaaa accgcccgaa aaatccggac ggcggttcaa acaggctgcc ccgtttaacg
      301 ggcgcggcag gaagtttcga ccgaattgcc gtaggcatcg gtaaagccga aaaaggcttc
      361 gccgcctttc tggtgccact cggttgcgtt tccgaacaaa ccgtgttcgg cggtatagcg
      421 ttctccggat gcggcaacgt cggaagagag gacggcacgc ctgccgtcca gccgcaacgc
      481 gactttgccg ctgtccaaat ggcggacgcg cacagacaac ccgttctcgc atgaaaacgc
      541 ccgaaaatct gccgtgccgg cttggttttg aacgggcggc atatgcccgc gtccgccgcc
      601 atcatccgct tccggcacgg cacaggccgc caaagacaaa accggtacgg tcagcgcgaa
      661 aaatctgata ttcataaaag ctccccaata aaaataagat atgaaacaac cgccctgatt
      721 ccaagctgcg gcaacgccat actataaacg gacgcgcaaa cacacaagcc cgataaccgg
      781 aatttacccg cgattaaccg acaatccgga ttgcgcgccc cttctttacc cgtcttccgg
      841 cgccgccttt tgcctgacga tgccgtccaa acccgcctgt ccgcccgaag gaatgtaaat
      901 tttttccaaa ttccaagtaa aaaccgctat cagtgtgcta atttgcgtta aaatcctatt
      961 cggcgtttaa cgttttgtgc gcccgcatcc ctgcactgtt tgatgcgggc ataaggcaca
     1021 aatcccgaca agcgcactgt ttcatacttc gttaatcatt cagactccgg tttgtgcccg
     1081 tgccggcaga tggttcggcc gtttcccgcc gttcaggcat attccgacag tgtgagataa
     1141 ggatttattc gatgaaatca ctcaaaacct tcctcatttg gggcatagtg gtactggtcg
     1201 gcgtagcatc ctttaccact ttggcactca gccgaggcga acaggtcagc gcggtatgga
     1261 tggttaccgc cgccatatcc gtttactgca tcgcctaccg tttttacagc ctctacatcg
     1321 ccaaccgcgt gatgcggctc gatcctaacc gcctgactcc ggcagaacgc cacaacgacg
     1381 gcttggacta cgttccgacg cacaagggcg tattgttcgg acaccacttt gccgcgattg
     1441 ccggcgcggg ccctttggtc ggcccggttt tggcggcgca aatgggttac ctgcccggta
     1501 ctttgtggat tatcttcggc gtggtgtttg ccggcgcggt acaggatatg atggtcttgt
     1561 tcgtctctat gcgccgcgac ggtaagtctt tgggcgatat tgtgaaacag gaactcggca
     1621 ctgtccccgg cgtgattgcc tccatcggta ttttgatgat tatggtcatc attatggcgg
     1681 tgttggcgtt gattgtcgta aaagcactgg ttcacagccc ttggggtacg ttcaccattg
     1741 ccgccactat gccgattgcc ctgtttatgg gtatttacac gcgctatatc cgtccgggca
     1801 aaatcggcga gatttccatc gtcggcttta ttttgctgat gctggcggta atttacggcg
     1861 aagatgtggc gaaaagttcc atcggacatt ggttcgacct tgacggcatc cagctcactt
     1921 gggcgattat gacttacggc tttgtcgcct ccgtattgcc cgtatggttg ctgctcactc
     1981 cgcgcgacta tctctccacc ttcctgaaaa tcggtacgat tgcggccttg gctttgggca
     2041 tcgtcatcgt caatcccact ttgcaaatgc ctgccgtaac ccactttatc gacggttcgg
     2101 gtccggtatt ctcaggcgca ttgttcccgt tcctcttcat caccatcgcc tgcggtgcgg
     2161 tttcaggctt ccacgcgctg atttcttccg gcaccacgcc gaaaatgctg gaaaacgaaa
     2221 cccacgtccg tatgattggt tacggcggta tgttgatgga aagtttcgta gccattatgg
     2281 cgcttgccgc cgccgcatcg cttgatcccg gcgtgtactt cgccatgaac agccctgccg
     2341 ccctgatcgg tacggatgcc aacaccgccg ccgaagtgat taccaccaag ctgcaattcc
     2401 ctgtcgatgc cgcaacgctg ttgcacaccg ctaaagaagt tggagaaaac accatcctgt
     2461 cccgtgccgg cggtgcgccc accctcgcag tcggtatggc gcacattatg agccgcctga
     2521 ttccgggcga ggcgatgatg gcgttctggt atcacttcgc cctgttgttt gaagccttgt
     2581 tcatcctgac cgccgtcgat gccggtacgc gcgtcgcacg ttttatgatt caagacttgg
     2641 gcagcatctt ctacaaacct ttcggcaaca ccgactccat ccccgccaac ctgattgcga
     2701 ccttcttcgc cgtggcattg tggggctact ttctctacac cggcgtaacc gacccgctgg
     2761 gcggcatcaa ctcgctctgg cctttgttcg gcatcgccaa ccaaatgctg gcgggcgtgg
     2821 ccttgattat gtgtgccgtg gtgctgatta agatgaaacg cgaccgttat gtttgggtgg
     2881 tactcgttcc cgccgtcggc gtactgttcg taacctgcta cgccggcctg caaaaactgt
     2941 tccacagcga tccgcgcatc agcttccttg cccacgccgg caaatacagc gacgcattgg
     3001 ctaaaaacga aatccttgcg cctgccaaag acatcggcga aatggcgcaa atcatcttca
     3061 acgacaagat taatgccggt ctgaccatcc tcttcttgtc ggttgtcgtg attgtcgccg
     3121 cgtacggttt gcgtaccgcc ctcaaagcac gcaaagtcgg ctggccgacc gccaaagaaa
     3181 tcccggcggt gtaccgcgac ggcaaacagc cggaggcaca aagtgaagca taagctcgcg
     3241 tcttggtgga aaaccatcaa gctgacggca aacttgatgg caggcgtgcc cgattatgaa
     3301 aactacgttg cacagcagcg caaacataat cccaacgccc ctgtgatgac caagctgcag
     3361 tttcaagact attgccgcaa acgccgctgc ggcgcaaacg gcggacgctg ctgttaagcc
     3421 tgcttgaaac aaattccgtc tgaacgccgc ttcagacgga atttttata
//
LOCUS       DAXHRP010000189         3462 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.189, whole genome shotgun sequence.
ACCESSION   DAXHRP010000189 DAXHRP010000000
VERSION     DAXHRP010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.189"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            171..680
                     /locus_tag="ACFM72_001957"
     CDS             171..680
                     /locus_tag="ACFM72_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258470.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRNRNLPATATAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
     gene            complement(733..1080)
                     /locus_tag="ACFM72_001958"
     CDS             complement(733..1080)
                     /locus_tag="ACFM72_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC6258471.1"
                     /translation="MYIPDKGDIFHLNFDPSSGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSSGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(1082..1318)
                     /locus_tag="ACFM72_001959"
     CDS             complement(1082..1318)
                     /locus_tag="ACFM72_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HFC6258472.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDAGNEVV"
     gene            complement(1677..2168)
                     /locus_tag="ACFM72_001960"
     CDS             complement(1677..2168)
                     /locus_tag="ACFM72_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC6258473.1"
                     /translation="MFWQLTVVSVTAVIALGTIFINKKTSKQKATLDVILNDYQDAQF
                     VEADNHISPYIRGTAVDDNNARIDLYEIYQNKGGQWEKERGHLLTVINRHEFYACAIN
                     SGVLDEDLFKRLHCTNFIKLWNAVSPLVMKIREEERKDTIFRELEILVALWKANPLKA
                     SDL"
     gene            complement(2606..2974)
                     /locus_tag="ACFM72_001961"
     CDS             complement(2606..2974)
                     /locus_tag="ACFM72_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HFC6258474.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMARLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
     gene            complement(2971..3102)
                     /locus_tag="ACFM72_001962"
     CDS             complement(2971..3102)
                     /locus_tag="ACFM72_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258475.1"
                     /translation="MQNQNTRPVKIELKGEAGKRVLLAAARRIAKTHQKAVKALADK"
BASE COUNT          875 a          852 c          792 g          943 t
ORIGIN      
        1 gcgctgaaat tcgaccagtt gatactcgaa tttcctgagc gcggggacgg cgcatgggta
       61 cacatcggtt tccgacgcaa cagcccgcaa cgcaaccaga tactgaccgc aaccaagaaa
      121 aacggcaaaa ccgtgtatct gcccgggctg catccttgag gtcgtctgaa atggatattt
      181 tattgaaata ctggaagccg gtaggtgtat tgctgctaat cgtcctgatt tttaccgcat
      241 ggcatttcga ccgtgccgaa aaataccgca tgggacggga ggctgctgct gccgaaatct
      301 cgaatcgtct gaaagacggc tatatcgagc aggcaaagca ggcgcgttct gccgagcaga
      361 aggccgctgc cgcgtttgcc gaacgacaaa ccaaattaga agaggaaaaa caaaatgctg
      421 aaaaaactgt tgccgctatg cgtcttgagc ttaaccgcct gcgccactac gccgccgccc
      481 aaaatcgcaa cagaaacctg cccgcaaccg ctaccgccgc caccgcatct gatggcgcgt
      541 cagattccca aggctggcta ttattcggac agtgcgctga aaaatatgca ggactggcag
      601 aaacagccga cggacatgca gccgatttaa gggaatggca ggcatatggt catgcagtaa
      661 gcagtcagcg tgccgaataa gcaaccgccc gaacctgtaa gaaaagatta caggttcggg
      721 cggtttcagc atttaatcga ataagacggc gccgatgcgc gccagcacat cgtccaatac
      781 ataatcgggt acagtttctt taaaagaagc cttgcggatt tgccagtcca gagatttgag
      841 ctggtggcag tggacattgc cctgcgtttc cgttcctgca ccgagtaagg ttgaaatcat
      901 gccgctgctt cgtgcagccg ctgcattccc ctgtgaaatg gggcaggcaa aaaccaatcc
      961 cgttgcgcgg ttgaatgctt ttggagacag agccagcgca aaccgcccgc ccttgatttc
     1021 cttgccgctg gaagggtcga aattcaaatg gaaaatatcg cctttgtcgg gaatatacat
     1081 ttcagacgac ctcgttgccg gcatcatcca agatttccca gccttctacg cgcggcgggg
     1141 tttcttccat ttcggcaagc aagtctgcca agcggaaacg tcgggcagca cgcacacgga
     1201 gttcgccgtt atgtacttcc gctaccaaag cgtcgccgat tttaaaatcc aattgtttca
     1261 gcatgtcggc aggcagtcgg acggccgccg agttccccca tttttggaca cgcaacataa
     1321 tcttcacctt tattgtatct acaaagtaga tacatattac cataaaattt cagttgttca
     1381 aatacttgtg cagaatacgc caaaagccgt ccgaactgtt tcggacggct tttgtactgt
     1441 atttgcgcct tcaggcaata ttttgttatc cattttcaag atgcaaaagc tttctaattg
     1501 cttgatgtcg gatttcggtt gtttagggat acaaaaccaa gtaaactaaa actgtttgat
     1561 tggaaaatgc tccgcaagga gaaaattatg ttcaaaaaat cactttataa ggctgctttg
     1621 gcgtatttcg gcgattgcgt ggctgcccat atttcagaac agttttgact gtttattcac
     1681 aaatcagatg cctttagggg gtttgctttc cataatgcaa ccaaaatttc caactctcta
     1741 aatattgtgt ctttgcgttc ttcttcgcgt attttcataa caagaggcga aactgcattc
     1801 cacaatttta tgaagttggt gcaatgcagc cgtttaaaca aatcctcatc caatactccc
     1861 gagttgattg cgcacgcata aaactcgtgc cgattgatta cggtaagtaa atgccctctc
     1921 tctttttccc attgtccgcc cttattttga taaatttcat acaggtcgat ccgcgcgttg
     1981 ttgtcgtcaa ctgccgtgcc gcgaatataa ggcgaaatat gattgtcggc ttctacaaat
     2041 tgtgcatctt ggtaatcatt caaaataaca tctaatgtcg ccttttgctt tgaagttttc
     2101 ttattgatga atattgtccc cagtgcaatg acggcggtta ctgaaacaac ggtcagttgc
     2161 caaaacatca gccattcggc cgtccctcat aggttaaact gtacgctgtg cctgaatatg
     2221 taaaataaag tgaatacaga tacaaacaag gaggttaggg caattactga caaccaacct
     2281 ccttgtttta tttgtttccg caccttacca gccattaaaa ccctcatttt tgtatttcat
     2341 cgtatttcct taatggtttt aaccttgctt gtcgatatct gtatattaat gccgtgcgcc
     2401 cgttctttca aggggtgatt taaaaatcag gcatccttga catcctctcc tgcttaaagg
     2461 cggggggact cctgccgtgt aaaccaatgc cgtctgaagg gctttcagac ggcataaaaa
     2521 aaccgccttt gtgtaaagcg gttgaagaaa agcctttcaa taaaaatgcc gtctgaattt
     2581 cagacggcat tgttgtcgga tatgcctatt ccttatccag ccggcgcagg gtttcggcga
     2641 gctgtttgaa gtcggtttct cccgccgcca aactgacaat caagtcgtca agcccttggt
     2701 cggcggcaat gctgatgccc tgcaaatcca gataggtcaa cattgttaaa agcgcggtgc
     2761 gcttgttgcc gtcgggaaag gcgtgggctt tggctatggc ttgtgcatag agggcggcga
     2821 tttcgtagat gtcctcaagg ttttcatact gccgccagtt ggcaatccgc gacaatgcgc
     2881 cgtccaagcg cgccatatcc gcccgccctt tcaaacccgc ttcatccgcc aatacggttt
     2941 gatggataag cgcgaccagt tcgccgtcta tcatttgtcg gcaagtgcct tgacggcttt
     3001 ttgatgggtt ttggcaatgc ggcgggcggc ggcaagcagt acgcgtttgc ctgcttcgcc
     3061 tttaagctcg attttgacgg ggcgtgtatt ttggttttgc atcgctgctc cttgtctgtt
     3121 tgcgggcatt ttagcttttt tccggcagct tgggaaatgc cgtccgaaaa cacttcagac
     3181 ggcattcttc taatagtgta atgcaatagt tactccaaga tttttgtata tggctgtttt
     3241 tatggtaaat taaattttca taagaaataa atatatttaa atcaatgaaa taaaatttag
     3301 tcgaatccca ccgtttccgc cacaaaacaa aaccgccctg attcggggcg gttctttttt
     3361 gttcaagttg agacctttgc aaaattcctt tccttcccga cagccgaaac ccaaacacag
     3421 gttttcagct atttccgccc caaatacctc ctaattttac cc
//
LOCUS       DAXHRP010000190         3447 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.190, whole genome shotgun sequence.
ACCESSION   DAXHRP010000190 DAXHRP010000000
VERSION     DAXHRP010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.190"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(160..2388)
                     /locus_tag="ACFM72_001963"
     CDS             complement(160..2388)
                     /locus_tag="ACFM72_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0030256 - type I protein secretion system
                     complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HFC6258476.1"
                     /translation="MRSAVLFIYFFLLNIFLFQPAVIHIQSNYILFMSIVSAPLPALS
                     ALIILAHYHGIAANPADIQHEFCTSAQSDLNETQWLLAAKSLGLKAKVVRQPIKRLAM
                     ATLPALVWCDDGNHFILAKTDGEGEHAQFLIQDLVTNKSAVLSFAEFSNRYSGKLILV
                     ASRASVLGSLAKFDFTWFIPAVIKYRRLFFEVLVVSVVLQLFALITPLFFQVVMDKVL
                     VHRGFSTLDVVSVALLVVSLFEIVLGGLRTYLFAHTTSRIDVELGARLFRHLLSLPLS
                     YFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLAFSFIFLAVMWYYSSTLTWVVLA
                     SLPAYAFWSAFISPILRTRLNDKFARNADNQSFLVESITAVGTVKAMAVEPQMTQRWD
                     NQLAAYVASGFRVTKLAVVGQQGVQLIQKLVTVATLWIGARLVIEGKLTVGQLIAFNM
                     LSGQVAAPVIRLAQLWQDFQQVGISVARLGDILNAPTENASSHLALPDIRGEITFEHV
                     DFRYKADGRLILQDLNLRIRAGEVLGIVGRSGSGKSTLTKLVQRLYVPEQGRVLVDGN
                     DLALAAPAWLRRQVGVVLQENVLLNRSIRDNIALTDTGMPLERIIEAAKLAGAHEFIM
                     ELPEGYGTVVGEQGAGLSGGQRQRIAIARALITNPRILIFDEATSALDYESERAIMQN
                     MQAICANRTVLIIAHRLSTVKTAHRIIAMDKGRIVEAGTQQELLAKPNGYYRYLYDLQ
                     NG"
     gene            complement(3057..3447)
                     /locus_tag="ACFM72_001964"
                     /pseudo
     CDS             complement(3057..3447)
                     /locus_tag="ACFM72_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          986 a          921 c          770 g          770 t
ORIGIN      
        1 agatgagtga aaaagaagtg caggctgcct aaaaagacag aaaaagtctt tccggcagcc
       61 tgcactttgg tttcatttca gtcagtaaac ccagtaaacg acggtctgaa aacgcagaac
      121 gttacgaaaa aagcagccta cacgcccatc ccccgccttc tacccgttct gtaaatcata
      181 cagatagcgg taatatccgt tcggcttcgc cagcaattcc tgctgtgttc ccgcttccac
      241 aatcctgcct ttatccatgg caatgatccg gtgtgccgtt ttaacggtgg acagacggtg
      301 ggcgataatc agcaccgtcc ggttggcgca aatggcctgc atgttctgca taatcgctcg
      361 ttcactttca taatccagcg cgctggtggc ttcatcaaaa atcagaatgc gcggattggt
      421 gattaacgcg cgggcaatcg caatacgctg ccgctgtccg cccgacaagc cggccccttg
      481 ttcgcccacc acggtgccgt agccttccgg cagctccata ataaactcgt gtgcgcccgc
      541 cagtttggct gcttcgataa tgcgttccag cggcataccc gtatccgtca gcgcgatatt
      601 gtcgcgtatg ctgcggttga gcagcacatt ctcctgcaag accacgccga cctgccgccg
      661 cagccaggca ggagcggcca aagccaaatc gttgccgtcc accaacaccc gtccctgctc
      721 cggtacatac agacgctgca ccaatttggt gagtgtggat ttgcccgacc ccgaacgtcc
      781 cacaatcccc agcacttccc ccgcccgaat ccgcaggttc aaatcctgca aaatcagcct
      841 gccgtccgcc ttatagcgga aatcgacatg ttcgaacgta atctcccccc ggatatcggg
      901 caaagccaaa tgcgaagacg cattctcggt cggcgcattc agaatatccc ccaaacgcgc
      961 caccgaaatc cccacctgct ggaaatcctg ccacaactgc gccaaacgga taacaggcgc
     1021 cgccacctgt cccgagagca tattaaacgc aatcagctgc cccaccgtca gcttgccctc
     1081 aattaccagc cgtgcgccaa tccacaacgt cgccaccgtc accagcttct gaatcagctg
     1141 caccccctgc tggccgacca ccgccaactt cgttacccga aatcccgaag ccacataagc
     1201 cgccaactga ttgtcccaac gctgcgtcat ctgcggctcc accgccatcg cctttaccgt
     1261 acccaccgca gtgatgcttt ctactaaaaa cgactggttg tctgcattgc gcgcgaactt
     1321 atcgttcaga cgcgtccgca gtatcggact gataaatgcc gaccaaaacg cataggcagg
     1381 caacgaagcc aataccaccc aagtcagagt ggagctgtaa taccacatca ccgccagaaa
     1441 gataaacgaa aacgccaaat ccaacaccga agtcagcgcc tgaccggtca ggaaattgcg
     1501 aatctgctcc aattcccgca cccgagccac cgtatcaccc actcgtctgt gctcgaaata
     1561 ggataaaggc agggaaagca gatgccggaa caaacgcgcg cccaattcca catcaatacg
     1621 tgaagtcgta tgtgcaaaca gatacgtccg caaaccgccc aacacaatct caaacagcga
     1681 caccaccaac aaagccaccg acaccacatc caaagtagag aatccccgat gtaccagcac
     1741 cttgtccatc accacttgga aaaacagagg cgtaatcagc gcaaacagct gcaacaccac
     1801 cgacaccacc aatacttcaa aaaacaaccg gcggtatttg attaccgccg gaataaacca
     1861 ggtaaagtca aactttgcca aactgcccaa taccgaagcg cgggaagcaa ccaatatcag
     1921 tttgcccgaa tatctgttag aaaattcggc aaaagacaat accgcagact tattcgtaac
     1981 caaatcctgt atcaaaaatt gggcatgctc accctcaccg tctgttttgg ccaaaatgaa
     2041 atggttgccg tcatcacacc ataccaatgc gggtaaagtc gccatagcca aacgtttaat
     2101 aggctggcgg actacctttg ccttcaatcc caaagatttg gcggctaaca gccattgcgt
     2161 ttcatttaaa tcgctctgtg cggaagtaca aaattcatgc tgtatatcgg caggattggc
     2221 ggcaatgccg tggtaatggg cgaggatgat gagggcggaa agggcgggga gcggtgcgga
     2281 tacgatagac ataaataaaa tatagttaga ttggatgtgg ataacggctg gctggaaaag
     2341 gaatatatta agtagaaaga aatatataaa taaaacagca gaacgcattg taaggatata
     2401 tatgggaatt gtaaagagaa agtatggaaa agttctcgtt tcaggaaggt aaaacggctt
     2461 aggaatcgag ttagatgagg atgcctcgca cctctcgtgc ctcctgcata ccgttaaggc
     2521 acagggttaa ggtgcaggct gctccgaact ctgttgcggt cgggtaatgt tattttttgt
     2581 gtttcaggca gcctgaaata tctgtatatt tttgttttaa atagatttta aagattgata
     2641 actgttcttg acgatttttc aagaaaggag taaatttcaa gaaaggagta aagtgactta
     2701 ttatcaatga caagcaacgc gcgaagtgac aaggaaaact atctacttaa attctaagga
     2761 ggcttcgaat atcataaacc aatcagaaac atagagataa aaattatgta caaatataat
     2821 cctcttatac aatttattgc acagttgatt atgtcttatg gagcaagcgt agggtgggca
     2881 cttgctgccc cacgcgtttc atatttcaag gcagcctgaa accgtgtggg cataaatgcc
     2941 taccctacat cccaaaaaac aagcgcagcc tgcgtgtgta gggtgcgaac tttcggcagg
     3001 tagacacgca gttttatatt ttcaagctga gggatgctta agaaaagtac aaaacattaa
     3061 aaaataaggg gctgtactag attagcccta aatccacacc aatcccgcaa gatttttagc
     3121 tgtcgggacg gtgtgccgaa gttaaatcga aattcgcatt ctttcaagaa cagcgggaaa
     3181 gatttgcgat caattccgtt ctatttgcgc aagacgcgtt ttgcctgatt ccaaaagttc
     3241 tcaatgccgt ttatgtggtt ctgacggtca gcaaattcct tggaatggtt gatgcggtaa
     3301 tggataaaac cgcttacgtc caacttgtcg cagctgctca gactatcggt ataaacaata
     3361 ctgtccggca tgattttctt tttgatgaca gggagtaacg tttcagactt ggcattgttt
     3421 acgacaacgg tatagacccg tccgttg
//
LOCUS       DAXHRP010000191         3391 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.191, whole genome shotgun sequence.
ACCESSION   DAXHRP010000191 DAXHRP010000000
VERSION     DAXHRP010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.191"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            84..196
                     /locus_tag="ACFM72_001965"
                     /pseudo
     CDS             84..196
                     /locus_tag="ACFM72_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            227..3325
                     /locus_tag="ACFM72_001966"
                     /pseudo
     CDS             227..3325
                     /locus_tag="ACFM72_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
BASE COUNT          995 a          820 c          868 g          708 t
ORIGIN      
        1 cctacgatgg acacaaccgc cccgcattcc gccgcagcca accaaagcag cctgcacatt
       61 ttcaggcagc ccaatccgaa catcaaaccg tttatagtga attaaattta aatcaggaca
      121 aggcggcgag ccgcagacag tacaaatagt acggcaaggc gagccaacgc agtaccggtt
      181 taaatttaat tcactataaa acccgacacc gcaaaggacg acccatatga acctcgaaac
      241 taaacccatc gctgaaacgc cgaatttcat cgtgctcgac caatatgaaa aaatcgaaca
      301 gtcgggcagc taccaatcgg aaaaccagtt ggaagcggag ttaatcgccg atttgcagaa
      361 tcagggttac gaataccgca aagacttgaa cagccaaagc aggctgctgg aaaacctgcg
      421 cgcgcagttg cagcggctga acgatgtggc gttttcagac ggcgaatggg cgcggttttt
      481 aacggaatat ctggacaggc cgtctgaaaa cattaccgac aaaacccgca aaatccacga
      541 cgaccatatt tacgatttcg cttttgatga cggccgtctg aaaaacattt atctgctgga
      601 caagaaaaac cttgcccgca accatgtgca gcttatcaac tagtttgagc agacgggcac
      661 gcatgcaaac cgttatgacg ttaccgtgtt ggtaaacggc ctgccgctgg tgcagattga
      721 attgaaaaag cgcggtgtgg cggtgcgtga agcattcaat caggtgcacc gttacagcaa
      781 agagagcttc aacagcgaca attcgttgtt caaattcctg caaatcttcg tcatttccaa
      841 cggcacggac acgcgctatt tcgccaacac caccaagcgc gacaaaaaca gcttcgattt
      901 cacgatgaat tgggcgcggt cggacaatca tccgattaag gatttgaaag actttaccgc
      961 cacgttcctg caaaaaagcg tattactgag cgttttgctg cattacagcg tgttcgatgc
     1021 gaatgatacg ctgctgatta tgcggccgta ccagattgcc gccgccgaac gcattctgtg
     1081 gaaaattaac agttcggcgc aggcgaagaa ttggagcaaa ccggaaagcg gcggctatgt
     1141 ttggcacacc acgggcagcg gcaaaacgct gaccagcttt aaggcggcgc gtctggcgac
     1201 ggaatcggcg tttatcgaca aggttttctt cgtggtggac aggaaggatt tggactacca
     1261 gacgatgaag gaataccagc gtttttcgcc cgacagtgtg aacggttcgg aaagtacggc
     1321 gggcttgaaa cgcaatttgg aaaaagacga caacaaaatc atcgttacca ccatccaaaa
     1381 gctgaacaac ctgatgaaga gtgaagataa tctgccggtt taccatcagc gagttgtctt
     1441 tattttcgac gaatgccacc gctcgcaatt cggcgaagcg caaaaaaacc tgaaaaagaa
     1501 atttaaaaaa ttctgccagt tcggctttac cggcacgccg atttttcccg aaaacgcttt
     1561 gggcgcggaa accacggcgg gcgtgttcgg gcgggagttg cattcttatg tgattaccga
     1621 tgccatccgc gatgaaaaag tattgaaatt caaagtggat tacaacgatg tgcgcccgca
     1681 gttcaaagcc gtggaagcgg aacaggacga gaagaaactg agtgccgccg aaaaccgcca
     1741 agccctgctg caccccgaac gcatccgcga aatcacgcaa tatatcctga atcagttcag
     1801 gcagaaaacg caccgcctga acgctggcgg taaaggattt aacgcgatgt ttgccgtcag
     1861 cagcgtggat gcggcgaagt gctattacga agcgttcaaa acgcaacagg caggcagcct
     1921 gcacccgttg aaagtggcta ctattttttc ctttgccgcc aacgaagagc aaaacgccgt
     1981 cggtgaaatt gttgacgaga cctttgaacc ggaagcgatg gacagcagcg caaaagaatt
     2041 tttgcaggct gccatcaacg attacaacgc ctgtttcaaa accaatttcg gcacggacag
     2101 caaagccttt cagaactact accgcgattt ggcaaaacgg gtgaaaaatc aggaagtgga
     2161 tttgctgatt gtggtcggta tgtttttgac gggttttgac gcgccgacgc tgaacacgtt
     2221 gtttgtcgat aaaaacctgc gctatcacgg cctgatgcag gcgttttcgc gcaccaaccg
     2281 catttacgat gccaccaaaa ccttcggcaa tattgtctgc ttccgtgatt tggagcaggc
     2341 aaccattgat gcgattaccc tgtttggcga taaaaacacc aaaaacgtag tgctggaaaa
     2401 aagttacgaa gaatacatga acggctatac cgacagactg accggagaag cgcggcgcgg
     2461 ctatttggat gtggcaaaag agttgcgcga acgtttcccc gatccccacg aaatcgaaac
     2521 ggaaaaagac aaaaaagatt ttgccaaact tttcggtgaa tacctgcggg cggaaaacgt
     2581 attgcagaac tacgatgaat ttgccgcgct gcgcgagttg cagaatgtgg atgcggcgga
     2641 cgaagatgct atgaaggcgt ttcaggaaaa atactacctg agcgatgaag acgtgcagga
     2701 aatgcggcaa gtgccgatgc cgtctgaaag agccgtgcag gattaccgtt ccgcctataa
     2761 cgacatccgc gattggttgc gccgccaaaa agcaggcgaa cagaaagaac agtcaaaaat
     2821 cgactgggac gatgtggttt ttgaggtgga tttgctcaaa tcgcaggaaa tcaatctgga
     2881 ttacatcctg caactggttt tcgagcatca caaaaaaatc aaaggcaaag cggagctggt
     2941 agaagaaatc cgccgcatca tccgcgcaag tatcggacac cgcgccaaag aagggctgat
     3001 tgtggatttc atcaacgata cggatttgga caaagtgccc gacgttcccg ccatactgga
     3061 aaccttttac acctatgcgc aagaggtgat gcggcacgaa gcggcaggat tgattgccgc
     3121 cgaaggtttg aacgaaaccg ccgccaaacg ctatttaatc agctcgctca aacgcggcta
     3181 tgccagcgaa aacggtacgg aactgaccga aaccctgccg aaaatgagtc cgatcaaccc
     3241 gcaatatctg acgaagaaac aaagtgtttt tcaaaagatt gcggcgtttg tggagaagtt
     3301 tgccggaata gggaccgata tttgacaaaa tgccgtctga acctttcaga cggcattttt
     3361 gattttatgc agaggcggtt tttatagtgg a
//
LOCUS       DAXHRP010000192         3216 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.192, whole genome shotgun sequence.
ACCESSION   DAXHRP010000192 DAXHRP010000000
VERSION     DAXHRP010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.192"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            110..2875
                     /gene="tdfH"
                     /locus_tag="ACFM72_001967"
     CDS             110..2875
                     /gene="tdfH"
                     /locus_tag="ACFM72_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HFC6258477.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRTGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQTGGLKFNSDSGKWER
                     DFQRQFWKHKLYKKYDDPQELQKYIEGQDKDWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYKKHCNRSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNFRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     ITMSYKF"
     gene            2918..3160
                     /locus_tag="ACFM72_001968"
     CDS             2918..3160
                     /locus_tag="ACFM72_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258478.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPQKRESRHSMLRQFIEND"
BASE COUNT          907 a          794 c          783 g          732 t
ORIGIN      
        1 attgaaatct tcagacggta tatcgaattt acacttttta atgtttatgc cgcctaaaaa
       61 aatgctaata tatttcttaa ttgtctgact gtttattgtt gaggaaaata tgagatcttc
      121 tttccggttg aagccgattt gtttttatct tatgggtgtt atgctatatc atcatagtta
      181 tgccgaagat gcagggcgca cgggcagcga ggcgcagata caggttttgg aagatgtgca
      241 cgtcaaggcg aagcgcgtac cgaaagacaa aaaagtgttt accgatgcgc gtgccgtatc
      301 gacccgtcag gatatattca aatccagcga aaacctcgac aacatcgtac gcagcatccc
      361 cggtgcgttt acacagcaag ataaaagctc gggcattgtg tctttgaata ttcgcggcga
      421 cagcgggttc gggcgggtca atacgatggt ggacggcatc acgcagacct tttattcgac
      481 ttctaccgat gcgggcaggg caggcggttc atctcaattc ggtgcatctg tcgacagcaa
      541 ttttattgcc ggactggatg tcgtcaaagg cagcttcagc ggctcggcag gcatcaacag
      601 ccttgccggt tcggcgaatc tgcggacttt aggcgtggat gacgtcgttc agggcaataa
      661 tacctacggc ctgctgctaa aaggtctgac cggcaccaat tcaaccaaag gtaatgcgat
      721 ggcggcgata ggtgcgcgca aatggctgga aagcggagca tctgtcggtg tgctttacgg
      781 gcacagcagg cgcagcgtgg cgcaaaatta ccgcgtgggc ggcggcgggc agcacatcgg
      841 aaattttggc gcggaatatc tggaacggcg caagcagcga tattttgtac aaacaggggg
      901 gttgaaattc aattccgaca gcggaaagtg ggagcgggat ttccaaaggc aattctggaa
      961 acacaagttg tataaaaaat acgatgaccc ccaagaactg caaaaataca tcgaaggtca
     1021 agataaagac tggcgggaaa acctggcgcc gcaatacgac atcaccccca tcgatccgtc
     1081 cagcctgaag cagcagtcgg caggcaatct gtttaaattg gaatacgacg gcgtattcaa
     1141 taaatacacg gcgcaatttc gcgatttaaa caccaaaatc ggcagccgca aaatcatcaa
     1201 ccgcaattat cagttcaatt acggtttgtc tttgaacccg tataccaacc tcaatctgac
     1261 cgcagcctac aattcgggca ggcagaaata tccgaaaggg tcgaagttta caggctgggg
     1321 gcttttaaag gattttgaaa cctacaacaa cgcgaaaatc ctcgacctca acaacaccgc
     1381 caccttccgg ctgccccgcg aaaccgagtt gcaaaccact ttgggcttca attatttcca
     1441 caacgaatac ggcaaaaacc gctttcctga agaattgggg ctgtttttcg acggtcctga
     1501 tcaggacaac gggctttatt cctatttggg gcggtttaag ggcgataaag ggctgctgcc
     1561 ccaaaaatca accattgtcc aaccggccgg cagccaatat ttcaacacgt tctacttcga
     1621 tgccgcgctc aaaaaagaca tttaccgctt aaactacagc accaataccg tcggctaccg
     1681 tttcggcggc gaatatacgg gctattacgg ctcggatgac gaatttaagc gggcattcgg
     1741 agaaaactcg ccgacataca agaaacattg caaccggagc tgcgggattt atgaacccgt
     1801 attgaaaaaa tacggcaaaa agcgcgccaa caaccattcg gtcagcatta gtgcggactt
     1861 cggcgattat ttcatgccgt tcgccagcta ttcgcgcaca caccgtatgc ccaacatcca
     1921 agaaatgtat ttttcccaaa tcggcgactc cggcgttcac accgccttaa aaccagagcg
     1981 cgcaaacact tggcaatttg gcttcaatac ctataaaaaa ggactgttaa aacaagatga
     2041 tacattagga ttaaaactgg tcggctaccg cagccgcatc gacaactaca tccacaacgt
     2101 ttacgggaaa tggtgggatt tgaacgggga tattccgagc tgggtcagca gcaccgggct
     2161 tgcctacacc atccaacacc gcaatttcaa agacaaagtg cacaaacacg gttttgagtt
     2221 ggagctgaat tacgattatg ggcgtttttt caccaacctt tcttacgcct atcaaaaaag
     2281 cacgcaaccg accaacttca gcgatgcgag cgaatcgccc aacaatgcgt ccaaagaaga
     2341 ccaactcaaa caaggttatg ggttgagcag ggtttccgcc ctgccgcgag attacggacg
     2401 tttggaagtc ggtacgcgct ggttgggcaa caaactgact ttgggcggcg cgatgcgcta
     2461 tttcggcaag agcatccgcg cgacggctga agaacgctat atcgacggca ccaacggggg
     2521 aaataccagc aatttccggc aactgggcaa gcgttccatc aaacaaaccg aaactcttgc
     2581 ccgccagcct ttgatttttg atttttacgc cgcttacgag ccgaagaaaa accttatttt
     2641 ccgcgccgaa gtcaaaaatc tgttcgacag gcgttatatc gatccgctcg atgcgggcaa
     2701 tgatgcggca acgcagcgtt attacagttc gttcgacccg aaagacaagg acgaagacgt
     2761 aacgtgtaat gctgatggct tgtgcaacgg caaatacggc ggcacaagca aaagcgtatt
     2821 gaccaatttt gcacgcggac gcaccttttt gataacgatg agctacaagt tttaaaggca
     2881 gcccgcgttt tgtggaaaac cgcaaaaaaa agccaaaatg ccgtctgaaa gcccttcaga
     2941 cggcatttgt ttccccaaac gcatcatcct gccgcaagcc tatgccaatc cgttttatcg
     3001 catcggcaac tcaaagaaaa atccatttca ttcccacgca gggaagccgg tttttgattt
     3061 cggttatttt tggttgtttc gggtaattta tgagtcgtca ttcccgcaaa agcgggaatc
     3121 tagacattca atgctaaggc aatttatcga aaatgactga aactcaaaaa actggattcc
     3181 cactttcgtg ggaatgacgc ggtgcaggtt tccgta
//
LOCUS       DAXHRP010000193         3129 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.193, whole genome shotgun sequence.
ACCESSION   DAXHRP010000193 DAXHRP010000000
VERSION     DAXHRP010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.193"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            457..780
                     /locus_tag="ACFM72_001969"
     CDS             457..780
                     /locus_tag="ACFM72_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC6258479.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            894..3071
                     /gene="tdfF"
                     /locus_tag="ACFM72_001970"
     CDS             894..3071
                     /gene="tdfF"
                     /locus_tag="ACFM72_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HFC6258480.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMHDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRNAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT          755 a         1092 c          790 g          492 t
ORIGIN      
        1 ccgcccaagc aaacctgcgg tttgccgccc tctccctagc cctctcccac agggagaggg
       61 gattggggtg caggctgtct ttaaggttca ggcaaatttt taacttcgtt gaagctgcga
      121 tttcagaagc tccgttttag cttcgcagaa actccgcttc cttcgaaagc tccgttttca
      181 gacgaccttt tggagtaccg caggcacacg catcgaacgg ctgaatcaaa gattcagacc
      241 gatggcagtc cgcacccgag tttatgcggc aaacagcgag gctacggcaa cccgccccct
      301 ctccctgtgg gagagggtta gggagagggc ggtaagccgc aggcttacat caaagccgat
      361 aacgcttccg ttacaactcc gcccactgaa agcagcctgc aacgaagcca aaacgacaaa
      421 ccgcatcgta aaccacccaa cccataggag aaccccatgc aaaacgaaac catcaacctg
      481 aaacagcacc ttgccgccat caaagaatac tggcagcccg aaatcatcaa ccgccacggg
      541 ttccaattcc gtttggtcaa acttttgggc gattacggct ggcatacgca cggatacagc
      601 gacaaagtgc tgtttgccgt ggagggcgac atggcggtgg acttcgccga cggcggcagc
      661 atgacgatac gcgagggcga gatggcggtc gtgccgaagt cggtgtcgca ccgcccgcgt
      721 tcggaaaacg gctgctcgtt ggtgctgatt gagttgtccg acccgtccga ggccgtctga
      781 aaacgaagtt tccgaaggaa gctgagtttc tgcgaagcta aaagcagcct gcaccttcaa
      841 tcaatatgcc gaaaatacaa ccccaccgca caccaacaca caaaggaaat cccatgacac
      901 gcttcaaata ttccctgctg tttgccgccc tgttgcccgt gtacgcgcag gccgatgttt
      961 ctgtttcaga cgaccccaaa ccgcaggaaa gcactgaatt gccgaccatc accgttaccg
     1021 ccgaccgcac cgcgagttcc aacgacggct acactgtttc cggcacgcac accccgctcg
     1081 ggctgcccat gaccctgcgc gaaatcccgc agagcgtcag cgtcatcaca tcgcaacaaa
     1141 tgcacgacca aaacatcaaa acgctcgacc gcgccctgtt gcaggcgacc ggcaccagcc
     1201 gccagattta cggctccgac cgcgcgggct acaactacct gttcgcgcgc ggcagccgca
     1261 tcgccaacta ccaaatcaac ggcatccccg ttgccgacgc gctggccgat acgggcaatg
     1321 ccaacaccgc cgcctatgag cgcgtagaag tcgtgcgcgg cgtggcgggg ctgctggacg
     1381 gcacgggcga gccttccgcc accgtcaatc tggtgcgcaa acgcccgacc cgcaagccat
     1441 tgtttgaagt ccgcgccgaa gcgggcaacc gcaaacattt cgggctgggc gcggacgtat
     1501 cgggcagcct gaacaccgaa ggcacgctgc gcggccgcct ggtttccacc ttcggacgcg
     1561 gcgactcgtg gcggcagcgc gaacgtagcc gcaatgccga actctacggc attttggaat
     1621 acgacatcgc accgcaaacc cgcgtccacg caggcatgga ctaccagcag gcgaaagaaa
     1681 ccgccgacgc gccgctcagc tacgccgtgt acgacagcca aggttatgcc accgccttcg
     1741 gcccgaaaga caaccccgcc acaaattggg cgaacagccg ccaccgtgcg ctcaacctgt
     1801 tcgccggcat cgaacaccgc ttcaaccaag actggaaact caaagccgaa tacgactaca
     1861 cccgcagccg cttccgccag ccctacggcg tagcaggcgt gctttccatc gaccacaaca
     1921 ccgccgccac cgacctgatt cccggttatt ggcacgccga cccgcgcacc cacagcgcca
     1981 gcgtgtcatt gatcggcaaa taccgcctgt tcggccgcga acacgattta atcgcgggta
     2041 tcaacggtta caaatacgcc agcaacaaat acggcgaacg cagcatcatc cccaacgcca
     2101 ttcccaacgc ctacgaattt tcccgcacgg gtgcctaccc gcagcctgca tcgtttgccc
     2161 aaaccatccc gcaatacggc accaggcggc aaatcggcgg ctatctcgcc acccgtttcc
     2221 gcgccgccga caacctttcg ctgatactcg gcggcagata cagccgttac cgcaccggca
     2281 gctacgacag ccgcacacaa ggcatgacct atgtgtccgc caaccgtttc accccctaca
     2341 caggcatcgt gttcgacctg accggcaacc tgtctcttta cggctcgtac agcagcctgt
     2401 tcgtcccgca atcgcaaaaa gacgaacacg gcagctacct gaaacccgta accggcaaca
     2461 atctggaagc cggcatcaaa ggcgaatggc ttgaaggccg tctgaacgca tccgccgccg
     2521 tgtaccgcgc ccgtaaaaac aacctcgcca ccgcagcagg acgcgacccg agcggcaaca
     2581 cctactaccg cgccgccaac caagccaaaa cccacggctg ggaaatcgaa gtcggcggcc
     2641 gcatcacgcc cgaatggcag atacaggcag gttacagcca aagcaaaacc cgcgaccaag
     2701 acggcagccg cctgaacccc gacagcgtac ccgaacgcag cttcaaactc ttcactgcct
     2761 accactttgc ccccgaagcc cccagcggct ggaccatcgg cgcaggcgtg cgctggcaga
     2821 gcgaaaccca caccgaccct gccacgctcc gcatccccaa ccccgccgcc aaagcccgcg
     2881 ccgccgacaa cagccgccaa aaagcctacg ccgtcgccga catcatggcg cgttaccgct
     2941 tcaatccgcg cgccgaactg tcgctgaacg tggacaatct gttcaacaaa cactaccgca
     3001 cccagcccga ccgccacagc tacggcgcac tgcggacagt gaacgcggcg tttacctatc
     3061 ggtttaaata aggtcgtctg aaaacggagt ttctgcgaag ctatagtgga ttaacaaaaa
     3121 ccagtacgg
//
LOCUS       DAXHRP010000194         3111 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.194, whole genome shotgun sequence.
ACCESSION   DAXHRP010000194 DAXHRP010000000
VERSION     DAXHRP010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.194"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            272..895
                     /locus_tag="ACFM72_001971"
     CDS             272..895
                     /locus_tag="ACFM72_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFC6258481.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1006..2388
                     /locus_tag="ACFM72_001972"
     CDS             1006..2388
                     /locus_tag="ACFM72_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC6258482.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFILGIACIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2392..2916
                     /locus_tag="ACFM72_001973"
     CDS             2392..2916
                     /locus_tag="ACFM72_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC6258483.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          628 a          844 c          937 g          702 t
ORIGIN      
        1 gcctgctgcc gcccgaaaag cgtgatgcgc tgatggtgct gctgcataat ccggacgacg
       61 gataaccggt gaaaacggaa aatgcccggg tggtgttgcc tgtgcctgtt tggacaagcg
      121 ttcttgaggg cggtaaaatc aaggtttgcc cgaaaagggc agggcgatat gccgcgcttg
      181 gattttgtgc gcggtttttc gcattgaaag caattatgtc tgtttgaata tttaatgccg
      241 tctgaaacgt ccggacgcgc ccccgttccc tatgaaaaaa ccgaccgata ccctacccgt
      301 taatctgcaa cgccgccgcc tgttgtgtgc cgccggtgcg ttgttgctca gtcctctggc
      361 gcacgccggc gcgcaacgtg aggaaacgct tgccgacgat gtggcttccg tgatgaggag
      421 ttctgtcggc agcgtcaatc cgccgaggct ggtgtttgac aatccgaaag agggcgaacg
      481 ttggttgtct gccatgtcgg cacgtttggc aaggttcgtc cccgaggagg aggagcggcg
      541 caggctgctg gtcaatatcc agtacgaaag cagccgggcc ggtttggata cgcagattgt
      601 gttggggctg attgaggtgg aaagcgcgtt ccgccagtat gcaatcagcg gtgtcggcgc
      661 gcgcggcctg atgcaggtta tgccgttttg gaaaaactac atcggcaaac cggcgcacaa
      721 cctgttcgac atccgcacca acctgcgtta cggctgtacc atcctgcgcc attaccggaa
      781 tcttgaaaaa ggcaacatcg tccgcgcgct tgcccgcttt aacggcagct tgggcagcaa
      841 taaatatccg aacgccgttt tgggcgcgtg gcgcaaccgc tggcagtggc gttgattttg
      901 aacccgcgcc gcaaccgaaa tacggcgaat cctgtataat ccgaaaatct gttcactgga
      961 agttcagacg gcattgcaac tgttgatgcc gtctgaaaaa atatgatggc aagagacaac
     1021 cgcatccaaa tgtttccgca cgaatggcgc gccagtacga cgctttccgg cgtgtacgcg
     1081 ctgcgtatgc tgggtatgtt cctcgtgctg cccgtattgg cggtgtatgc cgcctcgctg
     1141 cccggcgcgg aaggcaacaa aacgctggtc gggctggcaa tgggcattta cgggctgaca
     1201 caggctctgc tgcaactgcc tttgggcatc gcttccgaca agttcgggcg caagaaaacc
     1261 atttatgtcg ggctgattgt gtttgcagcg ggcagcttcc ttgccgccgc cgccgatacg
     1321 ctgcccatgc tggtcgccgc acgcgccata cagggtgcgg gagcggtcag tgcggcggtt
     1381 accgcgctgc tggcggattt gacgcgcgac ggcgtacgta cccgcgcgat ggcgatgatc
     1441 ggtttgagta tcggtctgac gttttcggtc agcctcgtcg ttgcccctgt gattgccgac
     1501 gcggtgggcg tacgcggctt gtttctgctg accggtattt tgaccgttgc cagtatcggc
     1561 gtggtggcgt ggatgactcc cgacccggag gtttccaagc tgcacgaaga tacgcaggcg
     1621 cagccttcgc gcataggcga agttttgaaa aaccgtaggc tgctgacgct cgatttcggc
     1681 attttcgccc tgcacgccgc gcaaatggca ttgtttaccg cgctgccttt tgcgatgacg
     1741 cagctcggtt tggaaaaaat ccagcattgg aaagtctatc tgccctcgac cattacgggc
     1801 ttggtggtga tggttccgct gattatcgtc ggcgagacgc gcaacaagct caaacaggtt
     1861 tttatcttgg gcatcgcctg catcgcggcg gcacagctcg gtttgctgtc cggtatgcgc
     1921 tcggtaggct tgattaccgc ttatttggtt gtttacttta tcggttttaa tgtgttggaa
     1981 gcgagcctgc cgtctatggt ttccaaaatc gcgccgtccg acctgaaggg tacggcgatg
     2041 ggcgtgtaca acacgatgca gtcgctcgga ctgtttgccg gcggcgtggc aggcggtttg
     2101 ctgtttcaaa aatacggctt ttccggcgtg tttgcctttt gcagcatatt gatgctgctg
     2161 tggctggtaa ttgccgtttt atcgcctgcg cccaagcccg tcaaaaacct cagttaccct
     2221 gtcggcggcg tgtggcaggg caatcaggaa gggttatacc gcgccttgtc ggagcttgag
     2281 ggtgtggaag acatcggttt cagtttcgac gggcagaccg tctatctcaa agtgttgcag
     2341 aagggtttcg atcaggctgc cgctgaaaaa atcatcacag gagtttaaaa aatgtcattg
     2401 aacaaagtca tcctcatcgg ccgcctcgga cgcgatcccg aagtgcgcta tatgcccaac
     2461 ggcgaggcgg tttgtaattt cagcgtcgcc accagcgaaa cttggaacga ccgcaacggc
     2521 caacgtgtag agcgtactga gtggcacaac atcaccatgt accgcaaact ggcggaaatt
     2581 gccgggcaat acctcaaaaa aggcgggctg gtttatctgg aaggcagaat ccaaagccgc
     2641 aaataccaag gcaaagacgg catcgaacgc accgcttacg atattgtcgc caacgaaatg
     2701 aaaatgttgg gcgggcgcaa tgaaaacagc ggcggtgcgc cttacgagga aggttacggt
     2761 cagagtcagg aggcttacca acgccccgcg cagcaaagcc ggcagcccgc ctccgacgcg
     2821 ccgtcccatc cccaagaagc accagccgcg ccgcgccgcc aacccgtgcc tgccgccgcc
     2881 ccggtcgagg acattgacga cgatatcccg ttctgaattt tacggccgga catcctcgcg
     2941 gagggaaatc ataaaggacg gagaaacctt aaaccttacg gggcagggtt tctctttttt
     3001 gcatttgggc cggcttgttg ccgccctttg cgttgggcgg aacgttgcga ttgcgccgtt
     3061 cgggcgtttt gaggcagtga tgcctgccgc acgtccccgc tgttttcaga c
//
LOCUS       DAXHRP010000195         3051 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.195, whole genome shotgun sequence.
ACCESSION   DAXHRP010000195 DAXHRP010000000
VERSION     DAXHRP010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.195"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..460
                     /locus_tag="ACFM72_001974"
     CDS             <1..460
                     /locus_tag="ACFM72_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFC6258484.1"
                     /translation="YISTINVDIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIK
                     PKDKVVLRYQAYPYQKFGHATGEIISVARTALGKQKLSGLGIIFTNPTLLNEPAYLVK
                     VKLEKQTIKAYGENKPLQIGMILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            463..2548
                     /locus_tag="ACFM72_001975"
                     /pseudo
     CDS             463..2548
                     /locus_tag="ACFM72_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
     gene            complement(2630..2932)
                     /locus_tag="ACFM72_001976"
     CDS             complement(2630..2932)
                     /locus_tag="ACFM72_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258485.1"
                     /translation="MKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGFNGDI
                     GEKLHRCAVMEWAENETVKLAQKWEQEQKKQQIQQKKETEKSPKHKASRDDWEMEH"
BASE COUNT         1004 a          532 c          515 g         1000 t
ORIGIN      
        1 ttatatatca acaattaatg ttgatatagg gcaacaagtt gaaccgtcta aattgctgtt
       61 aagcattgtc cctgaacaaa ctgaattggt cgccaatctt tacataccca gtaaagctgt
      121 tggttttatt aaaccgaaag ataaagttgt tttacgttac caagcgtacc cttaccaaaa
      181 atttggacat gccacaggag aaattatttc agttgccaga actgctctcg gtaaacaaaa
      241 gctatcaggt ttaggtatca ttttcactaa cccaacctta ttaaatgaac ctgcctatct
      301 tgtgaaagtt aaattggaaa aacaaacgat taaagcatac ggagaaaaca agccgcttca
      361 aattggcatg attttagaag cagatattct ccatgaacga aaaaaattgt acgaatgggt
      421 acttgaccca ctttacagca tttcaggaaa aatcaattaa aaatggatta tttatcaaga
      481 ctgtcctttg gatttaacaa aaagctacct gtcattctgc aaacagaagt tgctgaatgt
      541 ggtttagcat gcctgacatc catcttgtcc tattatggct ttcacactga tttaagaacg
      601 ttacgccaaa aatacaccct gtcattaaag ggcgcaaatc ttgcagacat catgagattt
      661 ggcaatgaaa tgaatttaac gccacgagct ttgcgtttag agttagatga gctgtcaaat
      721 ttacaactac cctgcattct ccattggaac ttaaaccatt ttgttgtact ttgttccatt
      781 tccaaagaca gtatcgtcat tatggaccct gctgtcggta tgcgaaaaat caaaatggac
      841 gaagtttcac aaaaattcac agggattgcc ctagaattat tccccaatac ccattttgaa
      901 gagaaaaaag aaacaaagaa aatcaaaata ttatctctat taaggggggg caggcttaaa
      961 acgctcttta attcaaatgc ttatattagc tatttctttg gaagtctttg cattggttag
     1021 tccattcttt atgcaatggg taatagacca tgtcattgta actgctgata aaaatttatt
     1081 attgaccctt actttgggat ttggtttact gactatcctg caacagttaa ttagcctgtt
     1141 acaagcatgg gtaggtatgc acctatctac aactcttaat ttacaatgga aagccaatat
     1201 atttaaaagg ttacttgact tacctaatga ctatttcagt aaacgacatt taggagatgt
     1261 gatttcaaga tttggttcaa tagatcatat ccaagaaaca ctaacttcta ctttttttgt
     1321 tttagtttta aatagcttaa tggctgtttt tactttcgtg ttaatgacaa tttacagcac
     1381 tcaattatcg ctgattgttc ttttaacact tgttttgtac atactaattc gttggcttgc
     1441 atattaccca ttaagaaatg caacagaaga aaatattgtt catgaagcca aacaaaactc
     1501 atatttcatg gaaaccattc gtggtatcca atcagttaaa ttatttgata aacattatca
     1561 aagacatggc acttggatga gcctatttgt gaatacagtc aataccaagc tgacaacaga
     1621 taaactctct gctttatttg aattttcaaa taaactgttg tttagcatgg aaaatgttat
     1681 cataatttat cttggtgcaa gcgcaatttt agatggttca tttacagtcg gtgttctgat
     1741 ggcttttttg gcttataaag ggcaatttga aagcagaaca gcttctctcg ttgaccaata
     1801 catccaaatc aaaatgttag ggcttcatgc tgaacgtttg gctgacatta ctttaaatga
     1861 aacagaaact gaaattatta agtataatca tatacctaaa ttagataatg aacaactggt
     1921 tcttaaagtt gaaaacgtct cattcagata tgctgataat gagccatatc tttttgaaaa
     1981 cattaatttg gaatttaaag ataatgaagc agttgtttta acaggacaat ctggtcgggg
     2041 gaagtccact ttgttaaaca ttttaacagg tagcctaaaa cctgaaactg gtacagttag
     2101 tattaatggg catgatatat atcaagtttc tccatccttt attaggggat tgagcgggat
     2161 tgttcgccaa gatgatgtcc tttttgcagg ttctattggg gaaaatattt cattttttga
     2221 tgaaagccca aatatggagc tcattgaaca atgtgcaaaa atggcacaaa tacatgacga
     2281 tatacttaaa atgccaatgg gctatgagac cttgattggc gatatgggaa atatcttatc
     2341 aggtggacaa aagcagagag ttatcttggc tcgtgcattg tataaacgac ccaaaattct
     2401 atttttagac gaagcaagta gccatttaga tgtagaaaat gaacaaaaaa ttaaccataa
     2461 cctaaaaagt cttggtatta tgaaaataat ggttgcacac cgccaagaaa caattcaatc
     2521 ggcagataaa attctgaatt taggttgaac agaacaagac ttcatttttc tttaacaaaa
     2581 agtgaagtct tttttcaaat aatttaatag aatacatgaa aatagcggtt taatgttcca
     2641 tttcccaatc atcacgactg gctttgtgtt ttggcgattt ttcagtttcc tttttctgtt
     2701 gaatttgttg ttttttctgc tcttgttccc atttttgggc taatttcacg gtctcatttt
     2761 cagcccattc catcacggca caacgatgta gcttttctcc gatatcgcca ttaaagccag
     2821 ctccacgaac ttcaccataa attcttgaat atttttgatt atattcaatt tcttttccat
     2881 tttctttaaa ggatttctcc cacttttcac aaacttcatc aaaatctttc aaagggatat
     2941 tttttaaggg gctgtcctag ataactaggg aaattcaaat taagttagaa ttatccctat
     3001 gagaaaaagt cgtctaagcc agtataaaca aaataaactc attgaactgt t
//
LOCUS       DAXHRP010000196         3044 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.196, whole genome shotgun sequence.
ACCESSION   DAXHRP010000196 DAXHRP010000000
VERSION     DAXHRP010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.196"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            164..1276
                     /gene="nadA"
                     /locus_tag="ACFM72_001977"
     CDS             164..1276
                     /gene="nadA"
                     /locus_tag="ACFM72_001977"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HFC6258486.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNSGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            1328..2836
                     /gene="nadB"
                     /locus_tag="ACFM72_001978"
     CDS             1328..2836
                     /gene="nadB"
                     /locus_tag="ACFM72_001978"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HFC6258487.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLSQGVAFDR
                     NHNGLHLTREGGHTCRRIAHVADYTGEAVMQSLIAQIRRCPNIRVYERQMALDIQTES
                     GAAYGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQSGERFMPHYDLRAELAPR
                     DIVARDIAAEIAKQTQDFVSLDISHQPAAFVRQHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQTVPSQRSSEHPSAEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLHR
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT          714 a          939 c          826 g          565 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaagttgag cataatataa aacagtttga aaagcagacg
      121 gcaaaccttc atgccgtctg aaaaccagct acaaggaaac atcatgcaaa ccgccgcccg
      181 ccgctcgttc gactacgata tgcccctcat ccaaacgccg acttccgcct gccaaatccg
      241 tcaggcgtgg gcgaaggttg ccgatacgcc cgaccacgag acggcaggcc gtctgaaaga
      301 cgaaatcaag gctttgctga aggagaaaaa cgcggtcttg gtggcgcatt attacgtcga
      361 tccgctgatt caggatttgg ctttggaaac gggcggatgc gtgggcgatt cgctggaaat
      421 ggcgcgcttc ggtgcggaac acgaagccgg tacgctggtg gtggctggtg tgcgcttcat
      481 gggcgagagc gcgaaaatcc tctgccctga aaaaacggtg ctgatgcctg atttggaggc
      541 ggaatgttct ttggatttgg gttgtcccga agaagcgttt tcagcgtttt gcgaccaaca
      601 ccccgaccgc acggtggtgg tgtacgccaa cacttccgcc gccgtgaaag cgcgtgccga
      661 ctgggtggta acgtcttcgg tggcgttgga aatcgtgtcg tatttgaaat cgcgcggcga
      721 gaaactgatt tggggacccg accgccacct cggcgactac atccgccgcg aaacgggcgc
      781 ggatatgctg ttgtggcagg gttcgtgcat cgtccataac gaattcaaag ggcaagagct
      841 ggcggcgttg aaggcggaac atcccgacgc ggtggtgctg gttcatcccg aatcgccgca
      901 aagcgtcatc gaactgggcg acgtggtcgg ctcgaccagc aaactgctca aagccgccgt
      961 atcgcgtcct gaaaaaaaat tcatcgtggc gaccgattta ggcatcctgc acgaaatgca
     1021 aaagcaggcg cccgacaaag aatttatcgc cgcaccgacg gcgggcaaca gcggaagctg
     1081 caaaagctgc gcgttctgcc cgtggatggc gatgaattcg ctgggcggca tcaaatacgc
     1141 cctgacaagc gggcacaacg aaatcctgtt ggacagaaag ctgggcgaag ccgccaaact
     1201 gcctttacag cgtatgctcg acttcgcggc aggactcaaa cgcggggatg tgttcaacgg
     1261 catgggcccc gcctgatttg ccgtcaatat tgccgtttca gacgacctct caaacaagga
     1321 caacaccatg caaaccgatt gcgacgtatt gattgccgga aacgggctgg cggcactgac
     1381 gctcgccctg tcgctgcctg aatcgttccg catcgtcatt ttgtgcaaaa accggctgga
     1441 cgacaccgcc agccgtcatg cgcaaggcgg gattgcggcg gcgtggtcgg gagaggacga
     1501 catcgaaaaa cacgttgccg ataccttgga agctggcgcg ggtttgtgcg acgaagccgc
     1561 cgtccgcacc atcctgtcgc agggcaaacc ggcaatcgaa tggctgctgt cgcagggcgt
     1621 ggcgttcgac cggaatcata acggcctgca cctgacacgc gaaggcgggc atacctgccg
     1681 ccgaatcgcc cacgtcgccg attacacggg cgaagccgtc atgcagagcc tgattgccca
     1741 aatacgccgc tgcccgaaca tccgcgttta cgagcggcag atggcgttgg acatccaaac
     1801 cgaatcaggc gcagcgtacg gactgaccgt cctcgactgc cgaacgcaag aaacctaccg
     1861 catccgcgcc cgccataccg tactcgcagg cggcggcttg ggacagattt acgccgccac
     1921 caccacgccg cccgaatgca cgggcgacgc catcgccatg gcaatacgcg caggctgcgc
     1981 agtcgaaaac ctcgaattta tccaattcca ccccacaggc ttggcaaggc cgtctgaaaa
     2041 cggacgcacc ttcctgattt ccgaagccgt gcgcggcgaa ggcggcattc tgaccaacca
     2101 atcgggcgaa cggtttatgc cgcattacga cctccgtgcc gaactcgcac cgcgcgacat
     2161 cgttgcccgc gacatcgccg ccgaaattgc caaacaaacg caagacttcg tctcgctcga
     2221 tatcagccat caacccgcag cgttcgtccg tcagcatttc ccgtccatcc atcggcactg
     2281 cctgtcccaa tgcggcttgg acatcacgcg ccaagccatc cccgtccgcc ccgtgcaaca
     2341 ctacacctgc ggcggcatcc aaaccgaccc ttgcggcaga acctccctgc cgcagctcta
     2401 cgccttaggc gaaaccgcct gcacagggct gcacggagcc aaccgcctcg ccagcaattc
     2461 cctgctcgaa tgcgtcgtta ccgccagact tgccgcccaa accatcgcgg acggacaagc
     2521 attccaaacc gtaccgtccc aaaggtcgtc tgaacacccc tccgccgaag caggcatctt
     2581 ttcagacggc atccaaagcg cattcagccg ccccgtcctg caagccttca accaacgcca
     2641 tctgggcatc ctccgcaacg ataccggcct gcaccgcgcc atcgcccaac tgcggctttg
     2701 gaagcaaaac caaaccgaac cgcacaccgc gtccgaatac gaaaaccgca acctgctcga
     2761 atgcagcctc gccgtcgccc aagccgcata caggcggaga cagaacatcg gcgcgcattt
     2821 taatagtgat tgttaaggtt ggctggttag aaaaaatcgt tcaaatgaat tttaatagca
     2881 tggttaagag attggcattc agtttttagg gttgcgtaag ttgggttatc aatctgttct
     2941 aaaagcagaa aggccgagac ctttgcaaaa ttccccaaaa tcccctaaat tcccaccaag
     3001 ccatttaggg gattttccat gagcaccttc ttccggcaaa ccgc
//
LOCUS       DAXHRP010000197         3031 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.197, whole genome shotgun sequence.
ACCESSION   DAXHRP010000197 DAXHRP010000000
VERSION     DAXHRP010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.197"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..215)
                     /locus_tag="ACFM72_001979"
     CDS             complement(<1..215)
                     /locus_tag="ACFM72_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFC6258488.1"
                     /translation="MLKTPPTLAAELSGKTGVSISAPYANENSRISLSAANIEAENGK
                     IKIQSYGDQYYYARQSELYTFERRSYKT"
     gene            complement(462..845)
                     /locus_tag="ACFM72_001980"
     CDS             complement(462..845)
                     /locus_tag="ACFM72_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258489.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(850..1687)
                     /locus_tag="ACFM72_001981"
                     /pseudo
     CDS             complement(850..1687)
                     /locus_tag="ACFM72_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase domain-containing protein"
     gene            complement(1989..2384)
                     /locus_tag="ACFM72_001982"
     CDS             complement(1989..2384)
                     /locus_tag="ACFM72_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258490.1"
                     /translation="MNQFCLSEYEKAFLCRIIENNMIWKEYLIEQIENSIIVSRDNTG
                     CGCYIDFQVNLERTNLNKYENIPIFFEGDITAPDKSDAATFLLYTTESLNKAGRIIDF
                     LEVAIAGTNYDEVEVYSWLKMENSLRFGL"
     gene            complement(2396..>3031)
                     /locus_tag="ACFM72_001983"
     CDS             complement(2396..>3031)
                     /locus_tag="ACFM72_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HFC6258491.1"
                     /translation="AAVGEIVGEALVKNTDFSRMSATEIEKAKAKITAYSKLVAGTAS
                     AVVGGDVNTAANAATVAVENNSLFQPQTTLEAGVRNAILRGDIQELRLLLGEANFSTA
                     DAAYAQRILASMEKIGESNSRLLAERYGVDWLNKVHHIFKGHQGSIGNTLIQKSGSME
                     NAVVATQKAVDALKLTKTGNYPVTVTVNGITVIVRVYVNNGVSRIATILKM"
BASE COUNT          877 a          605 c          517 g         1032 t
ORIGIN      
        1 gttttgtagc tgcggcgttc aaaggtatag agttcgctct gtctcgcata gtaatattgg
       61 tcaccgtaag attgaatttt gattttgccg ttttcagctt cgatgtttgc cgcactcaga
      121 ctgatgcggc tgttctcatt ggcatacggt gcgctaatgc tcacaccggt tttacccgaa
      181 agttctgcag caagcgtagg gggtgtcttc agcacgcacg cgtctgggca gtatataggg
      241 aatctgaata tttacttgca taacaaatgc cgtctgaaaa attgtgagct tttcagacgg
      301 cattgagccg taaatcatgg aacgcgtgcg tgctggagca cacaccttac gcatggattt
      361 taggtttcat gcaggctaca gcttgctgct gcggtataaa agtattttta gtgatttact
      421 gtttttggta tttttgcccg acggggttaa aaatacagtt gctactcttg ctgcatgata
      481 ttggcaagat ttaatttaaa tgtttgttga atcttgttta catccttagc aaaaatatga
      541 tagtcactcg aagaatagat agattttatt ctatccaaat tagtttgttg ataacatttt
      601 ttcatttccg cgatgaaaaa attatctttt cctctttcat tgagacagtt attttctaac
      661 agatagattg cccatgctgt aaaaataaat gtactatctt ccggatattc agataaataa
      721 atttcgaatt caattataga atattcagct gcttcaatta atgttatatc taaatccctg
      781 acaaattttt ccgttatatt tttaaataat ttcttgaatt ctatataatt ttttattttt
      841 tccatgattc tattttcctg taaaaatatt taattgaata tttggatagc gatttctaaa
      901 ctctaaaata acattgctgc aagattgaca ggcctttaat tctgtaaata gatcaattct
      961 acctgataca ttacgattat ttccgagttg ctgtgctata gtttcaagta atttatattc
     1021 tccatctata tttcttaatg ttcctctagg aggagaggca atattatgat atttatcaac
     1081 agatataggt ttaaaaattt ttgtttcagg taacgaaata aatccatgtt cccctttttg
     1141 gaaagaacta aatgcttcca tcctttgcgg taatccttta acatcaattt ttgctatcgc
     1201 aaaattccct atttgtcgat actcttccgg cagtttcatg cggactctct ggctttcagc
     1261 agttaaaagc aggagcactg tcattgctca gataacgggt aacaggtgta ggcttggccg
     1321 atattgcagc ctgtgcagat acagatcctg caaccatcaa tgtgccatta acaacctgaa
     1381 ctgtaccatg cagatattct ccattagaga ttgctttcgc tccctgtcca atgttatatc
     1441 cccctgctgc cacagtagct gctttgacac tgaagccaag cggtccgttt aataagtaaa
     1501 gtgcaggttg tgcggcaaca gctgatttgt aatcaaaaga atcataacga ctcaatgttt
     1561 gataggcttt cgataaagtg ttattaatat ctttggaagg aatagtgaga ttacccattg
     1621 actggggcgt tttcagtatc gaagctgccc aagctgtgtt acctccagag gcttggttaa
     1681 taaaatatgt tacctatgta tattgtttct tcaaaaatca accgtattgt ccttgggtga
     1741 ttttcgtacc agcacaatca gtctgcccta gttgacagat cgcgccacac tagccagata
     1801 cagcgtatca ttggtaaaac tgataatgcg gcaatataaa gaaaaacttc aatagtatgt
     1861 taacgaaatt tgacgcataa aaatacgcta aaaaattttc gcttgactaa ttaaaaatgg
     1921 gattgagcat aaaattttaa taatttatta tattattgaa aatatctcag attttcagtc
     1981 agtttatttt ataagccgaa ccgtaggcta ttttccatct ttaaccatga atagacctca
     2041 acttcatcat aatttgtgcc tgcaatagca acttccagaa agtcaataat tctacctgct
     2101 ttattcaaag actctgtagt atatagcagg aaagtcgctg catctgactt atccggtgca
     2161 gtgatgtctc cttcaaaaaa aatagggata ttttcgtatt tatttagatt agttctttct
     2221 aaatttacct gaaaatcaat gtagcaccca catcctgtat tatctctaga tactattatt
     2281 gaattttcta tttgctctat taaatattcc ttccatatca tattgttttc aataattcta
     2341 cataaaaaag ccttctcata ttcagataaa caaaactggt tcatatattc tacccttaca
     2401 ttttcaaaat agttgcaata cgagatactc cattattgac atatacgcga acaattaccg
     2461 ttataccatt gaccgttaca gtaactggat aatttcctgt ttttgtcagt tttaaagcat
     2521 ccactgcctt ttgcgtcgct acaacagcat tttccatgga gcctgatttt tgaatcaatg
     2581 tattaccgat gcttccttga tgccccttaa agatgtgatg aactttattt agccaatcta
     2641 caccgtatct ttcagccaat agtcgagaat tactttcacc tattttttcc atcgaagcta
     2701 aaatcctttg agcataggca gcatcagctg ttgaaaaatt tgcttcgccc aacaaaagcc
     2761 gtaattcctg aatatctcct cgtaaaattg catttcttac tcccgcttct aatgtggttt
     2821 gtggctgaaa gagggaatta ttctctaccg ccacagtagc cgcattcgcc gctgtattca
     2881 catccccgcc tacaacggca gacgcagtgc cggcaaccag ttttgaatag gcagtaatct
     2941 tcgctttagc tttttcgatt tcggtcgcac tcatacgact gaaatcagta ttcttaacca
     3001 aagcctcacc aacaatctca ccgactgcag c
//
LOCUS       DAXHRP010000198         2946 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.198, whole genome shotgun sequence.
ACCESSION   DAXHRP010000198 DAXHRP010000000
VERSION     DAXHRP010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.198"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(97..573)
                     /gene="greA"
                     /locus_tag="ACFM72_001984"
     CDS             complement(97..573)
                     /gene="greA"
                     /locus_tag="ACFM72_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HFC6258492.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            968..2269
                     /gene="aroA"
                     /locus_tag="ACFM72_001985"
     CDS             968..2269
                     /gene="aroA"
                     /locus_tag="ACFM72_001985"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HFC6258493.1"
                     /translation="MTESVRLPVARLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVQIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGTDVEYLGNEHYPPLHIGERQDNGE
                     HVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVIN
                     EGYRVFKIPADARYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2312..2845)
                     /locus_tag="ACFM72_001986"
     CDS             complement(2312..2845)
                     /locus_tag="ACFM72_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC6258494.1"
                     /translation="MFPPDKTLFLCLSALLLTSCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELILHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          627 a          800 c          792 g          727 t
ORIGIN      
        1 ctatttgtac tgtcttcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataatt
       61 tcctgcgtgt gtcgggtgta tcgaaatcaa gccgaatcaa atatatcgga cttcgataat
      121 gtcgtattcg cgcacgccgc ccggggcttg gacttccgcc gtatcgccct cttccttgcc
      181 aattaaggcg cgggcaatcg gtgagccgac atagattttg ccctgtttga tatccgcttc
      241 gtcttcgccg acaatttggt aggtaacgtg ttcttccgtt tccaaatctt ccagcgtaac
      301 cgtcgtaccg aacacgattt tgccttcggc gtggatttcg gtcggattga tgatgtgggc
      361 aacggaaagt ttgtgttcca gctcggaaat gcggccttcg ataaagcctt ggcgttcttt
      421 ggcggcttca tattcggcgt tttcggacaa atcgccgtgc gaacgggctt cggcaatcgc
      481 ttcgatcact tcgggacgcg ccacgctttt gagctgctgc aattcctgtt tcagcaattc
      541 cgcaccgcgt acggtcaggg ggattttttg catcggtctt ttttctccat attccggcac
      601 accgttttgc ggcagcaagc ataccgcgta ccgtcttgtt ttgtgcgtcc ggatattaaa
      661 ataaaaatac aagccgcccg gaaaatcggc ggcttgtctg tcgttgaaca gcggctattc
      721 taccaaattc tatgaaattg gcaatcgtgc cgtgccgccg acaaacgcgc catgtccgca
      781 acaaaagctg aaaatatgcc gtcaaagaaa ttttagaaac aaaaaattta aaaataatca
      841 attttcagca taaaaaacca catttacgga ctttaaaacc gaaaatgcca agcctgagat
      901 ttttcataca gcatttgcac cagtataatg caggctgttt ttatctttat aatattgacg
      961 ttttgccatg accgaatccg tccgcctccc cgtcgcccgt ctcaaacctt ccaccgtcgc
     1021 cctgcccggc tccaaaagca tcagcaaccg caccctgctg cttgccgcct tgtccgacaa
     1081 tgcttgcgaa atccattccc tgctcaaatc cgacgatacc gaccgtatgc tcgaagcact
     1141 cgataaactc ggcgttcaaa tcgaatatct tgccgaagac cgtctgaaag tgcacggcac
     1201 aggcggacgc ttccccaacc gcactgccga tttgtttttg ggcaacgcgg gcacggcgtt
     1261 ccgcccgtta accgccgctc tggccgtttt gggcggcgat tatcatctgc acggcgtgcc
     1321 tcgtatgcac gaacgtccta tcggcgattt ggtcgatgcg ttgcggattg ccggcaccga
     1381 tgtcgaatat ctcggcaacg aacactatcc gccgcttcat atcggcgaac gccaagacaa
     1441 cggcgaacac gtgattccga ttaaaggcaa tgtgtccagc cagtttctga ccgccctttt
     1501 aatggcgttg ccgctgaccg gacaggcatt tgaaatccgt atggtcggcg agttgatttc
     1561 caagccctat atcgacatta ctttaaaact gatggcgcaa ttcggcgtac aggttatcaa
     1621 tgaaggctac cgcgtcttca aaattcccgc cgatgcgcgc taccacgcgc ccgaacactt
     1681 gcacgtcgaa ggcgatgcct ccagcgcgtc ctacttcctc gcagccggtt tgattgccgc
     1741 cacgcccgtc cgcgttaccg gtatcggcgc aaacagcata cagggcgatg tcgcctttgc
     1801 ccgcgagctg gaaaaaatcg gtgcggacgt ggtttggggc gaaaacttcg tcgaagtctc
     1861 gcgcccgaaa gaacgtgccg tccaagcctt tgatttggat gcaaaccata tccccgatgc
     1921 cgcgatgacc ctcgccatcg tcgcgcttgc cacagggcaa acctgcacgc tgcgcaacat
     1981 cggttcgtgg cgcgtcaaag aaaccgaccg catcgccgcg atggcaaacg agttgcgcaa
     2041 actcggggca aaagtcgtcg aagaagccga agcaattcac atcaccccgc ccaaaacgct
     2101 gacacccgac gccgtcatcg acacgtacga cgaccaccgc atggcgatgt gtttctcgct
     2161 ggtttcgctg ttgggcgtac ccgtcgtcat caacgatccg aaatgcaccc ataaaacctt
     2221 cccgacttat ttcgacgtgt tctcttcact gaccgaaaca acggaataag gcggcatttt
     2281 gccgcgattc cggcgcggcg cggcgggcgg ctcattctgt aaaaaaagta tgtgcgccga
     2341 ggtagttttt ggcgtaaaac ggtgtggaga gtttttcggt tttgatggtt ttgccgctgc
     2401 tgggggcatg gatgaattcg ccgttgccga tgtagagtcc gacgtgtgag tagcggtgtg
     2461 cgccgccggt gttgaagaat acgaggtcgc cggccttgag gcggctgtcg ggaattttgc
     2521 ggcttgccgc cgccatgtca cgggcggtgc gcggcagctt gacgttgagg gcgtttttgt
     2581 aaacgaattg gatcatgccg ctgcaatcga agccggttgc ggtgctgctg ccgccccatt
     2641 tgtagggcgt gccgatgagt ccgaggctgt ggagtatgag ttcctgcgag ccttgtgtgc
     2701 ggtcgatgtg gctgatgcgg acggcttgga tttgccggac tgtctgtttg ggtttcggtt
     2761 ggcggtgttt gccggaggtt gtgccgcatg aggtgaggag cagtgcgctg agacagagga
     2821 aaagggtttt gtcgggggga aacatggttt ttcctttgcg ggttcggata tgccgtctga
     2881 aggtgtttca gacggtatag tggattaaca aaaatcagga caaggcgacg aagccgcaga
     2941 cagtac
//
LOCUS       DAXHRP010000199         2928 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.199, whole genome shotgun sequence.
ACCESSION   DAXHRP010000199 DAXHRP010000000
VERSION     DAXHRP010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.199"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(227..1861)
                     /gene="groL"
                     /locus_tag="ACFM72_001987"
     CDS             complement(227..1861)
                     /gene="groL"
                     /locus_tag="ACFM72_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HFC6258495.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAMPDMGGMGGMGGMM"
     gene            complement(1954..2244)
                     /locus_tag="ACFM72_001988"
     CDS             complement(1954..2244)
                     /locus_tag="ACFM72_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HFC6258496.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
     gene            2519..>2928
                     /locus_tag="ACFM72_001989"
     CDS             2519..>2928
                     /locus_tag="ACFM72_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC6258497.1"
                     /translation="MLHFFVLEVTARSATDILGIHPNSAVLFYRKIRTVINYHLALAA
                     DEVFEGSVELDESYFGGQRKGRRGRGAVGKVVVFGILKRNGWVYTVVVDNAKSETLLP
                     VIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRIN"
BASE COUNT          609 a          748 c          772 g          799 t
ORIGIN      
        1 ttcgcgggaa tgacggcgga aaggttgctg tttttccgat aaattcctgc cgctcttcgt
       61 ttttgggatg gcgggaaata aaacaaaagc gcgcgtatca aaaaataaca atgcaaagaa
      121 cggtgttggc aattttaagg tttgcgcctt agccgcactt attcgcaaaa aaaccgcacg
      181 gcgttgaccg tgcggtttgt tgtctgaagg cttcagacgg cattacttac atcatgccgc
      241 ccataccgcc catgccgccc atgtcaggca tagcaggttt ttcttcaggg atttcggcaa
      301 tcatgcagtc tgtggtcagc atcaggccgg cgatagacgc ggcgtgttgc agcgcggagc
      361 gggttacttt ggcggggtcg agtacgccca tttcgatcat gtcgccgtat tcgccgctgc
      421 ctgcgttgta accgtagttg cctttgcctt ccaacacttt gttcaccacc acgctaggtt
      481 cgccgcctgc gttggcaacg atttggcgca gcggagactc aacggcgcgc aagacgattt
      541 gtacgcctgc gtcttggtcg gcattgccgg tgtgcaggtt ttccagagcg gcacgggcgc
      601 gcaacagggc tacgccgccg cctgcaacca cgccttcttc aacggctgcg cgggtagcgt
      661 gcagcgcgtc ttccacgcgg tcttttttct ctttcatttc gacttcggta gcggcaccga
      721 ccttgattac tgccacgccg cctgccagtt tggccacgcg ctcttgcagt ttttctttgt
      781 cgtaatcgct ggttgcggtt tcgatttgtt ggcggatttc ggcaacacgc gcttcgattt
      841 gggctgcgtc gccgaagccg tcgatgatgg tggtgttttc tttaccgatt tcgatgcgtt
      901 tggcctgacc caagtcgtcc aaagtcgctt tttccaaaga caggccgact tcttcggaaa
      961 tcactgtgcc gccggtcagg atagcgatgt cttgcagcat cgctttgcgg cggtcgccga
     1021 agcccggagc tttaacggca acggttttca gaatgccgcg gatgttgttc acgaccaaag
     1081 tcgccaaggc ttcgccttct acgtcttcag cgataatcaa cagcggacgg ctggctttgg
     1141 ccacttgttc caaaacaggc agcaggtcgc ggatattgct gatttttttg tcgaacagca
     1201 atacaaacgg attgtccaag ccggcgattt gtttttccgc atcgttgatg aagtaaggag
     1261 acaggtagcc gcggtcgaat tgcatacctt caaccacgtc cagctcgttt tccaaagatt
     1321 tgccgtcttc aacggtaatc acgccttctt tgccgacttt ttccatcgct tcggcaataa
     1381 tcgcgccgac ttgttcgtca gagttggcgg aaatagagcc gacttgggcg atttctttag
     1441 aagtgtcgca aggtttggcg atgtttttca gctcttcaac caaagcggcg acggctttgt
     1501 cgataccgcg tttcaggtcg gtcgggttca taccggcggt aacgtatttc ataccttcgg
     1561 caacgatgga ttgcgccagt acggtggcgg tagtcgtacc gtcgcccgcc acgtcgttgg
     1621 ttttggacgc gacttctttt accatttgcg cgcccatatt ttcaaacttg tctttcagtt
     1681 cgatttcttt agcgacggtt acgccgtctt tggtgatgtg cgggccgccg aaagcgcggt
     1741 caaccactac gttgcggcct ttgggaccca gggttacgcg cacggcgttt gccaaaatgt
     1801 tcacgccgtt taccattttt tggcggactt cattgccgaa ctgtacgtct tttgctgcca
     1861 tttcaattct ccaaaaatca ttaaaactgt ctgataaaac cgtttatgcc gtctgaaggc
     1921 ggtttgccgt ttcagacggc atcgtgtcca tatttatttt tcaacgatgc cgaagatgtc
     1981 ttcttcgcgc atcaccaaca gctcttcgcc gtcggctttg acggtttggc cgctgtattt
     2041 gccgaagatg attttgtcgc cgactttgac atccagcgga cggcgcgcgc cgtctttacc
     2101 gattttgccc gcgcccacgg cgatgacttc gcccatatcg ggtttttcgg cggccgcacc
     2161 cggcaaaacg atgcccgatg cggttttttc ttcagcttcc aagcgtttga cgacaacgcg
     2221 gtcgtgtaaa ggacggatgg tcatatttat gctccgataa aatgatttga aaacaatcat
     2281 ctgcccgaac ggttcggaca gattgaagtg gaaaccgggc tgccgcctgc cggcccgccc
     2341 gtataagtcg gcaaaattag ggtgtgtgcg ggtaaattca agtgaggcgg aaaaaaattt
     2401 atttccgccg ttttttatag tggactaaat ttaaggggct gtactagatt agcagatatg
     2461 ttaccctcga aatatgaaga taacgcactg aaaattaaag aaaaaagtac agaaagaact
     2521 gctccatttt tttgtactgg aagttaccgc ccgttctgcc accgatattt tgggtatcca
     2581 tcccaattcg gcagtactgt tctaccgtaa aatccgcacg gttatcaact atcatttggc
     2641 cttggctgcc gatgaggttt ttgagggttc tgtcgagctg gacgaaagct atttcggcgg
     2701 acagcgtaaa ggcagacgtg gtcgcggtgc ggtaggaaaa gtggttgttt tcggcattct
     2761 gaaacgcaac ggatgggtct ataccgttgt ggtggataat gccaagtctg aaacgttact
     2821 ccctgtcatc aaaaagaaaa tcatgccgga cagtattgtt tataccgata gtctgagcag
     2881 ctgcgacaag ttggacgtga gcggttttat ccattaccgc atcaacca
//
LOCUS       DAXHRP010000200         2810 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.200, whole genome shotgun sequence.
ACCESSION   DAXHRP010000200 DAXHRP010000000
VERSION     DAXHRP010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.200"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..1054)
                     /locus_tag="ACFM72_001990"
     CDS             complement(<1..1054)
                     /locus_tag="ACFM72_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HFC6258498.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDNKGAVLNNDRNNNPFLVKGSAQLILNEVRGTASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGTPQIGKDGALTGFDVRQGTLTVGT
                     SGWNDKGGADYTEVLARAVALQGKLQGKNLAVSTGAQKVDYASGEISAGTAAGTKPTV
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGA"
     gene            complement(1164..>2810)
                     /gene="hrpB"
                     /locus_tag="ACFM72_001991"
     CDS             complement(1164..>2810)
                     /gene="hrpB"
                     /locus_tag="ACFM72_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HFC6258499.1"
                     /translation="SMQRQQHIDAELLTDANVRFEQPLEKNNYVLSEDETPCTRVNYI
                     SLDDKTARKFSFLPSVLMKETAFKTGMCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQ
                     PQNMDSGILKLRVSAGEIGDIRYEEKRDGKSAEGSISAFNNKFPLYRNKILNLRDVEQ
                     GLENLRRLSSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGN
                     VALSFDNPLGLSDLFYVSYGRGLVHKTDLTDATGTETESGSRSYSVHYSVPVKKWLFS
                     FNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWRNRLHKTSVGMKLWTRQTYKY
                     IDDAEIEVQRRRSAGWEAELRHRAYLNRWQLDGKLSYKRGTGMRQSMPAPEENGGDIL
                     PGTSRMKIITAGLDAAAPFILGKQQFFYATAIQAQWNKTPLVAQDKLSIGSRYTVRGF
                     DGEQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSGKQLMGAVVGFR
                     GGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSF"
BASE COUNT          659 a          680 c          673 g          798 t
ORIGIN      
        1 ccgctccttt ttcggtggtt tcgatggaga gataagtcgg tgaagcttcg gtgccgtcgg
       61 cagtggtggc gatgcggccg ctgttttcaa tgcggcctga cgaagtcaca atcaattgct
      121 tggccgcttc gagtgtgccg gcatttttga cgcctacgcc tttttcattg gcaatcaggg
      181 taatgctgtc tgcgtacata ccacccaatg cggcagtatc gagggcaacg gtcggtttcg
      241 tacctgctgc cgttcctgcg ctgatttcac cgctggcgta atctactttc tgtgcgccgg
      301 tcgaaaccgc caggttttta ccctgcaatt tcccctgcaa agcaaccgca cgggcaagca
      361 cttcggtgta atcggctccg cctttgtcgt tccaacctga cgtaccgacg gtcaatgtgc
      421 cttggcgcac gtcaaatccc gtcaaggcac cgtctttgcc gatttgaggc gtaccggtgg
      481 ttaagatacc gcggccgacg tttttaaagc cgccgccatt aacggtaatg ccgttggggt
      541 tggcaataat cacgtcggcc ttttgaccgc ctacggtaac gatgccgttg agtttgctag
      601 ccgtaccgcg tacctcgttc aaaatcaatt gcgcactgcc tttgaccaga aacggattat
      661 tgttacggtc gttgtttaac actgcccctt tgttgtcaac atcaaactgc gtatagcggt
      721 tgtggctcaa tccgcgtcca ttcggagttt ggatattcac caagggggca ccagtgttgg
      781 ttttaaggat aacgacctgc tggtttttag gtgctgattt gtcggtggta atttgggcat
      841 gggcaggcaa taccatactc agggaaacca aagagcagac caaggtttta agggtggttt
      901 tgagtttgcc gcaaaggtcg cctgaagttt tcagtgaaac agaaaccgaa ctgcctgcct
      961 gtttaccttt gccctggctg ttggcagttt cggctactgc aaccatggtg ctgtgctttt
     1021 tactaaagat aatgcgatgt aaacctttat tcatgtctat tccattttga agatgaacgt
     1081 actgcgcgcc aagtacgtag gtaaagtttg acggtctgag gataaggaaa gaccgtctaa
     1141 atatcagtaa aaaaattcag aggttagaaa ctgtaattca agttgaagcc gtaaacggtg
     1201 ttggtcgtct gaaagccttt gggtttatga agcggcttgc cggcaaacag atcataagca
     1261 aacataccgc ctactttatg ccctcctctg aagccgacca ctgcacccat cagctgcttg
     1321 cccgatacat attgtgcact ttcgccagat acgcggccat agtccgcacc gagatagaac
     1381 tgatggttcg gatgaaaata ccaagttaaa gtattctgcc agtagaaacc tcgctctccg
     1441 aaaagactct gctccccatc aaatccgcga acggtgtagc ggctgccgat tgacaattta
     1501 tcttgggcaa ccaacggcgt tttgttccat tgagcttgaa tggcggttgc gtagaaaaac
     1561 tgctgtttgc ctaaaataaa tggggcggct gcgtccaaac cggcagtaat gattttcata
     1621 cgagatgtac ctggaagaat atcgccgccg ttttcttccg gtgcaggcat actttggcgc
     1681 atgccggtcc cgcgtttgta agacaacttg ccgtcaagct gccaacggtt gaggtaagca
     1741 cggtggcgca attcggcttc ccagcctgca gagcggcggc gttgcacttc gatttcggca
     1801 tcgtcgatgt atttataggt ttggcgtgtc cataatttca ttccgactga agttttatga
     1861 agtctgttac gccaaagcat gcgctcggcg gccaggctgc tctgatattg tttgccgttg
     1921 taatcgtaat tgacggaata gccttcggtt gcttcgtggt aacgatgtcc attgtgatta
     1981 aaagaaaaca gccatttttt tacgggcacc gaataatgca cgctgtaact tctggatccg
     2041 ctttcagttt ccgtaccggt ggcatcagtc aagtccgttt tgtgcaccaa accgcgtcca
     2101 tatgaaacat aaaacaaatc gcttaagccc aaagggttat cgaacgataa agcgacattt
     2161 ccttgatatt tgccggtcgt tttgccgccc gcatcatcta taccgatact gaaccgtatg
     2221 ggtttattct gctgccattt gatctgtaaa tcgcttttgc cttcttcttc ggacggtata
     2281 atctgaatat ctgttttaac actcgacaaa cgacgcaggt tttccaagcc ctgctctaca
     2341 tcgcgaagat tgagaatttt gttcctatat aagggaaatt tgttattgaa tgcactaata
     2401 ctgccttcgg cagacttccc atcccgtttt tcttcatagc ggatatcccc tatttcgcct
     2461 gctgataccc gtaatttcag aattcccgaa tccatattct gtggttggat aatagcttgg
     2521 gaagtgaggt agccacgcac aatcagtatc tgttgcgcgg ctttttgtag cctgctcaaa
     2581 ttattggaac ctaaacacat cccagtttta aaagctgttt ctttcatgag cacagaagga
     2641 agaaaagaaa atttgcgcgc cgtcttatca tctaaactaa tgtaatttac ccgagtacac
     2701 ggtgtttcat cttcactcag gacataattg ttcttctcca atggttgctc gaaacggaca
     2761 tttgcatcag ttaacaattc agcatctatg tgctgctgac gctgcatgga
//
LOCUS       DAXHRP010000201         2799 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.201, whole genome shotgun sequence.
ACCESSION   DAXHRP010000201 DAXHRP010000000
VERSION     DAXHRP010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.201"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..764
                     /locus_tag="ACFM72_001992"
     CDS             <1..764
                     /locus_tag="ACFM72_001992"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HFC6258500.1"
                     /translation="IRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYL
                     DIDVLVRDSLTPLWDTDLGDNWLGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLIN
                     LKKWRRHDIFKMSCEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMA
                     NRFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPE
                     EWRGKLAVPHRMFSTKRMLQRWRRKLSARFLRKIY"
     gene            819..1827
                     /locus_tag="ACFM72_001993"
                     /pseudo
     CDS             819..1827
                     /locus_tag="ACFM72_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223083.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            1846..2688
                     /locus_tag="ACFM72_001994"
     CDS             1846..2688
                     /locus_tag="ACFM72_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC6258501.1"
                     /translation="MQNHVISLASAAERRAHIADTFGAHDIPFQFFDALMPSEALEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
BASE COUNT          723 a          635 c          753 g          688 t
ORIGIN      
        1 atatccgctt tatagacgta aaccccgaag atttcgccgg cttcccctta aacatcaggc
       61 acatttccat tacgacttat gcccgcctga aattgggcga atacattgcc gattgcgata
      121 aagtcctgta tctggatata gacgtattgg tcagggacag cctgacgccc ttatgggata
      181 ccgatttggg cgataactgg cttggcgcgt gcattgattt gtttgtcgaa aggcaggaag
      241 gctacaaaca aaaaatcggt atggcggacg gcgaatatta tttcaatgcc ggcgtattgc
      301 tgatcaacct gaaaaagtgg cggcggcacg atattttcaa aatgtcctgc gaatgggtgg
      361 aacaatacaa ggacgtgatg caatatcagg atcaggacat tttgaacggg ctgtttaaag
      421 gcggggtgtg ttatgcgaac agccgtttca actttatgcc gaccaattat gcctttatgg
      481 cgaacaggtt tgcgtcccgc cataccgacc cgctttaccg cgaccgtacc aatacggtga
      541 tgcccgtcgc cgtcagccat tattgcggcc cggcaaagcc gtggcacagg gactgcaccg
      601 cgtggggtgc ggaacgtttc acagagttgg cgggcagcct gacgaccgtt cccgaagaat
      661 ggcgcggcaa acttgccgtc ccgcaccgta tgttttcgac aaagcgtatg cttcaaagat
      721 ggcgcagaaa gctgtctgcc agattcttac gcaagattta ttgacggggc aggccgtctg
      781 aagccttcag acggcatcgt gcctatcggg agaataaatt gcagccttta gtcagcgtat
      841 tgatttgcgc ctacaacgta gaaaaatatt tcgcccaatc attagccgcc gtcgtgaatc
      901 aaacttggtg caacttggat attttgattg tcgatgacgg ctcgacggac ggcacgccct
      961 ccattgcccg gcgtttccaa gaacaggacg gcaggattag gataatttcc aatccccgca
     1021 atttgggctt tatcgcctct ttaaacatcg ggctggacga attggtaaag tcggggggga
     1081 tatattgcgc gcaccgatgc cgacgatatt gccgcccccg gctggattga aaaaatcgtg
     1141 ggcgagatgg aaaaagacgc ggatattgcc gcgatgggtt cctatttgga gattttggcg
     1201 gaagaaaaca ataaaagcgt gcttgccgcc attgcccgaa acggcgaaat ttggaaaaac
     1261 cccctgaccc atcaggaaat cacgtctgcc ttccccctcc gcaaccccat acacaacaac
     1321 acgatgatta tgcggcgcag cgtcattgac ggcggtttgc ggttcgatcc cgcctatatc
     1381 cacgccgaag actataagtt ttggtacgaa gccggcaaat tgggcaggct ggcgaattac
     1441 cccgaagcct tggtcaaata ccgtttccat caagaccaga cttcttccaa acacaacctg
     1501 caacagcgta agacggcgtg gaaaatcaaa gaagaaatca gggcggggta ttggaaggcg
     1561 gcaggcataa ccgtcgggtc ggactgcctg aattacgggc ttttgaaatc aacggcatat
     1621 gcgttgcacg aaaaagcctt gtccggacag gatatcggat acctccgcct gttcctgtac
     1681 gaatatttct tgtcgttgga aaagtattct ttgaccgatt tactggattt tctgacagac
     1741 cgcgtgatga ggaagctgtt tgccgcaccg caatatagga aaatcctgaa aaaaatgtta
     1801 cgcccttgga aataccgggg ctattgaaac cgaacaggga aaatcatgca aaaccacgtt
     1861 atcagcttag cttccgccgc agaacgcagg gcgcacattg ccgatacctt cggcgcgcac
     1921 gacattccgt ttcagttttt cgacgcactg atgccgtctg aagcactgga gcaggcaatg
     1981 gcggaactcg tacccggttt gtcggcgcac ccctatttga gcggagtgga aaaagcctgc
     2041 tttatgagcc acgccgtatt gtggaaacag gcattggatg aaggtctgcc ctatgttgcc
     2101 gtatttgagg atgatgtcct gcttggcaaa gacgcagaaa agttccttgc cgaagatact
     2161 tggttggaag agcgttttga taaggattct gcctttatcg ttcgtttgga aacgatgttt
     2221 gcgaaagtta ttgtcagacc ggataaagtc ctgaattatg agaaccggtc atttcctttg
     2281 ctggagagcg aacattgggg gacggctggc tatatcattt cgcgtgaggc gatgcggttt
     2341 ttcttggaaa ggtttgccgt tttgccggca gagtggatta aagcggtaga ttggatgatg
     2401 tttacttatt tctttgataa ggaggggatg cctgtttatc aggttaatcc cgccttatgt
     2461 acccaagaat tgcattatgc caagttcctc agtaaaaaca gtatgttggg tagcgatttg
     2521 gaaaaagata gggaacaaga aagaagacac cgccgttcgt tgaaggtgat gtttgacttg
     2581 aagcgtgctt tgggtaaatt cggtagggaa aagaagaaaa gaatggagcg tcaaaggcag
     2641 gcggagcttg agaaagctta cggcaggcgg gtcatatcgt tcaaatagtt tgtgtaaaat
     2701 atagcggatt aaaattagaa atggatacac tgtcattccc gcgcaggcgg gaatctagtc
     2761 cgttcggttt cgcttgtttt aagtttcggg taacttcca
//
LOCUS       DAXHRP010000202         2788 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.202, whole genome shotgun sequence.
ACCESSION   DAXHRP010000202 DAXHRP010000000
VERSION     DAXHRP010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.202"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..806)
                     /locus_tag="ACFM72_001995"
     CDS             complement(<1..806)
                     /locus_tag="ACFM72_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HFC6258502.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSG"
     gene            complement(820..990)
                     /locus_tag="ACFM72_001996"
     CDS             complement(820..990)
                     /locus_tag="ACFM72_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258503.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     ILIIGIFLSIFF"
     gene            complement(2031..2267)
                     /locus_tag="ACFM72_001997"
     CDS             complement(2031..2267)
                     /locus_tag="ACFM72_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HFC6258504.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT          893 a          488 c          471 g          936 t
ORIGIN      
        1 cctgatttac tagctcgtat ggtttgttcg gatttcaaat caaaatccaa aatttcttgg
       61 ttcatttccg taatcgcacg gttgagttgg ctcaattcgg ttttatggcg ttcaggcagg
      121 ctgcttaatg tgattttctg ttcatcaagt tccctgattg cattattttg ttcacgtttt
      181 aggctctcca aacgtgagcg ttgttccaat aaatggcttt cggcggtcat cttatcttgt
      241 tgggatactg cgccttgact ggctaaaaac ttgttcttgt taagggtttt ttccgctaaa
      301 cgaatttgac gattttgccc tgtaatttgc tgtttaatat tctctaattg attgtttaaa
      361 cgatgaatgt tgttatgaac atttttttgc tcattttgat gaatgcgctt taaacgttcc
      421 aattcttgta atgccaaagt ttttttaagg ttggcttctg ctgccaattt ggcttgtacg
      481 tttccttttt cgccaaaacg cgatgtggaa agtttgaaca atggttcgcc agctttgaca
      541 aagttaccat cttcaacaaa tttatgcgta atcgtgccga tatcggaaga gtaaacacga
      601 accaccccca tagttggaag taattgacct tcaacggttg ttttattggt atagctacca
      661 aaaatcaaaa agataatgat acacagagca atgagaaaag cgcaaaaagt cagaaataaa
      721 aaagagaatg gacgggtcaa gataacctga cctgtccact tattttgttg ggctacaaag
      781 acttcttttc ggaataagtg ggacatttat tattatttct taaaaaaaaa tggatagaaa
      841 aataccaata attaaaatac ttatgcctaa taacataaat ttgctattga ttgatgtttc
      901 tattttaatt acattaaatt taaccaataa tccagaaatg gttgcagcta aaatgcaaaa
      961 gacagtggcg taaatggttt cagtattcat aatttttctc tttcaaaatt gttcaatcta
     1021 aatagaaaaa ggtaacttca atacatattg ctgtaactga aattaccttt tccttaatga
     1081 tgtaattatc ttatggcttc atcatgccac gaccgatatt gtatccgcca gcaacagaga
     1141 aaataccagc tcccattgcg tcaacccagc ctactggtcc tgtccacttg ttccgttgag
     1201 ctacaaagac ttctggtctg aaaaatgagt gattgttaga catgtgtact tatttatgtt
     1261 tctttgattg ggataaattt gtaaaaacaa aaaaaaggca agttgttatt atagaagaac
     1321 ttaaaatgct taacatactc attgaggttt gtaccacata atgagatacg agataatttg
     1381 ttgggagtaa aatcaaaaaa aagattaaat atttaaaata atcactatat tttttcatta
     1441 tttgttcctt tttgtattta agttcttatg aaaaactagg gtattttgaa tagaaaatat
     1501 caaaataccc tagttttatt aaggaatatt accaccaaca agtgcttcca tattgtacag
     1561 caccagtgat tgcaccacca atagctccga atttcgcacc tggaatagca ccaataccac
     1621 ctgcaaatga accaacaatt gccccaccag ctgctccacc taatgcacta ccaatggtat
     1681 tttttgagaa atcacgccag ttacaagcag caccagaaac ttgttaaatt tcattcaaag
     1741 tcaaaacttg cataatattc acctttgtta agtgtggttg agaaaaaagt aaattttcat
     1801 cgttactcat tatttgcaat catgcatata ctgtaaccaa gcactatatt cagttggatc
     1861 atagtttttc ctactgggtt gtctgatatg actattggca ctattggcac aattgggatt
     1921 agcaacttta ttgtgagtac ctaatggatt gatatttcct gtaaagtggc tattgcatgc
     1981 gcttaatgag catagattta ttaatgtcag aaaggataaa acaaaaaatc ttaccatttt
     2041 ttactaatac caaaagtagg tttcgaaaac tgtacaccaa gaccttgtac atatccaaat
     2101 tgcttgctaa cagaaaactc tactccacta ttgttagggg aataggaagc accaatttta
     2161 ccaacagcaa ccatatcttt tttacctagg ttgccgccac cctgtgcaaa gatatggaat
     2221 ttgccacctg acacttcaac taattcagag gtgtgtaact ctttcatgat tttctcctgt
     2281 aaagaagtat ggttggaaat gtaaatcaga attaaccttt cttaagttta atttaatact
     2341 ttttttgcaa gtattttatt ttaaattaaa tcaatatttt aaaaatattt acttgtatac
     2401 tgaaaaagaa actcctaatg gtggagtggg gcttttgttt aagtaagcat taaaaaaatt
     2461 taaatttccc attatgatta acttaatgca agagcttttt caggacgtac aaaccagcga
     2521 acgggcgttc tgatgtgggc agcctgccgg gaagtctgct ctattgttcg gacaataggg
     2581 ggaatatacc aattacttta actacatcat tttttgacat ttttcttgcc tttcaattta
     2641 aaatccaaaa tcatactgcc ataatttagc aatccaaaaa aatttaggca gcagtaatgg
     2701 tttcgtattt tagaaaacga aacttggttt ggtgttttga agcatttcag tacacaaacg
     2761 gggctgtcct agataactaa gataaact
//
LOCUS       DAXHRP010000203         2694 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.203, whole genome shotgun sequence.
ACCESSION   DAXHRP010000203 DAXHRP010000000
VERSION     DAXHRP010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.203"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..675)
                     /gene="mafB"
                     /locus_tag="ACFM72_001998"
     CDS             complement(<1..675)
                     /gene="mafB"
                     /locus_tag="ACFM72_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC6258505.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKNRVYAVQTFDATAVGPILPITHERTGFEGIIGYETHFSGHGHE
                     VHSPFDNHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKSNIVPRAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WANRMDD"
     gene            complement(715..1677)
                     /gene="mafA"
                     /locus_tag="ACFM72_001999"
     CDS             complement(715..1677)
                     /gene="mafA"
                     /locus_tag="ACFM72_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC6258506.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIQPYGNHMGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(1861..2580)
                     /gene="pyrH"
                     /locus_tag="ACFM72_002000"
     CDS             complement(1861..2580)
                     /gene="pyrH"
                     /locus_tag="ACFM72_002000"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HFC6258507.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVITGEDEGTLVHC"
BASE COUNT          629 a          614 c          671 g          780 t
ORIGIN      
        1 atcatccata cggttagccc accaattttt attggggtcg ctttcccata tcagttttcc
       61 tgcttcatca gcacggctga aaaaaccaga ggcggcaccg gcattttctt ttagccagcg
      121 gtctgaaaat ggggctcggg gaacaatatt actctttgtt tttgttgaag ttcctttgac
      181 atagtagctg tatatatccc ttgctcctcc ggggggcgga taatcgctgc cttgcggccc
      241 gtcatatcca tcctccggat ggatttccga ccctgtccga tgaagttggt aaacggtaaa
      301 accaccgtct acgccgccgc tgaaatcaga agtgcttttt gaatcatgat tatcgaacgg
      361 actgtgtact tcatgtccat gtcctgaaaa atgggtttca taaccgataa tgccttcaaa
      421 tcctgtccgt tcgtgtgtaa taggcagtat ggggccgacc gcagttgcat caaatgtttg
      481 gacggcgtaa acccgatttt taacactgcc gcgagcatta ccaaacagat ggtatttacc
      541 acccggttcg tagtgttttg cctgcatatc atcgcgtaaa cgggcatcca aaccgttcgc
      601 atgactaatg gggatttgca gcaacgatat tgctgctgca aacagcatca tgaatttttg
      661 aataggcaaa ttcattttgt tttccttggt agcaagcggt tatggtagtg tgaatcaagg
      721 ttgcccttgt ctatgttgtc gcactacttc atcgctgtat ccatacccct catgactgtt
      781 atcagtctct acggatgggg cggagttacc catatgattg ccgtatggtt ggatatcgga
      841 gaaatcgacc attaatcctt ctgtcggttt aattcctttg cttactttat acggtcccat
      901 ccacaatgcg taattttctt tataggcagc ttcaaacgca ttggtttttg gtttgatgag
      961 caatttttta ttggttctgt ctactgcgaa atattccagt tttgtttggg ctttcagtgt
     1021 ttcggcattg tataggtgca tttcggttct gttgcgtatc gttccgaata cgtcgatgtt
     1081 aataaacaca tccgtatcgg cattggcagg agaaacaacg tctatgccgc gcaggaaaaa
     1141 tacggtctgt accaagtggg aaagaaaggc agtgtcgcgc gggttagtcg tcaaggtttc
     1201 atttcgataa tcccccatcc cgccaatatt taagcccaga ctgcttttac ttccgctacc
     1261 gtctgattgg gtgcgcgaga gtgcaggggc attaagtgta gataaagaag tggttaaacc
     1321 tgtcaaaccg cctgatgttg tttcagcggt ggtttcgtaa cgtggatagg tgtaatcggt
     1381 acggacggca gggctgttta tgtattcgcc acgaatcagt gcatcaatgg agtagcgacc
     1441 ccctgtcaaa ctgcctgaac cttggtcgcc catagttgca atgtacaatg caacttttcg
     1501 tccgtgtaat gcctgtaaat ccatgtcttt aacggcagct ctggcagaag cggccacaag
     1561 ttcttgttcg accgcaaagc gtttacctcc gccatgcgat ggaatacctg tcagtgtccc
     1621 gcaggcggat aaaataaaaa ctgaaaaaag aataggtatc agcagccgtg cttgcataga
     1681 ttttctcctt tgatgaaaaa caaattgtat caaaattgta aatatagtgg attaaattta
     1741 aaccagtacg gcaaggcgag gcaacgccgt actggtttaa atttaatcca ctataatctc
     1801 catataataa atggctgtct gaagcccata tgcgactata tctgccgaca ctatggtcaa
     1861 tcagcagtga accagcgttc cctcgtcttc gccggtaatg acgcgtttga gcgagccttc
     1921 tttggcgatg ccgaagacga cgatattgag cttgcgttcg cggcagaggg cgaaagcggt
     1981 cgcgtccatg actttgaggt ttttcaacaa ggcttcgtca aaagtaatgg tttcgtagcg
     2041 tgtggcggac gggtcttttt tcgggtctgc ggtgtataca ccgtcgacgt tggtggcttt
     2101 gagcatcacg tcgcagttca tttccgcacc gcgcaatgcg gcggcagtgt cggtcgtgaa
     2161 gaacgggtta ccggtaccgg cggcaaaaat cacgactttg ccttcttcca aatattggat
     2221 ggctttagga cgggcgtaag tttcagcgat ttgctgcata gacagtgcgg attgtacgcg
     2281 cgctttgatg cctaaagttt caaatgcgtc tttgagtgcc aaggcgttca tcacggtcgc
     2341 catcataccc atgtaatcgg cagtggcgcg gtccatgctg cctgcttggg cggatacgcc
     2401 ccggaaaata ttgccgccgc ccacgacgat gccgacctgt acgcccattt taacgacttc
     2461 ggcaatttcg ccgacggttt ggacgatggt gtcgtgattg atgccgaacg gatcggaacc
     2521 catcagggat tcgccggaga gtttcagtaa tacgcgtttg tatttgattt gctgtgtcat
     2581 gggatacctt gctttcttga atgtcgtcgg tcggagttgg gccgtctgaa tttccaacgg
     2641 tcggaattac aatgatatgg cgtgtcgttc tgttatagtg gattaaattt aaat
//
LOCUS       DAXHRP010000204         2634 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.204, whole genome shotgun sequence.
ACCESSION   DAXHRP010000204 DAXHRP010000000
VERSION     DAXHRP010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.204"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(333..566)
                     /locus_tag="ACFM72_002001"
     CDS             complement(333..566)
                     /locus_tag="ACFM72_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC6258508.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLDVLDVDDDPVLE
                     EKYNELVPVLLAGDKEICHWYLDEKKLRQVLES"
     gene            complement(732..932)
                     /locus_tag="ACFM72_002002"
     CDS             complement(732..932)
                     /locus_tag="ACFM72_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HFC6258509.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAVINVQA"
     gene            complement(1104..1979)
                     /gene="xerD"
                     /locus_tag="ACFM72_002003"
     CDS             complement(1104..1979)
                     /gene="xerD"
                     /locus_tag="ACFM72_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HFC6258510.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLATPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2031..2471)
                     /locus_tag="ACFM72_002004"
     CDS             complement(2031..2471)
                     /locus_tag="ACFM72_002004"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HFC6258511.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
BASE COUNT          716 a          744 c          521 g          653 t
ORIGIN      
        1 tctaccgatt acacaaacac atatcatctt tacacaaaca catatcatct ttacacaatc
       61 atgcttccat caacagtaaa acatgatatg attgccaaca ataacatctc gcaataaatt
      121 ttctaatttt tattgaaaaa atcaataaat aagaattctc ccaaccgaca aataaaataa
      181 agaaagggtt aatatgcaac atcgaagaag actagcaatt taccaagcat ccaaacgtgc
      241 ttcctttacc ggcaggtcat ccgccccgca aaaacgtaaa gaacgttgat ttgaaaaaaa
      301 tgccgtctga agtcctgctt cagacggcat ttttacgatt cgagaacctg cctcaacttt
      361 ttttcatcca aataccaatg gcaaatctct ttatcacctg ccaacaaaac aggtaccagc
      421 tcattatatt tctcttccaa gacgggatca tcatccacat caagcacatc cagcccgaaa
      481 ccgtattcat tttgaaaagg tttgagtgca tcgcgcattt tgtggcacaa gctgcaatat
      541 tcacgaaaca tcaaggtcaa tttcatccgc gtttccttat ctgtcaattt gcacacgcca
      601 aagccttaga cgcagcagaa tcatggtcta tttgggaaaa aacaatgttt tcgaggaaga
      661 tgatactcaa gttctgccaa aaacagcaaa aatgccgtct gaacagttca gacggcattt
      721 ccaaaaccgt tttacgcttg aacgttgata accgccgtaa ccgtcggttg cgcattgtgc
      781 gccgtcagaa acgaagcggc aagctccccg cagcagccgc agcagctcgc tacgcccaat
      841 tgcgactgca aatcgcccat tgtggtcgcg ccggcggcga tggtttcctt gatttgatgg
      901 tcggtaacgg cattgcagat gcagacaaac attttgtgct ccgtgtgttc tcaaactatc
      961 gtaccgatag cggcttttat tatcgtatgc aaatataaat aaaaacagtt cgcattgcaa
     1021 ggtcggcata cacggtttat cttggtaatt ttttatcaag tttgtatttt cgattgattt
     1081 cttattaaac cgaagcagaa gcctcagttt cgggaatggt gttccttcac tacaccctgc
     1141 aaccatacgt tggcaacatg ggtataaatc tgcgtcgtat tcaaatcggc atgtcccaac
     1201 atatcctgaa ccacgcgcaa atccaagccg tgccgcacca gatgcgtggc aaaggcgtgg
     1261 cgcaggctgt gcgggctgat gtgcccgatg cctgcctgac ttgcatattc tttgacaatc
     1321 atccatgcca actgacggga aatgcccgtc tttttctgac tgacaaacaa tgcgtcgcaa
     1381 ttcctgcctt tcagcagaag tgggcgtgcc tccgtataat agcgttccac ccaatacgcc
     1441 gactcctgcc ccatcgggac catcctctgc ttatcgccct tgcccagcgc ggtaatacag
     1501 cccctgtcca aatccacatt gccgaagttc agcccgaccg cctcgctgac gcgcaagccg
     1561 gtcgcgtaca tcaattcgag caaagccttg tcccgcaaac cgtgtggcgt atcagtatcc
     1621 ggagtggcaa gcagccggga aatctgctgt tctgtaatca gtgtcggaat attcttgtcg
     1681 attttgggcg gtttcagcaa acgggtggga ttgtccgtcc ttatgccttc acgctccatc
     1741 catatataca ggcgtttgca cgccgataat gcgcgcgcct gcgaactccg ttgctctccg
     1801 tcaacataaa ccgccgccgc caaatccgct tcgtccgcat ccttcagcat tctgcccgat
     1861 tgggacaggc ggcgggcgat tttttccaaa tcgcgccggt aaccgtttaa agtattctga
     1921 ctgagccgcc tgtccaacca cagcgtttca agcagcctgt cgatcaaacc ttcttccata
     1981 ccgttccaaa caaatgccgt ctgaatcttc ttcagacggc atggttcaca ttatcgggaa
     2041 agcgtttcca atacttcctg cgcgtgaccc gccactttga ctttccgcca ttcatgggcg
     2101 atttctccat ccttattcaa gacgaacgta ctgcgctcga tacctaacga ctctttcccg
     2161 tacagtttct tcaatttgat gacatcaaac aggcggcaca ctgtttcatc cttgtcgctc
     2221 aacagctcga accggaaacc ctgcttggcg caaaaattct gatgcgcctt tacgccgtcg
     2281 cgggaaatac cgaccacggt ataacccaat gcctcaaact gttccaaacg cgcattgaaa
     2341 tccaagcctt ccgtcgtaca gccaggcgta ctgtctttcg gataaaaata cacgaccaaa
     2401 ggcagatgtt ctgccgaatg aaaatccgca ccgctgctcg aaggcagggt aaattcatat
     2461 ttcacatcca tagtcctact cccgatattc ccattattca aaacggcacg cagacgcacc
     2521 gccgcaattg ccaaaccaac cccgattcta ccgccccaaa ggacaaggat tcaaccgccg
     2581 gaaacatcca aaccgacaca cgacggcatg aaaaatatcc atgtcaaacc acaa
//
LOCUS       DAXHRP010000205         2610 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.205, whole genome shotgun sequence.
ACCESSION   DAXHRP010000205 DAXHRP010000000
VERSION     DAXHRP010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.205"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>2610
                     /locus_tag="ACFM72_002005"
     CDS             <1..>2610
                     /locus_tag="ACFM72_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HFC6258512.1"
                     /translation="GRIESKGLLVIETGEDISLRNGAVVQNNGSRPATTVLNAGHNLV
                     IESKTNVNNAKGPATLSADGRTVIKEASIQTGTTVYSSSKGNAELGNNTRITGADVTV
                     LSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGGKQLALLADDNI
                     TAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGTSKTLTASKDMG
                     VEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTALQGNIVSDGLHA
                     VSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNITSSSGDITLVAG
                     NGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSDRALSIENTKLE
                     STHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLVANGVLALNARY
                     SQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPLAGRLNIEAGSG
                     TLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKGNIRLVTGETDL
                     RGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKELEQQIAQLKKS
                     SPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQNIDLISAQGIEI
                     SGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYKSHYDKAALNKP
                     SRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLEAGQNDAYTFLK
                     TKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTTRFNAPAGKVTL
                     VAGEELQLLAEEG"
BASE COUNT          811 a          673 c          587 g          539 t
ORIGIN      
        1 tggtcggatc gagagcaaag gcttattggt tattgagacg ggagaagata tcagcttgcg
       61 taacggagcc gtggtgcaga ataacggcag tcgcccagct accacggtat taaatgctgg
      121 tcataatttg gtgattgaga gcaaaactaa tgtgaacaat gccaaaggcc cggctactct
      181 gtcggccgac ggccgtaccg tcatcaagga ggccagtatt cagactggca ctaccgtata
      241 cagttccagc aaaggcaacg ccgaattagg caataacaca cgcattaccg gggcagatgt
      301 taccgtatta tccaacggca ccatcagcag ttccgccgta atagatgcca aagacaccgc
      361 acacatcgaa gcaggcaaac cgctttcttt ggaagcttca acagttacct ccgatatccg
      421 cttaaacgga ggcagtatca agggcggcaa gcagcttgct ttactggcag acgataacat
      481 tactgccaaa actaccaatc tgaatactcc cggcaatctg tatgttcata caggtaaaga
      541 tctgaatttg aatgttgata aagatttgtc tgccgccagc atccatttga aatcggataa
      601 cgctgcccat attaccggca ccagtaaaac cctcactgcc tcaaaagaca tgggtgtgga
      661 ggcaggctcg ctgaatgtta ccaataccaa tctgcgtacc aactcgggta atctgcacat
      721 tcaggcagcc aaaggcaata ttcagcttcg caataccaag ctgaacgcag ccaaggctct
      781 cgaaaccacc gcattgcagg gcaatatcgt ttcagacggc cttcatgctg tttctgcaga
      841 cggtcatgta tccttattgg ccaacggtaa tgccgacttt accggtcaca ataccctgac
      901 agccaaggcc gatgtcaatg caggatcggt tggtaaaggc cgtctgaaag cagacaatac
      961 caatatcact tcatcttcag gagatattac gttggttgcc ggcaacggta ttcagcttgg
     1021 tgacggaaaa caacgcaatt caatcaacgg aaaacacatc agcatcaaaa acaacggtgg
     1081 taatgccgac ttaaaaaacc ttaacgtcca tgccaaaagc ggggcattga acattcattc
     1141 cgaccgggca ttgagcatag aaaataccaa gctggagtct acccataata cgcatcttaa
     1201 tgcacaacac gagcgggtaa cgctcaacca agtagatgcc tacgcacacc gtcatctaag
     1261 cattaccggc agccagattt ggcaaaacga caaactgcct tctgccaaca agctggtggc
     1321 taacggtgta ttggcactca atgcgcgcta ttcccaaatt gccgacaaca ccacgctgag
     1381 agcgggtgca atcaacctta ctgccggtac cgccctagtc aagcgcggca acatcaattg
     1441 gagtaccgtt tcgaccaaaa ctttggaaga taatgccgaa ttaaaaccat tggccggacg
     1501 gctgaatatt gaagcaggta gcggcacatt aaccatcgaa cctgccaacc gcatcagtgc
     1561 gcataccgac ctgagcatca aaacaggcgg aaaattgctg ttgtctgcaa aaggaggaaa
     1621 tgcaggtgcg cctagtgctc aagtttcctc attggaagca aaaggcaata tccgtctggt
     1681 tacaggagaa acagatttaa gaggttctaa aattacagca ggtaaaaact tggttgtcgc
     1741 caccaccaaa ggcaagttga atatcgaagc cgtaaacaac tcattcagca attattttcc
     1801 aacccaaaag gcagccgaac tcaaccaaaa atccaaagaa ttggaacagc agattgcgca
     1861 gttgaaaaaa agctcgccta agagcaagct gattccaacc ttgcaagaag aacgcgaccg
     1921 tctcgctttc tatattcaag ccatcaacaa ggaagttaaa ggtaaaaaac ccaaaggcaa
     1981 agaatatctg caagccaagc tttctgcaca aaatattgac ttgatttccg cacaaggcat
     2041 cgaaatcagc ggttccgata ttaccgcttc caaaaaactg aaccttcacg ccgcaggcgt
     2101 attgccaaag gcagcagatt cagaggcggc tgctattctg attgacggca taaccgacca
     2161 atatgaaatt ggcaagccca cctacaagag tcactacgac aaagctgctc tgaacaagcc
     2221 ttcacgtttg accggacgta cgggggtaag tattcatgca gctgcggcac tcgatgatgc
     2281 acgtattatt atcggtgcat ccgaaatcaa agctccctca ggcagcatag acatcaaagc
     2341 ccatagtgat attgtactgg aggctggaca aaacgatgcc tataccttct taaaaaccaa
     2401 aggtaaaagc ggcaaaatca tcagaaaaac caagtttacc agcacccgcg accacctgat
     2461 tatgccagcc cccgtcgagc tgaccgccaa cggtatcacg cttcaggcag gcggcaacat
     2521 cgaagctaat accacccgct tcaatgcccc tgcaggtaaa gttaccctgg ttgcgggtga
     2581 agagctgcaa ctgctggcag aagaaggcat
//
LOCUS       DAXHRP010000206         2598 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.206, whole genome shotgun sequence.
ACCESSION   DAXHRP010000206 DAXHRP010000000
VERSION     DAXHRP010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.206"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(214..285)
                     /locus_tag="ACFM72_002006"
     tRNA            complement(214..285)
                     /locus_tag="ACFM72_002006"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(250..252),aa:Arg,seq:cct)
     gene            complement(305..751)
                     /locus_tag="ACFM72_002007"
     CDS             complement(305..751)
                     /locus_tag="ACFM72_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HFC6258513.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(756..1730)
                     /gene="ispB"
                     /locus_tag="ACFM72_002008"
     CDS             complement(756..1730)
                     /gene="ispB"
                     /locus_tag="ACFM72_002008"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HFC6258514.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1954..2262
                     /gene="rplU"
                     /locus_tag="ACFM72_002009"
     CDS             1954..2262
                     /gene="rplU"
                     /locus_tag="ACFM72_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HFC6258515.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2287..2559
                     /gene="rpmA"
                     /locus_tag="ACFM72_002010"
     CDS             2287..2559
                     /gene="rpmA"
                     /locus_tag="ACFM72_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HFC6258516.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          763 a          698 c          575 g          562 t
ORIGIN      
        1 aatttaatcc actatatcat aaaacaacag atttccaagc cggaacatct tttacggagc
       61 ctgaaaatca tttcatgatt ctaccgtcct aaaggtcggt ttttcaagca ggaagaaaaa
      121 gttttcagat ggcaaaaaag ccctccaaca ctgaaaggcc ttatatcgga aacttcccgc
      181 aacacgggaa acagacaaat gcaaatcgtc aaacctcgcc aacaggaatc gaacctgtat
      241 tttacgctta ggaggcatac gttctatccg ttgaactatg gcgagccgaa atgaaaagga
      301 gattttaacc ctttccgacg acaaaagaca agatgccggc cgcaatcagc ggcccgacag
      361 ggataccgcc cataaatgcc accccgataa ccgtcccgat taacagccct gtaattaaaa
      421 caggctgctg tcccatcaaa ggcacgccgc gtcccgccag ccaagccacg aaaataccga
      481 taaaaacggc ggatatcatt ttaaaattca aaaattcggc aacgggagga acctgcgcct
      541 ttcctgaaac caacggactc aaaaccccta tggtcaaaag aatgataccg agattcaacc
      601 catgcttctc gaccaacggg acaaactgta ccaatgccgt ctgctgcatc agcagcaata
      661 tggttgccga gatggtaatc gaattgttgt tgctgaccac ccccaacaga atcagcgtaa
      721 ccagaaacag gggaacaaaa ctgaaattca tcgcctcaag acaccctgac caaagattcc
      781 ttcgccagct gaatcatggc atccttcact tcgctgtcgg gcagggcatc caaggcggta
      841 acggcacaat cgactgcttt gcgcgcctcg cctatcgaat atgccaaagc atccgaacgg
      901 acgacataat cgtggatttt ctcaaaatag ctgcgatctg cattttccaa agcagtacgc
      961 acatcgttcg caacctgttc ggaaccctga cgcatcagat aaatcaaagg caaagtcggt
     1021 tttccttccg ccaaatcgtc gccgacgttt ttgccggttt cttcggtttc gccagaatag
     1081 tccagcacat cgtcaataat ttggaatgcc gtaccgacat acataccgta gtctttcaac
     1141 gcctgttcgt gttcggggga agccttgccc aaaattgcgc cgacttgagc ggcagcttca
     1201 aacaattttg ccgttttata ttggatgact tggatatatt gttcttcggt aatgtccgta
     1261 ttgccgatgt tcatcagctg catgacttcg ccctcggcaa taatgttggt tgcatccgcc
     1321 atcacttcca aaacgcgcat actgcccgag gcaaccatca gttgaaaggc gcgcgtgtat
     1381 aaaaagtcgc caaccaacac agccgccgca ttgccgaaca gattgtttgc cgttgcccgc
     1441 ccacggcgca aatcgctttc atcgacgaca tcgtcgtgca ggagggtgga agtgtggata
     1501 aactcgacca tcgccgccag cgcatacagt ttctcgtcat cataaccgac cgccttaccc
     1561 gccaaaatcg tcataatcgg acgcaggcgt ttgccgcccg cgctgatgat atatgtaccg
     1621 atttgcgaaa tcagtgcgac atcggattgc accgcacggt tgatgacttc attgactttg
     1681 gcaaggtctt caggcagatg tcgctggaaa tagggcagat tctcgagcat ggcagactct
     1741 caggtttacg tttccgtcaa acggcagata ccgcttgaaa gctgattcaa atagcgggca
     1801 attatatcag caaagccatc agggtacatc ttttcagacg gcatatgatt gtccgaaccg
     1861 cgcaaacttt gacaaaacag gcaaataaca atacaatgcc gagttccgca caatggtgtg
     1921 cggatattaa ccataaccct tatggagttg agtatgtacg cggtcgtaaa aaccggcggc
     1981 aaacagtata aagtttccgt cggcgaaaaa ttgaaagtag aacagatacc agccgaactc
     2041 gacagccaaa tcgaactgac cgaagttttg atgattgctg acggcgaatc tgtaaaagtt
     2101 ggcgcaccct ttatcgaagg tgcaaaagta acggctaaag tagtggcaca cggtcgtggc
     2161 gaaaaagtcc gcatcttcaa aatgcgccgc cgcaaacact accaaaaacg ccaaggccac
     2221 cgccaaaatt tcacccaaat cgaaatcgtg gcaatcgcct aaccttaaaa cttaggagca
     2281 ttacaaatgg caagtaaaaa agcaggcggc agcacccgca acggtcgcga ttcagaagcc
     2341 aaacgcttgg gcgttaaagc ctacggcaac gagctgattc ccgcaggttc catcatcgta
     2401 cgccaacgcg gtaccaaatt ccacgcaggc gacaacgtag gtatgggcaa agaccacact
     2461 ttgttcgcca aagttgacgg ttatgtcgaa ttcaaaacca aaggcgcgct gaaccgtaaa
     2521 actgtcagca tccgtcctta caccggttct gaagaataat ccaaccgata cctgaagccg
     2581 catcttttca cgatgcgg
//
LOCUS       DAXHRP010000207         2565 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.207, whole genome shotgun sequence.
ACCESSION   DAXHRP010000207 DAXHRP010000000
VERSION     DAXHRP010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.207"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            242..2467
                     /locus_tag="ACFM72_002011"
     CDS             242..2467
                     /locus_tag="ACFM72_002011"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HFC6258517.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFTRHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGDKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT          707 a          783 c          591 g          484 t
ORIGIN      
        1 aatttaaacc actataaaat caatttcacc gaaaatatgc cgccgcacat caggcacagc
       61 acctccgacc gccaccaaac gcgggaaaac catttccccc ttcctttcac gctgccgcgt
      121 tcaaacacgc caagatcgaa caaagcgcga acaaagccgc caaaatatgc cataatagcc
      181 gcgcacattc cccgcgcaat gtgttccaaa agaaaaaacc aacctacaag agaataatcc
      241 tatgactcaa aaatccacca ttgtttatac ccataccgac gaagcccccg cgctggcgac
      301 ccaatcgctg ctgccgattg tgcaggcttt tacccgccac gccgatattg atgtcaaaac
      361 tgccgacatt tccctgtccg gccgtatttt ggcggcattc cccgaatatc tgaccgaagc
      421 gcaacgcgta cccgacgcgc ttgccgaatt gggcgaactg gtaaaacaac ccgatgcaaa
      481 cgtaatcaaa ctgccgaaca tcagcgcatc cgtaccgcaa ctgaccgccg cgattaaaga
      541 attgcagtct aaaggctttg ccgttcccga ttatcctgcc gacccgcaaa ccgatgaaga
      601 aaaagccgtg cgcgaacgct acgaccgcat caaaggcagc gcggtaaacc ctgtcctgcg
      661 tgaaggcaac tccgaccgtc gcgcccccaa agcggtgaaa aactttgcca aaaaaaatcc
      721 gcacagcatg ggcgcatgga caaaagactc caaaacccac gttgccacca tgcaaagcgg
      781 cgactttttc cataacgaac aatccgttac cgtacctgaa gcgacttccg tatccatcgt
      841 gttcaccgac aaacaaggca ataaaaaaga gctgcgcgcg cctgttgccc tgaaagccgg
      901 cgaaatcatc gacgcgaccg tgatgagtaa aaaagccctg ctcgccttcc ttgccgaaca
      961 agtaaaagat gcgaaagcaa aaggcgtgtt gttctcgctg cacatgaaag ccacgatgat
     1021 gaaagtgtcc gacccgatta tcttcggaca cgccgtcaaa gtattcttcg cgcctgtttt
     1081 tgaaaaattc ggcgacaaac tggctgctgc cggcgtcaac gttaacaacg gcttcggcaa
     1141 cctgcttgcc aatctggaca aactggatgc ggacacccgc accgccgtcg aagccgaaat
     1201 cgccgccgtt tacgccgcca accccgattt ggcgatggtc gattccgata aaggcattac
     1261 caacctgcac gttcccagcg atgtcatcgt tgatgcttct atgcctgcga tgattcgtaa
     1321 ctccggccgt atgtgggata aagacggcaa agcgcaagac accaaagccg tgattcccga
     1381 cagcagctac gccggcgttt accaagcaac catcgacttc tgccgcgaac acggcgcatt
     1441 tgacccgaca accatgggta ctgtgcccaa cgtcggactg atggcgcaag cggcggaaga
     1501 atacggctcg cacaacaaaa cctttgaaat cgaagccgac ggccaagtcc aagtcattga
     1561 tgcggcagga aaagtcctaa tgcagcacga cgttgaagcc ggcgacatct ggcgtatgtg
     1621 ccaaaccaaa gacgctccgg ttaaagactg ggtacaactt gccgtcaacc gcgcccgtct
     1681 gagcaacacg cctgccgtgt tctggctcga cgaaaaccgt ccgcacgaca agagcctgct
     1741 cgccaaggtt aaagcctacc ttgccgaact ggataccaat ggcctcgaca tccgcgtcct
     1801 cgctcctgaa gaagccgcca agttcagctt gggtcgtctg aaaaacggcg aagacaccat
     1861 ctccgtaacc ggtaatgtct tgcgcgacta cctgaccgac ttgttcccaa ttttggaact
     1921 cggcacaagc gcgaaaatgc tgtctatcgt tccattgatg aacggcggcg gtatgtttga
     1981 aaccggcgcg ggcggttctg caccgaaaca tgttcaacaa ttcctcgaag aaaaccattt
     2041 gcgctgggac tcgctgggcg aattcctcgc actcgccgta tcgtttgaac atttggcgca
     2101 aaaaaccggc aatgccaaag cccaagtcct cgccgacact ttggatgcag ccaccgaaaa
     2161 actgctgttg aacgacaaat cgcctaaacg taaagccggc gaactcgaca accgcggcag
     2221 ccatttctac ctcaccctct actgggcgca agaattggcg gcgcaagaca aagatgccga
     2281 actgaaagcc gcatttacgc cattggcagc cgctttgacc gccgacgaag cgaaaatcgt
     2341 tgccgagctt tccgccgtac aaggcaaagc ggccgacatc ggcggctact acgccgccaa
     2401 tcctgaaaaa gccgcacaag tgatgcgtcc gagcgtaacc tttaatcagg cactaaacgc
     2461 cttataagca caaaggtaaa aatgccgtct gaacattcgt cgttcagacg gcattagtta
     2521 tccctatctg cctgattatg attaaacgcc gcacccattg gatat
//
LOCUS       DAXHRP010000208         2556 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.208, whole genome shotgun sequence.
ACCESSION   DAXHRP010000208 DAXHRP010000000
VERSION     DAXHRP010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.208"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>2556
                     /locus_tag="ACFM72_002012"
     CDS             <1..>2556
                     /locus_tag="ACFM72_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFC6258518.1"
                     /translation="GRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPAATVLNAGRNLV
                     IESKANVNNAKGSTNLSTGGRTTINDATIQAGSSVYSSTKGDTELGENTRIIAENVTV
                     LSNGSIGSAAVIEAKDTAHIEAGKPLSLETSNVASNIRLNNGSIKGGKQVVLMADDDI
                     QAKASHLNASGNLYIHAGKDLDLNADKDLSTQSISLRADNTALISSNGNTLTAEKNLD
                     IQAGSLSVRQSNLQSSGGNVQMSATKGNISLNQSWINASQNIDTAALQGNIISDGLTA
                     VAEVGRVSLLANGNVDFNGLNTLIAEGDINAGSVGKGRLKMDNTDIYASAGDVKLVAG
                     GQLDLGNGTVNGGHISLDSNKGSMVVQNVHLNARASLKVDADQTLTINNSKLNSDHNT
                     QINTNHGHMTLNQLDAHSRRHMSISAQGKGKGKDSGQILQNDQQNSKSTLAADGVLSL
                     NSSALQVLDNTTLRGGAINIKAGGGIIKRGHIDWETQDTATMRSAELKPLSGMMSIES
                     GGDNPLTVEPGNRIVSAGDLAVNHNGTFQISARAGNNGNPSAQTASVSAKGNIGIVAG
                     EVDIDAANIAAGKDLALVATKGNISLNSIRNTFSNYQLKTDKHNITQQLTDVEQELSK
                     LTSDPKYRKAQDLSQMLRRKYKRRDKVFGDSEARLRGLRAKINAADEAWAERQSPVKA
                     LLERKQLLQQALLTVSQPGSGHENQGSTLSGQNIKLLAAGGIRIQGSKVAATQQANIQ
                     AAGFLPAPAAEELQEGRLQSAIDISGVLDTFEYGQQGSDKYGYAIFSRPSEISGKTGV
                     TLSAPNANENSRISLSAANIEAENGKIKIQSYGDQYYYARQGELYTFERRSYKT"
BASE COUNT          792 a          554 c          623 g          587 t
ORIGIN      
        1 tggtcggatc gagagcaaag gcttattggt tattgatacc ggggaggaca tcggtttgcg
       61 taacggagcg gtcgttcaaa acaacggcaa ccgccctgct gctacggtat taaatgccgg
      121 ccgtaatttg gttatcgaaa gcaaagcaaa tgtgaacaat gctaaaggtt cgaccaatct
      181 gtcgaccggc ggtcgtacta cgatcaatga tgctactatt caagcgggca gttccgtgta
      241 cagctccacc aaaggcgata ctgaattggg tgaaaatacc cgtattattg ctgaaaacgt
      301 aaccgtattg tccaacggca gtattggcag tgctgctgta attgaggcta aagacactgc
      361 acacattgaa gcgggtaaac cgctttcttt agagacttca aacgttgctt ctaacatccg
      421 tttgaacaac ggtagcatta aaggcggaaa gcaggtggta ttgatggctg atgacgacat
      481 tcaggcaaaa gcctcccacc tgaatgcgtc cggcaatctg tatattcatg caggtaagga
      541 tctggatttg aatgccgata aagacttatc aacacaaagt atcagcctga gggcagacaa
      601 caccgccctc atcagcagca acggtaacac cttgactgca gaaaagaatc tggatattca
      661 ggcaggtagc ttgagtgtgc gtcaaagtaa tctgcaatcc agtggcggta atgtgcagat
      721 gagcgcgact aaaggcaaca tcagcttgaa tcagagttgg ataaatgcca gtcagaatat
      781 tgatacggca gcacttcaag gcaatattat ttcagacggt ctgactgctg ttgccgaagt
      841 tggacgcgta tctcttcttg ccaacggcaa tgttgatttc aacggtctaa ataccttgat
      901 tgcggaagga gacattaatg ctggttcagt cggtaaaggc cgtctgaaaa tggacaatac
      961 cgatatttat gcttctgcag gcgatgtgaa actggttgcc ggaggtcaat tagatttagg
     1021 caacggcacc gttaacggcg gtcatatcag cttagacagc aataaaggca gcatggtggt
     1081 gcagaatgta cacctgaatg cccgcgcatc actgaaagtg gatgcggatc aaactttaac
     1141 cattaataac agcaagctca attccgatca caatacccag attaatacaa atcatggtca
     1201 tatgacgctt aatcagcttg atgctcattc acgtcgtcat atgagtatca gtgcacaggg
     1261 taaaggcaaa ggaaaagaca gcggtcaaat tttacaaaac gaccagcaaa acagtaaaag
     1321 tactttggcg gcagatggtg tattgtcatt gaacagcagc gcattacagg ttttggacaa
     1381 tactaccctg cgcggtggcg cgataaacat caaagctggc ggaggcatca tcaaacgggg
     1441 gcatatcgat tgggaaaccc aagatacggc aactatgcgt tcagcggaac tgaaaccact
     1501 gtccggtatg atgtcgatag aatcgggcgg tgataaccct ttaaccgttg aacccggtaa
     1561 ccgtatcgtt tctgcaggtg atttggccgt gaaccacaac ggcacattcc aaatcagtgc
     1621 cagagcagga aataacggca atccgagtgc gcaaacagcc agcgtttcag ctaaaggcaa
     1681 tatcgggatt gtggcgggag aggtggatat tgatgcagca aatattgccg cagggaaaga
     1741 tttggcttta gtggcaacta aagggaatat ttcactaaac agtattagga atacgtttag
     1801 taactatcaa ttgaaaacag ataaacacaa tatcacacag caacttactg atgtagagca
     1861 ggagcttagt aagttaacga gcgatcctaa atatcgtaaa gcacaggatc tttcacaaat
     1921 gttgaggcgt aaatataaga ggcgtgacaa agtattcggt gatagtgagg ccagattacg
     1981 tggtttacga gcaaagataa atgctgctga tgaggcttgg gcagaacgcc aatccccagt
     2041 aaaagcgtta cttgaacgta aacaattgtt acaacaagcc cttttaacag tttcccaacc
     2101 gggtagtggt cacgaaaacc aaggtagcac ccttagcggt caaaatatca aactgctcgc
     2161 tgcaggtggt atccgtatcc agggctccaa agttgctgcc acccaacagg caaatatcca
     2221 agctgcagga tttttacctg caccagccgc agaggaactg caagaaggtc gacttcaatc
     2281 agccattgac atcagcggtg tacttgatac ttttgaatat ggtcagcaag gcagcgataa
     2341 atacggctat gccattttca gcaggccatc tgaaatttca ggaaaaacag gtgttaccct
     2401 ctctgcacca aatgccaatg agaacagccg catcagtctg agtgcggcaa acatcgaagc
     2461 tgaaaacggc aaaatcaaaa ttcaatctta cggtgaccaa tattactatg cgagacaggg
     2521 cgaactctat acctttgaac gccgcagcta caaaac
//
LOCUS       DAXHRP010000209         2554 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.209, whole genome shotgun sequence.
ACCESSION   DAXHRP010000209 DAXHRP010000000
VERSION     DAXHRP010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.209"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..181
                     /locus_tag="ACFM72_002013"
     CDS             <1..181
                     /locus_tag="ACFM72_002013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258519.1"
                     /translation="REGRGKVAFRHSRAGFVIPAFVNPLYSRRFLHFRQNLSTKNNTM
                     QIKTIISFAKIPPPC"
     gene            276..2450
                     /gene="fetA"
                     /locus_tag="ACFM72_002014"
                     /gene_synonym="frpB"
     CDS             276..2450
                     /gene="fetA"
                     /locus_tag="ACFM72_002014"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HFC6258520.1"
                     /translation="MNTPLFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQHMTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNNEKDYEAGKGFRNNFNGGK
                     TVPYSALDKRSYLAKIGTSFGGDDHRIVLSHMKDQHRGIRTVREEFTVGGDDSRINIK
                     RQAPAYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPN
                     HTQITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNGEFKISDKKPDPTDPKK
                     EIAKTDEEKAKDKIDMDLVHSYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKV
                     KTHDGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIA
                     DGTKAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYI
                     KNHGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAY
                     RFQNPNLEIGWRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDVFANWKPLGKD
                     TLNVNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          732 a          732 c          578 g          512 t
ORIGIN      
        1 gcgggaagga cgcggaaagg ttgcttttcg tcattcccgc gcaggcttcg tcattcccgc
       61 atttgttaat ccactatatt cccgccgttt tttacatttc cgacaaaatc tgtcaacaaa
      121 aaacaacaca atgcaaataa aaacaataat cagctttgca aaaatccccc ccccctgtta
      181 atataaataa aaataattat taattatttt tcttatcctg ccaaatctta acggtttgga
      241 tttccttcct ttcatacact caagaggacg attgaatgaa taccccattg ttccgtctca
      301 gcctgctctc gcttaccctg gcggcaggct ttgcccacgc ggcagaaaat aatgccaatg
      361 tcgcattgga taccgttacc gtaaaaggcg accgccaagg cagcaaaatc cgtaccaaca
      421 tcgttacgct tcaacaaaaa gacgaaagca ccgcaaccga tatgcgcgaa ctcttaaaag
      481 aagagccctc catcgatttc ggcggcggta acggcacgtc ccaacatatg accttgcgcg
      541 gcatgggtca gaactctgtc gacatcaagg tggacaacgc ctattccgac agccaaatcc
      601 tttaccacca aggcagattt attgtcgatc ccgctttggt taaagtcgtt tccgtacaaa
      661 aaggcgcggg ttccgcctct gccggtatcg gcgcgaccaa cggcgcgatt atcgccaaaa
      721 ccgtcgatgc ccaagacctg ctcaaaggct tggataaaaa ctggggcgtg cgcctcaaca
      781 gcggctttgc cagcaacgaa ggcgtaagct acggtgccag cgtattcgga aaagagggca
      841 acttcgacgg cttgttctct tacaaccgca acaatgaaaa agattacgaa gcaggtaaag
      901 gcttccgtaa taatttcaac ggcggcaaaa ccgtaccgta cagcgcgctg gacaaacgca
      961 gctacctcgc caaaatcgga acaagcttcg gcggcgacga ccaccgcatc gtgttgagcc
     1021 atatgaaaga ccaacaccga ggcatccgca ctgtgcgtga agaatttacc gtcggcggcg
     1081 acgattcacg gataaatatt aaacgccaag cccctgctta ccgcgaaacc acccaatcca
     1141 acaccaactt ggcgtacact ggcaaagatt tgggctttgt cgaaaaactg gatgccaacg
     1201 cctatgtgtt ggaaaaagaa cgctattccg ccgatgacag cggcaccggc tacgcaggca
     1261 atgtaaaagg ccccaaccat acccaaatta ccactcgggg tatgaacttc aacttcgaca
     1321 gccgccttgc cgaacaaacc ctgctgaaat acggtatcaa ctaccgccat caggaaatca
     1381 aaccgcaagc gtttttgaac ggcgaattta agatctccga taagaaacca gacccaaccg
     1441 atcccaaaaa agaaatagct aagaccgatg aagaaaaagc gaaagacaag atagatatgg
     1501 atcttgtcca ttcctacaaa ctgtccaatc cgaccaaaac cgataccggc gcgtatatcg
     1561 aagccattca cgagattgac ggctttaccc tgaccggcgg gctgcgttac gaccgcttca
     1621 aagtgaaaac ccacgacggc aaaaccgttt caagcagcaa ccttaacccg agtttcggtg
     1681 tgatttggca gccgcacgaa cactggagct tcagcgcgag ccacaactac gccagccgca
     1741 gcccgcgcct gtatgacgcg ctgcaaaccc acggcaagcg cggcatcatc tcgattgccg
     1801 acggcaccaa agccgaacgc gcgcgcaata ccgaaatcgg cttcaactac aacgacggca
     1861 cgtttgccgc caacggcagc tacttctggc aaaccatcaa agacgcgctt gccaatccgc
     1921 aaaaccgcca cgtctctgcc gccgtccgtg aagccgtcaa tgccggttac atcaaaaacc
     1981 acggttacga attgggcgcg tcctaccgca ccggcggcct gactgccaaa gtcggcgtaa
     2041 gccacagcaa accgcgcttt tacgatacgc acaaagacaa gctgttgagc gcgaatcctg
     2101 aatttggcgc acaagtcggc cgcacttgga cggcctccct tgcctaccgc ttccaaaatc
     2161 cgaatctgga aatcggctgg cgcggccgtt atgttcaaaa agccgtgggt tcgatattgg
     2221 tggcaggtca aaaagaccgc aacggcaaat tggaaaacgt tgtacgcaaa ggtttcggtg
     2281 tgaacgatgt cttcgccaac tggaaaccgc tgggcaaaga cacgctcaat gttaatcttt
     2341 cggttaacaa cgtgttcaac acgttctact atccgcacag ccaacgctgg accaataccc
     2401 tgccgggcgt gggacgtgat gtacgcttgg gcgtgaacta caagttctaa aacgcgcatc
     2461 ccgaaaaaat gccgtctgaa agcctttcag acggcatctg ttctgataat ttgatatata
     2521 gtggattaac aaaaaccagt acggcgttgc ctca
//
LOCUS       DAXHRP010000210         2511 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.210, whole genome shotgun sequence.
ACCESSION   DAXHRP010000210 DAXHRP010000000
VERSION     DAXHRP010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.210"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            1..208
                     /locus_tag="ACFM72_002015"
                     /pseudo
     CDS             1..208
                     /locus_tag="ACFM72_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
     gene            complement(255..1664)
                     /gene="dacB"
                     /locus_tag="ACFM72_002016"
     CDS             complement(255..1664)
                     /gene="dacB"
                     /locus_tag="ACFM72_002016"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HFC6258521.1"
                     /translation="MNFPKTAAFLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDHFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFAQNNLKITASQAACLSVKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGNGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMVVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1829..2395
                     /locus_tag="ACFM72_002017"
     CDS             1829..2395
                     /locus_tag="ACFM72_002017"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HFC6258522.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          604 a          603 c          698 g          606 t
ORIGIN      
        1 acagcacaca ttttgccgaa cgacaaaacc atattaatgg aattgagaac ttttggaacc
       61 aggcaaaacg tcatttacgc aagtttaacg gcattcccaa agcgcatttt gagctgtatt
      121 taaaggagtg cgaatggcgt tttaacaaca gtgagataaa agttcttgtt ccattttaaa
      181 acaattagta aaatcgagtt tatcctagtt atctaggaca gccccttaaa tttaatccac
      241 tatattttcc tgtttcaggc tcggcgttct ttgcacatca gtttcgcatc cagccagcca
      301 tcgccgccgg agatgatgtt gttggcaacg aagttgtcca agtcgggcag cagggaaacg
      361 gcgcgaccgc tgttgatgat gacgaccacc accatcggtt tgtcgcccag ccagtagcct
      421 gccaatgcgc ggacattgtt gagcgtgccg gttttcaggc gcagaagccc accgctttgt
      481 ttgaagcggt tgcgtaaagt tccgtctgtg ccggcgatgg gcagcgtgtc gatgaaatct
      541 tgtgcaaacg ggctgaaata agccgtttcc aacatttgcg ccatcattct cgccgttacc
      601 ctttcttttc tagacagacc tgaaccgttt tccaaaacca aatccgcaac atcgatgccc
      661 gacacggcaa gttcgcgccg gacggcagat gccgcctgtt cggaaacggc gggcagtttg
      721 ccgttgccgc cgagtttgag gaagacggaa cgcgcaatca gattgtccga acgcttgttc
      781 atgtccgtca aaatttcctt catcggcttt gagtgtgcaa cggcaagcgt ctgcgcgcct
      841 tccggcgtgt cggctatgcc gatgccgtct gaaatccgtc cgccgccgag cagccagtgg
      901 ttggtaaaac tttgccggat cagttcgtca agcgcgaaca tccggacacc gacaggcttg
      961 cccaaacagc tctcgggaat attgccgcgc aatttcagcg tattgtccga aaaagatgca
     1021 cgcatcagtt ttttgaccga aaggcaggcg gcttgggagg cggtaatttt caagttgttt
     1081 tgggcgaaaa tatgcggcaa aggcggatcg gtgaggatgt cggtactgcc ggcggcattg
     1141 cgttcggcgc gcaccataac cataccggca gacagcatag tcggattggg gggggtcata
     1201 aacggcgaac cgctgtcggc ttcaaaatgg tcgggactgc cgacttcgcc ccacaggctg
     1261 tggtcgagca tcaggtgtcc cgtgatattg cgtatgcctt gttcgcgcaa ctggcgttgg
     1321 acggcaagca ggttttcctg attgaaaacg gggtcgccgc tgcccgccca atacaggttt
     1381 ccgtcaagcg tgccgtcgtt taccgtaccg ttgcttttaa actcggtcgc ccagcggtaa
     1441 ttgctgccga aggttttaaa ggcggcaaac gcggtaacga gtttcattgt ggaggcgggg
     1501 ttgacgggga catccgagcg gtggtcaatg atgacttttc cgctgtcaag ctcttggaca
     1561 tatacggcga tttcgttttg cggaatgcga cccgtatcga gcgcgtgtgc ggcgagggag
     1621 gcgagaagca gcagcagaaa ggccgctgtt ttggggaaat tcataggtaa atctgttaca
     1681 taaaaaaagc aattataagg caaagccgga taagtgggaa cgctgtggcg gcgggccggc
     1741 ttgtttgcag gggaaatcac atatataata atcgctatca ttatgaaatg attgagacgc
     1801 acaaacttaa tattcaggag gaatgattat ggctaagaaa atcagtattt tggtgggcag
     1861 cctgcgccga gcttcttttg cgcgcaaagt ggcattgaat gcggcggaga tgttccccga
     1921 aggctggcag gcggaaatcg tcgaaatcgg acatctgccg ctttacaatt tcgattatga
     1981 cgaccctgcg gtggaagatg tgccgctacc cgaaagctac acggctttcc gcgaaacgat
     2041 taaggcttcg gacggcattt tgttcgttac gtccgaaaat aaccgcacca ttcccgcctg
     2101 tttgaaaaat gcggtggaca tcggctcgaa accgaatgcc gacgtggcgt ggaaaaacaa
     2161 accggccggt atcatcagcc attccgtcgg caagatgggc ggttacagtt cgcaaaaaaa
     2221 cctgcgcctt gcgctgtctt atttcgatat gcccgtaacc ggacagccgg aagtgttttt
     2281 gggcaattcg ccgacgctgt ttgatgaaaa cggcaaattg atcgactcgg caagggattt
     2341 tgttcagtca tatattaatc agtttgtcgg tttgattgaa agaaatgcca aataaacaaa
     2401 ccaagtcgaa aggccgcaaa accggttcgg gttttgcggc ttttttatat gggctgggca
     2461 gcgtcaaggt ttgccgtttg ccggataatg cgcggcaaat gaccggcgtg t
//
LOCUS       DAXHRP010000211         2507 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.211, whole genome shotgun sequence.
ACCESSION   DAXHRP010000211 DAXHRP010000000
VERSION     DAXHRP010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.211"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(26..832)
                     /locus_tag="ACFM72_002018"
     CDS             complement(26..832)
                     /locus_tag="ACFM72_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HFC6258523.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGLGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYSLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQVMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1053..2423
                     /gene="ffh"
                     /locus_tag="ACFM72_002019"
     CDS             1053..2423
                     /gene="ffh"
                     /locus_tag="ACFM72_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HFC6258524.1"
                     /translation="MLDNLTGRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVVGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          695 a          628 c          649 g          535 t
ORIGIN      
        1 ctcagacggc atctgttggc tcttcttatc ttttcagaat gatttccaat acgaacttgc
       61 tgcccatata ggcaatcata aggctgacaa atccgatgat ggtccacacg gcggcttttt
      121 tgccgcgcca tgcggtcatg ctgtgcttga gcaacagtcc gccgtaaatc agccatgaca
      181 atatgccgaa tacggtttta tgggtaaagg tcatgggttt gccgaatacg gcttcggcga
      241 agaatgtgcc gctgacgacg gaataggtca gcaggatgaa acctgcccac atgacctgga
      301 acatgagttt ttccaaactg agcagcgacg gcaggaatcc tgcgagcttg gagaagttcc
      361 tgcggtgcag gctccgattc agcagcaggg tcaaaacgga caataatgtt gcgatgccga
      421 acagcccgta tgcgagcagc gaagttccga tatgcagcat aaagggaagg tcggtaattt
      481 catatcccga gaattttcca ggaaaaacca aacctgacag cagcatcagt gcggcgcaag
      541 gatacagcag caactgcact ccgcgcagcg aataaaagaa gctgccggca aaataaataa
      601 acagcatcat ccaaacaatc aggctgccgg aatacccaaa gcccataatg atgattttgt
      661 cttgaatgac cggcataagc agtgccgcgc catggacggt caatgccgcg cccaaaaccg
      721 gcaattccgt cttccacggg taatcccggc cgagcccctg ctgttggcag tgccatgcaa
      781 atgcacccaa tcctgcgtaa accgccgtca aaaagatgaa aactgtcggc atggtggact
      841 ttctctaatc tatactgttg cgctgtatgc ggccgcttat gaaatattgg aacttttaac
      901 gttggaattg taaaatcccc gtttcgggca agccttgacg gatttgccga tatgctgtcc
      961 ggcacacaag ccgcatcaaa ttattttgat tttattttaa caaagaatgc ccctgatggg
     1021 gcaagctatt cttattcaga ccaaggacca gtatgttaga caatttaacc ggccgcttca
     1081 gcaatgttct caaaaacatc cgcgggcagg ccaaactgac cgaagacaat attaaagaag
     1141 ccttgcgcga agtccgcctc gccctgcttg aggcggatgt cgccctgcct gtcgtcaaag
     1201 agttcgtcaa caacgtcaaa gaaaaggccc tcggtcagga agtggtgggc agcctgacgc
     1261 cggatcaggc atttatcggc gtggtcaaca aagccctgac cgagctgatg ggcagggaaa
     1321 acaaaacgct ggatttgtcg gttgcgccgc ccgccgtcgt gttgatggca ggtttgcagg
     1381 gcgcgggcaa gacgacgacc gccggcaaac tcgcccgcct gctgaaaaac gatcagaaga
     1441 aaaaggtttt ggtcgtatct gccgacgttt accgccctgc cgcgattgaa caactgcgtc
     1501 tgttggccga acaggtcggc gtggactttt tcccatccga taccaaccaa aaaccggttg
     1561 agattgcaac tgccgccgtc gattacgcca aaaaacattt ttacgatgta ttgatggtcg
     1621 ataccgccgg ccgtttggca atcgatgagg agatgatgaa cgaaatcaaa gcccttcacg
     1681 cggcggttaa cccggtggaa actttgttcg tcatcgatgc gatgctgggt caggatgcgg
     1741 tgaacactgc tcaggcattt aatgaagccc tgccgctgac cggtgtcgta ttgaccaaga
     1801 tggacggcga ttcgcgcggc ggcgcagctt tgtccgtgcg ccacgtaacc ggcaagccga
     1861 ttaaatttat cggtgtcggc gaaaaaatca acggcctcga acctttccac cccgaccgtc
     1921 ttgccagccg tatcctcggc atgggcgacg tattgaccct gattgaagac gttcaaaaag
     1981 gtattgatga agaagccgcc gccaaaatgg cgaaaaagct gcaaaaaggc aaaggcttcg
     2041 acctcaacga ctttaaagaa caaatccagc aaatgcgcaa tatgggcggt ttggaaaacc
     2101 tgatgtcgaa aatgccgggc gaactgggtc aaatatcgaa acaaatcccc gaaggtacgg
     2161 ctgaaaaagc gatgggtaaa gtagaagcca tcatcaactc gatgacccct aaagaacgcg
     2221 ccaaccctgc cctgctcaaa gccagccgca aacgccgtat tgcaatgggt gcgggcacga
     2281 ccgtacagga agtgaacaaa ttgctcaaac agtttgaaca aatgcaacaa atgatgaaga
     2341 tgttcagcgg caacggcttg ggcaaactga tgcgtatggc gaaaggaatg aagggaatga
     2401 aaggaatgtt cccgggtttg taagccgatt tgaccgaaaa cgccgtctaa aatttcagac
     2461 ggcgtttttg ttttatattc tgatttatag tggattaaca aaaatca
//
LOCUS       DAXHRP010000212         2482 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.212, whole genome shotgun sequence.
ACCESSION   DAXHRP010000212 DAXHRP010000000
VERSION     DAXHRP010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.212"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(42..118)
                     /locus_tag="ACFM72_002020"
     tRNA            complement(42..118)
                     /locus_tag="ACFM72_002020"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(82..84),aa:Met,seq:cat)
     regulatory      268..367
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            458..2359
                     /gene="thiC"
                     /locus_tag="ACFM72_002021"
     CDS             458..2359
                     /gene="thiC"
                     /locus_tag="ACFM72_002021"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HFC6258525.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRG
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHINLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTSKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT          657 a          729 c          610 g          486 t
ORIGIN      
        1 aaaacaaaac ccctcggcat tgaaccgagg ggtttgatat ttggttgcgg gagcaggatt
       61 cgaacctacg accttcgggt tatgagcccg acgagctacc atgctgctcc atcccgcgtc
      121 agaagatgaa actatacggc agatttttta tgttgtcaaa cattacttcc gcgaaaaatc
      181 ataaaatttt gccgtccggc ggtttatgcc tgatttgaaa tattattttc tttacaaaag
      241 ttcatgttcg tgatttaatt ttggttaaca ttgaaacagg ggtgctgcct gatgttcagg
      301 cggctgagaa atacccttta cacccgatcg ggataatacc tgcgtgggga gttttcacgg
      361 attctgtctt tcagacagca ttggttttca aatgccgtct gaaaacgcaa aacgctcctg
      421 tttctttatt ctaaacgaga aaacaggagc attttttatg actacgccaa aaaaaaccgc
      481 caaaacttcc ggcaacgaag cgcgcgaact tgccgacttg agcgaagaca tcggcatccg
      541 cttcaaatat ccgaactcgg aacgcgtgta tctgcaaggc agccgtggcg acatccgcgt
      601 gcctttgcgc gaaatccgcc aggacgacac ttacacggcg caaggtacgg aagccaatcc
      661 gccgattccc gtctatgaca ccagcggcgt gtacggcgat ccggcggcac acatcaattt
      721 aaaacaaggt ctgccgcaca tccgcacggc gtggctggac gaacgcggcg ataccgaaat
      781 cctgcccaag ctctccagcg aatacggcat cgaacgcgca cacgatccga aaaccgccca
      841 tctgcgcttc aaccaaatca cccgcccgcg ccgcgccaaa gccggccgca acgtaaccca
      901 gcttcactac gcgcgccaag gcattatcac gcccgaaatg gagtttgtcg ccatacgcga
      961 acgtttaaaa ttagacgaat tgtcccaaaa accggaatac gccaagctct tgaaacaaca
     1021 cgcagggcaa agtttcggcg cgaatatccc gacccatccc gaccaaatca cgcctgaatt
     1081 cgtgcgccga gaaatcgccg ccggacgcgc gattattccc gccaacatca accaccccga
     1141 actcgaaccg atgattatcg gccgcaactt ccgcgtcaaa atcaacggca acttgggcaa
     1201 ttccgccgtc acttccagcc tgaccgaaga agtcgaaaaa atggtgtggt cgctgcgttg
     1261 gggtgcggac acgattatgg atttgtccac aggcgcgcat atccacgaaa cgcgcgaatg
     1321 gattatccgc aacgcgcccg tccccatcgg caccgtgccg atttaccaag cgttggaaaa
     1381 aaccggcggc atcgccgaag atttgacttg ggatttgttc cgcgacaccc tcatcgagca
     1441 ggcggaacaa ggcgtggact atttcaccat acacgcaggc gtgttgctgc gttatgtacc
     1501 gatgaccgcc aaccgcctca ccggcatcgt ctcgcgcggc ggttcgatta tggcgaaatg
     1561 gtgtttggca catcatcggg aaaatttcct ctacacgcat ttcgacgaaa tctgcgaaat
     1621 tatgaaagcg tatgacgtat cgttcagcct cggcgacggt ttgcgtcccg gctgcattgc
     1681 cgatgccaac gacgaatccc aattcgccga gctgcacacc ttgggcgaat tgacctccaa
     1741 agcgtggaaa cacgacgtac aggtgatgat cgaaggtccc ggccatgtac cgctgcaacg
     1801 cgtcaaagaa aatatgaccg aagagttgca acactgtttt gaagcaccgt tttacaccct
     1861 cggcccgctc gttaccgaca tcgcccccgg ctacgaccac atcacctcgg gcataggcgc
     1921 tgccaatatc ggctggtacg gcacggcgat gctctgttac gttaccccca aagaacattt
     1981 gggactgccc gacaaagaag acgtgcgtac cggcatcatc acctacaaac tcgccgccca
     2041 cgccgccgac ctcgccaaag gctggccggg cgcacagttg cgcgacaacg ccctgagcaa
     2101 ggcgcgtttc gagttccgct ggcgcgacca gttccgccta agcctcgacc ccgaacgcgc
     2161 cgaaagcttc cacgacgaaa ccctgcccgc cgaaggcgcg aaaatcgccc acttctgttc
     2221 gatgtgcggc cccaaattct gctcgatgaa aatcacgcag gaagtgcgcg actacgccga
     2281 caagcaaaaa gcccaacggc agggcatgga ggaaaaagcg gtcgagttcg tcaaaaaagg
     2341 agcgaagatt tacagctaaa acgtcaagca aaaaatgccg tctgaaaccc ggaaaaaagg
     2401 cttcagacgg cattctttcg cttgtgaaaa tatagtggat taacaaaaat caggacaagg
     2461 cgacgaagcc gcagacagta ca
//
LOCUS       DAXHRP010000213         2459 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.213, whole genome shotgun sequence.
ACCESSION   DAXHRP010000213 DAXHRP010000000
VERSION     DAXHRP010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.213"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..1038
                     /gene="rfbB"
                     /locus_tag="ACFM72_002022"
     CDS             <1..1038
                     /gene="rfbB"
                     /locus_tag="ACFM72_002022"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HFC6258526.1"
                     /translation="GFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYA
                     FEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAA
                     RAYWQQMPSEQHEAFRFHHISTDEVYGDLSGTDDLFTETTPYAPSSPYSASKASSDHL
                     VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLF
                     VEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYED
                     LITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNVLNG
                     SYRLERLGTGK"
     gene            1101..1967
                     /gene="rfbA"
                     /locus_tag="ACFM72_002023"
     CDS             1101..1967
                     /gene="rfbA"
                     /locus_tag="ACFM72_002023"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HFC6258527.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            2021..>2459
                     /gene="rfbC"
                     /locus_tag="ACFM72_002024"
     CDS             2021..>2459
                     /gene="rfbC"
                     /locus_tag="ACFM72_002024"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC6258528.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFYVLSDTAELTYKCTDYYKPEAEQVLIW"
BASE COUNT          626 a          698 c          598 g          537 t
ORIGIN      
        1 ggctttatcg gttctgccgt tgtccgtcat attatccgaa acacccaaga ttccgtcgtc
       61 aacctcgaca aactgaccta cgcgggcaat ctcgaatcgc tgaccgacat tgccgataat
      121 ccccgctatg ctttcgagca agtggacatt tgcgaccgcg ccgaactcga ccgcgtattc
      181 gcacaacacc ggcccgatgc cgtgatgcac ttggcggcgg aaagccatgt cgaccgctct
      241 atcggttcgg caggcgagtt tatccaaacc aatatcgtcg gcacattcaa tctgcttgaa
      301 gcagcccgcg cctactggca acaaatgccg tctgaacagc acgaagcctt ccgtttccac
      361 catatttcca ccgatgaagt ctatggcgat ttaagcggca cagacgattt gtttaccgaa
      421 accacgccct acgcgccgtc cagcccctac tctgcctcta aagcgtccag cgaccacctc
      481 gtccgcgcgt ggttgcgtac ttacggcttg ccgaccattg taaccaactg ctccaacaac
      541 tacggtcctt accattttcc ggaaaaactc attcctttga tgattctgaa cgcgcttgac
      601 ggcaaaccgc tgcctgtgta cggcgacggt atgcaaatcc gcgactggct gtttgtcgaa
      661 gaccacgcgc gcgcactgta tcaggttgtt accgaaggtg ttgtcggcga aacctacaat
      721 atcggcggcc acaatgaaaa agccaatatt gaagtcgtca aaaccatctg cgccctgctg
      781 gaagaactcg ctcccgaaaa accggccggt gtggcgcgtt atgaagattt gattactttc
      841 gtacaagacc gccccggcca tgacgtacgc tacgccgtcg acgcagccaa aatcaggcgg
      901 gatttgggct ggctgccttt ggaaaccttc gagtccggcc tccgcaaaac cgtgcaatgg
      961 tatctggaca acaaaacctg gtggcaaaat gtattgaacg gcagctatcg tttggaacgt
     1021 ttaggtactg gaaaatagtt ttcagacggc atcccgacgc aatgccgtct gaaaacccat
     1081 cgcaaaggaa gaaagaaaag atgaaaggca tcatactggc aggcggcagc ggcacgcgcc
     1141 tctaccccat cacgcgcggc gtatccaaac agctcctgcc cgtgtacgac aaaccgatga
     1201 tttattaccc cttgtcggtt ttgatgctgg cgggaatccg cgatattttg gtgattaccg
     1261 cgcctgaaga caacgcctct ttcaaacgcc tgcttggcga cggcagcgat ttcggcattt
     1321 ccatcagtta tgccgtgcaa cccagtccgg acggcttggc acaggcattt atcatcggcg
     1381 aagaatttat cggcaacgac aatgtttgct tggttttggg cgacaatatt ttttacggtc
     1441 agtcgtttac gcaaacattg aaacaggcgg cagcgcaaac gcacggcgca accgtgtttg
     1501 cttatcaggt caaaaacccc gaacgtttcg gcgtggttga atttaacgaa aacttccgcg
     1561 ccgtttccat cgaagaaaaa ccgcaacggc ccaaatccga ttgggcggta accggcttgt
     1621 acttctacga caaccgtgcc gtcgagttcg ccaaacagct caaaccgtcc gcacgcggcg
     1681 aattggaaat ttccgacctc aaccaaatgt atttggaaga cggttcattg tccgtccaaa
     1741 tattaggacg cggtttcgca tggttggaca ccggcaccca cgagagcctg cacgaagccg
     1801 cttcattcgt ccaaaccgtg caaaacatcc aaaacctgca catcgcctgc ctggaagaaa
     1861 tcgcttggcg caacggttgg ctttccgatg aaaaactgga agaattggcg cgcccgatgg
     1921 cgaaaaacca atacggccaa tatttgctgc gcctgttgaa aaaataatgt ttgaggccgt
     1981 ctgaaacttt tcagacggcc tttagatgaa agataaaaag atgaacatca ttgataccgc
     2041 cattcctgac gtaaaactgc ttgagcccca agtcttcggc gacgcgcgcg gcttttttat
     2101 ggaaaccttc cgcgacgagt ggtttaaaac ccaagtctgc gaacgcacct tcgtgcagga
     2161 aaaccactcc aaatccggca aaggcgtatt gcgcggcctg cactaccaaa ccgaaaacac
     2221 acaaggcaaa ctcgtacgcg tagttgtcgg cgaagtgttc gacgtggccg tcgatatgcg
     2281 cgaaggttcg ccgactttcg gcaaatgggc gggtgcaacc ctgtccgcgc aaaaccaatg
     2341 ccagctttgg atacccgaag gcttcgcaca cggtttttac gttttgagcg acacggccga
     2401 acttacctac aaatgcacag actattacaa gccagaagcc gaacaggttt taatatgga
//
LOCUS       DAXHRP010000214         2433 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.214, whole genome shotgun sequence.
ACCESSION   DAXHRP010000214 DAXHRP010000000
VERSION     DAXHRP010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.214"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            35..1390
                     /locus_tag="ACFM72_002025"
     CDS             35..1390
                     /locus_tag="ACFM72_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HFC6258529.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWYTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFILAKVPNQYHKA
                     GYFGCLALGALGFFSIFFIHNQYALILSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFILFPMLGSHQATMFLVAGAVLLLGAFSVFLIKETHGG
                     V"
     gene            1394..2404
                     /locus_tag="ACFM72_002026"
     CDS             1394..2404
                     /locus_tag="ACFM72_002026"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HFC6258530.1"
                     /translation="MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFS
                     VLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGR
                     NALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDRLTV
                     SYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDGLEVF
                     DFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDRNGL
                     VIFTAAPQDFARHDAGVYDALATEAQTLPDSLHWPEFGNIRLNKGDTREATIAYGIES
                     LS"
BASE COUNT          451 a          669 c          722 g          591 t
ORIGIN      
        1 actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc ctcaaacagc
       61 aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt tcggctttct
      121 cggcgttcag acggccttta ccctgcaaag ctcgcaaatg agccgcattt ttcaaacgct
      181 aggcgcagac ccgcacaatt tgggctggtt tttcatcctg ccgccgctgg cggggatgct
      241 ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt tgggcggccg
      301 ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga ttttgatgcc
      361 gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt tcggcgcgct
      421 gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta agatgatggt
      481 cggcgacatg gtcaacgagg agcagaaagg ctacgcctac gggattcaaa gtttcttagc
      541 gaatacgggc gcggtcgtgg cggcgattct gccgtttgtg tttgcgtata tcggtttggc
      601 gaacaccgcc gagaaaggcg ttgtgccgca gaccgtggtc gtggcgtttt atgtgggtgc
      661 ggcgttgctg gtgattacca gcgcgttcac gattttcaaa gtgaaggaat acgatccgga
      721 aacctacgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag ccaactggtt
      781 cgaactctta aaaaccgcgc ctaaagcgtt ttggacggtt actctggtac agtttttctg
      841 ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg aaaacgtttg
      901 gtacacgacc gatgcctctt ccgtgggtta tcaggaggcg ggcaactggt acggcgtatt
      961 ggcggcggtg cagtcggttg ctgccgttat ctgctcgttt attctggcaa aagtgccgaa
     1021 tcaataccat aaggcgggtt atttcggctg tttggcttta ggtgcgctcg gtttcttctc
     1081 tatcttcttc attcacaatc aatacgcact gattctgtct tataccttaa tcggcatcgc
     1141 gtgggcgggc atcatcactt atccgctgac gattgtaacc aacgccttgt cgggcaaaca
     1201 tatgggcact tacttgggct tgtttaacgg ctctatctgt atgccccaga tcgtcgcttc
     1261 gctgttgagc tttatcctct tccctatgct gggcagccat caggcaacca tgttcttggt
     1321 tgcaggcgcg gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag aaacacacgg
     1381 cggggtttga gcgatgagcg atacccccgc tacccgcgat tttggcctga tcgacgggcg
     1441 tgccgtaacc ggctatgtgc tgtccaaccg gcgtggtacg cgtgtctgcg tgctggactt
     1501 gggcgggatt gtgcaggaat tttccgtttt ggcagacggc gtgcgcgaaa acctcgtggt
     1561 gtcgttcgac gatgcggctt cctatgcgga caatccgttt cagattaaca agcagatagg
     1621 gcgcgtggcc ggacgcatcc gcggtgcggc gttcgacatc aacggcagga cttaccgcgt
     1681 ggaggccaac gaaggcagga acgcgctgca cggcggttcg cacgggctgg ccgttacccg
     1741 tttcaacgcg gtggcggcag acggccgttc ggtggtgctg cgcagccgcc tgcaacagtc
     1801 ggccgacggt tatcccaacg atttggattt ggatatttcc taccgcttgg acgaggacga
     1861 ccggcttacc gttagctatc gcgccaccgc gctcggcgac acggtgttcg acccgacgct
     1921 gcacatttac tggcggctgg acgcgggcct gcacgatgcg gttctgcata ttccgcaggg
     1981 cggacatatt ccggccgatg ccgaaaaact gcccgtctca acggtttcag acggcctcga
     2041 agtatttgat ttcagccggc ccaagccgct ggatgccgcc gttgccgccc tgcgccgcga
     2101 aacgggccgg gccggttttg acgacgctta ccgcgtgccg tccgatatag gccgtcccgc
     2161 cgctgtgttg caagccggac gccgccgtcg tatcagcata tacagcgacc gcaacggctt
     2221 ggtcatcttt accgccgccc cgcaggattt cgcgcggcac gatgcgggcg tttacgacgc
     2281 gctggcgacc gaggcgcaga cgctgcccga cagcctgcat tggcccgagt tcggcaatat
     2341 tcgtctgaac aagggtgata ccagggaggc gacgattgct tacggcatcg aatccctttc
     2401 ttaggagctt cctaacaccg gttgcagacg acc
//
LOCUS       DAXHRP010000215         2433 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.215, whole genome shotgun sequence.
ACCESSION   DAXHRP010000215 DAXHRP010000000
VERSION     DAXHRP010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.215"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(45..800)
                     /locus_tag="ACFM72_002027"
     CDS             complement(45..800)
                     /locus_tag="ACFM72_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HFC6258531.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGD
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGDRKDLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(927..2083)
                     /gene="nirK"
                     /locus_tag="ACFM72_002028"
                     /pseudo
     CDS             complement(927..2083)
                     /gene="nirK"
                     /locus_tag="ACFM72_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
BASE COUNT          545 a          550 c          683 g          655 t
ORIGIN      
        1 gcaacgccgt actggttttt gttaatccac tataattgaa ggggttatcg gcttgtgcaa
       61 cggaagccca agttgtgcaa gacatatttg gattgcaggc tggtacggat gccgtagcgg
      121 aggaaggcgg catagttgga cgagtcgctc gacccgatag acgcgccgct gcaaaacatt
      181 tgcgcgttgg cattgccgga agaaagcagg ctgctgttga aatcttccgt ccattcccaa
      241 atcagaccgt gcatatcata aacgccccag tagttcgggc gacctttgcc gacatcgtgc
      301 aggtctttcc ggtcgccatc cgcataccag tcgagaatag tgcggttgta gccgggttcg
      361 tttgagccgt ttttctgcgt ggcggaggca agtccggcaa attcccattc gtcaatggtc
      421 ggcaggcgtt tgccttgtgc ggcgcaatag gcgttggcgg cgaaccagga aacattggtt
      481 accggttgtt ttaaatcgcc cgccttcggc gcatagctgc ggctgccgtt tttcatccaa
      541 tgcttcaggt aagcgggttc tgcctgtttg gaaccgatcc tgcctttttg ccattggggg
      601 tggctgttga caaattcggc aaactcggca ttggtaacgg gatatttatc cagtttgaac
      661 ggtttgactt taatcagacc ggtatctttt ttcagataaa gcgggcggta gctgccgcct
      721 tcgatttgaa ccatttcggc agctgccgct tgagtgccgg cgagtgccgc acagagaaag
      781 agtaaccgtg caaacttcat atcatgcctc ctgacaggca gttaaaatca atcttccgaa
      841 aggaaagatt ggttgttaaa aaaccactgc cgtgcgtaat gaggtacggc ggcagtggtt
      901 tgtcccgcta atgacgggta tccgatttaa taaacgcttt tttcggattc agaggctgcc
      961 ggggcagaag ctgcgggggc ggaagcggca ggagccgcac cgttgccggc gtaagcggta
     1021 tcactcaatt tttgagtcat gatttcaggg ttttccgcac cctctacttt caattgaccc
     1081 agtgcgcctt tgttgaatgc gcggaagata gagtggtcaa ccaaagtgta gctgcccggg
     1141 atgtcgactt tgaattcgac gatggcagag ccgccggcag gaacgatggt gctttgtacg
     1201 ttttcgttaa tcagcttgtc gccttcaaca taaactttgt cgaagatttc gccgataacg
     1261 tggaaggaag acactaggtt cggaccgccg ttaccgacgt acatacgcac ggtttcgcct
     1321 gctttggctt tcagcgcgtt atcgccggcg atagaaccta catgaccgtt gaatacgacg
     1381 tattcaggct gttcggcaac ggctttgtcc atatcgaacg gcaggccttg cgcgcctttt
     1441 ttgcctttgg tgtagaagtc gccttggatg atgtagaact ctttatccac tttcggcaga
     1501 ccttctttag gctcgaccaa aatcagaccg tacataccgt tggcgatgtg cataccgacc
     1561 ggcgcgacgg tgcagtggta gatgtacaga cccggttgca gggctttgaa gctgaatgtg
     1621 gaagtgcgac ccggggcggt aaaggttgcg gctgcaccgc cgccctgacc ggttgcggcg
     1681 tggaagtcga cgttatgggg aacggtagaa gacgggttgt tggaaaattc cacttcaacc
     1741 gtatcgcttt cgcgtacgcg gatcatgcgg cccggaacgt cgccgtcaaa tgtccagtag
     1801 cggtattcca caccgtcttc catggtcatg gtttttcgac agtttccatt tttacgcgga
     1861 ctttggcagg atagtcgcgg tcgattgcgg gaggtacttc aggagcgtgg gtggtaactg
     1921 catcgataac gggcagttcg cctgtcggcg tttcggcggc ggtttgtgcg gcggaacttg
     1981 cggcttctgc ggaagcggca ggggcttgcg cggcaggttc gcctccgcag gcggctaatg
     2041 cgaataagga agcaatcatt gcagctaagg cttggcgttt cataatgttt tccttttgta
     2101 agaaaagtag aggaattggt taagaacttg gtgtgattat gcgtttgccc cattgggggc
     2161 attttgattt aagtcaaata attcataaaa tatgaactta aaatgatact tctaatactt
     2221 tatagctact aaaaattaca atgaataggc tgatttgctt aagggcttcg gcaaatcagg
     2281 caaaggcagg gtagttgccg actaaagaat aatgatagtt attatcatat atgtatttgt
     2341 tttatatgtg agtttctttg aacaaatgtt tatttgtgcg gtaaaccgtg ctacaatctt
     2401 taacattcat attctgtgaa ttttaaacag ctg
//
LOCUS       DAXHRP010000216         2400 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.216, whole genome shotgun sequence.
ACCESSION   DAXHRP010000216 DAXHRP010000000
VERSION     DAXHRP010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.216"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..1206
                     /locus_tag="ACFM72_002029"
     CDS             <1..1206
                     /locus_tag="ACFM72_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC6258532.1"
                     /translation="RVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHE
                     KTFFDKYGVRVSLLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDA
                     LYGRVHFGGQQNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNG
                     EYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVR
                     VYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRI
                     HAVKEDKVISADRYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAP
                     EAYDCAFLKAQAIHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDK
                     FARLPISWA"
     gene            1251..1541
                     /locus_tag="ACFM72_002030"
     CDS             1251..1541
                     /locus_tag="ACFM72_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258533.1"
                     /translation="MNIQLQGHIVGVKKINGQIEGKSFDYCCLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            1546..1743
                     /locus_tag="ACFM72_002031"
     CDS             1546..1743
                     /locus_tag="ACFM72_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258534.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            1817..2035
                     /locus_tag="ACFM72_002032"
     CDS             1817..2035
                     /locus_tag="ACFM72_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HFC6258535.1"
                     /translation="MKFINTCRKYGAKLAVVTAAPLALAAHANATLPDTAKNALEAAK
                     ADGMEAGWIVVGIFAALFVFSIVKRVMK"
     gene            2042..2320
                     /locus_tag="ACFM72_002033"
     CDS             2042..2320
                     /locus_tag="ACFM72_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258536.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
BASE COUNT          713 a          547 c          552 g          588 t
ORIGIN      
        1 agggttcagg aagtcttcga atgttacgaa acgtacataa cggacggtaa aggaaacctg
       61 ttaggcgttc ctcttcggcg cggtgtatca gattcggctt tcattgatca aattagcttt
      121 tcatttcatg aaaaaacctt tttcgataaa tacggcgttc gtgtaagtct tttggaagac
      181 gaagatttta ttcgcgccgc gtccatgctc gccgaagaag ttttcggttt cggtatctac
      241 aaagaatcca aaggttcggg cggtcgtttc tatgagcgct gttggttgat gggttcggaa
      301 gacgccctat acggtcgcgt ccattttggc ggccaacaaa ataccattct tttcgaactg
      361 accggcaccg gttgcggcgt cgcaaaagaa ggctgggaat cacgactttt cgcattcctg
      421 actaatgcaa tccgcccaaa aatcacacgc gttgacatcg caaaagactt tttcaacggc
      481 gaatacagcc cgaaccaagc ccgtgaagac cgaaataaag gtatgtttac ctgtcatcac
      541 gtcaaaccaa aaggcgaatg tttggggtca gattgggaag aagacgatga agccaaaatg
      601 accaaaggca agacctatgg tatcggctcc cgtgaatcgt ccaaatatgt ccgcgtctat
      661 gaaaaaggca agcagttggg cgataaaaca agcacatgga cgcgatttga aattgaattc
      721 aaagcaaaag acatcgttat ccctttcgaa gttttgcaga atccgggcga atatttcggc
      781 ggcgcatatc cgatttgcga acgattcgcc caaaaggcaa cgcgcataca cgcggttaag
      841 gaagataagg tcatttcagc cgaccgctac cttgaatggg taaaaaaaca gttcggacgt
      901 gcggcaaacg gtctgaaatt catttttccc gaattggaca aagccaaact gtttgaactg
      961 attgagccga gtcatcacaa gctgcccaag tctttggctc ccgaagccta cgactgcgcc
     1021 tttttgaaag ctcaagccat tcatgaacag cccgcattca aaccgtacaa agacccttac
     1081 tatatgtacg aatattacga gaatcttgaa aaacagcttg aacagcaaaa acacgtcaac
     1141 aatgaagaaa gctataacaa cttcatttac gacaaattcg caagactacc gatttcatgg
     1201 gcttaaagtg tctgcccgaa agacgtttaa tcacacaagg aaaccaaaaa atgaacatcc
     1261 aacttcaagg ccacatcgtc ggcgttaaaa aaatcaacgg acaaatcgaa ggcaagagct
     1321 tcgactattg ctgcctgatt gtcgccacac ccttagacag ctcccaaggc aacgcattgg
     1381 gcagctctac tactgaatac gatttcggcg gctctgccaa tttcgagcag ttccgaaacg
     1441 cccaatttcc gatcgaagca aacctgaacg tagaaatcgt cactacgggc aaaacccaaa
     1501 aactgaaagt catcggtttt caactcgtga agaaaggctg attgaatgca gaaagtctat
     1561 gttgtccagt ccgtatcaac aggggacttt ctgtatctct ctcctgaaac gggcgacatc
     1621 ggacatacca aattaatcac caatgccgat tatttctacg acttcgaaga agcgattaac
     1681 gcaggtttgg aagaaatcgg caaccaatac gaatttgtcg tattcggatt tttgaaagac
     1741 tgattttcgg atgttcggcg gtcgtctgaa aaacgctcca tccattaccg ccaaacactt
     1801 tttgaaggaa aatatcatga aatttattaa cacctgccgt aaatacggcg caaaactggc
     1861 tgttgtaaca gctgctcccc tggctttggc cgcacatgca aatgcaacgt tgcccgatac
     1921 ggcaaaaaac gctttggaag ccgcaaaagc ggacggtatg gaagccggtt ggattgtagt
     1981 gggcattttc gccgcgcttt ttgtattttc catcgttaag agagtgatga agtaagacgg
     2041 catgtactac caagtcggaa ataaatgtct tgagaagcac caggctgaaa acctttattt
     2101 cagcttggta gtaccaagaa tcaaagaaaa cggacagatt gtcaggccgg aatataacgg
     2161 cagcctgtgg aagatgtcgg acggtcagcc gctaaggctt ttattggcgg aatgcagtcc
     2221 gaaagacaac ctgcaaagcg gtcttgaaac aggctggata gtattcggca tcctcgcgtc
     2281 cgtttacttt gtttccctgc tgaaaaaggt tttgaaatga tggattttta tttttatctc
     2341 ggcgtttccg tacccgtatt aatcggggcg gttctgttta agaattgagc gcatgaagtt
//
LOCUS       DAXHRP010000217         2369 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.217, whole genome shotgun sequence.
ACCESSION   DAXHRP010000217 DAXHRP010000000
VERSION     DAXHRP010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.217"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            142..2022
                     /locus_tag="ACFM72_002034"
     CDS             142..2022
                     /locus_tag="ACFM72_002034"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease catalytic domain-containing
                     protein"
                     /protein_id="HFC6258537.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGIKRVGIHIAAPS
                     LAIKQGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAYRPSISIYFDVDSE
                     FNVGAPTCKIEAVNIAENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPDRAPQYDYSIELDEEGKVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTQSEPHIGMGVRHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          628 a          708 c          564 g          469 t
ORIGIN      
        1 aacgctgtac tggtttttgt taatccacta taacgcaagc accgcaaaga cgcgccaacc
       61 ctctcccaac cttttttcag acggcatttt cggtaatctg ctaaaatcgc ccgcttgagt
      121 ttccacagaa aaatccgaaa aatgaatatt ttttacgaag agtccggcca attcaaaatc
      181 gccgccatca tccaaaaaaa cgatgccacc taccaagtcg atacccaaca cggcaagcgc
      241 accaaagtga aggcaaacaa tgtctttgcc gagtttgacg gcgatatggc ggcgtttttg
      301 gaaaacgcgc aggcacaggc ggcggacatc gacaccgatt tattgtggga agtatgcggc
      361 gaagaggaat ttaccgccga agccatcgcc gaagaatatt acggccatgc gccgaccaaa
      421 accgagctgg cggcaacttt gattgcgctt tacgccgcgc cgatgtattt ctacaaaaaa
      481 gccaaaggcg tgttcaaagc cgcgcccgaa gaaactttaa aacaagcact tgccgccatc
      541 gaacgcaaaa aacagcaaga cgcgcaaatc gacgcttggg cggaagcctt gaaacgcggc
      601 gagatgccgt ctgaaatcgc ggcggatttg aaaaccatcc tgcacgcgcc cgacaagcag
      661 tcgctgacct acaaagcctt taccaaagcc gccgacgcgc tgaaaacctc tgcctacgaa
      721 ttggcgaaaa aaacgggcgg cattacgtcc attccccaat acctgcaaga cgggtttgaa
      781 atcaaatatt tccccaaagg aacaggcttc cccgaccttc cgcttcctga aatgcctgac
      841 ttacccaaag ccgacgttac cgccttttcc attgacgacg aatcgactac cgaagtggac
      901 gacgctttaa gcctgaccga tttgggcaat ggcataaaac gcgtcggcat ccacatcgcc
      961 gcgccgtcgc ttgccattaa acaaggcgac aaaatggaaa aaaacatcat ggaacgcttg
     1021 agcacggttt atttccccgg cggcaaaatc acgatgctgc ccgaaaactg gattgccgcg
     1081 ttcagccttg atgcaggtgc ataccgccct tccatcagca tttatttcga tgtggacagc
     1141 gagttcaacg tcggcgcgcc gacctgcaaa atcgaagccg tcaacatcgc cgaaaacctg
     1201 cgtatccaag ccatcgaacc gcatttcaac gccgaagcgg gcttggacga agcgggcgaa
     1261 atgatgttcg cccaccatca agacctgatt tggttttatc aattcgccat caccctgcaa
     1321 aaagcgcgcg gcaaatacga acccgaccgc gcgccgcaat acgattacag catcgaattg
     1381 gatgaggaag gcaaagtctc cgtcgtccgc cgcgaacgcg gttcgcccat cgatacgctg
     1441 gtcagcgaga tgatgattct tgccaacagc acttgggcgc aaatgctcca tgacaacgac
     1501 ctgcccggcc tcttccgcgt ccaacccacc ggaaaagtac gcatgagcac ccaatccgag
     1561 ccgcatatcg gcatgggcgt gcggcattac ggctggttta cctcgccgct gcgccgcgcc
     1621 gccgactaca tcaaccaaaa gcagctgatc agcctgatag acgacactgc cgagccgctg
     1681 tatcaaaaca gcgatgccga gcttttcgcc gcactgcgcg actttgatgc cgcctatacc
     1741 gcctacgccg acttccaacg ccaaatggaa gcctactgga gcctggttta cctgcaacag
     1801 caaggcacga gcgagctgac ggcgacgatt ctgaaagaag acctcgtccg catcgaaggt
     1861 ctgccgctag taacacgcgc gaccggtatt ccgtttgacg cgctgcccaa atcgcaggca
     1921 ttgttcaaaa tcaccgaatt agatgccgag aagcagtttg tctcgctcaa ctacatcaag
     1981 gcagtcgcac ccgcgggtac aacggcaggc aatgccgtct gaagcccgat acggcaaact
     2041 ccggcaaaaa cagaaacctg aatctcatca ttcccacagt cgggaatccg gttttttggg
     2101 tttccgttgt ttttccgttt caatgaactt ccaagccgcc gttcccgata aatacccgca
     2161 atctaaaatc ccgtcattcc cacgcagatg ggaatctagg tctgtccgca cgggaactta
     2221 tgcgccgtca ttcccgcgaa agcggaaatc cagaccgttc ggcttcagtt ttttggtttc
     2281 gggcaacttc tgaatcgtca ttcccgcgca ggtggaaata taggtctgtc cgcacgggaa
     2341 cttatacgcc gtcattcccg cgaaagcgg
//
LOCUS       DAXHRP010000218         2345 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.218, whole genome shotgun sequence.
ACCESSION   DAXHRP010000218 DAXHRP010000000
VERSION     DAXHRP010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.218"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            77..2227
                     /gene="yccS"
                     /locus_tag="ACFM72_002035"
     CDS             77..2227
                     /gene="yccS"
                     /locus_tag="ACFM72_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HFC6258538.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIITTVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGS
                     VDQQFRQLRHSDSPAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          545 a          907 c          476 g          417 t
ORIGIN      
        1 agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actatattca cttcataaca
       61 ataaaccggt aaaaccatga aaaccccact cctcaagcct ctgctcatta cctcgcttcc
      121 cgttttcgcc agtgttttta ccgccgcctc catcgtctgg cagctaggcg aacccaagct
      181 cgccatgccc ttcgtactcg gcatcatcgc cggcggcctt gtcgatttgg acaaccgcct
      241 gaccggacgg ctgaaaaaca tcatcaccac cgtcgccctg ttcaccctct cctcgctcac
      301 ggcacaaagt accctcggca cagggctgcc tttcatcctc gccatgaccc tgatgacctt
      361 cggctttacc attttaggcg cggtcgggct gaaataccgc accttcgcct tcggcgcact
      421 cgccgtcgcc acctacacca cacttaccta cacccccgaa acctactggc tgaccaaccc
      481 cttcatgatt ttatgcggca ccgtactgta cagcaccgcc atcatcctgt tccaaatcat
      541 cctgccccac cgccccgtcc aagaaagcgt cgccaacgcc tacgacgcac tcggtggcta
      601 cctcgaagcc aaagccgact tcttcgaccc cgatgaggca gcctggatag gcaaccgcca
      661 catcgacctc gccatgagca acaccggcgt catcaccgcc ttcaaccaat gccgttccgc
      721 cctgttttac cgccttcgcg gcaaacaccg ccacccgcgc accgccaaaa tgctgcgcta
      781 ctacttcgcc gcccaagaca tacacgaacg tatcagctcc gcccacgtcg actaccaaga
      841 gatgtccgaa aaattcaaaa acaccgacat catcttccgc atccaccgcc tgctcgaaat
      901 gcagggacaa gcctgccgca acaccgccca agccctgcgc gcaagcaaag actacgttta
      961 cagcaaacgc ctcggccgcg ccatcgaagg ctgccgccag tcgctgcgcc tcctttcaga
     1021 cagcaacgac aatcccgaca tccgccacct gcgccgcctt ctcgacaacc tcggcagcgt
     1081 cgaccagcag ttccgccaac tccgacacag cgactccccc gccgaaaacg accgcatggg
     1141 cgacacccgc atcgccgccc tcgaaaccgg cagcctcaaa aacacctggc aggcaatccg
     1201 tccgcagcta aacctcgaat caggcgtatt ccgccatgcc gtccgcctgt cccttgtcgt
     1261 tgccgccgcc tgcaccatcg tcgaagccct caacctcaac ctcggctact ggatactgct
     1321 gaccgccctt ttcgtctgcc agcctaacta caccgccacc aaaagccgcg tccgccagcg
     1381 cattgccggt accgtactcg gcgtaatcgt cggctcgctc gtcccctact ttaccccctc
     1441 cgtcgaaacc aaactctgga tcgtcatcgc cagtaccacc ctctttttca tgacccgcac
     1501 ctacaaatac agtttctcga catttttcat caccattcag gcactgacca gcctctccct
     1561 cgcaggtttg gacgtatacg ccgccatgcc cgtgcgcatc atcgacacca ttatcggcgc
     1621 atcccttgcc tgggcggcag tcagctacct gtggccagac tggaaatacc tcacgctcga
     1681 acgcaccgcc gcccttgccg tatgcagcaa cggtgcctat ctcgaaaaaa tcaccgaacg
     1741 cctcaaaagc ggcgaaaccg gcgacgacgt cgaataccgc gccacccgcc gccgcgccca
     1801 cgaacacacc gccgccctca gcagcaccct ttccgacatg agcagcgaac ccgcaaaatt
     1861 cgccgacagc ctgcaacccg gctttaccct gctcaaaacc ggctacgccc tgaccggcta
     1921 catctccgcc ctcggcgcat accgcagcga aatgcacgaa gaatgcagcc ccgactttac
     1981 cgcacagttc cacctcgccg ccgaacacac cgcccacatc ttccaacacc tgcccgaaac
     2041 cgaacccgac gactttcaga cagcactgga tacactgcgc ggcgaactcg acaccctccg
     2101 cacccacagc agcggaacac aaagccacat cctcctccaa cagctccaac tcatcgcccg
     2161 gcagctcgaa ccctactacc gcgcctaccg acaaattccg cacaggcagc cccaaaacgc
     2221 agcctgaaaa agtttcggca ttttgtaaga gagagcagat tgtcagatag gttgcaagat
     2281 agtggataaa gctttgcgca gggtaaatgc gtagcaactg aaccgtcatt cccacgaacc
     2341 tacat
//
LOCUS       DAXHRP010000219         2319 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.219, whole genome shotgun sequence.
ACCESSION   DAXHRP010000219 DAXHRP010000000
VERSION     DAXHRP010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.219"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>2319
                     /locus_tag="ACFM72_002036"
     CDS             <1..>2319
                     /locus_tag="ACFM72_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FrpA/C"
                     /protein_id="HFC6258539.1"
                     /translation="RLEKFDRVALQHFSQYVDLINENNGRLPNTSEIERSYYKAVTEN
                     GVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNAQAVNNPNGSEWDNRKQLISA
                     LDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIGGWGNGIINDLYKSVAKRE
                     WTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKETKKRNGKYHVYDPLALDLD
                     GDGIETVATKGFAGSLFDHTNNGIRTATGWVSADDGLLVRDLNGNGIIDNGAELFGDN
                     TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLE
                     ELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTDGTTAKMGDLLLAADNLHSRFKDKV
                     ELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKEAQLALLDNLIHKW
                     AETDSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQLKKNALVSLSDKAKAAIDAARD
                     RIAVLDAYTGQDSNTLYYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTRLQPYLNQ
                     ISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEGRRLMADY
                     VEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHNKNVSLYGNDGNDT
                     LIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTR
                     EGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRI"
BASE COUNT          706 a          489 c          540 g          584 t
ORIGIN      
        1 ccgtttagag aaatttgatc gggttgcatt gcaacatttc agccaatatg tagatctaat
       61 taatgaaaat aatggtagat tacctaacac tagtgaaatt gagagaagtt actataaagc
      121 cgttaccgaa aatggtgttt cttctagtgc agctattgat ttagttatta atcgctcact
      181 tccggatatg gcagatggtt attgggcatt aggtttgggg atagaagccg aacgtatcca
      241 caatgcgcaa gcagtaaata atccgaacgg tagcgaatgg gataatagaa agcagttaat
      301 atctgcttta gataaaggat ttgatggatc ttttaaagag aagcatttta cttttttaca
      361 atctgtgata atggatgtaa caaagttagg tgttgaatat acaatagatg gttggcaaaa
      421 aattggaggt tggggtaatg ggataatcaa tgatttatat aaaagtgttg caaaaagaga
      481 gtggactgga atatttgaga tcgttaataa taacatcaag caatttagag atctgttccc
      541 aaatccggaa ggctggatcg atgatggtca ccaatgtttc gctccttggg ttaaagaaac
      601 taaaaaacgc aatggcaaat atcatgtcta cgaccccctc gccctagatt tggacggaga
      661 cggtatagaa accgttgcca ccaaaggctt tgcaggcagc ttatttgatc acaccaacaa
      721 cggtatccgc accgccaccg gttgggtttc tgccgatgac ggtttactcg tccgcgattt
      781 gaacggcaac ggcatcatcg acaacggtgc ggaactcttc ggcgacaaca ccaaactggc
      841 agacggttct tttgccaaac acggctacgc ggctttggcc gaattggatt caaacggcga
      901 caacatcatc aacgcggcag acgccgcatt ccaaaccctg cgtgtatggc aggatctcaa
      961 ccaggacggc atttcccaag ctaatgaatt gcgtaccctt gaagaattgg gtatccaatc
     1021 tttggatctc gcctataaag atgtaaataa aaatctcggt aacggtaaca ctttggctca
     1081 gcaaggcagc tataccaaaa cagacggtac aaccgcaaaa atgggggatt tacttttagc
     1141 agccgacaat ctgcacagcc gcttcaaaga caaagtggaa ctcactgccg aacaggcaaa
     1201 agccgccaat cttgcgggca ttggtcgtct gcgcgatttg cgcgaagctg ccgcattgtc
     1261 cggcgatttg gccaatatgc tgaaagctta ttctgccgcc gaaactaaag aagcacagtt
     1321 ggcattgtta gataatttga ttcacaaatg ggcggaaacc gattcgaact ggggcaaaaa
     1381 atcgccaatg cgactttcaa ccgattggac gcaaacggct aatgaaggta ttgcactgac
     1441 accatcccaa gtagcacaac taaaaaagaa cgctttagtt tccctttctg ataaagctaa
     1501 agcagctatt gacgccgccc gcgaccgcat tgccgtgctt gatgcctaca cggggcagga
     1561 ttccaacaca ctctattaca tgagcgagga agatgcgctt aatatcgtca aagtaaccaa
     1621 cgatacatac gaccatctcg ccaaaaacat ctaccaaaac ctgttattcc aaacccgttt
     1681 gcagccatat ttgaatcaaa tcagtttcaa aatggaaaat gatacgttca ctttggattt
     1741 tagtggtctt gttcaagcat ttaaccatgt caaagaaact aatccgcaaa aagcttttgt
     1801 ggatttggcc gagatgcttg catatggcga acttcgttct tggtatgaag gccgaagact
     1861 aatggccgat tatgtggagg aggcaaaaaa agcaggtaaa tttgaagatt accagaaagt
     1921 gttgggtcag gagaccgttg cattattagc taaaacatcg ggtacgcaag cagatgatat
     1981 cctgcaaaat gtaggctttg gtcataataa aaatgtttct ttatatggta atgacggcaa
     2041 cgacactctg atcggcggtg caggcaatga ttacttggag ggcggcagcg gttcggatac
     2101 ttatgtcttc ggcgaaggct tcggtcagga tacggtctat aattacgact acgctaccgg
     2161 acgcaaagac atcatccgct ttaccgacgg tattacagcc gatatgctga cttttacccg
     2221 agagggcaac catcttctta tcaaggcaaa agacggcagt ggacaagtga ctgttcagtc
     2281 ctatttccag aacgatggct caggtgctta ccgtatcga
//
LOCUS       DAXHRP010000220         2310 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.220, whole genome shotgun sequence.
ACCESSION   DAXHRP010000220 DAXHRP010000000
VERSION     DAXHRP010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.220"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..567)
                     /locus_tag="ACFM72_002037"
     CDS             complement(<1..567)
                     /locus_tag="ACFM72_002037"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019957326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HFC6258540.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFSACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWNEVAK"
     gene            730..2136
                     /gene="dnaB"
                     /locus_tag="ACFM72_002038"
     CDS             730..2136
                     /gene="dnaB"
                     /locus_tag="ACFM72_002038"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HFC6258541.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVSTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          567 a          587 c          622 g          534 t
ORIGIN      
        1 tttggcgact tcgttccagt tgacgatttc ccaaaaacct ttcaggtagt tggggcggct
       61 gttgcggtag tcgatgtagt aggcgtgttc ccacacgtcg caggtcagca gcggcgtgtt
      121 ttcagtggtc agcggagttg ctgcgttgga agtggaaacc aaatccaatc cgccggcagg
      181 ggttttcacc agccacgccc aaccggagcc gaacgtaccg gcagcgcaag cggagaatgc
      241 ttcttggaat ttctcgaagc tgccccattt cgcgtcgatg gcggcggcca gttcaccgga
      301 aggtttgcct tgacctttgg gcgtgaaacc cagccagtag aaagtgtggt tccaagtttg
      361 ggctgcgttg ttgaacacgc cgcccgaaga ttttttcaca atctcttcca aaggcaggtt
      421 ttcaaattcg gtgcctttga tttgattgtt caggttggtg atgtaggttt gatggtgttt
      481 gccgtagtgg aattccaaag tctctttgct cagatgcggg gacaatgcgt ccagttcata
      541 aggcagttgc ggcagcttat gttccatttt gtgctcctaa tattgtttta aatgttgtat
      601 tttggcagtg ttgctgcaaa tagcttggca gcgcacatat tttacctgtt ttgaggaatg
      661 gaaaccaatt aaacctgctt tacgctataa tagaagattg caatttcggc acgacaaata
      721 ggatgtacca tgaacgatta cgcagccatg ccgtctgaag accgtgaggt cggcgcattg
      781 tcgcttccgc cgcactcaat ggaggcggaa caatccgttt tgggcgggtt gatgctggaa
      841 aatccggcat gggacaggat tgccgatgtg gtttcgggag aggatttcta ccggcatgaa
      901 caccgcctga ttttccgttc cattgccaaa ttaatcaatg agagccgtcc cgcagatgtg
      961 attacggttc aggaagattt gcagcggaac gaagaattgg aagcggcagg cggattcgaa
     1021 tacctgatta cgctggcgca aaacaccccg tctgccgcca acatccgccg ctacgccgaa
     1081 atcgtgcgcg agcgttccat tatgcgccaa ctcgccgaag tggggacgga aatcgcccgc
     1141 agcgcctaca atccgcaagg cagggacgcg gggcagcttt tggacgaggc ggaaaacaaa
     1201 gtattccaaa tcgccgaaag cacggccaaa tccaagcagg gctttttgga gatgcccgat
     1261 ttgctgaaag aagtcgtaca gcgcatcgat atgctctact cgcgcgacaa tcccgatgaa
     1321 gttaccggtg tgtcgacagg gttcatcgac ctcgacaaaa aaacctcggg tctgcaaccc
     1381 ggcgacctga ttatcgttgc cggtcgtccg tctatgggta agaccgcctt ttctatcaat
     1441 atcgccgaac acgttgccgt agaaggcaag ctgccggttg ccgtcttctc aatggagatg
     1501 ggcggtgcgc aactggtcat gcgtatgctc ggctcggtcg gacggttgga tcaaagcgtt
     1561 ttgaaaaccg gcaggctcga agacgaacac tggggtcgcc tgaacgaagc agtcgtcaaa
     1621 ctctccgacg cgcccgtgta catcgacgag accccgggtc tgaccgcgct cgaactgcgc
     1681 gcccgtgccc gccgtctcgc ccgtcaattt aacaataagc ttggattgat tgtcatcgac
     1741 tacctgcaac tgatggcagg atccggccgt tccgacaacc gagcttcgga gctgggagag
     1801 atttcacgtt cgctcaaagc gttggcgaaa gaattgcaag tccccatcat cgccctgtcg
     1861 caattgagcc gcacggtcga atcgcgtacc gacaaacgcc ccatgatgtc cgaccttcgc
     1921 gagtccggcg caatcgagca ggatgccgac ctgattatgt tcatgtaccg cgacgaatac
     1981 tacaaccagg actcacccat gaaaggcctt gccgaatgta tcatcggcaa acaccgcaac
     2041 ggtcccgtcg gtaaaatctt cctcacatgg acgggacaat tcaccaaatt cgacaatgct
     2101 gcctatattc ccgaggaggc aaagatagag gattaaatgg ctatataaaa atttattagg
     2161 cgaaatcagg caaaatcgtt taaaatcatg ctgagagatt gccctaaaaa ataaaacgcg
     2221 gtcttgaggc atttttgcat tcagcccgca tataattgaa aatatagtgg attaacaaaa
     2281 atcaggacaa ggcaacgaag ccgcagaccg
//
LOCUS       DAXHRP010000221         2284 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.221, whole genome shotgun sequence.
ACCESSION   DAXHRP010000221 DAXHRP010000000
VERSION     DAXHRP010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.221"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            19..747
                     /gene="rpe"
                     /locus_tag="ACFM72_002039"
     CDS             19..747
                     /gene="rpe"
                     /locus_tag="ACFM72_002039"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HFC6258542.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(770..1801)
                     /gene="ruvB"
                     /locus_tag="ACFM72_002040"
     CDS             complement(770..1801)
                     /gene="ruvB"
                     /locus_tag="ACFM72_002040"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HFC6258543.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1883..2191)
                     /locus_tag="ACFM72_002041"
     CDS             complement(1883..2191)
                     /locus_tag="ACFM72_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258544.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
BASE COUNT          455 a          544 c          738 g          547 t
ORIGIN      
        1 gatattgaag gaaaaaacat gactacttac cgtatcgcac ccagcatttt atcggcagac
       61 tttgcccgcc tcggagaaga ggtggaaagc gtcattgcgg caggtgcaga tctgatccat
      121 tttgacgtga tggacaacca ttatgtgccg aacctgacct tcggccctat ggtttgcgcg
      181 gcgttgaagc cttatgcaag cgtgccgatt gatgtgcatc tgatggtcga acccgttgac
      241 gacctgattc agtcgtttgc caaagcagga gcatcaatca tcacgttcca tcccgaggcg
      301 agccgccata tcgaccgcag cttgagcctg attcgtgata tgggctgtca ggcggggctg
      361 gtgttgaatc cggcaacgcc cgtatatctg ttggaaaacg tattggacag gctggatatg
      421 gttttgctga tgtcggtcaa ccccggattc ggcggacaaa gcttcatccc gcacaccctt
      481 gaaaaaatcc gccgggtgcg ggcgatgctg gatcggtacg aagcacaaag cgggcggcac
      541 atcgccatcg aagtggacgg cggcatcaaa accgacaata ttgccgccgt tgcccgagct
      601 ggtgcggata cctttgttgc cggttctgcg attttcggca aaccagacta taaggcggtg
      661 attgatgcga tgagggcgga actggaaaaa agcggcaggc tgaaccttgc gccaatgatt
      721 gaaatagaaa tgccgtctga aaattagctc tgtttcagac ggcattgcgt tatttttcga
      781 cgggcagccc gaaatgcagg taggcgcgtt cggtcgccat cctgccgcgc ggggtgcgtt
      841 gcaggaagcc ttgttggata aggtagggtt cgataacgtc ttcgatggtg tctgtagatt
      901 cgccgatggc ggcggcaaca ttgtccaaac cgaccgggcc gccgccgaat ttgtgcaaaa
      961 cggcttcgag aaatttcctg tccatcacgt ccagcccctg cgcgtccacg tccagcatac
     1021 ttaaagcggc atcggcgatg ccgccgtcga ttgtgccgtt gtttttcacg tcggcgaaat
     1081 cgcgcacgcg tcgcaacagg cggttggcga tgcgcggcgt accgcggctg cgtttggcga
     1141 tttcttccgc gccttcttcg gacatatcga gctgcaacag ttgtgccgaa cggctgacga
     1201 tggtggtaag gtctcggttt tcgtaaaact caaggcggga gacgatgccg aagcggtcgc
     1261 gcaacggatt ggtcagcata ccggcgcggg tggtcgcgcc gatgagcgtg aagggcggca
     1321 ggtcgatttt gacggaacgg gcggcgggtc cttcgcctat cataatgtcg agccggtagt
     1381 cttcgagcgc gggatagagg atttcttcga caacagggct gaggcggtgg atttcgtcga
     1441 tgaacaatac atcgtgcgga tcaaggttgg tcaaaagggc ggcgaggtcg cctgcgcgtt
     1501 cgaggacggg gccgctggtt tggcgcaaat ttacgcccaa ttctttggcg atgatgtgcg
     1561 ccagtgtggt tttgcccagt ccgggcgggc cgaagagcaa aacgtggtcg agtgcttcgc
     1621 cgcgtttttt ggcggcttgg atgaaaatgg caagctgttc tttggctttg tcttgcccga
     1681 tgtagtcgtc cagcgttttg gggcggaggg cgcgttcgag cagttcttcc tgtgcggagg
     1741 cggtttgggc ggcaacgatg cgttgcggtt gcgcggcggt caggttgtcg gtttgcagca
     1801 tagtgttccc tttgtcgggt atgccgtccg aacggtcggc ggcgtttcag acggcattga
     1861 aaagataacg gtcaaaagcg ttttatccgc gggtttcgcg ccaaacgaga tagtcgcgca
     1921 ggggcggcat aggcgggttg atgcagtggg ggcagatgcc ggtggtgtct tcgtcgtcgc
     1981 tgtcgatgtg gtaggcgttg gggtcgaagc ggatttgctg catgacggct tgcgccaatg
     2041 cctgcgcctg aacaacgtcg aaattgaatt tttcgaggat ttcgttcaac aggcggattt
     2101 cgccaccgct aaattccgca ctgtgtttga ggatgaggcg ttgataatct tcgttgttga
     2161 ttttaggcaa taaatcggtt ttcagggtca tgattttatg tcgggggcgg aatggctgaa
     2221 gcgtgaatta tagcggatat ggcggcggct gttgcaaagc ttggattggg tatcgtcctc
     2281 aaaa
//
LOCUS       DAXHRP010000222         2256 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.222, whole genome shotgun sequence.
ACCESSION   DAXHRP010000222 DAXHRP010000000
VERSION     DAXHRP010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.222"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..2020
                     /gene="pilC"
                     /locus_tag="ACFM72_002042"
     CDS             <1..2020
                     /gene="pilC"
                     /locus_tag="ACFM72_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC6258545.1"
                     /translation="STYPDSSSSQIFLQNLSRKDDTSKPGRYSLKPLSTSEIKSKEPN
                     FTGRQTIIRLDSGVREIKLDRSNEATGLNGNDGKNETFGIVSEGSFMPDDSEWKKVLL
                     PWTVRVFADDSKFKEFNKEEKDNKPKYSQKYRSRDTNNGNRNLGDIINSPIVAVGEYL
                     ATSANDGMVHIFKKGNGGDERNYSLKLSYIPGTMPRKDIQSQDSTLAKELRAFAEKGY
                     VGDRYGVDGGFVLREVERDGKTRVFMFGAMGFGGRGAYALDLTKADGSDPTAVSLFDV
                     KNGNNGKNSNNSNNSVQLGYTVGTPQIGKTHDGKYAAFLASGYATKDINSTENQTALY
                     VYDLESSGTLIKKIEVPNGKGGLSSPTLVDKDLDGMVDIAYAGDRGGNMYRFDLSGQD
                     PNQWSVRTIFSGNKPITSAPAISQLKDKRVVIFGTGSDLSEEDVLSTDEQHIYGIFDN
                     DTNTGTAQDGQGNGLLEQVLKKDGNTLFLSDYKRSNGSGDKGWVVKLEAGQRVTVKPT
                     VVLRTAFVTIRKYKDNGCGAETAILGINTADGGKLTKKSARPIVPEANTAVAQYSGHK
                     KTANGKSIPIGCMEKDGGTVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGID
                     PAGKRSGKNNRCFSQKGVRTLLMNDLDSLDITGPTCGMKRISWREVFY"
BASE COUNT          642 a          561 c          600 g          453 t
ORIGIN      
        1 ttctacctac cccgacagtt cgagcagcca aattttcctg caaaaccttt cccgcaagga
       61 tgacacaagc aaaccgggcc gctattccct caaacccttg agtacgtcgg agattaaaag
      121 taaagagccg aatttcacgg ggcggcaaac aatcatccga ttggatagcg gcgtacgtga
      181 gatcaaactg gatagaagca atgaggccac cggtttaaat ggaaatgacg gcaaaaacga
      241 aactttcggc attgttagtg aagggagctt catgcctgat gacagcgagt ggaaaaaagt
      301 gctgctgcct tggacggttc gggtttttgc tgatgacagt aaatttaaag aattcaacaa
      361 agaagaaaaa gacaacaagc caaaatacag tcaaaaatac cgcagccgcg acaccaacaa
      421 cggcaatcgc aatttgggcg acatcatcaa cagccccatc gtggcggtcg gcgaatatct
      481 agctacttcc gccaacgacg ggatggtgca tatcttcaaa aaaggcaacg gcggggacga
      541 gcgcaactat agtctgaagc tcagttatat cccgggcacg atgccgcgca aggatattca
      601 aagccaagac tccacccttg ccaaagagct gcgcgccttt gccgaaaaag gctatgtggg
      661 cgaccgctac ggcgtggacg gcggctttgt cttgcgcgaa gtcgaacggg acgggaaaac
      721 ccgcgtgttt atgttcggcg cgatgggttt tggcggcaga ggcgcgtatg ccttggattt
      781 gaccaaagcc gacggcagtg acccgaccgc cgtttccctg tttgatgtca aaaatggcaa
      841 taatggcaag aatagcaata atagcaataa tagcgtgcaa ttaggctaca ccgtcggcac
      901 gccgcaaatc ggcaaaaccc acgacggcaa atacgccgcc ttcctcgcct ctggttatgc
      961 gactaaagac attaacagca cagaaaatca aaccgcgctg tatgtatatg atttggaaag
     1021 cagcggcacg ctgattaaaa aaatcgaagt acccaacggc aagggcgggc tttcgtcccc
     1081 cacgctggtg gataaagatt tggacggcat ggtcgatatc gcctatgccg gcgatcgcgg
     1141 cgggaatatg taccgctttg atttgagcgg tcaagatcct aatcaatggt ctgtacgcac
     1201 cattttcagc ggcaacaaac cgattacttc cgcgcccgcc atttcccaac tgaaagacaa
     1261 acgcgtggtt atcttcggca cgggcagtga tttgagtgag gaggatgtac tcagtacgga
     1321 tgaacaacat atttacggta tttttgacaa tgacacaaac acgggtacgg cgcaagacgg
     1381 gcagggcaac gggctgctcg agcaagtgct gaaaaaagac ggcaatacgc tgttcttaag
     1441 cgactacaaa aggtctaacg gctcgggcga taagggctgg gtagtgaaat tggaagccgg
     1501 acagcgcgtt accgtcaaac cgaccgtggt attgcgtacc gcctttgtaa ccatccgcaa
     1561 atataaagac aacggctgcg gcgcggaaac cgccattttg ggcatcaata ccgccgacgg
     1621 cggcaagctg acgaagaaaa gcgcgcgccc gattgtgcca gaagccaata cggctgtcgc
     1681 gcaatattcc ggccataaga aaaccgccaa cggcaaatcc atccctatag gttgtatgga
     1741 aaaagacggg ggaaccgtct gcccgaacgg atatgtttac gacaaaccgg ttaatgtgcg
     1801 ttatctggat gaaaagaaaa cagacggatt ttcaacaacg gcagacggcg atgcgggcgg
     1861 cagcggtata gaccccgccg gcaagcgttc cggcaaaaac aaccgctgct tctcccaaaa
     1921 aggggtgcgc accctgctga tgaacgattt ggacagcttg gacattaccg gcccgacgtg
     1981 tggtatgaaa cgaatcagct ggcgtgaagt cttctactga tttgcacgcg aaaatgccgt
     2041 ccgaaaggtt ttcggacggc attttttgcg tttttcggga gggggcgggt tcgtaaaagg
     2101 cgggctatag ggtaggcttc atctcgccaa tctcactgaa tccatcaatt tccacaattc
     2161 aattaaatac cgtcaaaccg atgccgtcat tcccgcgcag gcgggaatct agacattcaa
     2221 tgctaaggca atttatcggg aatgactgaa actcaa
//
LOCUS       DAXHRP010000223         2194 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.223, whole genome shotgun sequence.
ACCESSION   DAXHRP010000223 DAXHRP010000000
VERSION     DAXHRP010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.223"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            39..523
                     /locus_tag="ACFM72_002043"
                     /pseudo
     CDS             39..523
                     /locus_tag="ACFM72_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            619..1242
                     /gene="rsmG"
                     /locus_tag="ACFM72_002044"
     CDS             619..1242
                     /gene="rsmG"
                     /locus_tag="ACFM72_002044"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HFC6258546.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQEEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            1341..2114
                     /locus_tag="ACFM72_002045"
     CDS             1341..2114
                     /locus_tag="ACFM72_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC6258547.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVEEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELAARVSGK"
BASE COUNT          429 a          500 c          761 g          504 t
ORIGIN      
        1 ctatataatg cggtctgctt cggaagaggg ggacggcgat gtttgtgaac gagaaatatc
       61 cttatgcggc tctgtttgcg ggactggtgt ttttgacgct gccgtttgcg ttggcggtgc
      121 atgatgcctt tgcgcttgcg ttcggacgga cggggttgct ggtgtcggtg tcggacggcg
      181 gattcggctg gcgtggcggt tgggacggca ctgtttggtt tgtgttcggt gtgtttgcgt
      241 ttttgaatgt ggttgtgtcg gcgggtctga cgaaactggc gtacaaaaag atgatgcggc
      301 ggcattcgcg ttacacactg tttctgtcgg gcgtggcggc ttgcgcggcg gcagcggtgg
      361 cttggatttt cgagctgctg cttggcagtg gggctttggg cgggctgcgg gggaggcggt
      421 gttggaatat gcgtttgccg tgtggctggt ggcgatgctg acgctgccca aacgcctgac
      481 gcgcgcgccg gtgcagccgg tggtgtttca caggaaaaaa taggttggaa cgggaaatgc
      541 cgtctgaaac ccgacacgcg gtttcagacg gcatgttttt ccgctaacat tacgcctgaa
      601 tatggacagg aagcagatat ggaacgcaaa gaacgcctgc gtgcaggcat tgccgcgatg
      661 gggctggata tttcggaaac ggcgcaggac aggcttttgg tctatgtgga tttgttgaaa
      721 aagtggaaca aaacctacaa tctgaccgcc ctgcgcgacg aggaaaaaat gattgtccat
      781 catcttttgg acagcctgac gctgctgccc catatcgagg gtgtgcaaac gatgctggat
      841 gtcggttcgg gcggcggtca gcccggcatt ccggcggcgg tgtgccgtcc ggatgtgcaa
      901 ataacccttt tggatgcgaa tacgaagaaa acggcttttt tacagcaggc ggttatcgag
      961 ttggggttgg acaatgtgcg cgtggtatcc ggacgcgtgg aggcggtttc ggacgtgcgt
     1021 gccgatgtgg ttaccagccg tgcgtttgca gaactggcgg attttgtgtc gtggacggtg
     1081 catctgttga aagacggcgg ctactgggcg gcgatgaagg gcgtgtatcc gcaggaagaa
     1141 atcggccgcc tgccgcagga tgtgtgcgtt gaaaaagtcc aaaggctcga cgtgccgggc
     1201 ttggatgcgg aacgccatat cgtcatcctg agcaagcgtt gagcgcactt cagacggcat
     1261 gaataccttt tttgtgcgga taaaggtaaa attccgcact gtttttcttt tttcaacatc
     1321 agacgggaca cgggcgggac atgagtgcga acatccttgc catcgccaat cagaagggcg
     1381 gtgtgggcaa aacgacgacg acggtaaatt tggcggcttc gctggcatcg cgcggcaaac
     1441 gcgtgctggt ggtcgatttg gatccgcagg gcaatgcgac gacgggcagc ggcatcgaca
     1501 aggcgggttt gcagtccggc gtttatcagg tcttattggg cgatgcggac gtgcagtcgg
     1561 cggcggtacg cagcaaagag ggcggatacg ctgtgttggg tgcgaaccgc gcgctggccg
     1621 gcgcggaaat cgaactggtg caggaaatcg cccgggaagt gcgtttgaaa aacgcgctca
     1681 aggcagtgga agaagattac gactttatcc tgatcgactg cccgccttcg ctgacgctgt
     1741 tgacgcttaa cgggctggtg gcggcgggcg gcgtgattgt gccgatgttg tgcgaatatt
     1801 acgcgctgga agggatttcc gatttgattg cgaccgtgcg caaaatccgt caggcggtca
     1861 atcccgattt ggacatcacg ggcatcgtgc gcacgatgta cgacagccgc agcaggctgg
     1921 ttgccgaagt cagcgaacag ttgcgcagcc atttcgggga tttgcttttt gaaaccgtca
     1981 tcccgcgcaa tatccgcctt gcggaagcgc cgagccacgg tatgccggtg atggcttacg
     2041 acgcgcaggc aaagggtacc aaggcgtatc ttgccttggc ggacgagctg gcggcgaggg
     2101 tgtcggggaa ataggtcaat ccaaatcggg ctgcccgtgc ctttatgctg tttggccggg
     2161 tgcgttatag tggattaaca aaaatcagga caag
//
LOCUS       DAXHRP010000224         2167 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.224, whole genome shotgun sequence.
ACCESSION   DAXHRP010000224 DAXHRP010000000
VERSION     DAXHRP010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.224"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..814)
                     /gene="cysW"
                     /locus_tag="ACFM72_002046"
     CDS             complement(<1..814)
                     /gene="cysW"
                     /locus_tag="ACFM72_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HFC6258548.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIIT"
     gene            complement(1192..2028)
                     /gene="cysT"
                     /locus_tag="ACFM72_002047"
     CDS             complement(1192..2028)
                     /gene="cysT"
                     /locus_tag="ACFM72_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HFC6258549.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
BASE COUNT          567 a          606 c          587 g          407 t
ORIGIN      
        1 tggtgatgat gttctgcacc gccagcgtcg ccagtgccaa aagtgccaat acgccggaga
       61 gggcgaatgc gccggtgaag ttgtattcgt tgtagaagat ttcgaccaaa agcgggacgg
      121 tgttggtttc gccgcgtatg tgtcccgata ccacgctgac cgcgccgaac tcgcccatcg
      181 cgcgggcgtt ggtgaggatg atgccgtaga gtaacgccca tttgatgttg ggcagggtaa
      241 cgcgccaaaa catctgccag ccgcttgcgc cgagtatcaa tgccgcctgt tcttcgctgt
      301 cgccctgagc ctgcatcagc gggatgattt cgcgcgcgac aaaggggaag gtaacgaaca
      361 gcgtcgccag aataatgccg gggatggcga agataatctg tatgccttgc gcttcgagcc
      421 agccacccaa tgccgtgtgc gcgccgaaca ataagacgaa cattaaaccg gccaccacgg
      481 gcgatacgga aaacggcaaa tcgagcaggg tagtcagcaa ctgcttgcct cggaagtcaa
      541 aacgggtcag cagccacgcc atcgccacac ccaatacagc attgacggga acgacaatca
      601 gcgcggtaat cagcgtcaat ttgatggcag accacgcttc gggatcgttt aaggatttta
      661 ggtacaaatc ccaaccgcct tttaaggctt cgtaaaacac ggcgacgagc ggcacgacca
      721 gcatcagcag cagaaagccc agcgcggcgg caatcagcaa cacgcgcagc cggcgcggtt
      781 cggtcaggtt gggattggcg gaatagggtt tcatggcggt ggtgttctct ggttggttta
      841 aaatgtttgg aggtcgtctg aaaagggatt gaggggtttc agacgacctt tttgttcatt
      901 aagtagtagg tcggatactt gtatccgaca aggttgctga atcgcaaatg tttgtcggat
      961 acaagtatcc gacctacgaa ttctgtgttt tggggagcgg attcgttttc agacgacctt
     1021 ttatctttta tgctaaaaga gaaataaaaa agtctagctg ccgtcattcc cgcgcaggcg
     1081 ggaatccacc acagggcaac aggaaaacag aaaataaata aggcagctga aattcaccaa
     1141 tggattcccg cctgcgtggg aatgacggta acaggtattt cagacgccgc ctcaaccctt
     1201 cgcgcccgaa cgcctgccca acgcccactg catcacgttc agcgcaaaca gaatcacaaa
     1261 cgaaaccagc agcataaaca acgccaccgc cgacgcgccc tgcacgtcga actgttccag
     1321 cttgcccgta ataatcagcg gtaggatttc ggaaaccatc ggaatgttgc ccgcgataaa
     1381 aatcaccgag ccgtattccc ccgttgcccg cgcgaacatc attcccgcgc cggtcaagag
     1441 tgccggcgtg atttccggca gcagcacgcg gcggaacgtc gtaaagcggt ttgcgcccaa
     1501 agtcgccgcc gcttcctcat attcgcccga taattcctcc aacaccggct gcacggcgcg
     1561 gacgataaag ggcaggctga cgacgaccag cgcaatccaa atgccgacgg gcgtaaacgc
     1621 gattttgatg cccaaaggct cgaaaaaacg gcctatccaa ccgttgggcg catacagggt
     1681 tgccaacgcg atacccgtaa ccgccgtcgg cagcgcaaac ggcaaatcga ccagcgcgtt
     1741 cgccagaccc ttgcccggga attcataacg caccaatacc cacgccacca gcgtgccgaa
     1801 cacgacattg gtcagcatcg cataaaacga catccgcaaa ctcagccaca ccgccgccaa
     1861 cacgttcggc tcggcaatcg tgttccaaaa gccgccccag ccgatttccg ccgccttcgc
     1921 cgccatcatc gcaaacggca agaccacaag cagcgacagg cacaatacgg tcagaccaag
     1981 gctgagtttg aagccgggca gtacgccggg cgttttgagc ggtaacataa aacaatgctg
     2041 aaaataagga aaaggaagga ctactttaac gatgccgtcc gaaaaacgga aagaatggaa
     2101 agtttggtgc aaagacgaat ttgttataaa gcggttggca gtttctcaag cgggcgcgat
     2161 gttttaa
//
LOCUS       DAXHRP010000225         2153 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.225, whole genome shotgun sequence.
ACCESSION   DAXHRP010000225 DAXHRP010000000
VERSION     DAXHRP010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.225"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            154..1539
                     /locus_tag="ACFM72_002048"
     CDS             154..1539
                     /locus_tag="ACFM72_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HFC6258550.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTTAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            1559..2077
                     /locus_tag="ACFM72_002049"
     CDS             1559..2077
                     /locus_tag="ACFM72_002049"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HFC6258551.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
BASE COUNT          455 a          651 c          576 g          471 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataaatc gttcaaataa acaggaatat aacttcagac
       61 aaacaactta ccgcccgatt tgtgctatcg ttttcgcaca acttaaaaaa acctgacaat
      121 tttgtacttt tattacagag aaaggcttta caaatggacg gctggacaca gacgctgtcc
      181 gcgcaaaccc tgttgggcat ttcggcggcg gcaatcatcc tcattctgat tttaatcgtc
      241 aaattccgca tccacgcgct gctgacactg gtcatcgtca gcctgctgac ggctttggca
      301 accggtttgc ccacaggcag cattgtcaac gacgtactgg tcaaaaactt cggcggcacg
      361 ctcggcggcg tggcgcttct ggtcggcctg ggcgcgatgc tcggacgtct ggtcgaaaca
      421 tccggcggcg cacagtcgct ggcggacgcg ctgatccgga tgttcggcga aaaacgcgca
      481 ccgttcgcgc tgggcgttgc ctcgctgatt ttcggcttcc cgattttctt cgatgccgga
      541 ctaatcgtca tgctgcccat cgtgttcgcc accgcacggc gcatgaaaca ggacgtactg
      601 cccttcgcgc ttgcctccat cggcgcattt tccgtcatgc acgtcttcct gccgccccat
      661 ccgggcccga ttgccgcttc cgaattttac ggcgcgaaca tcggccaagt tttgattttg
      721 ggtctgccga ccgccttcat cacatggtat ttcagcggct atatgctcgg caaagtgttg
      781 gggcgcacca tccatgttcc cgttcccgaa ctgctcagcg gcggcacgca agacaacgac
      841 ctgccgaaag aacctgccaa agcaggaacg gtcgtcgcca tcatgctgat tcccatgctg
      901 ctgattttcc tgaataccgg cgtatcggcc ctcatcagcg aaaaactcgt aagtgcggac
      961 gaaacctggg ttcagacggc aaaaataatc ggttcgacac cgatcgccct tctgatttcc
     1021 gtattggtcg cactgtttgt cttgggacgc aaacgcggcg aaagcggcag cgcgttggaa
     1081 aaaaccgtgg acggcgcact cgcccccgtc tgttccgtga ttctgattac cggcgcgggc
     1141 ggtatgttcg gcggcgtttt gcgcgcttcc ggcatcggca aggcactcgc cgacagcatg
     1201 gcggatttgg gcattcccgt ccttttgggc tgtttccttg tcgccttggc actgcgtatc
     1261 gcgcaaggtt cggcaaccgt cgccctgacc accaccgccg cgctgatggc tcctgccgtt
     1321 gccgccgccg gctttaccga ctggcagctc gcctgtatcg tattggcaac ggcggcaggt
     1381 tcggtcggtt gcagccactt caacgactcc ggcttctggc tggtcggccg cctcttggac
     1441 atggacgtac cgaccacgct gaaaacctgg acggtcaacc aaaccctcat cgcactcatc
     1501 ggctttgcct tgtccgcact gctgttcgcc atcgtctgac agacggaaag gatagtaaat
     1561 gactacgcat tttgtcgtta tgggcgtatg cggctgcggc aagaccaccg ccgcgctgtc
     1621 cctgcagaaa cacctcggtc aatgtcccta tgccgaaggc gacgagttcc acacccaagc
     1681 caaccgcgac aagatgggcg cgggtattcc gctgaccgat gaagaccgct atccgtggtt
     1741 gggcaatctg cgcgactgga tgacgaaaca ggcgcaaaac ggtgcgaacc acaccatcgt
     1801 aacctgttcc gccctcaaac gcggctaccg cgacattctg cgcggagccg aaggcaaagc
     1861 tgccttcatc cacctcagtc cgccgcaaga catcaacctc gagcgcatga tgtcgcgcaa
     1921 aggacattat atgaaagcag ggatgctcga ttcgcaactg gaaatcctcg aggaactggg
     1981 cgaaggcgaa tacggggtca aaatcgccaa ccccggcacg cccgaagcgg tcgaagccga
     2041 tattctgaac tgggttgcct cggaaaacct gctttgaagc aatatgccgt ctgaagcccg
     2101 acacaggatg ggtttcagac ggcataaaca tcgggaacag aatggattac att
//
LOCUS       DAXHRP010000226         2115 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.226, whole genome shotgun sequence.
ACCESSION   DAXHRP010000226 DAXHRP010000000
VERSION     DAXHRP010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.226"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(1..210)
                     /locus_tag="ACFM72_002050"
                     /pseudo
     CDS             complement(1..210)
                     /locus_tag="ACFM72_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            470..1942
                     /gene="pyk"
                     /locus_tag="ACFM72_002051"
     CDS             470..1942
                     /gene="pyk"
                     /locus_tag="ACFM72_002051"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HFC6258552.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENALIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          547 a          590 c          545 g          433 t
ORIGIN      
        1 aaataacttt catctgcttc tacttcgcca tcaaacattt ctaaatgtgg gctgttttga
       61 taaattaagt catcgtaaac gatgaaaata ataggctgcg gtatttttat taacgcctac
      121 taactctgct gctgttcttg cagttacacc tgcgacaaat agctcaatga gtttattttg
      181 tttataccgg cttagacgac tttttctcat agggataatt ctaacttaat ttgaatttcc
      241 ctagttatct aggacagccc caaaataaat ttagcctaag tcataaaacc gtgtaatttt
      301 gcgccaaaaa aggcggtttg caggtaaaat atcaaactat taatttaaat catattttta
      361 cagaatattc cgccgcgttc atcaaatgga catcaaaccg gttccaaatt tctgtaattt
      421 tgtaacaaaa taccgcaaaa cacccgattg agaccaaaag gactttcata tgaaccagac
      481 aagccgcgat ctgacccgca tcagccacaa cactaaaatc gtcgccaccc ttgggccggg
      541 cagcaacaac gtcgaactgt tggaagacat gatccgcgtc ggcggtctga acgtcgtccg
      601 cttcaacttc agccacggca cgcccgaatt ccatcaggaa aacgccctca tcgtgcgcga
      661 ggcggcaaaa cgcgccggac aggaaatcgc catcattgcc gacctgcagg gcccgaaaat
      721 ccgcgtgggc aaaatcgccg gcggcggcat cgaattgaac aaaggcgaaa cgctggtact
      781 ggatgccgcg ctcgaaggcg aaggcacgcg cgaggcggtc ggtttggact accgcgacct
      841 gcccgacgac gttgccgcag gcgatgtctt gtggctggac gacggcctgc tgaccctgac
      901 cgtggaatcc gtcgaaggca gcaggattat cacaagggtg gaaaacagcc acgtcctgaa
      961 aagcaacaag ggcatcaaca aacgcggtgg cggtctgtcc gcaggcgcgt tgaccgaaaa
     1021 agacttccgc gacctgaaaa ccgcgattgc catcggttgc gactacctcg ccatcagctt
     1081 tgtgaaatcc gccgaagatt tgcatatcgc gcgcgccaaa gtcgaagaag aaatgaaggg
     1141 cagcacggcc gtgcgccccg gtttggtttc caaaatcgaa cgcgtggaag cgattgaaaa
     1201 cttggacgaa atcatcctcg ccggcgacgg cattatggtt gcgcgcggcg acttggcggt
     1261 cgaagtcgga cacgccgccg tccccgccct gcaaaaacgg atgatccgcc gcgcccgcga
     1321 gttgcgccgc ttcagcatta cggcgacgca aatgatggaa tcgatgatta ccaaccccgt
     1381 accgacccgc gcggaagtca gcgatgtggc aaacgcggta ttggacggta ccgatgcggt
     1441 gatgtgttcc gccgaaaccg ccgtcggcgc gtatccgttt gaaaccgtca gccaaatggc
     1501 gattatctgc gcggctgcgg aaaaagagca ggattcgctc aacggcgttg ccgaacaggt
     1561 cgagtatccc gaagcggtca gcaccaacct agcggttgcc ggcggtgcgg tcagcgtggc
     1621 gcgcgcggtt cacgccaaag ccatcgtcgc cctgaccgaa agcggttcga ccgcctttga
     1681 aatcagccgc cacaacatca ccctgccgat tttcgcgctg accccgagcg tttccgccca
     1741 acgccgtatg gcgatgtacc ggggcgtgcg cccgctgatt ttggcaacca gtaccgacca
     1801 cgacacggcg ttaaacgaag tcgaaacgat gctggtggaa cacaacatcc tgcattccgg
     1861 cgaccaatac atcattacca gcggttcgca aatgcgcgaa tccggttcga ccaacacact
     1921 ggaagtgctg cgcgtcaaat aatccgccct gagtggaaaa tgccgtctga agccgatgcc
     1981 cgaggcttca gacggcattt tttgcggcgg cgcggcggtt cgggcaaact ctgaaaaaat
     2041 tgtgcaaatc cggcaacatc ggataaaatc gagtacctat actaaagcga aacaaggcat
     2101 ttccgactgc ctttt
//
LOCUS       DAXHRP010000227         2107 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.227, whole genome shotgun sequence.
ACCESSION   DAXHRP010000227 DAXHRP010000000
VERSION     DAXHRP010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.227"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            373..885
                     /locus_tag="ACFM72_002052"
     CDS             373..885
                     /locus_tag="ACFM72_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HFC6258553.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            965..2044
                     /gene="aroB"
                     /locus_tag="ACFM72_002053"
     CDS             965..2044
                     /gene="aroB"
                     /locus_tag="ACFM72_002053"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HFC6258554.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGALGDIGFFEWLEQHMPELMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          515 a          664 c          516 g          412 t
ORIGIN      
        1 ttcagcacct tagagaatcg ttctctttga gccaaggcga ggcaacgccg tactggtttt
       61 tgttaatcca ctatagtatt gataaacata ttatcttcaa tatattcaat tggataattg
      121 tttacctaag caaagataat tgccttttcc tgacaaataa gtgaaatcaa cggattgtca
      181 aaacacagcc tgaaataaaa aacctccctg atttctttta tttgtcctta aaatcagaaa
      241 ggttcgggat ggtcgggtta tttttccaaa cgtaccgccg ccctgccgat ttcgtataaa
      301 attccgccgt aacccgacaa gcccgaaccc tgtcgccccg aaaggcgggg tgtcaaacat
      361 taaggaattg tgatgaaaaa ctttaacggc aaactcatcc tcatcggact gatgggcgcg
      421 ggcaaaacca cgctgggccg gcaaatggcg cagcggctgg attaccgttt ttacgacagc
      481 gatcacgaaa tcgccgcagc cgccggcgtt cccatcccca ccatatttga aatggaaggc
      541 gaacagggat tccgttcgcg cgaaaccgcc atactcaaaa agctggttat cctgccccat
      601 atcgtcctgt ccaccggcgg cggcgcggtg ttaaaagaag aaaaccgcgc ccttatccgc
      661 aaaagcggca cggtcgtcta tctgcacgcc ccgcccgaaa ccctgctcga acgcacgcgc
      721 tgcgacaaca gccgtccttt gctgcaagtt gccgatcctt tggcgaaatt acgtgaactc
      781 tacgccgcac gcgaccccgt ttaccgccaa accgccgact ttaccgtaga atcggcaaac
      841 tgccgggaaa ccgtgcaaac cctgctcaaa cgcttatccc gataaaccgg catatgcgcc
      901 gcgcccagaa aaccaaaccg cgccccgccc ggcgggccgg cggttcaaac tttaaggaac
      961 aacaatgaaa acactgaccg tacacacccc gtcccacagc taccccatct ttatcggcaa
     1021 cggactgctg ccgcaggcag gaagcctgct caaaccgcat ttgggcaaac gcgccgccat
     1081 catcgccaac gaaaccgtcg ccccgctcta cctcggcacg cttcagacgg cattggatgc
     1141 ggcaggcgta tcccatttca gcatcatcct gcccgacggc gaggcgcaca aaaactggca
     1201 gacgctcaac ctcatctttg acgggctgat gcaaaaccgc gccgaacgca aaaccacatt
     1261 aatcgcactg ggcggcggcg tgatcggcga catggtcggc tttgccgctg ccacctacca
     1321 gcgcggcgca ccgttcgttc aaataccgac cacgctgttg agtcaggtcg actcatcggt
     1381 gggcggcaaa accgccatca accacccgct cggcaaaaat atgattggcg cgttttacca
     1441 gccgcaggcg gtgcttgccg acttggacac gctgcacacc ctgcccgccc gcgaattgtc
     1501 cgccggtatg gcggaagtca tcaaatacgg cgcgctcggc gacatcggct tttttgaatg
     1561 gctggaacag catatgcccg aactgatgac gctcgatcgg gaaaaactcg cccaagccgt
     1621 gtaccgctgc tgccaaatga aggcagacat cgtcgcccaa gacgaaaccg aacagggcat
     1681 acgcgcatgg ctcaacctcg gacacacctt cggacacgcc attgaaaccg agatgggtta
     1741 cggcacttgg ctgcatggag aagccatcgc cgccggctgc gtgttggcgg cgcgtttgtc
     1801 cgaacaactg ggcaaaacct ccgccgcaga taccgcgcgg ctcgccgccc tgctcgaagc
     1861 cgccggactg ccgtccgcgc cacccgtgtt tgcctttgaa aaatggctgg aacacatgag
     1921 ccacgataaa aaagtcagcg gcggcatcat gcgctttatc ggtctgaacc ggctgggcga
     1981 agccaacatc accgaaatta ccgacacgga catcctccgc cgcaccctgc aaccgtatct
     2041 ctgatttcct ctgccgatgt gctgccgcgc gggtttgacg cacgatgatg attttccatc
     2101 atctttc
//
LOCUS       DAXHRP010000228         2083 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.228, whole genome shotgun sequence.
ACCESSION   DAXHRP010000228 DAXHRP010000000
VERSION     DAXHRP010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.228"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            234..2016
                     /locus_tag="ACFM72_002054"
                     /pseudo
     CDS             234..2016
                     /locus_tag="ACFM72_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
BASE COUNT          649 a          508 c          519 g          407 t
ORIGIN      
        1 ccgccgtcat tcccgcaaaa gcgggaatcc agacccgtcg gcacggaaac ttaccgaata
       61 aaacagtttc cttagattcc acgtcctaga ttcccgcctt cgcgggaatg acgagatttt
      121 aagttggggg aatttatcag aaaaccccca acccccaaaa accgggcgga tgccgcacca
      181 tccgccccca aaccccgatt taaccattca aacaaaccaa aagaaaaaac aaaatgaaca
      241 aaatataccg catcatttgg aatagtgccc tcaatgcccg agctcacacg caaccacacc
      301 aaacgcgcct ccgcaaccgt ggagaccgcc gtattggcga cgctgttgtt tgcaacggtt
      361 caggcgaatg ctaccgatga agatgaagaa gaagagttag aacccgtagt acgctctgct
      421 ctggtgttgc aattcatgat cgataaagaa ggcaatggag aaaacgaatc tacaggaaat
      481 ataggttgga gtatatatta cgacaatcac aacactctac acggcgcaac cgttaccctc
      541 aaagccggcg acaacctgaa aatcaaacaa aacaccaata aaaacaccaa tgaaaacacc
      601 aatgacagta gcttcaccta ctcgctgaaa aaagacctca cagacctgac cagtgttgaa
      661 actgaaaaat tatcgtttgg cgcaaacggc aataaagtca acatcacaag cgacaccaaa
      721 ggcttgaatt tcgcgaaaga aacggctggg acgaacggcg acaccacggt tcatctgaac
      781 ggtattggtt cgactttgac cgatacgctg ctgaataccg gagcgaccac aaacgtaacc
      841 aacgacaacg ttaccgatga caagaaaaaa cgtgcggcaa gcgttaaaga cgtattaaac
      901 gcaggctgga acattaaagg cgttaaaccc ggtacaacag cttccgataa cgttgatttc
      961 gtccacactt acgacacagt cgagttcttg agcgcagata cgaaaacaac gactgttaat
     1021 gtggaaagca aagacaacgg caagagaacc gaagttaaaa tcggtgcgaa gacttctgtt
     1081 atcaaagaaa aagacggtaa gttggttact ggtaaaggca aaggcgagaa tggttcttct
     1141 acagacgaag gcgaaggctt agtgactgca aaagaagtga ttgatgcagt aaacaaggct
     1201 ggttggagaa tgaaaacaac aaccgctaat ggtcaaacag gtcaagctga caagtttgaa
     1261 accgttacat caggcacaaa tgtaaccttt gctagtggta aaggtacaac tgcgactgta
     1321 agtaaagatg atcaaggcaa catcactgtt aagtatgatg taaatgtcgg cgatgcccta
     1381 aacgtcaatc agctgcaaaa cagcggttgg aatttggatt ccaaagcggt tgcaggttct
     1441 tcgggcaaag tcatcagcgg caatgtttcg ccgagcaagg gaaagatgga tgaaaccgtc
     1501 aacattaatg ccggcaacaa catcgagatt acccgcaacg gtaaaaatat cgacatcgcc
     1561 acttcgatga ccccgcagtt ttccagcgtt tcgctcggcg cgggggcgga tgcgcccact
     1621 ttgagcgtgg atggggacgc attgaatgtc ggcagcaaga aggacaacaa acccgtccgc
     1681 attaccaatg tcgccccggg cgttaaagag ggggatgtta caaacgtcgc acaacttaaa
     1741 ggcgtggcgc aaaacttgaa caaccgcatc gacaatgtgg acggcaacgc gcgtgcgggc
     1801 atcgcccaag cgattgcaac cgcaggtctg gttcaggcgt atttgcccgg caagagtatg
     1861 atggcgatcg gcggcggcac ttatcgcggc gaagccggtt acgccatcgg ctactccagt
     1921 atttccgacg gcggaaattg gattatcaaa ggcacggctt ccggcaattc gcgcggccat
     1981 ttcggtgctt ccgcatctgt cggttatcag tggtaagggc tttttcgcct gtctgctgtt
     2041 ggggcaggcg gaaggtttga agggaagggt ggcgattttc cgc
//
LOCUS       DAXHRP010000229         1984 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.229, whole genome shotgun sequence.
ACCESSION   DAXHRP010000229 DAXHRP010000000
VERSION     DAXHRP010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.229"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            305..1762
                     /locus_tag="ACFM72_002055"
     CDS             305..1762
                     /locus_tag="ACFM72_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC6258555.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          451 a          592 c          456 g          485 t
ORIGIN      
        1 ctataatgcg cccttcggcg tggcggatat ataaggaagt gattttccat ctaagtaaaa
       61 accgccctat cggataagcc cttaacagaa aaggctttac ccgcgccgta tcggaacaca
      121 tcctctaaaa tacaatccgt tgaattgaaa aaaatataaa aacatccgcc cgcgaaaaac
      181 ggcagcgcgt cgtttgacaa agaatgaaaa tatcggttaa aaaccgattt tcatacaaaa
      241 aacaccgctg ccgtccgcat ccgtttcaga cggtattgag agaaaatctt ttaggagaac
      301 ctttatgtcc cggcatcccg cccccaccgg agaaaaaaca ttcttcggcc accccttcca
      361 gctttccacc ctcttccata tcgaattgtg ggaacgtttt tcattttacg gaatgcaggg
      421 catcctgctg atttacctct actacaccgc cgacaaaggc ggcttgggca tagacaaaac
      481 cctcgccggc ggcattgtcg gcgcatacag cggcagcgtg tacctgtcca ccattttggg
      541 ggcgtggttt gccgaccgag tatggggtgc ggaaaaaacc ctcttcctct cgggcatcgt
      601 cgtgatgctc ggacacatcg tccttgccgc cgccccgggc ctgtacggcc ttttaatcgg
      661 gctgatattc atcgcattgg gcagcggcgg cgtgaaatct acggccagtt ctatggtggg
      721 cgcattatac gaacaggacg aaatgcgccc gctgcgcgat gcgggatttt ccattttcta
      781 catcgccatc aacatcggcg gcttcctagg cccgctgctg accggcctac tgcaggaaaa
      841 catcggtttc cattatggtt tcggcgcggc ggcggtcggt atggcattcg gcttgtggcg
      901 ttattccctg ggacgtaaaa acctgcccca ccccaccgtc ccccatccgc tttcaaaagg
      961 acagggcaaa actgcggccg ccgtcggcat cgccctcatc gccgcacttg caaccgccat
     1021 caaaaccggg cttgtcaacc tcgacaattt ctccggcatc ctattatcta ccgtcatcct
     1081 tgccgtcatc gcctatttcg cccgcctgct gaccaacccc cgcgtcagtt ccgacaacaa
     1141 acggcacatc atcgcctaca tcccgctttt cctgaccatc tgtatgtttt gggccgtctg
     1201 gtttcagatt tacaccgtgg caaccgtcta tttcgacgaa accgtcaacc gcaccatcgg
     1261 ttcgtttacc gtgcccgtcg cttggaaaga ttctatgcaa agcctgtggg tcatcctgtt
     1321 ttccggactg atggcggcaa tgtggacaaa aatggggcgc aaacagccca aaaccccgct
     1381 gaaattcgct atggcggtat ttgttaccgg cgcgtcgttt ttgggattcg tcccctttat
     1441 ttcctccggt acgccgatgc ctattgcggt tttcgcactg atcgtcctcg ccatcacgat
     1501 aggcgaactg atgatttccc cgattgcgct gtccatctcc accaaaatcg caccgccttt
     1561 attcaaaacc caaatggtcg cccttaattt ccttgccttt tcattaggct tcactttggg
     1621 cggcgtattg tttgaaaaag gctatcaggc gggcgacgaa atcggcttct atcggctgct
     1681 gttctacatc ggcgcagcca caggcttcct gctgctcctg ctcgtcccca aattgaacaa
     1741 aatgctcgaa ggcacagact aagtcccgcc ccgatgccgt ctgaaccctt cagacggcat
     1801 ttttccgcat aatgaaacca aaccgtttcc acccgacagg acaggctccc gcccaaccgg
     1861 aaggcagcct gccgattgtc atttgaataa cgcaagggaa agccgttgat ttccgtttgt
     1921 atggaaacag tttggtttca ttggaaaaag gcattttgtc cgactaaatt agtgctgcat
     1981 caac
//
LOCUS       DAXHRP010000230         1889 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.230, whole genome shotgun sequence.
ACCESSION   DAXHRP010000230 DAXHRP010000000
VERSION     DAXHRP010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.230"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            385..1830
                     /gene="zwf"
                     /locus_tag="ACFM72_002056"
     CDS             385..1830
                     /gene="zwf"
                     /locus_tag="ACFM72_002056"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HFC6258556.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAARGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT          504 a          433 c          502 g          450 t
ORIGIN      
        1 tatctgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actatatttt
       61 aaaaggtatg ccgtctgaaa gtgggaagcg ggtgttatta tagtacaaaa tttgtaattt
      121 tgttacaaaa aaatcaggca ttgaaaagaa atttgattta aatcgcagaa tctttcgatt
      181 gttgtaacgg aataggggaa acctgcccga tttttggact aggtcaaata aattgtaaaa
      241 atgggaatag acaaaaagtg tagcggtgtg tagtattact actcattatg ccgcctgcct
      301 ttgtttccga tattgcgatg cagcgtgatg ggggaaacag gtttcagacg gcatcgaaaa
      361 attctttcct gacgagataa tacgatgagt acacaaacaa attttgattt ggtgttgttc
      421 ggtgcgaccg gcgatttggc gatgcgcaag ctgttgccct gtctgtacca ggcgcatgtt
      481 gccggtctgc ttcatcccga agggcgtatt ttgggggtca gccgcagcga gttggatacc
      541 gaaggttttc tggcgaaggt ggaaaccagt tccaaaatcc atgtgaaaga aaatttttcc
      601 gatgaggctt gggcatcgtt tgtcgaacgt ttcgcatatc tcaaagtcga tgttacgcag
      661 ccggacgatt ttgccgcttt gggcgatttg gtcaaagcgc gcaaagaaac cgacaatgtc
      721 gtcatctatc tttccaccgc gccgaaattc ttcgcgcaaa catgtgaaaa ccttgccaaa
      781 atcggtttga acgccgacaa cgtgcgtgtg gttttggaaa aaccgttggg tacggatttg
      841 gcttcttccc agcaaatcaa taccgatgtt gcgcgttatt tcaaagaagg gcaaatttac
      901 cgcatcgacc actaccttgg caaagaaagc ctgcaaaacc tgcttgcgct gcgttttgcc
      961 aatgtaatgt tcgagccgct gtggaacaat aaatacatcg aaagcgtgca gttgaccatc
     1021 gccgagcagt tgggcgtgga agagcgcggc gagttttatg acattaccgg cgcgttgcgc
     1081 gatatggtgc aaaaccattt gatgcagatg ctgtgcatga ctgcgatgga agcccccgcc
     1141 agcttggatg ccgacgcggt gcgcgatgaa aaagtcaaag tcatcaagtc attgaagccg
     1201 ctgaccgtcg agtctgtcaa tgaaaacgtc gtgcgcggac aatataccgc cgccagaggc
     1261 atgaacggct atcttgaaga aatcaacgtt ccgcaagaca gctttaccga aacctacgtc
     1321 gccattaaag ccgaaatcga aaacgaacgc tggaagggcg ttcccttcta cctgcgtacc
     1381 ggcaaacgca tggcgggcaa agtggcggaa atcgttttga acttcaaaga tttgaacagc
     1441 catatttttg aaggcagccg caccgcgccc aaccggctcg ttatcgagtt gcaaccatat
     1501 gaatccgtgc gcctctatac gcagatgaaa accccggggg caggaaataa ggtcgaaacc
     1561 gtgccgctgg caaccgattt gggcaaagca ttggaaagcc gccgcgcgga agcttacgag
     1621 cgcctgctgc tggatgtgat taacggcaaa ctcgctttgt ttaaccgccg cgacgaactc
     1681 gaagccgcgt gggaatatgt gatgccgatt ttggaaaact ggacaaataa caccacgccg
     1741 ccgcacggct acggcgcaca ctcgtggggg cctgaagccg cgcgcgaact attggcgcgc
     1801 gacggacaca agtggcacga agagcagtaa tacaataatg cgttcagacg gcatggggtt
     1861 tgaaatgccg tctgaacgta agtaaagca
//
LOCUS       DAXHRP010000231         1884 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.231, whole genome shotgun sequence.
ACCESSION   DAXHRP010000231 DAXHRP010000000
VERSION     DAXHRP010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.231"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(127..1437)
                     /locus_tag="ACFM72_002057"
     CDS             complement(127..1437)
                     /locus_tag="ACFM72_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HFC6258557.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1689..>1884
                     /locus_tag="ACFM72_002058"
     CDS             1689..>1884
                     /locus_tag="ACFM72_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258558.1"
                     /translation="MIQSALCFEAEAHEYTNIQEMEWVSLFSDPQKDDDSLITLKDEK
                     ITVKNYIVPWWKKGENFRKLE"
BASE COUNT          448 a          484 c          497 g          455 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc
      121 attgcttcat tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagcc
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcatcag cttggtcggg gcgttgcgca ggtggacggg
      361 cacttcgtcg ctggcgtttt ctttgacgaa gtggcgcatt tggttgtatg ccttgtagcc
      421 cgcgttggat ttggcggcgg cagcaaggta cagcacggct tgagccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt ggaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcggtta agtttttcag
      781 acgacgtgta tcggcggcgc gtaaaagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattcacga gtaatttttg cgcatccgtt tcaatcgtaa actcttggta
      901 ttcaggcaaa gccaatacct tggcaatcag ctttttcagg tcgtctgaag acaagggttg
      961 caaaacatac acctgcgcgc ggctcaacag cgcgggattg acttcaaacg acggattttc
     1021 cgtcgtcgca ccaataaagg ttagcaaacc gctttcgaca tgcggcaaaa acgcgtcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgcgc gtccctgctg
     1141 caaagcgatt tcggctttat cgattgcctc gcggatgtcc ttcacgccgg aaaatacggc
     1201 ggaaacaggc aaaaactggg cgttgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccgcctt ctaccgccac
     1321 gcgcaaaggt ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcaccggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aaaagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 gtgaaaactt tagaaaatta gaac
//
LOCUS       DAXHRP010000232         1838 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.232, whole genome shotgun sequence.
ACCESSION   DAXHRP010000232 DAXHRP010000000
VERSION     DAXHRP010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.232"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(351..1037)
                     /locus_tag="ACFM72_002059"
     CDS             complement(351..1037)
                     /locus_tag="ACFM72_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HFC6258559.1"
                     /translation="MYAFTDAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYIFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(1114..1587)
                     /gene="queF"
                     /locus_tag="ACFM72_002060"
     CDS             complement(1114..1587)
                     /gene="queF"
                     /locus_tag="ACFM72_002060"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HFC6258560.1"
                     /translation="MSRNTEELQGISLLGNQKTQYPIGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     regulatory      complement(1591..1635)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT          486 a          376 c          528 g          448 t
ORIGIN      
        1 aagtttgaac cggcgacgaa aacaatgccg tctgaaaatc tgtaaacagg ttttcagacg
       61 gcatttgcag ttgattaaaa taaaattaag ccaaggaagc actgctgtca ttcctgtacc
      121 ggcgggaatc cggacaccac ggcacggaaa cccatccgcc gtcattcccg cgaaagcggg
      181 aatctagaaa tacaacgcgg caggagttta tcggaaatga ctgaaaccca acgcaccgga
      241 ttcccgcttt cgcgggaatg acgaagtagg taggaatccg gatttatccg ttccgacagt
      301 gtttgcaaat aaaagaaaac ccaaccgtcc cgattcccgg cagggctgtg ttacggattt
      361 tgcagcgagg gcgcggggcg gtcttgcgcc tgtttggttt gcagggtcgt cagttttttc
      421 gtcagcagat tcagaatcac gccgtaggcg ggcaggaaaa acagaccgca gacggtaagt
      481 ttgaacaggt aatcgacaaa agcgatgccc tgccagtttg ccgccataaa ttcatcgctg
      541 ctggcgtaaa aggcaacggc aaaaaacact aacgtgtcca gtgcattgcc gatgacggtt
      601 gatgcggtcg gtgcaatcca ccacgctttc agacgacgta atttgttgaa cacaaaaata
      661 tcaaggattt gtccgagcgc gtaggcggca aagctggcca aggcgatgcg tccgacaaag
      721 gtgttgaatt cggatagtgc gcccaagcct gtccaactgc cgttgtggaa caaaacggaa
      781 aagatgtagg aaagcaaaag ggcggggaac atcacccaaa agataatccg ccgtgccaag
      841 tgcgaaccga aaatgcggac ggtcaggtcg gtggcaagga agatgaaggg aaaggaaaat
      901 gcgccccaag tggtgtggat gccgaaaatt tggaagggga actgcaccag atagttgctg
      961 gcggcgatga tgaggatatg aaaaagcacc agccagaaga gtgccttctg ttgctgtgcg
     1021 tcggtaaatg cgtacataaa aaaacctttc ggaaaggcgt tcagacggca tatcgtatcg
     1081 aaggaatgcc gtctgaaata tgggaaggat ggtttattgt gcgtcgtgct caaacaggcg
     1141 tttacgcgcc aatgcttcaa actcggtgcc tgctttgccg taattggcaa acggatgaat
     1201 ggcgatgccg ccgcgcggtg tgaactcgcc gaatacttcg atgtatttcg gatccatcag
     1261 ggcaatgagg tctttcatga tgatgttgac gcagtcttca tgaaaatcgc cgtggttgcg
     1321 gaagctgaag aggtagagtt tcagggattt gctttccacc attttgatgt gcggaatgta
     1381 gcggatatag atggtggcga agtcgggctg cccggtcatg gggcagaggc tggtgaactc
     1441 ggggcagacg aatttgacga aatagtcgtt gtcgggatgt ttgttgtcga atgcttcgag
     1501 aatttcaggc gcgtagccga tcggatattg ggttttttga ttacccaaaa gcgagatgcc
     1561 ttgcagctct tcggtattgc gggacatagg gtttccttag ttttttagtg tgggaggttt
     1621 tcgaaccacg gggcggcgat tgtaatataa gcggcggtat ctgtgtagtt ttcttcagtt
     1681 agtatgggta attgctttac tcggtgatgt gtggatataa atagttctgt gaggccgggc
     1741 tgatacagtt tatttgaata ttcattctaa atcattaact tgattgagtt attgccaggg
     1801 tatagaatcc taaccaatct ttaattggtt ttatttat
//
LOCUS       DAXHRP010000233         1768 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.233, whole genome shotgun sequence.
ACCESSION   DAXHRP010000233 DAXHRP010000000
VERSION     DAXHRP010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.233"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(55..378)
                     /locus_tag="ACFM72_002061"
     CDS             complement(55..378)
                     /locus_tag="ACFM72_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC6258561.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(366..605)
                     /locus_tag="ACFM72_002062"
     CDS             complement(366..605)
                     /locus_tag="ACFM72_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HFC6258562.1"
                     /translation="MILNIRKMGNSQGVILPKSLLSQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(728..1525)
                     /gene="truA"
                     /locus_tag="ACFM72_002063"
     CDS             complement(728..1525)
                     /gene="truA"
                     /locus_tag="ACFM72_002063"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HFC6258563.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGVPTVQTALETALAQI
                     AGEFVATTVAGRTDTGVHATAQVVHFDTAAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESVPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSSGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          404 a          409 c          502 g          453 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataatga acacaatcaa ttcagactat tcaatcaggc
       61 aaacatctcc tgcaatactg caaacagttt ttcagccgta ctgttgtcta aatttccaag
      121 atgtttgacc aatccggctt tatccacagc cctaatctgt tcgggcaaaa gcaaaccgtc
      181 tttatcctga aagcggacat tgacgcggaa cggggcagga cggcttccgc tcgtcatggg
      241 aacgatcagc acagtcttga gatagttgtg tatttcagga ggagagacta cgacacaagg
      301 acgtgtcttt ttgatttcgc ttcctacggt cgggtctaag gagaccagat agattccgcc
      361 gcgtactacc atatccattc tttatccgct tcgttttcaa tttcggaaaa aaaatgctcc
      421 tgctcggttt cgacaagcat tgcggcagct tctgcccatc ccctgcgaac ggtaggacag
      481 cttaaaataa tattgccctt ttcaactgta acagccaagc tgtccactgc ccctatttga
      541 ctcaataatg atttgggcag aatcacgcct tgcgagtttc ccattttgcg tatgttgaga
      601 atcatatacg taccatattt accagtttat gtaataacaa tgttattacc ttgatgagat
      661 agtgtcaaca ttgaaaaaga ttgcctgaca gtttgtccga tttcaaaatc tccgcgacaa
      721 gaatgtttta aagccattcg gggatttggg ggcggatgat gccgtatgcc tcgggatagt
      781 cgacgccggt caggtaaagt ccgtcgggca tgaaggtcgg cggggctttg aggcggctgc
      841 gttcttgaat cagtgcggcg aagccttcga cgctgagtct gccgctgccg acatagacga
      901 gcgcgcccat gatgttgcgt accatatggt gcaaaaaggc gttgccgtgc aaatcgaggc
      961 ggacgagtcc tgagctttgg gtaaggtcgg cgcggtagat ggttttgacg ggggattttg
     1021 cttggcattc ggcggcgcgg aagctggaga agtcttgttc gccgatcaaa taggcggcag
     1081 cccgacgcat cggttcgatg tcgagtttga ggtgtgtcca gcctgccctg tttttgagca
     1141 ggggggaacg gacggggacg gattcgagca ggtagcggta atgccgtccg tatgcgtcaa
     1201 atcgtgcatg aaattcgggg gcgacctgtc gggcgtgcaa aacggcaatg ccttcgggca
     1261 ggtgggcatt tacgccgcgc acccatgcct gttggggacg ggcggcggca gtatcaaaat
     1321 gaacgacttg ggcggtggcg tgcacgccgg tatcggttct gccggcaacg gtggtggcga
     1381 caaattctcc tgcgatttgg gcgagtgcgg tttccaatgc cgtctgaacg gtcggtacgc
     1441 cgcccgcctg tttctgccag ccgtaaaagc ggctgccgtc ataggatagg gttattgccc
     1501 agcgttgttt ttgtgcggta tccatcggat ttgggattcg gataaatgtt cagactgcat
     1561 tgtatcgcag attttgcagg gaaacggcaa acgcccaggg cgagcggcgt tgtttgggga
     1621 gttgttgggg ggggatgcag ttgctacgaa tcgctatcct gtgaatttac cctgtcagga
     1681 gtgcccgaat cgtcattccc gcgcagtcgg gaatctagga cgtaaaatct aaagaaacca
     1741 ttttatagtg gattaacaaa aaccagta
//
LOCUS       DAXHRP010000234         1740 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.234, whole genome shotgun sequence.
ACCESSION   DAXHRP010000234 DAXHRP010000000
VERSION     DAXHRP010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.234"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            30..917
                     /gene="prmA"
                     /locus_tag="ACFM72_002064"
     CDS             30..917
                     /gene="prmA"
                     /locus_tag="ACFM72_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HFC6258564.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTATQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEVPEGSAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVRAGKDNAAQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            935..1498
                     /gene="orn"
                     /locus_tag="ACFM72_002065"
     CDS             935..1498
                     /gene="orn"
                     /locus_tag="ACFM72_002065"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HFC6258565.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDDVLNKMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            1509..>1740
                     /locus_tag="ACFM72_002066"
     CDS             1509..>1740
                     /locus_tag="ACFM72_002066"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258566.1"
                     /translation="MPSETQFAFQTAFLQQIEIKNIHARHSRTGGNPEGRACRYFQSL
                     QKLKGLDSRLRGNDGRVHSYSGLTKIRTRRRSR"
BASE COUNT          460 a          533 c          444 g          303 t
ORIGIN      
        1 aatccactat atttccaaga aagcccgtta tgccctacca acaaatcacc gtcaacgtca
       61 acgatgccgt cgccgaacgc ctcgccgacg cgctgatgga acacggcgca ctctccgccg
      121 ccatcgaaga tgcctacgcc ggcacgcaaa acgaacaggc gattttcggc gaacccggta
      181 tgcccgccga acaaatctgg cagcagagca aagtcatcgc cctgttcggc gaacacgacg
      241 aagccgccgc catcatccaa accgccacac aagaatgcgg gttaaaagac ttggcataca
      301 ccggcgaaac catcgaagac caagactggg tgcgtctcac gcaatcgcaa ttcgacccca
      361 tccggatttc cgaccgcctg tggattaccc cctcttggca cgaagtcccc gaaggcagtg
      421 ccgtcaacct ccgcctcgac cccggactcg ccttcggcac cggcagccac ccgaccacgc
      481 gcctctgcct caaatggttg gatacgcaac tcaaaaacgg cgaaagcgtc ctcgactacg
      541 gctgcggttc gggcatcctg accatcgccg ccctcaaact cggtgcaggt ttcgccgtcg
      601 gcgtggatat tgacgaacag gccgtccgcg ccggcaagga caacgccgcg caaaacaacg
      661 tcgatgcaca attcttcctg cccgacggtc tgcctcaagg gcaattcgac gtagttgtcg
      721 ccaacatcct cgccaaccct ttgcgtatgc ttggcgaaat gctcgccgcc cgcaccaaac
      781 agggcggacg catcgtgttg tccggtttgt tggacgaaca ggccgaagaa ctcggcggca
      841 tttacagcca atggttcgac ctcgacccgg cggaaaccga ggaaggatgg gcgcgattga
      901 gcggcgtaaa acgctgaaac ggaaaggaaa caccgtgcag gataaaaaca acctctgctg
      961 gctcgatatg gaaatgacgg ggctgaatcc cgaaaccgac cgcattatcg aagtcgcgat
     1021 gattattacc gactcggatt tgaatgtgtt ggcgcaatcc gaagtttacg ccgtccacca
     1081 aagcgacgac gtgctgaaca aaatggacga atggaacacc gccacacacg gcaggacggg
     1141 gctgacacag cgcgtacgcg aatcgtcgca taccgaagcc gaagtcgaac agaaactgct
     1201 ggactttatg tcggaatggg tacccggacg cgccacgccg atgtgcggca actccatcca
     1261 ccaagaccgg cgttttatgg tcaaatatat gccgaaactg gaaaactact tccactaccg
     1321 caacctcgac gtttccacgc tgaaagaact cgccaaacgc tggaatccgc ccgttgccaa
     1381 aagcgtcgtc aaacgcggtt cgcacaaggc attggacgac attttggaga gcatcgaaga
     1441 aatgcgccac taccgcgaac actttctgat ttccgccccg agagccgaag cgcaataaga
     1501 aacaaacaat gccgtctgaa acgcagtttg catttcagac ggcattttta cagcagattg
     1561 aaatcaaaaa tatacacgcc cgtcattccc gcacaggcgg gaatccggaa ggtcgggcct
     1621 gccgttattt tcaatcatta cagaaactga aaggtctgga ttcccgcctg cgcgggaatg
     1681 acgggcgtgt gcattcttat agtggattaa caaaaatcag gacaaggcga cgaagccgca
//
LOCUS       DAXHRP010000235         1724 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.235, whole genome shotgun sequence.
ACCESSION   DAXHRP010000235 DAXHRP010000000
VERSION     DAXHRP010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.235"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(55..834)
                     /locus_tag="ACFM72_002067"
     CDS             complement(55..834)
                     /locus_tag="ACFM72_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HFC6258567.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
     gene            1337..1724
                     /locus_tag="ACFM72_002068"
                     /pseudo
     CDS             1337..1724
                     /locus_tag="ACFM72_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
BASE COUNT          436 a          521 c          351 g          416 t
ORIGIN      
        1 aatttagttc actataccga tacatccgaa tatgccagac cgtctaaacg gtattcatac
       61 ctcccaatcc tgcacgcgct tcaaatcgtt ttgcgccaaa gtatccgcgt ggcggttacg
      121 gctctgatat tccctgtctt tcatgatgct gcttgccaca taattcaaat gtgcctttgc
      181 cgcctccgaa gcctcgcccg gccgacggtt cgatatcgcc tcatacagca cgcggtgctg
      241 cgccatcagt ttcggacgcg gatcttcttc ctgattcaga taaataaggc tgctgcgcgt
      301 ctgccggtac agcattttca acaaaccgcc cgacaaatgg ctgaacaaca aattgtgcgc
      361 cgcatccgca atcgtctgat ggaagctgac atcggcttcg ctctgatgtt ccagattgcc
      421 gctttcgcac gcctcctcaa acttttcaag ccaaaaccca atccgcttca aatcggcatc
      481 cgtccggcgt tctgccgcca atgccgccat acagccctcg atgtggcagc tgaaatcaaa
      541 aacatcctgt tcccaattgg aatgcttgcc caaaagctcc tgccaacttt gcaaaaaatc
      601 ctgctgcggc ttgaccgaaa cataataacc gtctccctgc ctcgcttcca aaacctgacg
      661 ggcaaccaaa acattcaatg ccgaccggac cgacgggcgc gaaacgccga actcttccgc
      721 caaaacgcgt tcgggcggaa tcttgccccc ttccgcgtaa accccttccg caatgcgctc
      781 ctccaatacc gacaatacct gatcgctgat tttctgaggc cttaccagtt tcatcactcc
      841 tcctttataa agattccctg cagaaccctt ccgaaatata gtggattaac aaaaatcagg
      901 acaaggtgac gaagccgcag acagtacaaa tagtacagaa ccgattcact tggtgcttca
      961 gcaccttaaa gaatcgttct ctttgagcta aggcgaggca acgccgtact ggtttttgtt
     1021 catccactat acatcaaaca tcaaattgga ctgaccaatc agggcggatt ctaatgacac
     1081 gccgttcccg ccgtcaacgg catttacctc gcaccgcccc cgaaacacaa gaaaaaacta
     1141 caccaaacta caatttttgt tcatgcaaat atttgttttg acaggattta aacgaaagct
     1201 ccgattcaaa tctgccgaac cgcccaaaaa tatattgacc taaatattaa agtttcgtaa
     1261 agtaatgcaa cgttgcttta attggtttga ccactattgc cgacgattag aaaaatattt
     1321 tcggagatgt tcaattatgg aaacttgggt tcaaaactac acggcaatcg gcggcagcct
     1381 gtatctgact gccgccgccg cactcttacc catcgtcttt ttctttgccg cgctgaccgt
     1441 cctgaagctg aaaggctatc aggcggggct ttatacgctg ctgattgcgc ttgccgttgc
     1501 cgtattcggc ttcgggatgc cggcggtatg gcggtttctt ccctgccgcc gcagccgcac
     1561 tgacccaacg cccctacgcc acgctggatt tgaccgcgca ttacaaaatc ggcaaatcca
     1621 cccgcatcgg tttggacttt gaaaacgtgt tcaacaaacg ctaccgccct atgcccgaca
     1681 ttcacgttta cggcacgccg cgcagcctga ccgcaaccgt caaa
//
LOCUS       DAXHRP010000236         1720 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.236, whole genome shotgun sequence.
ACCESSION   DAXHRP010000236 DAXHRP010000000
VERSION     DAXHRP010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.236"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(47..1330)
                     /gene="hemL"
                     /locus_tag="ACFM72_002069"
     CDS             complement(47..1330)
                     /gene="hemL"
                     /locus_tag="ACFM72_002069"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HFC6258568.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKYGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIQREGFYENLTARTEQLVQG
                     FRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIEGFKQFFHGMLDRNVAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAE"
     gene            complement(1394..>1720)
                     /locus_tag="ACFM72_002070"
     CDS             complement(1394..>1720)
                     /locus_tag="ACFM72_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFC6258569.1"
                     /translation="TEEGIAQTVVKGKTTRAEVEARFGRQNPFGCYAYHEVSLPIYNF
                     LPTNFIYMKSERRHWEWCVDYDEEGVVRDYRFTHKVGKDERSVIRDTVDVIRKEAGKS
                     LSQPEK"
BASE COUNT          382 a          499 c          461 g          378 t
ORIGIN      
        1 caatctgcca aacagatcga acagagaaac cctgtccgtc aaaacatcat tcagccatcg
       61 ccttgaacac ttcaaccgca accgcaaccg tttcgtcaat cagctcgggc gtatgcgcgg
      121 cggaaacgaa acctgcttca taagcggacg ggccgaaggc gacattgcgg tcgagcatcc
      181 cgtggaaaaa ctgtttgaag ccttcaatat tggaacgcgc catatcggca tagtttcgcg
      241 gcgcgtgtgc ggcgaaatac agaccgaaca taccgcccac gctgtcggcg gtgaactcga
      301 tgcccgccgc atccgctgcc gtccgaaaac cttgaaccaa ctgttcggta cgcgccgtca
      361 ggttttcata gaagccttcg cgctggatga tttccagcgt tttcaagcct gcggcgacag
      421 caatcgggtt gcccgacaag gtgcctgcct gatacacgcc gcccagcggg gaaatacatt
      481 ccataatgtc tttgcgcccg ccaaacgcgg caagcggcat accgccgccg atgactttgc
      541 ccatcgtggt caggtcgggc gtgatgccgt gcaaagattg cgcgccgccg agcgcgacgc
      601 ggaagccggt catcacttcg tcgtaaatca acaccgcgcc gtatttttcg gtcaattcgc
      661 gcagggcttt gacgaaggct tcagacggcc taaccagatt catattgccg acaaaaggct
      721 ccaaaatcac acaggcaatg tcattgccgc tttgagcaaa ggcttcttcc aattgggcga
      781 tgttgttgta ctcaaggact aaagtgtgtt tggtaaagtc ggcaggcaca ccggcggaag
      841 agggattacc gaacgtcagc aggccgctgc cggctttcac cagcaggctg tcggaatgcc
      901 cgtggtagca gccttcaaac ttgatgattt tgtcgcgacc ggtaaaaccg cgtgccaaac
      961 ggatggcggt catcgtcgct tcggtaccgg agctgacgag gcgcagccgt tcgacggacg
     1021 gcatgatttt ggcgatttgt tcggcaatgg cgatttcgcc ctcggtgggc gcgccgaacg
     1081 acaaaccgcc caacgcggct tcgcgcacgg cttcgacgac ttcggggtgc gcgtgtccga
     1141 caatcgcagg cccccaagag ccgacatagt cggtataacg cgtgccgttt tcgtcccaaa
     1201 catacgcgcc ttcggctttt ttgatgaagc gcggcacgcc gccgacgctg ccgaatgcgc
     1261 ggacggggga attcacgccg ccggggatga tggctttggc gcggtcgaat aaaatttcgt
     1321 tacggttcat atttatcctc aaatgccgtc tgaacggcag gtttcgggct tagaagcaga
     1381 aagtcccatt ttatcatttt tcaggttgcg acaaggattt gcccgcttct ttgcggatga
     1441 cgtcaaccgt atcccggatg acggaacgct cgtcttttcc cactttatgt gtaaagcggt
     1501 agtcccggac aactccctcc tcgtcgtaat ccacacacca ctcccaatgc cggcgttctg
     1561 atttcatata aatgaaattg gtcggtaaaa aattataaat cggcaggctg acttcatgat
     1621 aggcataaca accgaacgga ttttgccgcc cgaaacgtgc ctctacctcc gcccgggtcg
     1681 ttttgccttt aacaaccgtt tgtgcgattc cctcttccgt
//
LOCUS       DAXHRP010000237         1719 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.237, whole genome shotgun sequence.
ACCESSION   DAXHRP010000237 DAXHRP010000000
VERSION     DAXHRP010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.237"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            343..1647
                     /locus_tag="ACFM72_002071"
     CDS             343..1647
                     /locus_tag="ACFM72_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HFC6258570.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDATAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGVVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          351 a          432 c          509 g          427 t
ORIGIN      
        1 caattaaaaa tttttaatat attaatcaat aaattaattt tataaaataa aaatattgtc
       61 aacaatattt tgccttatcg cccaaacctc tgtatatttt cctacagtaa attgttgaca
      121 atccatacgc ccacatatgc gccgcctaag gataaatcct cccgccggac aacgggtgca
      181 agggatcgga tgcgatattt ccatattcaa acaagggatt ggcggcacat cggcaaaatc
      241 cccgcgccgc cccggtccgg cagggcttgc gtccctcccg gacaagcccc gaccccgcct
      301 ttccgaaaga cgggctcaac cattaaggaa actttagtca aaatgaaaaa acacatatgg
      361 gcggcatctt tgctgccggc atccctatcg gcagaacctt taaactggtg gaagccttat
      421 tccgccgtca attcgggcga taccgcctgg gtgatgactg cggctgcctt ggtactgttg
      481 atgacgcttc ccgggctggc tttattctac ggcggtatgg tgcggaaaaa aaacctgctc
      541 tcgacgatga tgcacagctt ttccatcgcg acattggtgg gcatcctttg ggtcgccgtc
      601 ggctattctt tagcgttcac gccgggaaat gcctttatcg gcggtttggg gcgcgtattt
      661 ttaagcggga tgcagataga cgctaccgca cagatgctga ccgtgtcgcc caatgcgccg
      721 actgttcccg aaccggtatt tatgtttttt cagatgacgt ttgccattat ttcgaccgcc
      781 attattaccg gcgcgtttgc cgaacggatg aaatattcgg caatgatgct gttttcgggc
      841 atatggtttt tattggttta tgtgccgggc gcgcattggg tgtggggcgg cggctttatg
      901 agcaagggcg gcgtattgga ttatgccggc ggtacggtgg tgcacatcaa tgccggtatc
      961 gcgggactcg tcgccgcctt ggttttgggc aggcgcatag gctacgggcg cgaggcgatg
     1021 cctccgcaca atatggcgat gacactgatc ggcgcggcaa tgttgtggtt cggctggttc
     1081 ggctttaacg ccggatcggc gcttgcggca gacgcggcgg cgggtatggc gatggcggta
     1141 acgcaggtgt cggccgtatt cggcgcggca ggctggcttg cctgcgaaaa aatagcggga
     1201 cacaaacctt ccgctttggg gctggcttcc ggcgcggttt ccggtctggt cggcatcacc
     1261 cctgccgccg gctttaccgg cccgtcgggc gcggccgcca tcggtatatt gactgccgcc
     1321 gcgtgctttg tgtccgtcac cgtcgtcaaa cacaaattgc gttacgatga ttctttggac
     1381 gctttcggca tacacggatt cggcgggctg gtgggcggaa tattgaccgg catctttttc
     1441 gacaaccgca ttttcggcgg ggatgcggca gtttggcagc agttgtggat acaggtaaaa
     1501 gacggggtcg ttatggcggc atacagcggg ctaatgagtt gggcgatttt gaaggtcgtg
     1561 gggaaaatct gcggcggcct gcgcgtcggc aaggatgtcg aacgcgaagg tttggatctg
     1621 aatatccacg gcgaacgcgt ggaataaggg cggctatgcc gtctgaagcc tgaaaatcgg
     1681 gtttcagacg gcatttttca cgtttgccgc cgatggata
//
LOCUS       DAXHRP010000238         1673 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.238, whole genome shotgun sequence.
ACCESSION   DAXHRP010000238 DAXHRP010000000
VERSION     DAXHRP010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.238"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(195..1355)
                     /locus_tag="ACFM72_002072"
     CDS             complement(195..1355)
                     /locus_tag="ACFM72_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HFC6258571.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNYQLQLTEQP
                     SKAQGQTNNQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGG
                     GATQWGNRESFVGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDD
                     MPVSVRYDSPDFSGFSGSVQFVPAQNSKSAYTPAYVDEQSKYHAAVVGKPGSDVYYAG
                     LNYKNGGFAGNYAFKYARHANVGRDAFELFLLGSGSDQAKGTDPLKNHQVHRLTGGYE
                     EGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGKKG
                     ENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          426 a          432 c          388 g          427 t
ORIGIN      
        1 tatatgtgca aaccaagccg aaaatgcgaa ataccgtctg aaaatctttc agacggtatt
       61 tgctgtcttt attgccgttt ttcttccgta tccggatttt tgtttggggc tgaagcagat
      121 tggcagtcag attgcaatca aagaatgaag gcgagccgtc aaaaacaaag ctatccgctt
      181 caccgccccg atatttagaa tttgtggcgc aaaccgacgg aggcggcatt aatttgagtg
      241 tagttgccga tgccggtatt gcgtttcagc caagcgccag acacgatggc ggaagtgcgt
      301 ttggaaaaat cataatcaac gccggcgatg atttgatcgt agctggtatt ttcgcctttt
      361 ttaccgcgtt cgataaagtc gaaaccatgg gcatagctga tgcgcggaac tgcattaccg
      421 aagcggtagg aagcagtggc ggcaatttcg gtcgtactgt ttttggtttt gtcggcattt
      481 tcagacaaat ccaactgggc cgccaaggcg agattcaagc cgccttcctc atagccgccc
      541 gtcaggcggt gtacctgatg gtttttcaag ggatcggtac ctttggcttg atcactcccg
      601 ctgccgagca agaacaactc aaaagcatca cgtccgacat tggcgtgtct cgcatattta
      661 aaggcatagt tcccggcaaa accgccattt ttataattca gaccggcata atacacatcc
      721 gatccgggct tgccgacaac agccgcatga tacttactct gctcatccac ataagccggc
      781 gtataggcgg acttgctgtt ttgagccgga acgaattgga cgctgccgct gaaaccggaa
      841 aagtccggag agtcgtagcg tacggaaacc ggcatatcgt cgtggcgttt gaaaataccc
      901 aattgcgaag ccacatcatt gttgctgtcc caaggatcaa tggcttggct ggcatcgtca
      961 aactgatttg caacgcgacc ggcgcgcagc gtaccgaatt cgcctgccaa gccgacaaag
     1021 gattccctgt tgccccactg ggtcgcgccg ccgccggcaa cggatacgtc ttgctcaagc
     1081 tgccaaacag ccttcagccc ttcgcccaaa tcctcgctcc ccttaaagcc gataaacgag
     1141 ccgaaatcgc tgattttcgt cctgatgcgg ctttttgcct tagtaacttt tacctgattg
     1201 ttcgtttgac cttgagcctt tgagggctgc tcggtcaatt gcagctggta gttcctgcct
     1261 tccacgccgg ctttgatttc gccgtacagg ctgacatcgg caacggccgc aagcggcagt
     1321 gcggacaata cgagggcagt aagttttttt cgcatatcgg cttccttttg taaatttgat
     1381 aaaaacctaa aaacatcggg caaacacccg atacgtcttc aattataccc ccccccccgc
     1441 aaaaaaccat ttttcagaac aaatatctga taaatgccgc aacctttatt ttaaaaatga
     1501 ttatattttg atataaaaca ataacttatt ttttcaaaaa acgttgtgtt tctacaacac
     1561 aattcaagcg cagacctcgt gcgggccgat gcgctgctgc ccggatgcag tctcggcttt
     1621 ttaaaacgcc ataaaaaaac acacgcggca ctttatagtg gattaacaaa aac
//
LOCUS       DAXHRP010000239         1649 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.239, whole genome shotgun sequence.
ACCESSION   DAXHRP010000239 DAXHRP010000000
VERSION     DAXHRP010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.239"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            161..1099
                     /locus_tag="ACFM72_002073"
     CDS             161..1099
                     /locus_tag="ACFM72_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HFC6258572.1"
                     /translation="MGHNMMTTQKWYEHITDVIIDTTQRFNREKSADSIEYINERKGS
                     PIGAICVVSIDVYAACSHAYLFEHNLKKFKQYAYAYSKLEILASMGWSDPTPFFFPCD
                     MLNIQNPMFLMLMSDSPQLREFLVRNIDNIANDTEAFINRYDLNRHMIYNTLLMVEGK
                     QLDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARM
                     AAKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLIVYDPLPADEYQDIFD
                     FMKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            1096..1329
                     /locus_tag="ACFM72_002074"
     CDS             1096..1329
                     /locus_tag="ACFM72_002074"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258573.1"
                     /translation="MSRKTLSSCFIDYNFRMNEDWIRQVITNLPDNHPTKNILREAVR
                     SGKIKTAVTGVDRQTGKAVILPVKVPSKANIRR"
     gene            1332..>1649
                     /locus_tag="ACFM72_002075"
     CDS             1332..>1649
                     /locus_tag="ACFM72_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HFC6258574.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCLDSIDYVDERKGVP
                     LAAMEHIFMDVRAAASHAYLFEHDLNKFKQYAYVAGKLGVLLSVNAEDPEPFFFPCDM
                     LNIQ"
BASE COUNT          509 a          353 c          342 g          445 t
ORIGIN      
        1 ttactaactt accagataat catcccacta aaaacatcct tcgagaagca gtacgttcgg
       61 gtaaaatcaa aactgcggtt actggagtag atcgtcaaac aggtaaagca gttattcttc
      121 ctgtcaaagt tccttctaaa accaatataa ggagataaca atggggcaca atatgatgac
      181 cacccaaaaa tggtatgaac atattacaga tgtgattata gacaccactc aaagatttaa
      241 tagagagaaa agcgctgata gcatagagta tattaatgaa agaaagggat ctccaattgg
      301 agcgatctgt gtcgtttcta tagatgttta tgcggcatgc tcacatgctt atctgtttga
      361 acacaacctt aaaaagttca aacagtatgc ttatgcttac agtaaacttg agatactggc
      421 aagtatggga tggtctgacc ccacgccttt cttctttccc tgtgacatgc tcaacattca
      481 aaatccgatg tttctgatgc tgatgagcga cagcccacag ctgcgcgagt ttctggtgcg
      541 caatatcgac aacatcgcca acgatacaga agcctttata aaccgctacg acctcaaccg
      601 tcatatgatt tacaatactc tgctgatggt agagggtaag cagcttgatc ggttgaaaca
      661 acgtagcgag aaagtcttgg cgcatcccac ccctagcaaa tggctgcaaa agcggttgta
      721 cgattaccgc ttcttcctcg ctttcgccga acaggatgcc gaggcgatga aggccgcctt
      781 agagccgctt ttcgataaaa aaactgcgcg tatggctgcc aaagaaacat tgtcctattt
      841 cgatttctac ctgcagccgc aaatcgttac ctatgccaaa atcgcatcca tgcacggttt
      901 cgatttgggc atagaccacg aaatcgcacc gagggatttg attgtttacg atccgctgcc
      961 ggcagacgaa tatcaagaca tcttcgattt tatgaaacag tatgacttgt cttacccgta
     1021 tgaatatctg caggattgga tagattacta tacgttcaaa accgataagc tggtatttgg
     1081 taacgcgaag cgagagtgag ccgtaaaact ctgagctcct gttttataga ttacaacttt
     1141 aggatgaatg aggattggat tagacaagtt attactaact taccagataa tcatcccact
     1201 aaaaacatcc ttcgagaagc agtacgttcg ggtaaaatca aaactgcggt tactggagta
     1261 gatcgtcaaa caggtaaggc cgttattctt cctgttaaag ttccttctaa agccaatata
     1321 aggagataac aatggggcac aatatgatga ccacccaaaa atggtatgag catattacta
     1381 atgtaatcat aggcaatact gctaatttca atagcggttg ccttgactct atagattatg
     1441 tagatgaaag aaaaggcgtt ccgcttgcag ctatggaaca tattttcatg gacgttagag
     1501 ctgcagcttc ccatgcctat ctatttgaac atgatcttaa taaattcaag caatatgctt
     1561 atgttgcagg aaagctgggg gttttgctga gtgtaaatgc cgaagacccc gaacccttct
     1621 tctttccctg tgacatgctc aacattcaa
//
LOCUS       DAXHRP010000240         1643 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.240, whole genome shotgun sequence.
ACCESSION   DAXHRP010000240 DAXHRP010000000
VERSION     DAXHRP010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.240"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(433..1356)
                     /gene="lpxC"
                     /locus_tag="ACFM72_002076"
     CDS             complement(433..1356)
                     /gene="lpxC"
                     /locus_tag="ACFM72_002076"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HFC6258575.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          439 a          407 c          396 g          401 t
ORIGIN      
        1 agaccttaga ataacagcaa tattcaaaga ttatctgaaa gtccgggatt ctagattccc
       61 actttcgtgg gaatgacggc atcagtctgc cgtttacagc acggtttctt tagattttac
      121 gttctagatt cccgcctgcg cgggaatgac gaatccatcc atacgaaaac ctgcaccacg
      181 tcattcccac gaacctacat cccgtcattc ccacaaaaac agaaacctca aatcccgtca
      241 ttcccgcgca ggcgggaatc cagacttgtc ggtgcggacg cttatcggat aaaacggttt
      301 cttgagattc cgcgtcctgg attcccactt tcgcgggaat gacgaatttt aggtttctgt
      361 tttggttttt tgtccttgta ggaatgatga aaatttaagt tttaggaatt taccggaaaa
      421 aaatagaaag cgttatccac aagttctgat gttcagctcg tgaaatgcgt cgggcaaatc
      481 atcgctgtcg gcaaattcca cccggtcgta agccgtttcg tctgccaaaa ccgcgcgcaa
      541 gagtgcgttg ttgatggcgt gtcccgattt gtagccttca aatgcgccga caatcggatg
      601 tccgacgata tacaaatcac cgatggcatc aaggattttg tggcgcacaa actcatcggg
      661 atagcgcaag ccttcaggat tcaggacatc cgtgtcgtca atcacgatgg cgttgttcaa
      721 attgccgccc aaacccagat tgtgggcgcg catcatttcc acttcgtgca taaagccgaa
      781 agtgcgcgcg cgcgcgattt cgtcgatgta ggatttgccg gcgaaatcga tttcaaaagt
      841 gggcgagctg cggttgaaaa ccggatggtc gaattcgatg gtcagcgtta ccttaaagcc
      901 gtcatacggc gtaaagcgca cccatttgcc cgcttctttg atttcgacag gcttgaggat
      961 tttcaaaaaa cgcttttgcg ccttttgatc gaccacgccc gcatcttgca aaaggtaaat
     1021 aaacggcagg ctggagccgt ccataatcgg gatttcgggc gcgttcagct caatcagcgc
     1081 gttgtcgata ccgtaggcgg acagcgcgga cataatgtgt tcgatcgtgc cgacgcgcac
     1141 gcctttgtcg gtaacgatgg tggaggaaag gcgggtatcg ttgatcaaat aaggggtcag
     1201 tttgatttgt tcgcccatct cgccgtccaa atcggtacgg cggaaggaaa tcccgctgtt
     1261 ttcaggcgcg gggtgcaggg tcagtgcgac ccgttcgccg gaatgcagcc cgactccggt
     1321 aacgctgatg gatttcgcca aagttctttg cagcataaac cgctccctta tcaatggggt
     1381 aagttttgga ataatacgat aaaaccggaa aaacaggcta tgtttttcca tagtatttgc
     1441 caatgtatcc gttttcaata cgtaagccgc ataaaaatgt atagtggatt aacaaaaatc
     1501 aagacaaggc gacgaagccg cccctcccga aaaacgcaaa aaatgccgtc cgaaaacctt
     1561 tcggacagca ttttcgcgtg aaccgtcatt cccacaagga caaaaaacca aaacataaaa
     1621 ccaaaaacag aaacctaaaa ttc
//
LOCUS       DAXHRP010000241         1624 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.241, whole genome shotgun sequence.
ACCESSION   DAXHRP010000241 DAXHRP010000000
VERSION     DAXHRP010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.241"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(20..682)
                     /locus_tag="ACFM72_002077"
     CDS             complement(20..682)
                     /locus_tag="ACFM72_002077"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC6258576.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(695..1522)
                     /locus_tag="ACFM72_002078"
     CDS             complement(695..1522)
                     /locus_tag="ACFM72_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HFC6258577.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPITLFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT          306 a          433 c          500 g          385 t
ORIGIN      
        1 tttgtggggc ggatattttt cagggctgta ttttgtccag acattcgagc agatcgagtg
       61 gcgtgcggat gtggaaatcc gcctgccatg agccggtatc gtcttcggga gcgatgtagc
      121 cccattcggc gaggacggtt ttcatgccgg cgttgcggcc tgcttggatg tcgcgttcgg
      181 catcaccgac gtagagtgtg tgttgcgggt cggcgtggat ttgtccgcac gcatacagca
      241 tgggtttgat gctgggcttg ggttcgccgc aggtgtcgcc gctgacgacg acggcgggtg
      301 ggatgatgaa gccgagtttg gggacgagtt tgtcggtgaa gcgcatgggt ttgttggtga
      361 tgatgcccca tttgatgccg cgttggttga gttcggcaat gagttcgttc acgccgtcaa
      421 agagctcggt gtcttgggcg tagcggcggt cgtattcctc cagatattcg gtgcgccatc
      481 gggcatagtc ggggtggtcg ggggtgatgc ctgcgccgag tttgatcagt cctgccgcgc
      541 cgtggctggc ttgggtgcgg atctcgtcca tgctttttgc aggtagtccg tggcgagcga
      601 gcagggtgtt gagtgcgcct ccgaggtcga gggcggtgtc ggcaagtgtg ccgtcgaggt
      661 cgaagagtac ggcgtgtatc atgtgtgttc cttttcagac ggtatttttg ttctgtttca
      721 aaccctgctc gaaatcttcc agcatatcca attcaaagcg gctgaagccc gctttttcgc
      781 gcgcttcgat gttcacatag ccgcggaaga taaacatatc gtaacgggca atcagactgc
      841 ggaacagggt aatcggttcc aaaccgcgtt cgcggcagag gtgttgatac caatggttgc
      901 cgatggcgac atgacccact tcgtcgcggt aaatgatgtc caatacgccg caggtttccg
      961 aatcgccgcg ctgcgccacc ttcgcgcgta tccccggcgt aacgtccagc ccgcgcgctt
     1021 ccaacacgcg cggtaccaac gccatacgca acagcgggtc gtaggcggtt ttgtacgcca
     1081 tatcccacaa atggttgtgc gcctcgaaac tgccgtaatc gaagccgaaa gcgcgcaatc
     1141 tgtcgcgcat caggcggaaa tggtacacct cttccttcgc cactttcacc cagtcgcgga
     1201 caaactgaaa cggcagcgtg cggaaacggt atgccgcgtc caaagctaga ttgacggcgt
     1261 tgaattcgat atgcgcaatc gcgtgcagca tcgccgcata accttcggtt gtgttcattt
     1321 tgcgcggggt cagttgcgac ggcgcgacca aaacaggctt gtccggccgt cccgctcggg
     1381 ggaagtccgc cggcggcgcg tttgcttccg ccccgtccgc attttgaacg gcggcaaacg
     1441 cctcatccgt cagccgtcct ttttcatctg ggtcgcccga aagcagggcg cgttccagca
     1501 aagcataaat atcgagtttc atctcaagtc cgccgtgttc ggaaaacaaa tattatagcg
     1561 ttttaaaaaa acaagatgag gcatataatc tccgcgattc ggcattccgc gcccaaaccg
     1621 tcaa
//
LOCUS       DAXHRP010000242         1592 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.242, whole genome shotgun sequence.
ACCESSION   DAXHRP010000242 DAXHRP010000000
VERSION     DAXHRP010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.242"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            59..1432
                     /locus_tag="ACFM72_002079"
     CDS             59..1432
                     /locus_tag="ACFM72_002079"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC6258578.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          415 a          520 c          384 g          273 t
ORIGIN      
        1 cccatcctat cggtttcccg cttcagacgg cataaggtct gaaagaaaga ctacaattat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttacta gccgccgccc aaaccggcac gggcaaaacc gccgccttta tgctgccctc
      241 gctcgaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtg ttgaccccga cgcgcgaact tgccgatcaa atcgaccaaa acgtgcagtc
      361 ctacatcaaa aacctgccgc tgcgccacac cgtcttgttc ggcggtatga atatggacaa
      421 acaaactgcc gacctgcgcg ccggctgcga aatcgtcgtc gccaccgtcg ggcggctgct
      481 cgaccacgtc aaacaaaaaa acatcagttt aaacaaagtc gaaatcgtcg ttctggatga
      541 agccgaccgt atgctggata tgggttttat cgacgacatc cgcaaaatca tgcagatgct
      601 gccccgccaa cgccaaaccc tgctcttttc cgccaccttc tccgcaccga tacgcaaact
      661 ggcgcaagac ttcatgaacg cgcccgaaac cgtcgaagtc gccgcgcaaa acaccaccaa
      721 cgccaacgtc gaacaacaca tcatcgccgt cgataccatt cagaagcgca acctgctcga
      781 acggctgatt gtcgatttgc atatgaacca ggtcatcgtg ttctgcaaaa ccaaacaaag
      841 cgtcgaccgc gtaacgcgcg aactggtgcg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttcc caacaaagcc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcgcg cgggctggac attgccgaac tgcccttcgt
     1021 catcaattac gaaatgcccg cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgcgggc gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 tgaatccatt aaagagctga ccggcaacaa gctgctcatc gagcgcatcg agggcttcga
     1201 gccgcaatgg tgggaacagg gcggcgcaaa accggaaaaa accgaaatgc gcgaaccgag
     1261 acaacgcaac cgctacgaat ccgctagggc tcagcgcgaa aaaaataccc gaccggaaac
     1321 cacggcaaac gatgcgggcg cggcttgcgg aaaaattgcc ggacgcagcc gccgaagccg
     1381 tcgggaacac cggacgtgcg ccctgctcca accgcgttac ggcgtaaaat aaccctgaaa
     1441 atcaaatgcc gtctgaacat ttcccgtttc agacggcatt tttcaaaccg gactgacgca
     1501 tcgggagcaa ccgcccgcac cggataaatt tcttccgcaa acagtttcag acggcatttg
     1561 ctgcctgtac aatatagtgg attaacaaaa at
//
LOCUS       DAXHRP010000243         1574 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.243, whole genome shotgun sequence.
ACCESSION   DAXHRP010000243 DAXHRP010000000
VERSION     DAXHRP010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.243"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..1365
                     /locus_tag="ACFM72_002080"
     CDS             <1..1365
                     /locus_tag="ACFM72_002080"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HFC6258579.1"
                     /translation="FKIGIGPSSSHTVGPMKVAAAFATGLDAQAVRIVIDIYGSLALT
                     GYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIPDRDLNIR
                     GNQVLPKHPNGLRFTAYASDGIVLKEQVYYSTGGGFVVTGEDFERQSETEKTVPYPYN
                     SCAELLDRCRLNRLDISEVVLANEAALAGCSANEIRRRVAGVADVMEGCIKRGLAADG
                     ELPGGLNVRRRAPHLATKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRVVTAPTNG
                     AAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGCQGEVGVA
                     CSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNGIAAEKAL
                     KLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKRAVPVSVR
                     VVEC"
BASE COUNT          352 a          501 c          429 g          292 t
ORIGIN      
        1 ttcaaaatcg gtatcggccc ttctagttcg catacggtcg gcccgatgaa ggtagccgcc
       61 gcctttgcga caggtttgga tgcacaggct gttcgcatcg tcatcgacat ttacggctcg
      121 ctcgcactga ccggatacgg acacggtaca tttgacgcgc tgatgctcgg tttggaaggc
      181 agcctgccgc acgacatccc gcttgccggc attcccgaac gcctcgaacg catccgcacg
      241 cagcacatcc tccggctcaa cgggcaagaa atccgcttca tccccgaccg cgacctgaac
      301 atacgcggca atcaagtgct gcccaaacac cccaacggcc tgcgatttac cgcctatgct
      361 tcagacggca tcgtcttgaa agaacaggtt tattactcga ccggcggcgg gtttgtcgtt
      421 accggagaag atttcgagcg gcagtcggaa acggaaaaaa ctgttcctta tccttacaac
      481 agttgtgccg agctgcttga ccgatgccgt ctgaaccggc tcgacatctc cgaagtcgtg
      541 ttggcaaacg aagccgcgct tgccggatgc agtgcaaacg aaatccgccg ccgcgttgcc
      601 ggcgttgccg atgtgatgga aggctgcatc aaacgcggtt tggcggcaga cggcgagctg
      661 cccggcggat tgaacgtccg ccgccgcgcc ccgcatcttg ccaccaagct caaagtcctg
      721 cgcgaaaccg aaatcgtcaa cacccagctc tggccgatgg tgtacgccat ggcggtcaac
      781 gaagaaaacg ccgccggcgg acgcgtcgtt accgccccga ccaacggggc ggcaggcatc
      841 attcccgccg tattgcacta tttccgcaag ttcaaccccc acgccacaca ggagcgcgtc
      901 gaaaacttcc tgctcaccgc cggcgcaatc ggcatcctct acaaaaccaa cgcctccatt
      961 tccggtgcgg atgtcggctg tcagggcgaa gtcggcgtag cgtgttcgat ggcggcgggc
     1021 gcatacgccg aagtcatcgg cggcacgccc aaacaagtgg aaaacgccgc tgaaatggcg
     1081 atggaacacc atttggggct gacttgcgac cccgtcggcg ggctggtgca aatcccctgt
     1141 atcgaacgca acggcatcgc cgccgaaaaa gccctcaaac tcggcacgct cgcgcttttg
     1201 gaagacggca cggacaaaaa agtctcgctc gacgaagtca tccgaaccat gctgcaaacc
     1261 ggccgggata tgaaggcgac ctacaaagaa acctcgcttg ccggactcgc cgccacgctc
     1321 cggaaaagag ccgtccccgt atccgtgcgc gtggtcgagt gctgaggatg gacagaaacg
     1381 aaaatgccgt ctgaaaacag ttttttagac ggcatttcat ttatttcttg cggctttacc
     1441 gtttcagtgc cagcgtcaac acgcccgccg taaccagccc caagcctatc cattcctgcg
     1501 tgttcgggcg ttcgtctaag aaaaccaccg ccatcaggaa tgcaaaccgg cgttgtttgc
     1561 agcatccggc aaga
//
LOCUS       DAXHRP010000244         1570 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.244, whole genome shotgun sequence.
ACCESSION   DAXHRP010000244 DAXHRP010000000
VERSION     DAXHRP010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.244"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..409)
                     /locus_tag="ACFM72_002081"
     CDS             complement(<1..409)
                     /locus_tag="ACFM72_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258580.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQT"
     gene            complement(425..>1570)
                     /locus_tag="ACFM72_002082"
     CDS             complement(425..>1570)
                     /locus_tag="ACFM72_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HFC6258581.1"
                     /translation="AAVGEIVGEALTNGKNPDTLTAKEREQILAYSKLVAGTVSGVVG
                     GDVNAAANAAEVAVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNVADKR
                     LAASIAICTDISRSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQAD
                     LALQSYHLNTAAKSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPIT
                     NVKYPEGISFDTNLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDI
                     EGITRIKYEIPTLDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQGYSKA
                     SKIAQNERTKSISERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          438 a          286 c          255 g          591 t
ORIGIN      
        1 ttgtttgaga atatgttttt tgtatttctt tacacttttt ttgatattca gggtgagcta
       61 ttaagaaatc agatattgca atattaaagt aatgatatgc taaattaata ggtataatta
      121 attcttcagg attgaaatca tctccaactg aaaaataaat agaaggagct ttatcaatat
      181 actcaaatcc atttacctct tcataatctc caatccatct ggtagcatct attttttcat
      241 attgagcacc tattactcca aaatgtccgg tagttgtaat atttttaaaa cactctaaaa
      301 gcgtatcttt agtttcaaat tggtaaattg tttcaaaaaa aatcgaaata acaaaatggt
      361 tgttatttat agatttttta tttaagttta gaaaaatatt atttttcata atttttcctt
      421 taaattattc tgggtgaatg tttgtaattc ttcctgtatt tacatcaaaa tatgatctaa
      481 atttgattcc gtcaaaggtt tctgagaatt gaatgacatt ttttctttcc gatattgatt
      541 tagttctttc attttgagca attttagagg cttttgaata tccttgtgaa gcagcatttt
      601 gagccatttg aagtatttta tcatcagaaa attttttagg attataaaca gtttttatac
      661 ttgaaatttc cttaaatcca ccatcaggtt tacctgtcct gtctagtgta ggaatctcat
      721 atttaattcg ggtaatgcct tcaatatcag tttgggtttc agattttacg cgtcctcctc
      781 gtgaatttag ttctgccata aaattggtgc ggttatgggc tcctttaatg ccctgttttt
      841 gactaaaacc atcagcattt gccagatgtc tttttaggtt tgtatcgaaa ctgatgcctt
      901 ccgggtattt gacattagta ataggtgtat tttgttttac aaaccctctt ggtattggaa
      961 tgaatctagg attaactcct gaaataagtg tataaccttg gtcggacatc cattcggata
     1021 aaggctttgt attgcccgat tgaagccaag atttagcagc agtattcaaa tgataagact
     1081 gtaaagccaa atctgcttgg gtgtaagatt tgctgaataa tttataccat tcatcatctt
     1141 taccaattag acctgcttcc caagatgaat gaaggcttct actatcgatc aaatgttgtt
     1201 ttctgattgt tctacattca gtactacggg atatatccgt acatattgca atcgaagcag
     1261 caagtctttt atcagcaaca ttttgatact tttttacagt attttttctg cacagttgag
     1321 gattattctg tttggcgcat gcagtcattt cgttatcaaa ttctctaccc tctttgtcgc
     1381 taagctgatt atttttcacc gctacctcag ccgcattcgc cgccgcattt acatcgccgc
     1441 cgaccacacc gcttaccgta ccggcaacca gtttgctgta tgccaaaatc tgttcgcgtt
     1501 ctttagctgt caaagtgtca ggatttttgc cgtttgtcaa agcctccccg actatctcgc
     1561 ccacagccgc
//
LOCUS       DAXHRP010000245         1513 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.245, whole genome shotgun sequence.
ACCESSION   DAXHRP010000245 DAXHRP010000000
VERSION     DAXHRP010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.245"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            128..1258
                     /locus_tag="ACFM72_002083"
     CDS             128..1258
                     /locus_tag="ACFM72_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC6258582.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGGDLERLAARDIIRFPGFVNNVSEVIKEH
                     HIFVLPSYYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAE
                     KMIYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          413 a          353 c          345 g          402 t
ORIGIN      
        1 ggcaacgccg taccggtttt tgttaatcca ctataatacg caggcaaacc caagccttgc
       61 tgggttacag gatgaaaccc tgccgtagca gaccgcattt ccaatccata ttcaaggtgt
      121 ccgccttatg aaaatcgttt ttatcacaac agtcgcatcc agcatttacg gtttccgcgc
      181 ccccgtcatt aaaaaattaa tcggcaaaaa ccatcaggtg tatgcctttg tatcggagtt
      241 ttccgacaat gaattggata ttatcaggga aatgggggtt acacccgtta cctaccgttc
      301 aaaccgcagc gggctgaacc cgttttcgga tataaaatcc accttcctca tctttaaaga
      361 actcaaaaaa atatcgccgg atttggtttt cccttatttc gcaaaacccg tgattttcgg
      421 cacttttgcc gcaaaactgg caggcgtgcc cagaatcgtc gggatgctgg aaggtttggg
      481 attcgcattt accccgcagc cggaaggcat accgttaaaa acaaaaatca taaaggggat
      541 tttgattgcc ttataccgca ttgccctgcc gatgttggaa agcctgattg tattaaaccc
      601 cgacgacaaa gacgaactga cggacaaata cggcatcaaa ataaaaaaca tccatatttt
      661 gggcggaatc ggtctggatt tgcggcaata tccttattcc gaggcggata ttcccgatga
      721 aaaagaaccc gtaaaattcc tctttatcgg cagatttctg aaagaaaagg ggattgatga
      781 ttttattcgg gcggcggaac aggttaagga caaatacccc gatacggttt ttaccgcttt
      841 gggcgcaatc gacaaatcac gcgggggggg gggcgatttg gaacggcttg ccgcccgcga
      901 tattatccgt ttccccggtt ttgtgaacaa tgtttccgaa gtgataaaag aacatcatat
      961 attcgtattg ccgtcttatt atagggaagg cgttccccga agcactcagg aggcaatggc
     1021 cgtcggcagg gcagtgatta cgacggatgt ccccggatgc agggaaacgg tcgccgacaa
     1081 ggtcaacggc ttcctgatcg agccttggaa tccccgcatc ttggccgaaa aaatgattta
     1141 ttttatcgaa aacagggaag ccgtccgcct gatggggaat gcaagttatg cgattgccaa
     1201 agataaattc gatgccgaaa aagtcgattt gaaattgctc gatattttga aggcgtaaac
     1261 aaggctgccc gcttttgagt ttcggtcatt tctgataaac ccccgtcatt cccgccacac
     1321 ccccgtcatt ccctcgaaag cgggaattca ggttcgttta gtttcggtca tttccgataa
     1381 attcttgcaa ctttgcgttt ctagattccc actttcgtgg gaatgacggt aaagattgag
     1441 acctttgcaa taacataggt tactaaaatt ttatgctcaa tctcattttc aaaatgcaaa
     1501 acttttctga ttt
//
LOCUS       DAXHRP010000246         1508 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.246, whole genome shotgun sequence.
ACCESSION   DAXHRP010000246 DAXHRP010000000
VERSION     DAXHRP010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.246"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(133..396)
                     /locus_tag="ACFM72_002084"
     CDS             complement(133..396)
                     /locus_tag="ACFM72_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258583.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(415..>1508)
                     /locus_tag="ACFM72_002085"
     CDS             complement(415..>1508)
                     /locus_tag="ACFM72_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC6258584.1"
                     /translation="NKIGASSLATWSETPWVNNLNVNLANAGSAALINTAVNGGSLKD
                     NLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGAIGA
                     AVGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLVAGATVGVTGGNVDVAANASE
                     TAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGVDAAAAAVPFVPAG
                     ATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVWTTPAGLDYGLDAK
                     HGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNPLPNDSSVYLVDMK
                     KPIGTKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          398 a          375 c          270 g          465 t
ORIGIN      
        1 atgccttcgg ctgccagcag ttgcattgag gccgtctgaa aaacggatat tcagacggcc
       61 tattgcgact ttaaataata tttgggttta aaatatcatc gtatttccca aattcgggga
      121 acagaaaatc aattatttaa atttttcatc ctcataatat gggtgatcaa aaagctctcc
      181 ttcccacata tttatttctt ctatgccttt atctttcata aactcatgat aatcataaaa
      241 atcttttcca tattgtccgt aaaaaatttt catatcccca agccacatag cataacattc
      301 atcgcataaa atgacctccc cagagaaata tttaggcttt gcatgataaa ggtagccttg
      361 ctcacatctt gggcaaattt taatttcttt atccataaga gattcctttc ttaattattt
      421 ctgaggatat gcagaaatga ttttatttgt tcctttttgc acaacaatcc gcacttttgt
      481 ttctcctttt gttccaatag gtttcttcat atctacaaga tatacggatg aatcatttgg
      541 caaaggattt cctttcattc tccaagcttc atcaaccaaa ggcaaaactt ctttacggga
      601 cacattaaaa acagaatgaa caggtttgtt tggatttgga attgtatggg ctaaaacatg
      661 tttaatccta ttaccatgct tagcatctaa cccataatct aaccccgccg gtgttgtcca
      721 aaccttatta accttatcat aagtaagctt gattccggtc tgcttctgaa tttcctgtat
      781 ggctttagcc gtatcaactg cttcgtctcc cgccttcaga acataagccc cgcctcggct
      841 gattttagtc gcacctgccg gaacaaaggg aacggcagct gcggcggcat ccacaccaaa
      901 atcaatcgcc gcttctcgag ccatctgctt atcgccaata gatttggcgt aaatccattt
      961 accgccgtcc catacgaggt tgccgatatc ccaaataata tctaatgcat tatttttaac
     1021 agctgtttcg gaagcatttg ccgccacatc aacattgcct cctgtaacac ctacagtcgc
     1081 tccggctacc aattttgcat acgcagtaat attcgcttta gctttttcaa tttcagaagc
     1141 agtcataccg ctgaaatcgg tattcttaac caaagcctca ccaacaatct caccgactgc
     1201 agcgcctatc gcaccatcct gacacttgcc cttattcgcc gccgcagccg cacagcccgc
     1261 tatggcatgg gcaatcttgt ggactatgta gtgctgatcc aactgtttga ttttactggc
     1321 tgcttctcca tgcgcggtat tgaccaaagc cgcaaggata ttcgcttcca gattgtcttt
     1381 caggctgccg ccgttgacag cggtattaat cagtgcggca ctgcccgcat tggccaagtt
     1441 gacgttgagg ttgtttaccc aaggggtttc gctccaagtg gcaagggagg aagcaccgat
     1501 tttgttgg
//
LOCUS       DAXHRP010000247         1504 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.247, whole genome shotgun sequence.
ACCESSION   DAXHRP010000247 DAXHRP010000000
VERSION     DAXHRP010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.247"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            32..1432
                     /locus_tag="ACFM72_002086"
     CDS             32..1432
                     /locus_tag="ACFM72_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HFC6258585.1"
                     /translation="MTPSALKKTVLLLGTAFAAASVHASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
BASE COUNT          395 a          487 c          358 g          264 t
ORIGIN      
        1 atccaccgtc cgccttttta cggaaaccga aatgacccct tccgcactga aaaaaaccgt
       61 cctgctgctc ggcactgcct ttgccgccgc atccgtccac gcatccggct accacttcgg
      121 cacacagtcg gtcaacgcgc aaagcacggc aaatgccgcc gccgcagaag ccgccgacgc
      181 atcgaccatc ttctacaacc ctgccggcct gaccaaactc gacagcagcc agatttccgt
      241 caacgccaac atcgtgctgc ccagcattca ttatgaggcg gattccgcca ccgactttac
      301 cgggcttccc gtccaaggtt cgaaaagcgg caaaatcacc aaaaccacgg tcgcgcccca
      361 catctacggc gcatacaaag tcaacgacaa tctgaccgtg ggcttgggcg tgtacgtccc
      421 cttcggctct gccaccgaat acgaaaaaga ttccgtgttg cgccacaaca tcaacaaact
      481 cggtctgacc agcatcgccg tcgaacctgt cgccgcgtgg aaactcaacg accgccattc
      541 cttcggcgca ggcatcatcg cccaacatac ttccgccgaa ctgcgcaaat atgccgactg
      601 ggggattaag agtaaagcag agatattgac ggcaaaaccg cccaaaccta acggtgtagc
      661 cgaagctgca aaaattcagg ccgacggaca cgccgatgtc aaaggcagcg attggggctt
      721 cggctaccaa ctggcgtgga tgtgggacat caacgaccgt gcgcgcgtgg gcgtgaacta
      781 ccgttccaaa gtctcgcaca cgctcaaagg cgatgccgaa tgggcggcag acggcgcggc
      841 ggcgaaagca atgtggagta cgatgcttgc agcaaacggc tacacggcga atgaaaaagc
      901 ccgcgttaaa atcgttacgc ctgagtcttt gtccgtacac ggtatgtaca aagtgtccga
      961 taaagccgac ctgttcggcg acgtaacttg gacgcgccac agccgcttcg ataaggcgga
     1021 actggttttt gaaaaagaaa aaaccatcgt caacggcaaa tccgaccgca ccaccatcac
     1081 ccccaactgg cgcaacacct acaaagtcgg cttcggcggt tcttatcaaa tcagcgaacc
     1141 gctgcaactg cgcgccggca tcgcttttga caaatcgccc gtccgcaacg ccgactaccg
     1201 catgaacagc ctacccgacg gcaaccgcat ctggttctcc gccggtatga aataccatat
     1261 cggtaaaaac cacgtcgtcg atgccgccta cacccacatc cacatcaacg acaccagcta
     1321 ccgcacggcg aaggcaagcg gcaacgatgt ggacagcaaa ggcgcgtctt ccgcacgttt
     1381 caaaaaccac gccgacatca tcggtctgca atacacctac aaattcaaat aaacggcccg
     1441 ccgtttgaat gtaacaatgc cgtctgaaac agatttccgt ttcagacggc attgttttag
     1501 gctc
//
LOCUS       DAXHRP010000248         1503 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.248, whole genome shotgun sequence.
ACCESSION   DAXHRP010000248 DAXHRP010000000
VERSION     DAXHRP010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.248"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(141..1133)
                     /gene="porB"
                     /locus_tag="ACFM72_002087"
     CDS             complement(141..1133)
                     /gene="porB"
                     /locus_tag="ACFM72_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HFC6258586.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKTGVETSRSVYYEDGKA
                     AEVTTGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFVQYGGAYKRHEQIDNVKIEKYQIHRLVSG
                     YDNDALHASVAVQQQDAKLVEDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFD
                     DADRYNTYDQVVVGAEYDFSKRTSALVSAGWLQEGEGESKFVSTAGGVGLRHKF"
BASE COUNT          357 a          337 c          389 g          420 t
ORIGIN      
        1 atgtaggttt tcttaaccct gagtcctaga ttcccgcctg cgcgggaatg acggcatatt
       61 ttgacattga ataaaaaaga ctaaaaacag aaaaaagcct gtctggcgac aggctttttg
      121 ttgataccaa tctttgcaga ttagaatttg tggcgcagac cgacaccgcc ggcagtcgat
      181 acgaatttgc tttcgccttc gccttcttgc aaccaaccgg cagaaaccaa ggcagaagtg
      241 cgtttggaga agtcgtattc cgcaccgaca accacttggt cgtaagtatt gtagcggtct
      301 gcatcatcaa acgagccttt gaagccgtgg gcgtaagaaa cgcggggcgt tacgttgccg
      361 aagcggtatg ccaaggtagc ggcaacttcg gtttgagagt tgtgcgaata attgtcttca
      421 accaatttgg catcttgttg ttgtacggct acggaagcgt gcagggcatc attgtcgtaa
      481 ccgctgacca aacggtgaat ctggtatttc tcaatcttca cgttatctat ctgctcatgt
      541 cttttatagg caccgccata ttgcacgaag aagccgccgt ttttgtagtt gaagccggcg
      601 tggtaagatt cgctgttatg tctgcctgca ttgtcgttaa gcgcgtattg tacgctgccg
      661 ctgaggccgg caaattcggg agaatcgtag cgtacggaaa tgaggcgtgc ctcgggttcg
      721 gcaattttgt ttacacccaa atagtcgctt ttgctatccc aaggattgat gtcgccggta
      781 tctttcagga cgctgttcaa acggccgacg cgcaatttac cgaagccgcc tttcaaaccg
      841 atgaaggatt ggcggttgcc ccaaccggag tcagtaccgg cgatagatgc cttttgctca
      901 acctgccaaa tggctttcag accgttaccg aggtcttctt ggcctttgaa gccgattttc
      961 gaacccaaat caacgatgcc ggtaccggtt gtaacttcag cagctttgcc gtcttcgtaa
     1021 tatacagagc gggaagtttc tacgccggtt ttgatggtgc cgtacagggt aacgtcagcc
     1081 attgctgcaa caggaagggc tgccaaagtc agggcaatca gggatttttt cattgctgta
     1141 ttcctttttt ggttaagaaa tttaagccgg ccgggctttc caagccgctt agctttgcat
     1201 ttaccgccga ggggctcggc gattacatgt ctgaaactat agatgttcct gtctgaaaaa
     1261 acaaacttct gcctgttttt gtgtggaatt cgatgtgtat tttgaagggc ggatagagat
     1321 attgtgggta ttttttgttt tataacatat ggttatttaa attttttaag atttgcattt
     1381 ttacaacact tactcgggag ggtattggag ggcattgcaa accgagggtt ataaagacgg
     1441 caaaaaacgc gcacgtggtt tctttcggaa cgggcggatg caaaacccgc ccctgcggca
     1501 gga
//
LOCUS       DAXHRP010000249         1482 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.249, whole genome shotgun sequence.
ACCESSION   DAXHRP010000249 DAXHRP010000000
VERSION     DAXHRP010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.249"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..171)
                     /locus_tag="ACFM72_002088"
     CDS             complement(<1..171)
                     /locus_tag="ACFM72_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC6258587.1"
                     /translation="MSTFFQQTAQAMIARHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YLRDHRGRPAYPL"
     gene            complement(233..904)
                     /locus_tag="ACFM72_002089"
     CDS             complement(233..904)
                     /locus_tag="ACFM72_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6258588.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          359 a          329 c          362 g          432 t
ORIGIN      
        1 caggggatag gcgggacggc cgcggtggtc tctaaggtaa cgggtttttt gacggttcag
       61 gtactgctcg atcggctgcc aatcaatcac ctggtccaac ttcaatagcg ggaaacggtc
      121 gatgtgtctg gcaatcatgg cttgggcggt ttgctggaag aaggtgctca tggaaaatcc
      181 cctaaatgtc ttggtgggaa tttaaggggt tttggggaat tttgcaaagg tctcagtcta
      241 tgcccgatat acaattttga tacacaaact tggaaatatc ggtatcgtcg ccggagcgat
      301 agaatgcgga cagtttttca ttgaattgcg gcatctgcat ttcggagatt tccaagatgc
      361 cgcagccccc cgccatcatc agaccgttgg caaataaggt tgccgttcgt ttgttgccgt
      421 cccaaaaaac ctgctgccgc atacaataaa gcataaaacg gacggctgcc tccgtcgtcg
      481 aaccgctttg cagtccgata ttttgtaaca cgcgggccac ttcaatttcc ttcactggat
      541 tcggggcatg acgggaaccg tccaatagcg ttacgccgac cgaaccggta cggaaatcac
      601 cgggtgccaa agaatcgtcc ttggcaacaa tgttgttgat ttttttaagg agtgaaatat
      661 cgaccggttc gccgtttgaa atatgcgaaa tcacatattg ataggcacgt ttcaggttca
      721 agatggtttg gatgtcttcc agtgacgcgg aggctacatt tttgccatgg ataatttgtt
      781 cggtctgcaa caaggtcgtc tgacaattct caaaacggct gaggttgtga atttgggcaa
      841 ccaatacttt ctttgccaaa aaaatatttt ctttcaaact caacttgtat ttgtcgggaa
      901 acacgataat tccttaaata attaaagcag tacgttaaat catcatctta tcatcacttt
      961 cggggtttat gttgcgtgcg tccgttttct aatacggttt cccatcccgc gaaacgaggc
     1021 ggaggcctgt gcaaaaaacc tgttcacgaa attttccgca ttaacgatac gctgaaaatg
     1081 cgctaaaaat gactgtgttt gaatatcggt tgatttcatc cgtttgtgta acctcgcgcc
     1141 ggttttgtca tgattttgca ttatagtgaa ttaaatttaa accagtacag cgttgcctcg
     1201 ccttaccgta ctatctgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatt
     1261 cactatattt ttgtcatgcg gatatttcac gggatgacaa aacgggcgca aaaaagcccg
     1321 attggaaaat ccgaatcggg cttttttgtg atgttctgtt cgatttgcgt actaactgcc
     1381 ggccggagcg tccgcgcccg gtttggcagg tcggattctc gaatccgacg gctatttgag
     1441 atggcaggct tttgtcggat acaagtatcc gacctacggc tt
//
LOCUS       DAXHRP010000250         1453 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.250, whole genome shotgun sequence.
ACCESSION   DAXHRP010000250 DAXHRP010000000
VERSION     DAXHRP010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.250"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(400..711)
                     /locus_tag="ACFM72_002090"
     CDS             complement(400..711)
                     /locus_tag="ACFM72_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC6258589.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(708..1076)
                     /locus_tag="ACFM72_002091"
     CDS             complement(708..1076)
                     /locus_tag="ACFM72_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HFC6258590.1"
                     /translation="MRIFKNQWIVKFAKKHKINDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILLKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
BASE COUNT          275 a          400 c          331 g          447 t
ORIGIN      
        1 aaaacgtcgg cgttaaggga aggggatcga gaatttgagc cgttgtttca aaatgccgtc
       61 tgaaatcgtt tgagattcag acggcattta aacagttctg cgccccgccc gttttgcctt
      121 caagcccgcg ccgcttaaat ccaatccccc ctgcaacggg cgcaaaaaaa tccccgtgcc
      181 tcgcggtcgg ggatgtttcg ggtttcgcgc ccgtctgcgc cgtgccttgc tgtcgggcta
      241 tgtcgtctgc accgccgccg tttcggcttg gtttgatgcg gtcggggcat ttgtgcggct
      301 acgccctgat attcagttcg gcggtcttgc ctgttttggc aggcatattc agcagcgcgt
      361 ctattgtgaa cttgctgatt ttgccgtttg ccaagtcggc tacgcaatgg cttcgatacc
      421 cttgtttttg acgatggtca gcagcttcaa cgccgcgccg ctgggctttt taacgccccg
      481 ctcccaagcc gaaacgtgat tttttcccac gttgagatag atggcgaaag cggcttgcga
      541 tagtgcctcc ttctccctga ttgccttgat gtctccgccg ctcaacggtt tgatttcggt
      601 caggcatgac ttgtcaaagc cgcgcatagt ctttttgtcg attgcgccga tgttgtaagc
      661 cccttccatc atttcatgaa tggcggctaa tgcctcgctt ttgtatttca tgattctatc
      721 tccgtgataa tgccgtcttc tttcaaagcc gccagctctg cccgcgtgta tttcagataa
      781 tatgcggcgg cttttcggta aacgtccagt tctttatccg aaatgttttc cctgtcgttc
      841 ttggcaaagg cgtaaacaaa aaatgccctg tctgcctgtt tgagcagtat caggctgcga
      901 tagccgccgc ttctgccttg tccttgcctt gctatgcgct gcttaatcac accgccgcct
      961 aaatctgcgt ctatcagccc gttatccgcc cgctctaccg cttccagcag ctcggaatcg
     1021 ttgattttgt gcttcttggc aaatttcact atccattggt ttttgaatat ccgcattgtg
     1081 tagccgttga ttagtgatac ttggaattat accagagaca gacaacacgg caagctgcct
     1141 tttttatgcc ccgcaatttc tccgtttatg ccgcctgaaa caccggcagc taacctgatt
     1201 attttttaat caatcgcttt taatggctca aattgcgttt ttagcgcgtt tcgctgtctt
     1261 cctatgcccg tatataacca agcggtttaa ccaccattcc tgcctcaaaa taggcgcggt
     1321 tccgtgcgtt ttggcttttc attccgctac gctcccactg ccaagacggt gaaaaaccgg
     1381 aaaaccccaa aagttgttac cgattcgtta ccatttgtta ccgcatttgt taccaatttt
     1441 ttatcttttt ctt
//
LOCUS       DAXHRP010000251         1399 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.251, whole genome shotgun sequence.
ACCESSION   DAXHRP010000251 DAXHRP010000000
VERSION     DAXHRP010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.251"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..329
                     /locus_tag="ACFM72_002092"
     CDS             <1..329
                     /locus_tag="ACFM72_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HFC6258591.1"
                     /translation="IATTVPAQQTFLDAAELMQWSIETEGLGLNVISHKILGKDHAQV
                     EFEAYFRDGQHRSAHHELSGFINIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGK
                     YLKPVA"
     gene            complement(546..1340)
                     /locus_tag="ACFM72_002093"
     CDS             complement(546..1340)
                     /locus_tag="ACFM72_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC6258592.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVEWIRENQ"
BASE COUNT          371 a          418 c          312 g          298 t
ORIGIN      
        1 tcatcgctac taccgttccg gcgcaacaaa cattcctcga tgccgccgaa ctgatgcaat
       61 ggagtataga aaccgaaggg ctgggcttga acgtcatctc gcacaagata ctcggcaaag
      121 accacgccca agtcgaattt gaagcctact tccgagacgg acaacaccga tccgcgcatc
      181 acgaactgtc cggcttcatc aacatcggcg gacaatggta ttttatcgat cccaccgttc
      241 cgcatcctgc gatgaaacaa ccctgcattt gcggatcggg caaaaaattc aaagcctgct
      301 gcggcaaata tctgaaacct gtcgcataaa aatgccgtct gaacgttcag acggcatttt
      361 caacacgcaa aaaaaccatt cataccaagg gtaagtatga atggtcaata cattgcggga
      421 aaacgtctta cttgctgcac tgccgaaaag ggagaaacgg cagcggtaat cagcggaaag
      481 gattgtaccc gaattaatgt taagaaacgt taatcgtgaa aatatattaa caaacctgtt
      541 gaaacctatt ggttttcccg tatccactcg acccagcgtt caaacagctt cggttcgagc
      601 gcggcgacga ccgagcgttt gaacacgtgt tcaccactcc aaaacccgtc gccttccaaa
      661 gtcgtcagcc tgccgcccgc ctcctcgaaa atcaacgcgc cggcggcata atcccacagc
      721 ttctgcccgc cgtggacata aacatcataa cgcccgcacg ccagataaca ccagtccaac
      781 gtactgctgc ccatactccg tatcgttcca aaaggcgcga gcgtactcat gcggctggac
      841 agtttgcccg aacgcagata tttgatttcc acgcccgcga ttgcctcatt caacttctta
      901 tccacgagac gcaaaggcag gcgtgtcccg tttaaaaacg caccctgccc gcgttcagca
      961 taaaaacatt cgccgctgac cggattgtag attacgccca attcggcgcg cccgttgcgg
     1021 acaaacgcca ccgacacggc aaaatgcggc agcccgttga caaaattgtt tgtcccgtct
     1081 atcggatcga caatccacag ccccttttcc cccgaatatt gttcccacag agccgactgt
     1141 tcctgtcgcg acatttcctc gcccaacatc gggcaatcga tcagaagcgg caacgcggcg
     1201 gcaaaagccg tctgcgcggc aatgtccgcc tcgctcaaca tcgaaccgtc ttccttgcgg
     1261 tgggacggcg tattcaaaaa acgcggcata atttcggttt gcgcgatatg gcgcacgact
     1321 ttctgcaaac ggtgtaacac ttcctactgt cctcatattt tgaacttgcg gcgcgcgaac
     1381 gtatatagtg gattaaatt
//
LOCUS       DAXHRP010000252         1385 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.252, whole genome shotgun sequence.
ACCESSION   DAXHRP010000252 DAXHRP010000000
VERSION     DAXHRP010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.252"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            52..1269
                     /locus_tag="ACFM72_002094"
     CDS             52..1269
                     /locus_tag="ACFM72_002094"
                     /inference="COORDINATES: protein motif:HMM:NF044401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258593.1"
                     /translation="MDKAAENLGPAGKAAVNALGGAAIGYAAGGNVGTAAVGANVDWN
                     NRQLHPKETQILNKLSKGKSAEEQYRLKAAACALTRCAEGVPDFDPLYKGLKNLQDAG
                     KQFVAEQNVLMRTDAFKYGTWNSLNDIRSSYDRAATKIKGAGNMGLGATTFVGSGAIG
                     GGLCSTGIGCAAGGLIATAGMTGGYTQASEGSRQLFGTYQSDFGKKVVLSLGTPIEYE
                     SPLVSDAKNLAVWGLETLITRKLGNLATGVKTSLTPKTADVQRNILSQSEVGIKWGKG
                     IEGQGMPWEDYVGKGLSANARLPKNFKTFDYFDRGTGTAISAKTLDTQTTARLSKPEQ
                     LYSTMKGYIDKTANFKSYELSEVPLRADMIKQREIHLAIPAQTNKEQRLQLQRVVEYG
                     KSQNITVKITEIE"
BASE COUNT          413 a          300 c          373 g          299 t
ORIGIN      
        1 agcctcggcg gcatactggc cggcagcggc acttcccttg ctgcaccgta tttggacaaa
       61 gcggcggaaa acctcggtcc ggcaggcaaa gcggcggtca acgcactggg cggggcggca
      121 atcggctatg cggcgggcgg gaatgtcggt acggcggcag taggggcgaa tgtcgattgg
      181 aacaataggc agctgcatcc gaaagaaaca caaatcctta acaaactgtc aaaaggcaaa
      241 tcggctgaag aacagtaccg cctaaaagcc gctgcatgtg cattaacccg gtgcgcggaa
      301 ggcgtacctg acttcgaccc tctttataaa ggactaaaaa acctccaaga tgccggtaaa
      361 cagtttgtag cggaacaaaa cgtattgatg cggacggatg catttaaata tggaacatgg
      421 aacagcctga atgatatacg cagcagttac gaccgtgctg ccaccaaaat taagggtgcg
      481 ggcaatatgg gattgggtgc aacgactttt gtcggttcgg gtgctatagg cggaggtctg
      541 tgcagtaccg ggattggctg tgcggccggt ggacttattg caacggcagg tatgaccggt
      601 ggttatacac aggcctcaga aggaagccgg caattgtttg gcacttacca gtccgatttt
      661 ggtaaaaaag ttgtcctatc tttgggtaca ccaatagaat acgaatcgcc gttagtatct
      721 gatgcgaaaa atctagccgt atggggattg gaaacgctga ttacgcgcaa attgggaaac
      781 ttggcaacgg gtgtgaaaac ttccttgact ccgaaaactg ctgacgtaca gcgaaatatc
      841 ctgtcccaat ccgaagtcgg tatcaagtgg ggcaagggga ttgaaggaca gggaatgcct
      901 tgggaggatt atgtcggtaa gggcttgtct gccaatgcaa ggttacctaa aaattttaaa
      961 acatttgatt attttgatcg tggtacaggc acggcaatca gtgccaaaac tctggatacg
     1021 caaactacgg cacgcctgtc caaacccgaa cagctttaca gtaccatgaa agggtacatc
     1081 gataagacgg caaatttcaa aagttatgaa ttatcagaag taccgttaag ggcagacatg
     1141 atcaaacagc gcgaaatcca tctggccata cccgcacaaa ctaataagga gcaaagattg
     1201 cagttgcaac gtgtggtaga gtatggcaaa agtcaaaaca ttacagtcaa aattacggag
     1261 atcgaataaa tgactttcaa tcaagaacaa gattattggg ctggctataa ggcaaatgaa
     1321 agagccttga ttattcaaac atggtcagga tttgggcgat atgctccaga ccacctatat
     1381 ccccc
//
LOCUS       DAXHRP010000253         1320 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.253, whole genome shotgun sequence.
ACCESSION   DAXHRP010000253 DAXHRP010000000
VERSION     DAXHRP010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.253"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            241..921
                     /locus_tag="ACFM72_002095"
     CDS             241..921
                     /locus_tag="ACFM72_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC6258594.1"
                     /translation="MQADLAYAAERITHDYPKATGADKDKISTVSDYFRNIRAHSIHP
                     RVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKKVQENQGTRKDLKTENQENGSFHAA
                     SSLGLSAIYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIY
                     NGESTQNAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEV
                     SLGMRYRF"
BASE COUNT          369 a          378 c          276 g          297 t
ORIGIN      
        1 ggtgcttcag tatcttagag aatcgttctc ttttttgttc atccgctata ttgtgttgaa
       61 acatcgcccc aaacccgata taatccgccc ttgaaccatc agtgaaaatc gttcttttta
      121 atcagttaaa ccgaatacgg agtcgaaaat gaatccagcc cccaaaaaac cttctcttct
      181 cttctcttct cttccgcagc gcaggcggca agtgaagaca gcgggcacgg cccgtattat
      241 gtgcaggcgg atttagctta tgccgccgaa cgtattaccc acgattatcc gaaagcaacc
      301 ggtgcagaca aagacaaaat aagcacagta agcgattatt tcagaaacat ccgtgcgcat
      361 tccatccacc ctcgtgtgtc ggtcggctac gacttcggcg gctggagaat agcggcagat
      421 tatgccagtt acagaaaatg gaacaacaat aaatattccg tcaacacaaa aaaggtgcaa
      481 gaaaaccaag gcaccagaaa agacctgaag acggaaaatc aggaaaacgg cagcttccac
      541 gccgcttctt ctctcggctt atccgccatt tacgatttca aactcaacga taaattcaaa
      601 ccctatatcg gtgcgcgcgt cgcctacgga cacgtcagac acagcatcga ttcgaccaaa
      661 aaaacaacag aggttgttac ctccacccat ggtggtgctg acacaaaacc tacgatttat
      721 aatggggaaa gtacgcaaaa cgcctatcac gaaagccaca gcatccgccg cttgggtctt
      781 ggtgtcgtcg ccggtgtcgg tttcgacatc acgcccaagc tgactttaga caccggatac
      841 cgctaccaca actggggacg cttggaaaac acccgcttca aaacccacga agtctcattg
      901 ggcatgcgct accgcttctg attccccgat accgatgccg tctgaacctt cagacggcat
      961 tttttacaca attcccaccg tttcccatca ttcccgatac accgtaatct cgaaacccgt
     1021 cattcccgcg caggcgggaa tccagacctg tccgcacaga aacttatcgg ataaaacggt
     1081 ttctttagat tttacgtcct agattcccac ttccgtggga atgacggttc agttgcattc
     1141 ccgacaacaa cgcaatctcg aaacccgtca ttcccgcgca ggcgggaatc cagacctccg
     1201 acgcggcggg aatctatcgg aaatgactga aaccccgaga ttctagattc ccactttcgt
     1261 gggaatgacg gttcagttgc gttccgacaa caccgtaatc ttgaaatccg tccgacaaca
//
LOCUS       DAXHRP010000254         1304 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.254, whole genome shotgun sequence.
ACCESSION   DAXHRP010000254 DAXHRP010000000
VERSION     DAXHRP010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.254"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..890
                     /locus_tag="ACFM72_002096"
     CDS             <1..890
                     /locus_tag="ACFM72_002096"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC6258595.1"
                     /translation="TAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKDAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSP
                     AQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
BASE COUNT          350 a          384 c          335 g          235 t
ORIGIN      
        1 ccacggcgca aaaagaagcc gcacccgcac aacagcaggg cggtatccgc ttttcagacg
       61 gcattgccgc cgttgccgac aacgaagtca tcacgcgccg ccggcttgcc gaagccgttg
      121 ccgaagccaa agccaacctg cccaaagacg cgcagataag cgaatccgag ctgtcccgac
      181 aggtgctgat gcagcttgtc aaccaatccc tgattgtaca ggcgggcaaa cgccgcaaca
      241 ttcaagcaag cgaagcggaa atcgatgccg tcgtcgcaaa aaatcccgcc ctcaaaaacc
      301 tcagccccgc ccaacgccgc gattttgccg acaacatcat tgccgaaaaa gtccgccagc
      361 aggcagtgat gcagaacagc cgcgtgagcg aagctgaaat cgatgccttc ctcgagcagg
      421 cgcaaaaaca aggcatcacc ctgcccgaag gcgcaccgtt gcgccaatac cgcgcccaac
      481 acatcctgat taaagccgac agcgaaaacg ccgccgtcgg cgcggaaagc accatccgca
      541 aaatctacgg agaggcccgc agcggcacag acttttccag cctggcgcgc caatattcgc
      601 aagacgcgag cgcgggcaac ggcggagatt tgggctggtt tgccgacggc gtgatggttc
      661 ccgcctttga agaagccgtc cacgcgctca aacccggaca ggtcggcgcg cccgtccgca
      721 cccaattcgg ctggcatatc atcaaattga acgaagtgcg cgatgccggc acacctcagg
      781 aacgtatccg caattccgtg cggcaataca tcttccaaca aaaagccgaa caggcaaccg
      841 tcaacctgtt gcgtgacctg cattccggcg cgtatgtcga catccgctaa ggcggtttga
      901 agcaaaaagc cataccgatc ggcaaaaatc cgggcggtat ggctttttgg atttcgagtt
      961 acttttacac cgtcattcat cattcccgcg aaagcgggaa tctagaaacg aaaagtaaca
     1021 ggaatttatc gggaatggct ggagtttaaa ggactggatt cccgccgtcg cgggaatgac
     1081 gggattttgg gttgtggtaa tttatcggaa aaacaaaaaa acctatgccg tcattcccga
     1141 gcaggcggga atccggttat ttaaaactgc agaaatttat ccgaagcaac aacaatcttt
     1201 ccatcgtcat tcccgcgtag gcgggaatct aggacgtaga atctaaagaa accgttttat
     1261 ccgataagtt tctgtaccga agaatctgga ttcccgcttt cgcg
//
LOCUS       DAXHRP010000255         1298 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.255, whole genome shotgun sequence.
ACCESSION   DAXHRP010000255 DAXHRP010000000
VERSION     DAXHRP010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.255"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            233..>1298
                     /gene="pilC"
                     /locus_tag="ACFM72_002097"
     CDS             233..>1298
                     /gene="pilC"
                     /locus_tag="ACFM72_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC6258596.1"
                     /translation="MNKTLKRQVFRHTALYAAILMFSHTGGGGAQAQTSKYAIIMNER
                     NQLEVKQEGSYSTLREKDRERKFDFNANGGGGGSVFFDNTDTLVSRQSGTAVFGTATY
                     LPPYGKVSGFDANALKERNNAVDWIHTTRAGLAGYAYTNVICRSSDQCPQLVYETKFA
                     FSNKDLANNAGRLDRHSDPSRENSPIYKLKDHPWLGVSFNLGSEGTAKDGKSFNKLVS
                     SFDENNSNQNLVYTTKGHHISLGDWQREHTAMAYYLNAKLHLLDKKGIKDIAQGKTVD
                     LGTLRPRVEAKVRRGGWNLLNFWATWKIEDKGNITVRLDLPEVKAGRCTNAAHPNPKV
                     QALSPALTAPALWFGPVQNGK"
BASE COUNT          348 a          349 c          343 g          258 t
ORIGIN      
        1 caaccagcaa ttcggcgggc gcgggatcgg gcggtttgcc gaatcccgcc gtttgcggcg
       61 cgcctgccgc cgacggtatc ccgcgaagca agatttaagg gataaaatat gttccaacac
      121 gcagggcggc acataaggcg ccgccctgat tcggaagggc ttgcacccct cccggacaaa
      181 gcctgatcct gccgccccga agggcggggg gtttgaccga aaaggaaata cgatgaataa
      241 aactttaaaa aggcaggttt tccgccatac cgcgctttat gccgccatct tgatgttttc
      301 ccataccggc gggggggggg cgcaggcgca aaccagtaaa tacgctatta tcatgaacga
      361 acgaaatcag ctggaggtaa agcaggaggg ttcatattca accttaaggg aaaaagacag
      421 ggaacgcaaa tttgacttta atgcgaacgg agggggtgga ggttctgtct ttttcgacaa
      481 taccgatacc cttgtttccc gacaaagcgg tactgccgtt tttggcacag ccacctacct
      541 gccgccctac ggcaaggttt ccggttttga tgccaacgct ctgaaagagc gcaacaatgc
      601 cgtcgattgg attcatacca cccgggccgg gctggcaggc tacgcctaca ccaacgtcat
      661 atgcagaagc agcgaccaat gcccccaact tgtctatgag accaaatttg ccttcagcaa
      721 caaagatttg gcaaacaatg cgggcaggct ggataggcac tcggacccaa gccgcgaaaa
      781 ttcgcccatt tacaaattga aagatcatcc atggttgggc gtatctttca atttgggcag
      841 cgagggtacc gccaaagatg gcaaatcatt caacaaattg gtatcttctt ttgatgaaaa
      901 caatagtaat caaaacctcg tctatacgac aaaaggccac catatttccc ttggcgactg
      961 gcagcgcgaa cataccgcca tggcctatta tctgaacgcc aaactgcacc tgctggacaa
     1021 aaaagggatt aaagatatcg cccaaggcaa aacagtggat ttgggcacct tgagaccgcg
     1081 cgtcgaggca aaggtaaggc ggggggggtg gaatctgcta aatttttggg ctacgtggaa
     1141 gattgaagat aaagggaaca ttacagtccg cctcgacctg ccggaagtca aagccgggcg
     1201 ctgcaccaac gccgcccacc ccaatcccaa agtccaagcc ctttcccccg cactgactgc
     1261 ccccgcgctg tggttcggac ctgtgcaaaa tggtaagg
//
LOCUS       DAXHRP010000256         1297 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.256, whole genome shotgun sequence.
ACCESSION   DAXHRP010000256 DAXHRP010000000
VERSION     DAXHRP010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.256"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..525
                     /locus_tag="ACFM72_002098"
     CDS             <1..525
                     /locus_tag="ACFM72_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFC6258597.1"
                     /translation="EAGAGIATGAVTVGNAWEAPVGALSKAKAAKQAIPTQTVKELDG
                     LLQESKNIGAVNTRINIANSTTRYTPMRQTGQPVSAGFEHVLEGHFHRPIANNRSVFT
                     ISPNELKVILQSNKVVSSPVSMTPDGQYMRTVDVGKVIGTTSIKEGGQPTTTIKVFTD
                     KSGNLITTYPVKGN"
     gene            532..1041
                     /locus_tag="ACFM72_002099"
     CDS             532..1041
                     /locus_tag="ACFM72_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258598.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
BASE COUNT          425 a          243 c          253 g          376 t
ORIGIN      
        1 gaagcgggcg cgggaatcgc cacgggtgcg gtaacggtag gcaacgcttg ggaagcgcct
       61 gtgggggcgt tgtcgaaagc gaaggcggcc aagcaggcta taccaaccca gacagttaaa
      121 gaacttgatg gcttactaca agaatcaaaa aatataggtg ctgtaaatac acgaattaat
      181 atagcgaata gtactactcg atatacacca atgagacaaa cgggacaacc ggtatctgct
      241 ggctttgagc atgttcttga ggggcacttc cataggccta ttgcgaataa ccgttcagtt
      301 tttaccatct ccccaaatga attgaaggtt atacttcaaa gtaataaagt agtttcttct
      361 cccgtatcga tgactcctga tggccaatat atgcggactg tcgatgtagg aaaagttatt
      421 ggtactactt ctattaaaga aggtggacaa cccacaacta caattaaagt atttacagat
      481 aagtcaggaa atttgattac tacataccca gtaaaaggaa actaactaaa tatgagtaac
      541 tttgaaaaaa aatatatttt agaattaaat gatgctttaa gccatttaaa tcataactct
      601 acctcatttg atttattgaa agttttgatt tcatggttat caaacgatat tgtcattgat
      661 aaatttaaaa ttttaggtta tgactttagt aaatatatcg aaatgaatcc cgatgactat
      721 ccggttgaaa aatctatatt gaatagagag gaaattattt atctcaaaaa caatatttat
      781 cgtaaaatat catcaggaaa ttttaaattt caatactttg tacaatatat tagagatatt
      841 ttagaatatt tatttattga acatattgaa agagtctgtc cttactgcga atggggtgaa
      901 atgcaaaaat tagaagaaca aaatacgcat gaaacggtgt atctctgtac tcaatgtgga
      961 tgtgcttttt ataacgataa ttcacaattt ttattaaaaa cccctttaac cattccaatg
     1021 aaacgtgatg aatttaaata aacaagccgt agcctgcatg aaccctaaaa tccacgtgta
     1081 gcgtgtgtgc gccagcacgc atgcgttcca tgatttacgg ctcaatgccg tctgaaaagc
     1141 tcacaatttt tcagacggca tttgttatgc aagtaaatat tcagattccc tgtatgctgt
     1201 acagacgcgg gagtgttaag ccccccttgt ttgaagctcc gcggctcctg ccgagcttca
     1261 ccgaccccgt tgtgcccaag ctctctgctc ccggcgg
//
LOCUS       DAXHRP010000257         1288 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.257, whole genome shotgun sequence.
ACCESSION   DAXHRP010000257 DAXHRP010000000
VERSION     DAXHRP010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.257"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            283..1288
                     /gene="pilC"
                     /locus_tag="ACFM72_002100"
                     /pseudo
     CDS             283..1288
                     /gene="pilC"
                     /locus_tag="ACFM72_002100"
                     /inference="COORDINATES: protein motif:HMM:NF040838.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
BASE COUNT          379 a          310 c          318 g          281 t
ORIGIN      
        1 ccgttgggca tctgcagcgg tttgctaaaa aacgctttac cgtgatcagt gtgcaaagtt
       61 aaaatgggga ggtaagcttt tcaatcagca attcggcggg cgcggaatcg ggcggtttac
      121 cgaacctcgg cgttcgcggc gcgccgcccc gtcccgtgaa ggcaaactca aggaataaaa
      181 gatgaataaa acttggaaac ggcaggtttt ccgccatacc gcgctttata ccgccatatt
      241 gatgttttcc cataccggcg ggggggggcg caagcgcaaa cgtatccata cgctcttgtg
      301 atgaacggac aaaagctgcc cgaggtaaag tgggggcaat catataattc attgccgcaa
      361 aaaagcaacc cccgccaagt taactttacg acatctttta gtggatacaa aaaaaacact
      421 actttctcat tcaataatac cgatgaagtt gttgctcaaa aaaacggtgt taccgttttc
      481 ggcgcggcga cctacctgcc gccctacggc aaggtttccg gttttgatga aaagaggctg
      541 aaagagcgcg gcgatgtcct tggttggatt ggtacgaccc gcccggggtt ggtaggctac
      601 agctacgaag gtaacacatg ctccagcgga gactgtcctg atgttagcta taaaacccaa
      661 tttaccttcg gtaatcaagg gttgaaaagc aaggtaaacg gcaagctgga tatatacgaa
      721 gacaaaagcc gcgacaattc gcccatttat aaattgccgg atcagccttg gttgggcgtg
      781 tctttcaatt taagcagcga gagcgtcgtc gaatcaaaga aactcaagaa agtggaatct
      841 tcttttagcg aggatgtgac gcagagcaat ggtgcgcaaa gcctatacaa atacaaaaac
      901 ctcgtttata cgacaggcga tgttcgtaat aagggtaatc aagttcatca ggacaaacac
      961 cacgctgtcg ccttttatct gaacgccaag ctgcacttgc tggataaaaa aaacatccaa
     1021 aatatcgcgc aaggcataac agttaatttt ggtaccttga aaacacgcat cgagccgacg
     1081 gacacgtgga agaacaagag gcatctcact cataatgttg gtaattggga gttcaaagat
     1141 accggatcag tcagcgtcaa actcaaattg ccggaagtca aagcaggccg ctgcatcaac
     1201 gcaaataacc ccaataagag taccaaagcc ccttcccccg ccctgaccgc ccccgcgctg
     1261 tggttcggac ctgtgcaaaa tggtaagg
//
LOCUS       DAXHRP010000258         1282 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.258, whole genome shotgun sequence.
ACCESSION   DAXHRP010000258 DAXHRP010000000
VERSION     DAXHRP010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.258"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(122..550)
                     /locus_tag="ACFM72_002101"
     CDS             complement(122..550)
                     /locus_tag="ACFM72_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HFC6258599.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(531..965)
                     /locus_tag="ACFM72_002102"
     CDS             complement(531..965)
                     /locus_tag="ACFM72_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HFC6258600.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKASGDDGVRKS"
     gene            complement(1118..>1282)
                     /locus_tag="ACFM72_002103"
     CDS             complement(1118..>1282)
                     /locus_tag="ACFM72_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFC6258601.1"
                     /translation="EPLIRDFHQRPLSEGKPYKVAVTACMRKLLTISNARMRDYFAEN
                     DTAENGIRTA"
BASE COUNT          337 a          374 c          240 g          331 t
ORIGIN      
        1 tttgaaaacc ccattaaacc gtctttaacc catcgtcccg aacggtagat gtttcacccc
       61 tgcaaaccaa aaaaaagacc gtctgaatac agacggccaa agcctggtca cacatcactg
      121 cctaaaataa agctgcctgc tgtgccgcag gtcggctcat ttcattgata atcgtatatc
      181 ccgttcgtga agagatgccg tatttagggc atagcttcgt catcgccata agcccgctct
      241 ccttatcaat atcgcgcaat ttgacaaact cctgataaaa cctatggttt ctcaactgta
      301 ttaacgcctt gccgcaccgt gggacataca attcctcgcc accatatacc tgcaacagct
      361 catgtgtttt cacttcgccg atggcttcga ccaaaattgc caaacgctcg gtgtccacct
      421 tgcccttacc aaatttaaac cgcgccccgc caatcgcctt gaccagctgt tccgtcgctg
      481 ccagtccgat gacatccaca atgtccaaca cggtatccgg caataaatgt tcaacttttt
      541 cgaaccccat catccccact cgctttttcc gttttcctgt tttccgcaat ctgcaacgca
      601 gcaaccagtt tatgtagctg cgtatcgtct aaatattcga ccttatcctt accaaacatc
      661 cgccgcgcca ttgcgtgtgc atagttccaa tgtttgccgc cgacggtcag cagggcttcg
      721 actttgtcca acattgccgc tgatgatgtc cgacgcagat gtggtttacc gtgtgggtta
      781 ccttttgctt taggcttaaa tccgtgcgac cgcatatcag cgacaacaga ctcaagttcg
      841 gaaacatcca tatccgcaca cgaccgcttg cccgtcacac gctccaacac cgcgcgatag
      901 gtaccgtcat ccaagcccag ctccttttga gcaatcttaa ttttcgcaat caacgcccgg
      961 cgcattatct ctccaataca acatatagta taaattagtg tatattatac caataaaata
     1021 caatatatag tattaagacg atgtttttgc gaaacggaca ggcataaaaa agcaactata
     1081 tttttcaccc cgtcgggcaa aaataccaaa actcaaatca agccgtccga ataccgtttt
     1141 cggcggtatc gttttcggca aaataatcac gcatccgggc attcgatatc gtcagcagtt
     1201 tgcgcataca tgccgtaacg gcaaccttat acggcttacc ctcggacagc gggcgttggt
     1261 ggaaatcccg aataagcggt tc
//
LOCUS       DAXHRP010000259         1276 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.259, whole genome shotgun sequence.
ACCESSION   DAXHRP010000259 DAXHRP010000000
VERSION     DAXHRP010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.259"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            114..338
                     /locus_tag="ACFM72_002104"
     CDS             114..338
                     /locus_tag="ACFM72_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258602.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQESSGKTEEPSYFLMFMFL
                     NLLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            426..848
                     /locus_tag="ACFM72_002105"
     CDS             426..848
                     /locus_tag="ACFM72_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="wall-associated protein precursor"
                     /protein_id="HFC6258603.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAALWFAPVLAGGGRFALTGFTRHGLNQAISRGGVGVSNKAIMNTMR
                     NPTKITSQSGGRTRFTGADGGVVLNSQGKVITTWGKPR"
     gene            894..1142
                     /locus_tag="ACFM72_002106"
     CDS             894..1142
                     /locus_tag="ACFM72_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258604.1"
                     /translation="MNIKNEIVALISKKIDGGQYSSLENFALSVLREKIIKNTVSSDE
                     KLLIINDFLSGFLEFDPETGKPVGETLKIEQMIDFFLV"
BASE COUNT          411 a          214 c          263 g          388 t
ORIGIN      
        1 aggcaacgct gtactggttt ttgttaatcc actatatatt tatctgatat atcaacatct
       61 ctctatctta ttccgaattt tattgttgaa acttgcatga aaaaccatac aagatgatga
      121 aaaacaaata tattttaata aaagcagcaa tcggcataac cgccatatct atattttatc
      181 ttctaactca agaaagcagc ggcaaaactg aagaaccatc atatttcttg atgtttatgt
      241 ttctcaactt gctttggttt gaagaaaata aaacagttat ggctgccgtt acggcaatga
      301 ttgccgccca ctttatattt gtcgcactat ccgattaata agcaatcaaa aaggctgctt
      361 ggaaatttca ggcagccttt caggaggatt ttgatggaac attatctcct ccctaagaat
      421 ttgttatgaa aaaacaaatc accgcagccg taatgatgct gtctatgatt gcccccgcaa
      481 tggcaaacgg cttggacaat caggcatttg aagaccaagt gttccacacg cgggcagatg
      541 cgccgatgca gttggcggag ctttctcaaa aggagatgaa ggaaactgag ggggctgcat
      601 tatggtttgc tcccgtgttg gcaggtggtg gcagatttgc actgacagga tttactcggc
      661 atggtttaaa tcaggctatt tctcgtggtg gtgtgggagt ttcaaataaa gcgattatga
      721 acactatgcg taaccctaca aaaattacaa gccaatcagg aggaagaacc cgttttacag
      781 gagctgatgg tggtgttgtt ttgaatagtc aaggtaaagt aattactaca tggggcaaac
      841 ctcgttaatc aaaaaaaggg ggctttgccc cttttataac ttaagggtaa tttatgaata
      901 ttaaaaatga aatagttgct ttaatttcta aaaaaattga tggggggcaa tatagttctt
      961 tagaaaattt tgctttatcc gtactaaggg aaaaaattat aaaaaatact gtttccagtg
     1021 atgaaaaatt attgattatt aatgattttt tatcaggttt tcttgagttt gatcctgaga
     1081 ccgggaaacc tgtcggggag acgcttaaaa ttgagcaaat gattgatttc tttttagtct
     1141 aaatcataca taccagtgaa caagctaggc gtatatccgg cttttaaata cgattgtcag
     1201 gtttatactt gggataaaat caaaaataaa gttgtttaaa ctctagtaga ttaacaaaaa
     1261 tcaggacaag gcgacg
//
LOCUS       DAXHRP010000260         1272 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.260, whole genome shotgun sequence.
ACCESSION   DAXHRP010000260 DAXHRP010000000
VERSION     DAXHRP010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.260"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            41..373
                     /locus_tag="ACFM72_002107"
     CDS             41..373
                     /locus_tag="ACFM72_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258605.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDMPPGIPCFWVEGAESLEELCAMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            705..1214
                     /locus_tag="ACFM72_002108"
     CDS             705..1214
                     /locus_tag="ACFM72_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HFC6258606.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGATQYGKTNSTV
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          339 a          242 c          304 g          387 t
ORIGIN      
        1 accttgtttt gacggaaaac catcatataa aggaacactt atgcagattt tatcttttca
       61 accggacatt gcggaacgta tgctggaagg tacggaaggc gagtcggtca acgaaaacgc
      121 acaattcgtc cgtacggaca acggctattg gattgcgtgg catgaaggcg tagcggcact
      181 gcttgcgccc gatatgccgc cgggcattcc ctgtttttgg gtggaaggcg cggaaagcct
      241 tgaagagttg tgcgccatgg tggaacgcgg cgagtttgac gaagtggaag agtttgacgg
      301 cgatgacgac gaatggctcg aaacggcaca gggttgcggg caccacggcg acgcttgcgc
      361 ctgcggacat taaaggcatt gcaggcttgc cgcaaggggt gcaaggcttt gccgtttttt
      421 aaataatcgg tggattgcat ctgtttgcaa tgggcggaac gcttcccttt gtattttatt
      481 gaataaaaaa acttatcttg gtattataat taaggtagca tcaattattt tgggatggca
      541 ataaacgcaa agcattgatt tgcgccgatt gcagacttat tatagcaggt tgcggcgcgg
      601 acttaatggg aattgtttat agagcatgat ggtctgaaac atcattaatt aaaaatacca
      661 ttaatccgat ttatatttat ttcaatttca atggaaaaac atcaatgaca atgattttaa
      721 gcattttaag cctgtttttt atcatcagac tgttattttt agccgtctct attaaacatg
      781 aaaaagcctt gattgccaaa ggggcaacgc aatacggaaa aaccaattcc acagtgcttg
      841 cggcagttca tacgctttat tatttggcgt gttttgtttg ggtatggctt tctgacactg
      901 cttttaatgg catatccttg attggtacgc tgacggtgat ggcttcgttt gtgatattgt
      961 cattgattat taagcagttg ggggagattt ggacggttaa aatctatatt ttaccaaatc
     1021 atcaaattaa tcgttcgtgg ttgtttaaaa cattccgcca ccccaattat tttttaaaca
     1081 tcatacccga actgattggc atcgccttat tatgtcaagc gtggtatgtt ttattgattg
     1141 gcctgccgat ttatttgctg gtcttattta agcgtatccg acaagaagaa caggcgatgg
     1201 caacactttt ttaacccgtt tcatcaatta tagcggatta acaaaaacca gtacggcgtt
     1261 gcctcgcctt gc
//
LOCUS       DAXHRP010000261         1259 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.261, whole genome shotgun sequence.
ACCESSION   DAXHRP010000261 DAXHRP010000000
VERSION     DAXHRP010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.261"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(86..1189)
                     /gene="dnaN"
                     /locus_tag="ACFM72_002109"
     CDS             complement(86..1189)
                     /gene="dnaN"
                     /locus_tag="ACFM72_002109"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HFC6258607.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERASILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
BASE COUNT          285 a          350 c          341 g          283 t
ORIGIN      
        1 ctttccgaca gccgaacaaa accccgaatc cgtctgcacg gttcggggta tatctccaat
       61 acgggcatcg tgttccggaa aaccgtcaaa tccgcatcgg catcacaata tatttgaaat
      121 tcggattgtt cggcacggta aacagcgtcg agcggttggc atcgccgaag gcaagctgca
      181 tatcgtcgga atggatgttg cgcaacacgt ccatcagata gccgatattg aaaccgactt
      241 cgagttcgcc gccctgatag gcgatttcga tttcttcgcg cgcttcttcc tgctcgttgt
      301 tgctgcacac aacgctcaac aggccgggtt gcaaaaacaa tcgcgcaccg cggaattttt
      361 cattggcaag aatcgatgca cgttccaacg cgcccaacaa ttctgccctc gacaacacga
      421 aaatcttgtc gttgtccaaa ggaatcacgc ggttgaaatc ggggaatttg ccgtcgatga
      481 ccttgctgac gatggtcgtg ccgttgcatt ggaaacgcac ctgtttgtcc agcagctcga
      541 tttgaatcgg atcgtcgggg ttgttcaaca gtttgaacag ttccagcacc gttttgcgcg
      601 gcaaaatcac ttcggcgcgc ggcaaatccg catcaatcgc gcaggctgca taggcaaggc
      661 ggtgtccgtc ggtcgccaca aggcgcaact ggctgccctc aacctgcatc agcagaccgt
      721 tgagataata gcggatgtcc tgcaccgcca tgctgtactg cacttgcgac agcatggttt
      781 tgaaacgctc ctgctccagc gagaaagtcg cgctgatgtc ctcgccgaca ttcatcatcg
      841 gaaaatcggc ggcaggcagg gtctgcaggg caaaacgcga tttgcccgcc ttcagcgtca
      901 gacggctgtc gtcccaatcc agcgacacca gcgcaccggc aggcagcgcg cgcaaaatgt
      961 cctgaaattt cttggcattg gtggtgatgc ggaagtcgcc cgcgccgccc tcgggacccg
     1021 cagtgtcgat ttggatttcc aaatcggttg ccaagagttt ggtctgaccg ccttttccct
     1081 caatcaggac gttggacagg atgggcaggg tgtggcggcg ttcgacaatg ccggtaacgg
     1141 cttgcaacgg cttgagcagg ctgtcgcgct cggcttgtaa aatcaacatg ttcgctcctt
     1201 taaatcggtt tgtatagtgg attaaattta aatcaggaca aggcgacgaa gccgcagac
//
LOCUS       DAXHRP010000262         1251 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.262, whole genome shotgun sequence.
ACCESSION   DAXHRP010000262 DAXHRP010000000
VERSION     DAXHRP010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.262"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..387
                     /locus_tag="ACFM72_002110"
     CDS             <1..387
                     /locus_tag="ACFM72_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC6258608.1"
                     /translation="AILLAEGQKSAVTEYYLNHGEWPGNNSSAGVATSANIKGKYVEK
                     VEVAKGVITATMLSTGVNNEIKGKKLSLWAKRQNGSVKWFCGQPAQRAGTDSDTDVKA
                     DTSANGKQIDTKHLPSTAPTRKSTPN"
     gene            776..1195
                     /locus_tag="ACFM72_002111"
                     /pseudo
     CDS             776..1195
                     /locus_tag="ACFM72_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251873.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          390 a          365 c          268 g          228 t
ORIGIN      
        1 gccattcttt tggctgaagg tcaaaaatca gccgtcaccg agtattacct gaatcacggc
       61 gaatggcccg gcaacaacag ttctgccggc gtggcaacct ccgccaacat caaaggcaaa
      121 tatgttgaga aagttgaagt cgcaaaaggc gtcattaccg ccacaatgct ttcaaccggc
      181 gtaaacaacg aaatcaaagg caaaaaactc tccctgtggg ccaagcgtca aaacggttcg
      241 gtaaaatggt tctgcggaca gccggctcag cgcgccggca ccgacagcga caccgacgtc
      301 aaagccgaca cctccgccaa cggcaagcag atcgacacca agcacctgcc gtcaacagca
      361 ccgacaagaa aatcgacacc aaactagaga aaccgttttc ccgataagtt tccgtaccga
      421 caaggctgga ttcccgcctg cgcgggaatg acggcggagc ggtttctgtt gctcccgata
      481 aattcctaaa acttaaattt tcatcattcc cacaaggata gaaaaccaaa aacagaaacc
      541 taaaattcat cattccctca aaaacagaaa accaaaaaca gaaacctgaa attcgtcatt
      601 cccgcgcagg cgggaatcca gtgcgttgag cttcagctat ttagaataaa ttttgaaact
      661 ctaatcccgt cattcccacg aaagtgggaa tctagaacgt aaaatctaaa gaaaccgttt
      721 tacccgataa gtttccgtac cgacagacct ggattcccgc ctgcgcggga atgacgaagc
      781 gatccttttg gctgaaggtc aaaaatcagc cgttaccgag tattacctga atcacggcga
      841 atggcccgcc aacaacagtt ctgccggcgt ggcaacctcc gccgacatca aaggcaaata
      901 tgttaaaagc gttgaagtca aaaacggcgt cgttaccgcc caaatggctt caagcaacgt
      961 aaacaacgaa atcaaaggca aaaaactctc cctgtgggcc aagcgtcaag ccggttcggt
     1021 aaaatggttc tgcggacagc cggttgcgcg caacgccaac aacgccgacg ccgtcgccgc
     1081 cgccaagacc ggcaccaaca aaatcgacac caagcacctg ccgtcaacct gccgcgacgc
     1141 agcatctgtc gtttgcatag aaacaccacc tacggctttc tataaaaata cctaaaccgt
     1201 cattcccacg aacctacatc ccgtcattcc cacgaaagtg ggaatccaga a
//
LOCUS       DAXHRP010000263         1198 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.263, whole genome shotgun sequence.
ACCESSION   DAXHRP010000263 DAXHRP010000000
VERSION     DAXHRP010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.263"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(693..>1198)
                     /locus_tag="ACFM72_002112"
     CDS             complement(693..>1198)
                     /locus_tag="ACFM72_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6258609.1"
                     /translation="NGRTGRILNSLLLIEKGLLDLPILYLSRYIIENRADYYRLLLGV
                     TERQDWESWIIYILDGVADTADWTVSKIDAIRCLFEQTRQHIRTHAQGIYTHELVNLL
                     FEQPYTRIANLEAAGIAKRQTASKYLKELSDIGVLQEIVIGRDKLFIHPRLMELLRGE
                     GNSFTSF"
BASE COUNT          310 a          243 c          280 g          365 t
ORIGIN      
        1 tttaaaattt ttatattcac atagatgggg atgatgggat ttaggattct gattttgttt
       61 ttgagagaat gaaggaattt gagattgtgg gcgattatcg ggaaaaatag aatctttccg
      121 ccgtcattcc cgcgcaggcg ggaatctaga cattcaatgc taaggcaatt tatcgggaat
      181 gactgaaact caaaaaacta gattcccact ttcgtgggaa tgacgggata taggtttcca
      241 tgcggacgcg ttcggattca cgactgcgcg gaaatgacgg gattttggtg tattccctaa
      301 aaaaataaaa aaacatttgc aactttgtta aaaataaagg ctgtgtttta acgatgtgtt
      361 gatatttaat tttagaaagg tagctattta atagttacct tttcttattt aaaaatagct
      421 ttctcaaatt ccatgaacgc ctcaatacga tatgcagatg ctctatcgaa attaaggttc
      481 aacattttgt ttattaaaca ttttatttta gccattttca atataccccc aaatataccc
      541 ccaatttgca caagtcaaaa ttttaggcag gggttttgtt gctcccatga tacgcgggcg
      601 gatgccggct tttcgcgggg gaaatacaag gggtctcggt tcgggtgtca aaatccctgt
      661 ttcgtgttag tcatgtgggg gggaagaggg ggttagaatg aagtaaagct gttgccctct
      721 ccccgcaata gttccattag gcgcggatga atgaatagtt tgtccctgcc gatgacgatt
      781 tcttgcagca cacctatgtc tgaaagctct ttcaggtact tagaggccgt ctgccgtttg
      841 gctatccctg ccgcttctag gttggcaatg cgtgtatatg gctgctcaaa cagaagattt
      901 accagttcgt gcgtgtagat tccttgtgcg tgtgtccgta tgtgttgacg tgtctgctcg
      961 aacaggcagc gtatcgcatc tattttcgat accgtccaat cggcggtgtc ggctacgccg
     1021 tctaagatgt agattatcca gctttcccaa tcctgccgtt cggttacgcc taaaagcagg
     1081 cggtaatagt ccgccctgtt ttcgatgatg tagcggctca aatacaaaat aggcaaatcc
     1141 aaaagccctt tttcaatcaa tagcaggctg ttcaatatgc gccccgtccg cccgttgc
//
LOCUS       DAXHRP010000264         1169 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.264, whole genome shotgun sequence.
ACCESSION   DAXHRP010000264 DAXHRP010000000
VERSION     DAXHRP010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.264"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>1169
                     /locus_tag="ACFM72_002113"
     CDS             <1..>1169
                     /locus_tag="ACFM72_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC6258610.1"
                     /translation="AYDKWDYKQEGLTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGS
                     STAAAATTTAAATTTVSTAAAMQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTV
                     KQIVTSALTAGALNQMGADIAQLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISA
                     GINTAVNGGSLKDNLGNAALGALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSG
                     LVQGKCKDGAIGAAVGEIVAESILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGD
                     VNTAANAAEVAVVNNALNFDSTPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNP
                     QDKDAAIWISNIRNGITGPIVITSYGVYAAGWTAPLIGTAGKAAISTCMANPSGCT"
BASE COUNT          335 a          278 c          311 g          245 t
ORIGIN      
        1 gcctacgaca aatgggacta taaacaggaa ggcttgaccg gagccggtgc agcgattgtg
       61 gtgattattg taaccgctct aacttatgga tacggagcgg ctgcagcggg tagcgtaact
      121 gccgcaggaa gtagtacagc cgcagctgca acaacgacag cggcagcaac taccactgtt
      181 tctactgcag ctgccatgca aaccgcagct ttagcctcct tgtatagcca agcagctgta
      241 gccatcatca ataataaagg cgatgtaggc aaagcattaa aagatctcgg caccagtgat
      301 acggtcaagc agattgttac ttccgcactg acggcgggtg cattaaacca gatgggcgca
      361 gatattgccc aattgaacag caaggtaaga accgaactgt tcagcagtac gggcaatcaa
      421 accattgcca accttggagg cagattggcc accaacctca gcaatgcagg tatctcagct
      481 ggtatcaata ccgccgttaa cggcggcagc ttgaaagaca acttaggcaa tgccgcattg
      541 ggagcattgg ttaatagctt ccaaggggaa gccgccagca aaatcaaaac aaccttcagc
      601 gacgattatg ttgccaaaca gttcgcccac gctttggcgg gttgtgttag cggactggta
      661 cagggaaaat gtaaagatgg ggcaattggc gcagcagttg gggaaatcgt agctgaatcc
      721 atacttggcg gcagaaaccc tgctacactc agcgatgcag aaaagcataa agttatcagt
      781 tactcgaaga ttattgcggg cagcgtggcg gcactcaacg gcggcgatgt gaatactgcg
      841 gcgaatgcgg ctgaggtagc tgtggtgaat aatgctttga attttgacag tacccctacc
      901 aatgcgaaaa agcatcaacc gcagaagccc gacaaaaccg cactggaaaa aatcatccaa
      961 agtattatgc ctgcacatgc ggcaggtgcg atgactaatc cgcaggataa ggatgctgcc
     1021 atttggataa gcaatatccg taatggcatc acaggcccga ttgtgattac cagctatgga
     1081 gtttatgcag caggttggac agctccgctg atcggtacag ctggtaaagc agctatcagc
     1141 acctgtatgg ctaatccttc tggttgtac
//
LOCUS       DAXHRP010000265         1161 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.265, whole genome shotgun sequence.
ACCESSION   DAXHRP010000265 DAXHRP010000000
VERSION     DAXHRP010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.265"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..576
                     /locus_tag="ACFM72_002114"
     CDS             <1..576
                     /locus_tag="ACFM72_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258611.1"
                     /translation="EAGAGIVTGAVTVGNAWEAPVGALSKAKAAKQAAPKETINNLAN
                     LAKAEQQILFRIAQRDTQLDAWKTGFNNRVRKGAGLLDASNIPITINGKTIKPVQAIS
                     LKGAPVYSGVSEQEIFALYRQMTGQNPNFRVLPDGRLANGIISTGEWAGTKIALRNFS
                     KTENSTQARWTLDLQNPPSFIKGTKLELKFQ"
     gene            595..969
                     /locus_tag="ACFM72_002115"
     CDS             595..969
                     /locus_tag="ACFM72_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HFC6258612.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
BASE COUNT          387 a          213 c          254 g          307 t
ORIGIN      
        1 gaagcgggcg cgggaatcgt cacgggtgcg gtaacggtag gcaacgcttg ggaagctcca
       61 gtaggagcgt tgtcgaaagc gaaggcggct aagcaagctg ctcctaaaga aacaataaac
      121 aatttggcaa atttagccaa agcagaacag cagattttat tccgtattgc ccaacgcgat
      181 acgcaactgg atgcatggaa gacgggattt aacaatagag taaggaaagg agcaggcttg
      241 cttgatgcaa gtaatattcc gataaccatt aacggaaaaa ccatcaaacc tgtacaagcc
      301 ataagcttaa agggagcacc cgtttacagc ggcgtaagcg aacaggagat ttttgcgctt
      361 tatcggcaga tgactggcca gaatccgaat tttagagttt tgcctgacgg aagattagca
      421 aatggcatta tcagtactgg agaatgggca ggaacaaaaa ttgcattaag aaatttttca
      481 aaaacagaga attcaactca agcacgatgg acattagatt tgcagaatcc tccatcattt
      541 attaaaggta ctaaattgga gcttaaattc caataattta caaaggattt taccgtggat
      601 gagaaacaaa aaattaagat tcttgatttt caaatcgatt tatcctcaat ttttaactct
      661 tataaaaatc aaatgggtat taatattcaa gataaaaact taaaaaacaa tttctgttct
      721 tttatggaag aactgttaaa tgacggttca atccgtttac atgattatac cgacggtatc
      781 ggaattcctc taactggaac ttcaaaagaa caagtgcaga aattgaaaga catatggcct
      841 actttggaag atgcccaagc aatatggcct gaagaccctt ggtattactt agaatggctt
      901 tggtgggata ttgcgtgtcc aatagatttg gccgatttgc cgaatattga tatttatgag
      961 caagcgtagg tatggttagc cgcctttagc ggcgtaaccg tacgcatatc agcaaacttt
     1021 ataaaataac aaggccgtct gaaatctgtt tttcaacttt ttcagacggc cttgcaactt
     1081 ggcatttcat tcgtacggtt acgccgctaa aggcggctaa ccgtacctac gagctctgat
     1141 aaaaatgatt tatggaagca a
//
LOCUS       DAXHRP010000266         1160 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.266, whole genome shotgun sequence.
ACCESSION   DAXHRP010000266 DAXHRP010000000
VERSION     DAXHRP010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.266"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            53..745
                     /locus_tag="ACFM72_002116"
     CDS             53..745
                     /locus_tag="ACFM72_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC6258613.1"
                     /translation="MQADLAYAAERITHDYPQATGANNTSTVSDYFRNIRAHSIHPRV
                     SVGYDFGGWRIAADYASYRKWNNNKYSVNTKEVERNNTSGNWKELKTENQENGSFHAA
                     SSLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVKHQVHSVKKETTTTFLAPTGDAKVP
                     GKIVEGPFSKPAYHESHSTSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFK
                     THEVSLGMRYHF"
BASE COUNT          318 a          335 c          272 g          235 t
ORIGIN      
        1 ctcttccgca gcgcaggcgg caagtgaaga cggcagccgc agcccgtatt atgtgcaggc
       61 ggatttagcc tatgccgccg aacgcattac ccacgattat ccgcaagcaa ccggtgcaaa
      121 caacacaagc acagtaagcg attatttcag aaacatccgt gcgcattcca tccacccccg
      181 ggtgtcggtc ggctatgatt tcggcggctg gaggatagcg gcagattatg ccagttacag
      241 aaaatggaac aacaataaat attccgtcaa cacaaaagag gtggaaagaa acaataccag
      301 tggcaactgg aaagaactga agacggaaaa tcaggaaaac ggcagcttcc acgccgcttc
      361 ttctctcggc ttatccgcca tttacgattt caaactcaac gataaattcg ataaattcaa
      421 accctatatc ggtgtgcgcg tcgcctacgg acacgttaaa catcaggttc attcagtgaa
      481 aaaagaaacc acgactactt tccttgcacc aacgggagac gctaaagtgc caggcaagat
      541 cgtagaaggt ccgttcagca aacctgccta tcacgaaagc cacagcacca gcagcttggg
      601 tcttggtgtc atcgccggtg tcggtttcga catcacgccc aagctgactt tagacaccgg
      661 ataccgctac cacaactggg gacgcttgga aaacacccgc ttcaaaaccc acgaagtctc
      721 attgggcatg cgctaccact tctgattccc cgataccgat gccgtctgaa ccttcagacg
      781 gcatttttga tgcactcgcc gtttacaggc gcggggcggg cgtggaaata cccgaaccgt
      841 cattcccgac aacaccgtaa tcttgaaatc cgtcattccc gcacaggcgg gaatccagac
      901 ccctgacgcg gcgggaatct atcggaaatg actgaaaccc cgggattcta gattcccact
      961 ttcgtgggaa tgacgtggtg caggtttccg tatggatgga ttcgtcattc ccgacaacac
     1021 cgcaatcttg aaacccgtca ttcccgacaa cactgcaatc ttgaaacccg tcattcccgc
     1081 gcaggcggga atccagaccc cctgacgcgg cgggaatcta tcggaaatga ctgaaacccc
     1141 gagattctag attcccactt
//
LOCUS       DAXHRP010000267         1126 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.267, whole genome shotgun sequence.
ACCESSION   DAXHRP010000267 DAXHRP010000000
VERSION     DAXHRP010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.267"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(229..1083)
                     /locus_tag="ACFM72_002117"
     CDS             complement(229..1083)
                     /locus_tag="ACFM72_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC6258614.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT          314 a          338 c          294 g          180 t
ORIGIN      
        1 ccgtcattcc cgcgcaggcg gaaatccgga catccaacgc tgcagcaatt tgtcggaaat
       61 aaccgaaact caaaaaaccg gatgcccgcc tgcgcgggaa tgacgacgca aagatggtcg
      121 ttatttcgga taaatatccg tcttttcgtt ccggataccc gctttcgcag gaatggagat
      181 ggaaagattt cagcctattc ggcaatcatc aaataccgct tcccaacttt atttttgatg
      241 cgacagccgg ccggcaacca aggtggcggc gatgacgaca aacacgccca aggcggacac
      301 gggcgacagg tgttcgccca aaatcaaaac cgccagcagc acgccgacga cgggttcgag
      361 cgaaatcaac agtcccgaaa cattggcagg aacacggctc atccccttgt tccacagcca
      421 ataggcgtac cagccgcacc ccaaacccaa atacagcagc gacaatacca tcccgacgct
      481 ccagtccacg gtataacttt gcgccaaagc aagcgaaaac ggcaggcaca tcaacgatgc
      541 ggcggcaatg gaaacagatg tgaatgccgg tgcgccgatg cgtgcaatca gcctttgcgt
      601 cggacgcata gcggcacaaa agcccgcgcc cgccaacaac accagcaggc agccgaacca
      661 gccgacttcg ccgccctctt ccgcaccgcc cgccatcagc agcgcgacac cggcaaatgc
      721 cgccgcgccg catatccagt ggtaggcacg cgctttgtcg ttgaagaaaa agtgtccgac
      781 aaacaccatc agcagcggct cgagtccgac aatgaccgat gcgctggcgg cggaagtgta
      841 tttcaacccg acaaactgaa gcagcagggt cagcacatag ttgacgaacg acacaatcag
      901 caacggcttc cattcctcac gcggaatctt gccgacatga cggcggcagg cgggcagtgc
      961 aggcagcgcg gcaattagca ggcgcacgcc gaccatcaat gcgggatcga tgccgccata
     1021 gacatatttg gcggcaataa acgagctgct ccagataatc agggcaagga tttggtaaaa
     1081 catagtgagt gataaagtca gatggtcata caaaagtata gcggat
//
LOCUS       DAXHRP010000268         1085 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.268, whole genome shotgun sequence.
ACCESSION   DAXHRP010000268 DAXHRP010000000
VERSION     DAXHRP010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.268"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            3..338
                     /locus_tag="ACFM72_002118"
     CDS             3..338
                     /locus_tag="ACFM72_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258615.1"
                     /translation="MAVSHHQGYKSAFAKQQAVIDKMERDKAQALLLSAQNYARELEL
                     ARAEAKKYEVKAHAVGMALAKKQAEVSRLKTERDLCKIPFPPDSRNPNTGFRLFSPQI
                     PPNFTQIPP"
     gene            complement(380..>1085)
                     /locus_tag="ACFM72_002119"
     CDS             complement(380..>1085)
                     /locus_tag="ACFM72_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC6258616.1"
                     /translation="STLCRYRNWLAQDDTLSELLKLINRQLTEKGLKVEKASAAVVDA
                     TIIQTAGSKQRQAIEVDEEGQISGQTTPSKDKDARWIKKNGLYKLGYKQHTRTDEEGY
                     IKKLHITPANTHECKHLLPLLEGLPKGTTVYADKGYDSEENRQHLKEHQLLDGIMRKA
                     HRNRPLTEAQTKRNRYLSKTRYVVEQSFGTMHRKFRYARAAYFGLSKVSAQSHLKAMC
                     LNLLKAANRLSAPAAA"
BASE COUNT          223 a          281 c          289 g          292 t
ORIGIN      
        1 gcttggctgt gtcgcaccat caaggctaca agtcggcatt tgcgaagcag caggcggtca
       61 tcgacaagat ggagcgcgac aaggcgcaag ccctgctgtt gtcggctcaa aactatgcgc
      121 gcgaactgga actggcacgc gcggaagcta aaaaatatga agtcaaggcg cacgctgtcg
      181 gcatggcttt ggcgaaaaaa caggcggaag tcagccgtct gaaaacggaa agagaccttt
      241 gcaaaattcc tttccctccc gacagccgaa acccaaacac aggttttcgg ctgttttcgc
      301 cccaaatacc gcctaatttt acccaaatac ccccttaatc ctccccggat acccgataat
      361 caggcatccg ggctgctttt taggcggcag cgggcgcact tagcctgttg gccgctttca
      421 aaaggttcaa acacatcgcc ttcagatggc tttgtgcact cactttgctc agcccgaaat
      481 aggctgcccg cgcatagcgg aatttacggt gcatcgtacc gaagctctgt tcgaccacat
      541 aacgggtctt cgacaaatat cggttgcgtt tggtttgcgc ttccgtcagc ggacggttgc
      601 ggtgggcttt gcgcataatg ccgtccaaca actgatgttc tttcagatgt tgccggtttt
      661 cctcactgtc atagccttta tcggcataga cggtcgtacc tttgggtaac ccttccaaca
      721 aaggcaacag gtgtttgcac tcatgggtat tggctggggt gatgtgcagt ttcttgatat
      781 agccttcctc atcggtacgg gtatgttgtt tgtaaccgag tttgtagagg ccgtttttct
      841 ttatccaacg ggcatctttg tccttactcg gtgtggtttg gccgctgatt tgtccttctt
      901 catcgacttc tatggcctga cgctgtttgc tgccggcggt ctgaataatg gtggcgtcaa
      961 cgacggcggc ggatgctttc tctactttta ggcctttttc ggtcagttgt cggttaatca
     1021 gtttgagcaa ttcggacagg gtgtcgtctt gcgccagcca gttgcggtag cggcataagg
     1081 tgctg
//
LOCUS       DAXHRP010000269         1082 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.269, whole genome shotgun sequence.
ACCESSION   DAXHRP010000269 DAXHRP010000000
VERSION     DAXHRP010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.269"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            284..721
                     /locus_tag="ACFM72_002120"
     CDS             284..721
                     /locus_tag="ACFM72_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VapD"
                     /protein_id="HFC6258617.1"
                     /translation="MSRYLITFDMDTNCLKDNYHGNNYTNAYSDIKTILARHGFENIQ
                     GSVYLGREGISEAHGTIAIQELTARFDWFYSCISNIKFYRLESDLNAQFIADGVYQAK
                     QAFLQRVEQLRISLTEAGLSDEQINQVLEKQKFELESPNLKLN"
BASE COUNT          338 a          248 c          219 g          277 t
ORIGIN      
        1 gccaccaaaa cccttgctag ctaagggtta aacagctcac ttgaaatcta cttaagtcta
       61 atctaaacta tccaatatgg atagattttt aaacataggg caagcagcaa aattattgta
      121 gctgaaagca caatcactcg ctggtggtct caaacacgtg ccgactacct cgccgaaaac
      181 actatcagcc gcgataaacc gtgggaaaag ctcgttatca gccgccgcac ttggtactat
      241 cgcgggaaac cgatgctgtc tgaaacgcaa caggagaaaa ataatgagcc gttacctgat
      301 tacctttgat atggatacca actgcctgaa agacaattac cacggaaata actataccaa
      361 tgcctactcc gatattaaaa ccatcttggc tagacatgga tttgagaaca ttcagggcag
      421 tgtttatcta ggccgtgaag gcatcagtga agcacacgga acaatagcca ttcaggaact
      481 gaccgctcgg tttgattggt tttactcctg tatttcaaac attaagtttt accgccttga
      541 aagtgatttg aacgcacaat ttatcgctga tggtgtgtat caagccaaac aggctttcct
      601 tcaacgtgtt gaacaacttc gtatatccct aacagaagct ggattgtctg atgagcaaat
      661 caatcaggtt ctggaaaaac agaaatttga attggaaagt cctaacctga aattaaatta
      721 acctccttta ctcaccaaca tccgccgcag ctctgtcagt ttttggcgcg ctgcggcgat
      781 ttctgtgcgt tttagagctt cgggtagggt gtgaaacaac tcactcgaaa tttacttaag
      841 tctaatctaa actatccaag cagtaattag tacaaaaaag gcaaacttat tttaggagct
      901 taaaattgca gccgcgataa accgtgggag agtctcggca tttcccgcgc cacttggtac
      961 aaacgtggca aaccgatgcc gtctgaaacc gtacaacagg agacaaaata atgcttgctc
     1021 aaatcgaact cacaccctgc cagctaatgg tttacgtaac ttaaggttac tggatttacg
     1081 ca
//
LOCUS       DAXHRP010000270         1002 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.270, whole genome shotgun sequence.
ACCESSION   DAXHRP010000270 DAXHRP010000000
VERSION     DAXHRP010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.270"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>1002
                     /gene="tuf"
                     /locus_tag="ACFM72_002121"
     CDS             <1..>1002
                     /gene="tuf"
                     /locus_tag="ACFM72_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFC6258618.1"
                     /translation="EEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQ
                     MDGAILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRD
                     LLSSYDFPGDDCPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLP
                     IEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAG
                     DNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQ
                     FYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV
                     "
BASE COUNT          259 a          275 c          267 g          201 t
ORIGIN      
        1 gaagaaaaag ctcgtggtat taccattaat acctcacacg tagaatacga aactgaaacc
       61 cgtcactacg cacacgtaga ctgcccgggg cacgccgact acgttaaaaa catgattacc
      121 ggcgccgcac aaatggacgg tgcaatcctg gtatgttccg cagccgacgg ccctatgccg
      181 caaacccgcg aacacatcct gctggcccgc caagtaggcg taccttacat catcgtgttc
      241 atgaacaaat gcgacatggt cgacgatgcc gagctgttgg aactggttga aatggaaatc
      301 cgcgacctgc tgtccagcta cgacttcccc ggcgatgact gcccgattgt acaaggttcc
      361 gcactgaaag ccttggaagg cgatgccgct tacgaagaaa aaatcttcga actggctgcc
      421 gcattggaca gctacatccc gactcccgag cgagccgtgg acaaaccgtt cctgctgcct
      481 atcgaagacg tgttctccat ttccggccgc ggtacagtag taaccggccg tgtagagcgc
      541 ggtatcatcc acgttggtga cgagattgaa atcgtcggtc tgaaagaaac ccaaaaaacc
      601 acttgtaccg gtgttgaaat gttccgcaaa ctgctggacg aaggtcaggc gggcgacaac
      661 gtaggcgtat tgctgcgcgg taccaaacgt gaagacgtgg aacgcggtca ggtattggct
      721 aaaccgggta ctatcactcc tcacaccaaa ttcaaagcag aagtatacgt actgagcaaa
      781 gaagagggtg gtcgtcacac tccgttcttc gccaactacc gtccgcaatt ctacttccgt
      841 accaccgacg taaccggcgc ggttactttg gaagaaggtg tggaaatggt aatgccgggt
      901 gaaaacgtaa ccatcaccgt agaactgatt gcgcctatcg ctatggaaga aggcctgcgc
      961 tttgcgattc gcgaaggcgg ccgtaccgtg ggtgccggcg tg
//
LOCUS       DAXHRP010000271          983 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.271, whole genome shotgun sequence.
ACCESSION   DAXHRP010000271 DAXHRP010000000
VERSION     DAXHRP010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.271"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..404
                     /locus_tag="ACFM72_002122"
     CDS             <1..404
                     /locus_tag="ACFM72_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Imm49 family immunity protein"
                     /protein_id="HFC6258619.1"
                     /translation="KWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMAAKET
                     LSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLIVYDPLPADEYQDIFDFMKQY
                     DLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
BASE COUNT          278 a          242 c          208 g          255 t
ORIGIN      
        1 gcaaatggct gcaaaagcgg ttgtacgatt accgcttctt cctcgctttc gccgaacagg
       61 atgccgaggc gatgaaggcc gccttagagc cgcttttcga taaaaaaacc gcgcgtatgg
      121 ctgccaaaga aacattgtcc tatttcgatt tctacctgca gccgcaaatc gttacctatg
      181 ccaaaatcgc atccatgcac ggtttcgatt tgggcataga ccacgaaatc gcaccgaggg
      241 atttgattgt ttacgatccg ctgccagcag acgaatatca agacatcttc gattttatga
      301 aacagtatga cttgtcttac ccgtatgaat atctgcagga ttggatagat tactatacgt
      361 tcaaaaccga taagctggta tttggtaacg cgaagcgaga gtgagccgta aaactctgag
      421 ctcctgtttt atagattaca actttaggcc gtcttaaagc tgaaagattt tcgaaagcta
      481 taaattgaag cccttccata gtacatagat ctgtgttgtg gcggggcttt accacgctga
      541 ttgccggaga agaactcaac ctgctggcaa aacaaggcat gagatctttg caataacatg
      601 agttgagacc tttgcaaaaa agcccttccc cgacagccga aacccaaaca caggatttcg
      661 gctgttttcg ccccaaatac ctcctaattt tacccaaata cccccttaat cctcctcgga
      721 cacccgataa tcaggcatcc aggctgcctt ttaggcggca gcgggcgcat ttagcctgtt
      781 ggccgctttc aacaggttca aacacatcgc cttcagatgg ctttgcgcac tcactttgtc
      841 atttccaatg ttccaagtac acctaatctg ctaagaggaa gacagcttga aggaaaactt
      901 attttagaag ttcctgctca ggtcaatcca attccacaat ctgtattaag ggcggcacaa
      961 gaagaaaatg ttatcattag aga
//
LOCUS       DAXHRP010000272          978 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.272, whole genome shotgun sequence.
ACCESSION   DAXHRP010000272 DAXHRP010000000
VERSION     DAXHRP010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.272"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>978
                     /locus_tag="ACFM72_002123"
     CDS             <1..>978
                     /locus_tag="ACFM72_002123"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HFC6258620.1"
                     /translation="VCVLEKQHFPRFVIGESLLPHCMEMLEEAGFADAVRAEPGFQLK
                     NGAAFSWGSRYTEFDFTDKFSDGPGTTYQVRRAVFDKILIEEAAKQGVEVRFGHGVTA
                     FDNSGDFVRLNIETDTGKRYELTAKFVLDASGYGRVLPRLLNLETPSHLPPRQAHFTH
                     IDDNITNPKFDRNKILITTYPQHRDVWIWLIPFGDNRCSAGVVGTPDKLVGESETVLK
                     KFVYECPMLNEILDKAVWETDFPFHSIQGYSANVKSLHGRHFALLGNAAEFLDPVFSS
                     GVTIALHSARLAADLLAKQLKGEAADWQTEFAEPLMIGVDAFRTYSGLN"
BASE COUNT          230 a          290 c          252 g          206 t
ORIGIN      
        1 aagtctgcgt gttggaaaaa cagcactttc cgcgcttcgt catcggcgaa agcctgctgc
       61 cgcactgtat ggaaatgctg gaagaagccg gatttgccga tgccgtgcgc gccgagcccg
      121 gctttcagtt gaaaaacggc gcggcgtttt cgtggggcag tcgttatacc gaattcgatt
      181 tcaccgataa attttcagac ggccccggca cgacttatca agtacgccgc gccgtgttcg
      241 ataaaatcct gattgaagaa gccgccaaac aaggcgttga agtacgtttc gggcacggcg
      301 taaccgcgtt cgacaacagc ggcgattttg tccgcctgaa catcgaaacc gacaccggca
      361 agcgctatga actgaccgcg aaattcgtct tggacgcaag cggttacgga cgcgtgctgc
      421 cgcgcctgct aaacttggaa acgccctcgc acctgccgcc gcgccaagcg catttcacgc
      481 acatcgacga caacatcacc aacccgaaat tcgaccgcaa caaaatcctg attaccacct
      541 atccgcaaca ccgcgacgtg tggatttggc tgattccctt cggcgacaac cgctgttccg
      601 ccggcgtggt cggcacgccc gacaaacttg tcggcgaatc ggaaacagtg ttgaaaaaat
      661 ttgtttacga atgcccgatg ctgaacgaaa ttttggacaa agccgtttgg gaaaccgatt
      721 ttccgttcca ctccatccaa ggctattccg ccaatgtgaa atcgctgcac ggcaggcatt
      781 tcgcgctatt gggcaatgcc gccgagttcc tcgatcccgt gttctcgtcg ggcgtaacca
      841 tcgcgctgca ctccgccaga cttgccgccg atctgttggc aaaacaactc aaaggcgaag
      901 ccgccgattg gcaaaccgaa tttgccgaac ccttgatgat cggcgtggac gcgttccgca
      961 cctatagtgg attaaatt
//
LOCUS       DAXHRP010000273          971 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.273, whole genome shotgun sequence.
ACCESSION   DAXHRP010000273 DAXHRP010000000
VERSION     DAXHRP010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.273"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..80
                     /locus_tag="ACFM72_002124"
     CDS             <1..80
                     /locus_tag="ACFM72_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HFC6258621.1"
                     /translation="EKAWNLYEKNKTVQQTQPFQLHRCG"
     gene            158..487
                     /locus_tag="ACFM72_002125"
     CDS             158..487
                     /locus_tag="ACFM72_002125"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC6258622.1"
                     /translation="MGSLIIEDLQEGFGKEAVKGKEITVHYTGWLENGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGARGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            516..722
                     /locus_tag="ACFM72_002126"
                     /pseudo
     CDS             516..722
                     /locus_tag="ACFM72_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249814.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          275 a          267 c          248 g          181 t
ORIGIN      
        1 atgaaaaagc atggaacctt tacgaaaaaa ataaaacagt ccaacaaaca cagccgtttc
       61 aactgcaccg gtgcggctga cgtttgagcg gcatttgact tcgccggacg gtatgttacc
      121 cttgccgttt tgaccaacaa gcaacgaaag gacaaatatg ggcagcctga ttattgaaga
      181 tttgcaggaa ggcttcggaa aagaagcagt taaaggcaaa gagattaccg tgcattacac
      241 aggttggctg gaaaacggaa ccaaattcga ctccagcctc gaccgccgcc agccgctgac
      301 catcacgctc ggcgtcggac aagtcatcaa aggctgggac gaaggcttcg gcggcatgaa
      361 ggaaggcggc aaacgcaagc tgaccatccc ttcggaaatg ggctacggcg cacgcggcgc
      421 gggcggcgtg attcctccgc acgccacttt gatatttgaa gtcgagctgc tgaaagtgta
      481 cgaataaagc tgcccgggca ataccgtctg acataatggc ttcaagcaac gtaaacaacg
      541 aaatcaaaga caaaaaactc tccctgtggg ccaagcgtca agacggttcg gtaaaatggt
      601 tctgcggaca gccggttacg cgcaacgaca ccgccaaaga cgacaccgtc gccgccgaca
      661 ccgacaccgc caagaagatc gacaccaagc acctgccgtc aacctgccgc gatgattcat
      721 ctaccggttg catagaaaca ccacgcgccg acttcaaaca cttccaaaaa atcagccgtt
      781 accgagtatt gcccgaatca cggcacatgg ccgaaaaact tcgtcattcc cgcgcaggcg
      841 ggaatctagg tctgtcggca cggaaactta tcgggtaaaa cggtttcttg agattttgcg
      901 ttctagattc ccactttcgt gggaatgacg ggatttaatg atgccgccgg cgtggcatcc
      961 gtctccaccg a
//
LOCUS       DAXHRP010000274          960 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.274, whole genome shotgun sequence.
ACCESSION   DAXHRP010000274 DAXHRP010000000
VERSION     DAXHRP010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.274"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..242
                     /locus_tag="ACFM72_002127"
     CDS             <1..242
                     /locus_tag="ACFM72_002127"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258623.1"
                     /translation="GETTTYRFLLIRYTTMNPSQYLFIDLNFDKIPDTRLCCFSIFQP
                     TVNLKQPVHAMLQFLFLSADCFDKELKIHFMHLKI"
     gene            350..910
                     /locus_tag="ACFM72_002128"
     CDS             350..910
                     /locus_tag="ACFM72_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HFC6258624.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINLPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
BASE COUNT          271 a          268 c          193 g          228 t
ORIGIN      
        1 aaggcgagac aacgacgtac cggtttttgt taatccgcta taccacgatg aatccttcgc
       61 aatatctgtt tatcgacctc aattttgaca aaataccgga tacgcgcctt tgttgctttt
      121 ccatcttcca accaactgta aatctcaaac agccggtaca cgccatgctt cagtttcttt
      181 tcctgtcggc ggattgtttc gacaaagaat tgaaaatcca tttcatgcac cttaaaattt
      241 aatctgcatt caaacctttt cactttggaa gcaccattta tcggatgtcc cttcgcaata
      301 aacaaatttt cccgataccg ccgcccattt caacccaaac ccaaaagcta tgaaaaacct
      361 catcgccttc aacaaaccct atggcgttat ctgccaattt tcaccgcacg aaaaacacaa
      421 aagcctcaaa gactttatca atcttcccgg cttctacccc gccggacggc tcgacaccga
      481 cagcgagggg ctgctgctgc tgaccgacga cggcaggctt caggcacaaa ttaccgaccc
      541 caaattcaaa caccccaaaa cctactgggc acaactggag ggcgtacccg acgaaagccg
      601 attggaaagc ctaagaaaag ggatagactt aggcggtttc gttacccgtc cggcaagcat
      661 ccgcatcttg aaacacggag aagcagattc gttatgggag cgcatcccgc cgatacgcgt
      721 ccgcaaaacc gttcccgatt tttggattga aattaccatt tctgagggca aaaaccgcca
      781 agtcaggcga atgaccgcca aggcgggcta tccctgcctg cgtctgatca gagtggcaag
      841 cggcaggctg aaactgtttg atttggattt aaaacccggg gaatgggcat acgccccgtt
      901 taaaccataa tcacgtttat ctcatcattt ccacaaaagt gggaatccgg aattttatag
//
LOCUS       DAXHRP010000275          931 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.275, whole genome shotgun sequence.
ACCESSION   DAXHRP010000275 DAXHRP010000000
VERSION     DAXHRP010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.275"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            57..782
                     /locus_tag="ACFM72_002129"
     CDS             57..782
                     /locus_tag="ACFM72_002129"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HFC6258625.1"
                     /translation="MPRFHLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRQPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          250 a          317 c          209 g          155 t
ORIGIN      
        1 gtccgtttcc atcacgccgc tgcgacagat tataaccgtc cgaaccgcca aaaactatgc
       61 cccgattcca cctgcccgaa aacctttccg tcggacaaac cgtcgccctg cccgacaaca
      121 tcgtccgcca cctcaacgtc ctgcgcgtcc gccccaacga aaacatcacc ctcttcgacg
      181 gcaaaggcaa ggcacacgcc gcacggctga ccgttttgga aaaacgccgc gccgaagccg
      241 aaatcctgca cgaagacaca accgacaacg agtccccgct caacatcaca ctgatacaat
      301 ccatctcctc cggcgatcgc atggatttca ccctgcaaaa aagcgtcgaa ctcggcgtaa
      361 ccgccataca gcccgtcatc agcgaacgct gcatcgtccg cctcgatggg gaacgcgccg
      421 ccaaacgcct cgcacgctgg caggaaatcg tcatctccgc gtgcgaacaa agcggcagga
      481 acaccgttcc ccccgtactg cccatcatcg gctaccgtga agcactcgac aaaatgccgt
      541 ctgaaagcac caagctgatt atgagcatca accgcgcccg caaactcggc gacatacgcc
      601 aaccgtccgg cgcaatcgtc tttatggtcg ggcccgaagg cggctggaca gaacaggaag
      661 aacaacaggc atttgaagct ggctttcaag cggttacact cggcaaacgg attttacgca
      721 cagaaaccgc cccactcgcc gccctcgccg ccatgcagac gctttggggc gatttcgcat
      781 aaacagaaat gccgtctgaa acccgttcag acggcatttt gcagccgatt aagatagtag
      841 gttcaaataa gatttcccgt gtcgtcattc ccgcgaaagc gggaatctag aaacgaaaaa
      901 ctacagagat ttatccgaaa caacaaccct c
//
LOCUS       DAXHRP010000276          911 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.276, whole genome shotgun sequence.
ACCESSION   DAXHRP010000276 DAXHRP010000000
VERSION     DAXHRP010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.276"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            586..>911
                     /locus_tag="ACFM72_002130"
     CDS             586..>911
                     /locus_tag="ACFM72_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009289 - pilus [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC6258626.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAI
                     LLAEGQKSAVTEYYLNHGEWPGDNSSAGVASSSTIKGKYVQSVTVANGVITAQMASSG
                     VNNEIKG"
BASE COUNT          308 a          249 c          154 g          200 t
ORIGIN      
        1 acgcaaaatc tcaagaaacc gttttcccga taagtttccg taccgacaga cctagattcc
       61 cgcctgcgcg ggaatgacga agccatccgc acggaaacct gccgcgatga ttcaactgcc
      121 gtttgcacag gaacaccacg cgccgatttc aatcactttc caagaaaacg gaaattttta
      181 aaaattaaat ttaaaatttc ccacccaacc caccctatgc taccgcgcaa attcaaaaat
      241 ctcaaattcc gacccaatca acacacccga tgccccatgc caatagaaat accccacgcc
      301 aataaaaaag tgccgaaaat cggcactaaa actgacaatt ttcaacactg atgacaaaaa
      361 acggtaaccc cctgcttcct caaaccacgc ccaaacgaaa gaaaatgtaa aataaaaaca
      421 accatataaa gataaacgca taaattttca cctcaaaaca caaacttgat accaatcttg
      481 ctttataata cacaggtatc gcaacaaaat accgatggtc aaatacattg cataatgccg
      541 atggcgtaag cttgaagcat ttcctttcca attaggagta attttatgaa cacccttcaa
      601 aaaggtttta cccttatcga gctgatgatt gtgattgcca tcgtcggcat tttggcggca
      661 gtcgcccttc ctgcttatca agactacaca gcccgcgcac aagtttccga agccattctt
      721 ttggctgaag gtcaaaaatc agccgtcaca gagtattacc tgaatcacgg cgaatggccc
      781 ggcgacaaca gttctgccgg cgtggcatct tcttcaacaa tcaaaggcaa atatgttcaa
      841 agcgttacag tcgcaaacgg cgtcattacc gcccaaatgg cttcaagcgg cgtaaacaac
      901 gaaatcaaag g
//
LOCUS       DAXHRP010000277          909 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.277, whole genome shotgun sequence.
ACCESSION   DAXHRP010000277 DAXHRP010000000
VERSION     DAXHRP010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.277"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(87..719)
                     /gene="mtrR"
                     /locus_tag="ACFM72_002131"
     CDS             complement(87..719)
                     /gene="mtrR"
                     /locus_tag="ACFM72_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HFC6258627.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAKDAEGESWTVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          201 a          199 c          241 g          268 t
ORIGIN      
        1 tgtattttta gaagaaggct ttgtgtcatt ttgatgccgt ctgaaagggt ttgttcgttt
       61 cagacggcat tgctaccaag gcttgattat ttccggcgca ggtcgggatg gttttccaag
      121 ttgtccatca ttatcccgat gatgcgcggg gcggttttgc ccaaatcgaa acgttcgcag
      181 gaagagaacc accgccaaat cagcccgtcc aaggttgatt tgatgaagat aactgccgtt
      241 tccttgtcca aatcgtcagc caaatcctga ttttccaccg cttcggtcaa aacggcggta
      301 attttctcgc gccagattgc ctgatgcttg cgggcaatgg cgataacggc ggcgttttgc
      361 tccgtgtgtt cgcattttaa aaacaggatg ttgtggaatt tgtagtagat gtcgttgctt
      421 tgcagccgct cgaaaaagtg cagcagcgtg tggcggaata ccgtccaaga ttctccttcg
      481 gcatctttgg catcttgcgc gatgcagttt tcgatgtcgt cgcagatacg ttggaacagc
      541 gcgtcgaaca agtcttcctt atttttgaaa tgccaataga gcgcgccgcg cgttacgccg
      601 gcggcttggg cgatttcgtt gagcgaggtg cgcgcaatcc ctttgcggta aaaggtttcc
      661 aaggcggcaa gcatcaggtg ttctttggtt tttaaggctt cggttttggt ttttctcata
      721 atggcggttt cgtttcgggt cggtttgatg agggcggatt ataaaaaaga ctttgtaacc
      781 atgcaatcgt gtatgtataa tgaaacccat gaaattgaga ctacatctca actttgaaaa
      841 cccatgaaac ctgcttcgca acccgtttga acatcgggtt ggcgaagcag gcggttttta
      901 tatcctgaa
//
LOCUS       DAXHRP010000278          907 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.278, whole genome shotgun sequence.
ACCESSION   DAXHRP010000278 DAXHRP010000000
VERSION     DAXHRP010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.278"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..198
                     /locus_tag="ACFM72_002132"
     CDS             <1..198
                     /locus_tag="ACFM72_002132"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258628.1"
                     /translation="ADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKNTCDPAGFGLAG
                     QQTAWGGGAGGFETALQRLKE"
     gene            548..>907
                     /locus_tag="ACFM72_002133"
     CDS             548..>907
                     /locus_tag="ACFM72_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HFC6258629.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          283 a          148 c          212 g          264 t
ORIGIN      
        1 gctgatgccg gagacgtata ttgcgtctat aacatcagac tgaagcagta cactgcctgc
       61 caggttaccc gagttgaaga acacggtggc aaaaaaaaca catgcgaccc tgctggcttt
      121 ggactggcag ggcaacaaac cgcttggggc ggaggagctg gcggatttga aaccgcttta
      181 caaagactta aagaataata ttggaaatat tgtatgaaca aaaaattaaa ctatattttt
      241 atgttggact gtttagggtt ggtgatattg tttacttgta taatagctac ttttgaaaga
      301 gattatggat ttaaaatttt tactaattct aagagacctg aattttatta ttggattgga
      361 atgttttatt atggaattat ttcttgctgg tttgattatc aattaatttc aacaaaggcg
      421 aattcgtata aaagaaaagt taaacaatat aaaatttttt cagtaatatt ttcagttttg
      481 atatttattt ctactatagt aaaactttaa attttggagc aaaaatttat gagcgattca
      541 attgaatatg tattgggaac gcggtctgca catgtataag gcaagtgccg tcgtgccgac
      601 gggatatgta cgggttggga ataccgcgcc gctggtcggc gaagacacgc aacggtatgc
      661 ctctttttgg ggcgacggct acgacgtgta ccgtcagttg agatggcagc agatacccga
      721 aaaacagaga aaggcattca aaaaagccgc caaaagcaaa aagaccgtga tgtttgccgg
      781 acgggaatac ggcatatcca aacagaattt gagcgatgtt tgggatgatt ttgaagacgc
      841 gatggaactg aaggcgtttc cctgcctgtc ttcgctgttt ctgaccaaat ggcataaaaa
      901 tctatat
//
LOCUS       DAXHRP010000279          895 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.279, whole genome shotgun sequence.
ACCESSION   DAXHRP010000279 DAXHRP010000000
VERSION     DAXHRP010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.279"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            119..412
                     /locus_tag="ACFM72_002134"
                     /pseudo
     CDS             119..412
                     /locus_tag="ACFM72_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216136.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            694..895
                     /locus_tag="ACFM72_002135"
                     /pseudo
     CDS             694..895
                     /locus_tag="ACFM72_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          267 a          241 c          200 g          187 t
ORIGIN      
        1 tcattcccac gcaggcggga atctaggtct gtcggcacgg aaacttatcg ggtaaaaagg
       61 tttctccggt cctgagttct agattcccgc ttttgcggga atgacgggat ttaatgatgc
      121 cgccggcgtg gcatcctcct ccgacatcaa aggcaaatat gttgagaaag ttgaagtcaa
      181 aaacggcgtc gttaccgcca caatgctttc aagcggcgta aacaaagaaa tcaaaggcaa
      241 aaaactctcc ctgtgggcca agcgtcaaaa cggttcggtc aaatggttct gcggacagcc
      301 ggttacgcgc aacgacaccg ccaccgccac cgacgtcgcc gccgccaacg gcaagaccga
      361 cgacaaaatc aacaccaagc acctgccgtc aacctgccgc gatgattcat ctaccggttg
      421 catagaaaca ccacgcgccg atttcaaaca ctttcaaaaa atcagccgtt accgagtatt
      481 gcccgaatca cggcaaatgg cagaaaaact tcgtcattcc cgcaaaagtg ggaatctagt
      541 tcgttgagtt tcagttattt agaataaatt ttgaaacttt aatcccgtca ttcccgcgaa
      601 agtgggaatc cagaacgcaa aatctaaaga aaccgtttta cccgataagt ttccgtaccg
      661 acagacctgg attcccgcct gcgcgggaat gacgaagcta tccttttggc cgaaggtcaa
      721 aaatcagccg ttaccgagta ttacctgaat cacggcacat ggccgaaaaa caacacttct
      781 gccggcgtgg catcttcttc aacaatcaaa ggcaaatatg ttaaggaagt tacagtcgca
      841 aacggcgtca ttaccgccac aatgctttca agcggcgtaa acaaagaaat ccaag
//
LOCUS       DAXHRP010000280          876 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.280, whole genome shotgun sequence.
ACCESSION   DAXHRP010000280 DAXHRP010000000
VERSION     DAXHRP010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.280"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..409
                     /locus_tag="ACFM72_002136"
     CDS             <1..409
                     /locus_tag="ACFM72_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258630.1"
                     /translation="EGYIEKLHITPANTHECNHLSPLLEGIAEDTTVYADKGYDSKEN
                     RQHLKEHRLLDGIMRKAQRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAA
                     YFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA"
     gene            662..>876
                     /locus_tag="ACFM72_002137"
     CDS             662..>876
                     /locus_tag="ACFM72_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC6258631.1"
                     /translation="MHYKLIELFVAGVTARKAAELVGVNKNTAAYYFHRLRLLIYQNS
                     PHLEMFDGEVEADESYFGGQRKGKRGRG"
BASE COUNT          246 a          197 c          230 g          203 t
ORIGIN      
        1 ggaaggctat atcgagaaac tgcacattac ccccgccaat acccatgagt gcaaccacct
       61 gtcgcctttg ttggagggca ttgccgaaga tacgaccgtc tatgccgaca aaggctacga
      121 cagtaaggaa aaccggcaac acctgaaaga acatcggttg ctggacggca ttatgcgcaa
      181 agcccagcgt aaccgtccgc tgacggaagc gcaaaccaaa cgtaaccgat atttgtcgaa
      241 aacccgttat gtggtcgaac aaagctttgg tacgctgcac cgtaaattcc gctacgcccg
      301 ggcagcctat ttcgggctga ttaaagtgag tgcgcaaagc cacctaaagg cgatgtgttt
      361 aaacctgttg aaagcagcta acaggctaag tgtgcctgtt gccgcctaaa aggcggcccg
      421 gatgcctgat tatggggcgt ccggggaaga ttaagggggt atttgggtaa aatcaggagg
      481 tatttggggc gaaaacagcc gaaaacctgt gtttgggttt cggctgtcgg gagggaaagg
      541 aattttgcaa aggtctcaaa tagcacggaa ccgattcact tggtgctcaa gcaccaagtg
      601 aatcggttcc gtgctatttg tactgcctgc ggcttcgtcg ccttgtcctg atttaaattt
      661 aatccactat aaactcattg aactgtttgt cgcaggcgta actgcaagaa aggcagcaga
      721 gttagtaggc gttaataaaa ataccgcagc ctattatttt catcgtttac gattacttat
      781 ttatcaaaac agcccacatt tagaaatgtt tgatggcgaa gtagaagcag atgaaagtta
      841 ttttggcgga caacgcaaag gcaaacgcgg tcgcgg
//
LOCUS       DAXHRP010000281          834 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.281, whole genome shotgun sequence.
ACCESSION   DAXHRP010000281 DAXHRP010000000
VERSION     DAXHRP010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.281"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>834
                     /locus_tag="ACFM72_002138"
     CDS             <1..>834
                     /locus_tag="ACFM72_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HFC6258632.1"
                     /translation="DGAIGAAVGEIVGEALVKNTDFSRMSATEIEKSKAKITAYSKLV
                     AGTATAVAGGDVNAAANAAQIAVENNTLYPKCIGAKCDEFQKEQQKWIRENPEEYREV
                     LLLQTGFIPIIGDIQNFVQAQTAADYLFALVGVVPGIGESIQAYKVAKAAKNLQGMKK
                     ALDKAATVATAQGYVSKTKIKIGQTELRVTAATDKQLLKTISEGRDTTGKMTEQLFDS
                     LAKQNGFRVLSGGKYGGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQ
                     MS"
BASE COUNT          259 a          146 c          227 g          202 t
ORIGIN      
        1 gatggcgcga taggcgctgc agtcggtgag attgttggtg aggctttggt taagaatact
       61 gatttcagtc gtatgagtgc gaccgaaatc gaaaaatcta aagcgaagat tactgcctat
      121 tcaaaactgg ttgccggcac tgcgactgcc gttgcaggcg gggatgtgaa tgctgcggca
      181 aatgcagcac agatagcggt ggagaataat actttgtatc ctaaatgcat tggtgcaaag
      241 tgtgatgaat ttcaaaagga acaacaaaaa tggatacgtg aaaatcctga agaatatcgg
      301 gaagttttgc ttcttcagac gggatttatt ccaattatcg gtgatataca gaattttgta
      361 caagcacaga ccgctgctga ttacctgttt gctttggtgg gtgtggttcc gggtatcggt
      421 gaatcgatac aggcctataa agtagcgaaa gcggcaaaaa atttacaagg catgaaaaaa
      481 gccttggaca aggcagcaac cgttgccact gcacagggct atgtcagcaa aaccaaaatc
      541 aaaatcggtc aaactgaatt aagggttact gcagcaactg acaaacaatt gctgaaaacc
      601 attagcgaag gaagggacac gacaggtaaa atgaccgagc agttatttga ctctttagct
      661 aaacaaaatg gcttcagagt gctttcgggc ggcaaatacg gcggaaataa cggttttgat
      721 catgtatggc aggctgccga tggtagtgtc gttttgattg tagaaagtaa gcagattagg
      781 aacggtacgg tacagctgaa tccgaatggt gcgggtggat atacgcaaat gagt
//
LOCUS       DAXHRP010000282          826 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.282, whole genome shotgun sequence.
ACCESSION   DAXHRP010000282 DAXHRP010000000
VERSION     DAXHRP010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.282"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..426
                     /locus_tag="ACFM72_002139"
     CDS             <1..426
                     /locus_tag="ACFM72_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HFC6258633.1"
                     /translation="QFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHWNNRVNQAEEDNYSTSVGSCINGFT
                     VRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK"
     gene            complement(445..826)
                     /locus_tag="ACFM72_002140"
                     /pseudo
     CDS             complement(445..826)
                     /locus_tag="ACFM72_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          276 a          145 c          165 g          240 t
ORIGIN      
        1 caatttctac gcgacggttt ggatagcgtg gacgatattg ttatccgaaa agatgcgtgt
       61 agtttaagca cgactatggg agaaagattg cttacttacg gggttaaaaa aatgccatct
      121 gcctatcctg aatacgaggc ttatgaagat aaaagacata ttcctgaaaa tccatatttt
      181 catgaatttt actatattaa aaaaggagaa aatccagcga ttattactca ttggaataat
      241 cgagtaaacc aggctgaaga agataattat agcactagcg taggttcctg tattaacggt
      301 ttcacggtac ggtattaccc gtttattcgg gaaaagcagc agctcacaca gcaggagttg
      361 gtaggttatc accaacaagt agagcaattg gtacagagtt ttgtaaacaa tccaagtaaa
      421 aaataatggg gctgtcctgg acaactaaga taaactcgat tttactaatt gttttaaaat
      481 ggaacaagaa cttttatctc actgttgtta aaacgccatt cgcactcctt taaatacagc
      541 tcaaaatgcg ctttgggaat gccgttaaac ttgcgtaaat gacgttttgc ctggttccaa
      601 aagttctcaa ttccattaat atggttttgt cgttcagcaa aatgtgtgct gtgattgata
      661 cgaaaacgaa gtttcagcga agctaaaatg gctaaattcg ctcacatcta atacatcata
      721 gctacgataa caatccgtat aaacaatact gtcaggtttc acttgttcac ggataatagg
      781 aaataaagta gcggtttgag tattcggtac tgtaaccgta taaacc
//
LOCUS       DAXHRP010000283          733 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.283, whole genome shotgun sequence.
ACCESSION   DAXHRP010000283 DAXHRP010000000
VERSION     DAXHRP010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.283"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..336
                     /locus_tag="ACFM72_002141"
     CDS             <1..336
                     /locus_tag="ACFM72_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme4 family transposase"
                     /protein_id="HFC6258634.1"
                     /translation="VDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
                     NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSQQL
                     KILRDWCGI"
BASE COUNT          177 a          160 c          192 g          204 t
ORIGIN      
        1 gtggataatg ccaagtctga aacgttactc cctgtcatca agaagaaaat catgccggac
       61 agtattgttt ataccgatag tctgagcagc tgcgacaagt tggacgtgag cggttttatc
      121 cattaccgca tcaaccattc caaggaattt gcagaccgtc agaaccacat taacggcatt
      181 gagaactttt ggaatcaggc aaaacgcgtc ttgcgaaaat acaacggaat cgatcgtaaa
      241 tctttcccgc tgttcttgaa agaatgcgaa tttcgattta acttcggcac accgtctcaa
      301 cagcttaaaa tcctgcggga ttggtgtggg atttagggct aatctagtac agccccttag
      361 atttaattca ctatacctgc gtaatggtat cgggtactca tcatcaacct gccttacatt
      421 cggttgtgtt gtccggcaac tgtccggttg tgtcgatggg ttgccctgcc gctccctgtg
      481 ctgcgcaacg gttgtgtgcc ttgggtgggc gcgggtggcg gccgggcggt ttgttgctat
      541 gatacgggag ttccgatata caagggtggg cttcagccca ccaatcaacg accgaaaaag
      601 aaaaaacgtt gggctgaagc ccactctacg caattacgca actgttatcg tggggatgac
      661 gggattttag gtttttgttt ttctgttttt gcgggaagga tgggttttag gttgcggtca
      721 tttatcggaa aag
//
LOCUS       DAXHRP010000284          724 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.284, whole genome shotgun sequence.
ACCESSION   DAXHRP010000284 DAXHRP010000000
VERSION     DAXHRP010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.284"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(127..>724)
                     /locus_tag="ACFM72_002142"
     CDS             complement(127..>724)
                     /locus_tag="ACFM72_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HFC6258635.1"
                     /translation="LSIGQIVKVKPAGYAAPKTSAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          162 a          207 c          198 g          157 t
ORIGIN      
        1 aaacacagtc aaacaaattt atatgcccca tcccttccga ataatttgaa aacacagccg
       61 ccaaaaacaa aaatgccgtc tgaaaacctt tcagacggca tttccaactt gatttcaggc
      121 agaaagtcag aacgcgatat agctgttcgg gttaaccggt ttgccgtttt gccgcacctc
      181 gaaatgaagc tgcgttctgg aagcgtcggt attgcccatc aaagcgacct gctgcccgcg
      241 tttgacctgc tggccttcgc cgaccagcaa tttttggttg tgcccgtatg cggtcaggaa
      301 ggaagaatta tgctggatga tgaccagatt gccgtatccc ctcaaaccgg aacctgcata
      361 aaccactttg ccgtcagccg ccgccaaaac gggctgtccc gcattaccgg caatatcgac
      421 acccttgttg ttgccgccga aatcggcaac cactttacct tgcgtcggac gctgccaaac
      481 aatgccgccg accgaacgcg tgccggaagg cgaagcggca ggagattgcg gggcgggcgc
      541 gggaaccgct ttattttccg cagcgggcgc ggcaggttgc ggcgcggact gcacaggcgg
      601 ttgcgcggcg ggtttcacag gggtttgcac ggcagccggt acggcgggcc tgctttctac
      661 ggctgaggtt ttcggtgcgg catatcctgc cggtttgact ttaacaatct gaccgatgct
      721 caac
//
LOCUS       DAXHRP010000285          706 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.285, whole genome shotgun sequence.
ACCESSION   DAXHRP010000285 DAXHRP010000000
VERSION     DAXHRP010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.285"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(90..641)
                     /locus_tag="ACFM72_002143"
     CDS             complement(90..641)
                     /locus_tag="ACFM72_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258636.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
BASE COUNT          198 a          277 c          134 g           97 t
ORIGIN      
        1 caaagaaacc gccattagca ctacaccccc caagctgcgg ctgccaaaca catcggctgc
       61 ttctcgacgc acccgctgaa aaatgcgtcc tatccgtccg ccttgcccgc accccctgac
      121 tttgccgccc tgcccgatgc cgtctgaagc ctgaaccgcc ccaccagccc gatgacgcac
      181 gacaccgccg gaaagggcat acacaaagcc gtcagcacat aacgcgcatt ccccgtattg
      241 accacgtccg cgcccttcag cagcagcggc agcgcgttcg cccactccca caccgacggc
      301 gcgctgaacg ccaataccgc caccagcccc aacatccgga acaccccgat ttccaacacc
      361 tgccgccgcc gcaccgaacg gttgagcaaa aacacaaccg ccaacccgaa acagaccacc
      421 gccgccatac cgccgttggc gacaatctgc aaactgttga atgcaatatc gggcgtaacc
      481 gccaacacgc cttccgaatc cggcacggca cgctgcaaat ccaaaccctg caacacattc
      541 aacacaaaac cgtagatcaa atcaaaaaac accacgccta tcggcaaagc actcaaaacc
      601 cgccacatct tcctgtccga ccaaccgttc aaaactttca ttttacccga ccacgcaagc
      661 cgccgaacaa aaaacaaggg gctgtcctag ataactagga caaact
//
LOCUS       DAXHRP010000286          704 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.286, whole genome shotgun sequence.
ACCESSION   DAXHRP010000286 DAXHRP010000000
VERSION     DAXHRP010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.286"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            55..213
                     /locus_tag="ACFM72_002144"
     CDS             55..213
                     /locus_tag="ACFM72_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HFC6258637.1"
                     /translation="MCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGVGKED
                     FYLLDFVI"
BASE COUNT          192 a          182 c          168 g          162 t
ORIGIN      
        1 ggtttttgtt aacccactat acaaaaaaca aggaaacaca aatggcgcaa taatatgtgc
       61 ggcccctgcg gctggattta cgatgaagaa cacggcgacc ccgaacacgg catcgccccc
      121 gggacaaagt ttgaagacat ccccgacgac tggaaatgcc ccgaatgcgg cgtgggcaaa
      181 gaagatttct acctgttgga tttcgtgata tagcggcagc cgcaccctta gggaaaaccc
      241 cgtcatccgg cgttccgcct gcggcggcag ggaacaccgt tttatagtgg attaacaaaa
      301 atcatgacaa ggcgacgaag ccgcagacag tacaaatagt acggaaccaa ttcacttgtt
      361 aaagaatcgt tctctttgag ctaaggcgag gcaacgccgt actggttttt gttaatccac
      421 tatatccgtt tgcgcccgcc aagccgtgtt gcacagatgc gacacggctt tttccttttc
      481 gtcgtccgaa tgtaaatttt cggcaaaaaa cgtcaaaaat cacccccccc ccgcatttgc
      541 gtaaaataaa gtgtaatccc tttgatcata agggaatgtt gacaattaga tcgattctcc
      601 taggctgact ttcgcaataa atggggttgt caataattgt gtatggtcgt ttgccgtccg
      661 gcggccgtca ttcccgcgca ggcgggaatc cagcaacaca acgc
//
LOCUS       DAXHRP010000287          700 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.287, whole genome shotgun sequence.
ACCESSION   DAXHRP010000287 DAXHRP010000000
VERSION     DAXHRP010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.287"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..78
                     /locus_tag="ACFM72_002145"
     CDS             <1..78
                     /locus_tag="ACFM72_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC6258638.1"
                     /translation="FKTTKWGICRAIADAIAMELGAAKV"
     gene            75..278
                     /locus_tag="ACFM72_002146"
     CDS             75..278
                     /locus_tag="ACFM72_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258639.1"
                     /translation="MKKSLIALCVAHCAKLKNDFGVPPLPEIKITPSPVRVGSLKQHP
                     SLRLGKSGVAAAKRAARKRKNRR"
     gene            281..445
                     /locus_tag="ACFM72_002147"
     CDS             281..445
                     /locus_tag="ACFM72_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258640.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYREML
                     KRHLQTKSVE"
     gene            448..684
                     /locus_tag="ACFM72_002148"
     CDS             448..684
                     /locus_tag="ACFM72_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258641.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSFVSVKRQEVENESRETAGE"
BASE COUNT          171 a          146 c          217 g          166 t
ORIGIN      
        1 tttaagacga ccaaatgggg catctgccgc gcgattgcgg acgcgattgc gatggaattg
       61 ggagcggcga aggtatgaaa aagtctttga ttgctttatg tgttgcccat tgtgcaaagt
      121 tgaaaaacga ttttggcgta ccaccgttac ctgaaatcaa aatcacgcca agccctgttc
      181 gggtaggctc tttgaaacaa catccgagcc tgcgcttggg taaatcaggc gtggcggctg
      241 ctaaacgtgc ggcgcgcaaa cgcaagaatc gtcgttaatc atgggacagg ttgcgtttta
      301 cgaaaagatg attgggctgt ggtcggccaa aagccgtgag gcaagcgaac aggcggactt
      361 ggctgcgttt gaatttgcgg agggcgaact ggccaattat cgggaaatgc tgaaacggca
      421 cctgcaaacc aaaagtgtgg aatagcaatg cgtattttgg atatttttaa aaacccggcg
      481 acaggcaatg tgtcgcactc gaaactgtgg gcaaacgttg cctgcgcggc tgggacgttt
      541 aagtttgtga tgttgcccga tccgtcggcg gaaatttggg cggtgtattt gggcattgtc
      601 ggcggctatg cggtggcgcg ttcatttgtc agcgtgaagc gtcaggaggt cgagaatgaa
      661 tctcgtgaaa ctgctggcga ataactggca accgattgcc
//
LOCUS       DAXHRP010000288          667 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.288, whole genome shotgun sequence.
ACCESSION   DAXHRP010000288 DAXHRP010000000
VERSION     DAXHRP010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.288"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..341)
                     /locus_tag="ACFM72_002149"
     CDS             complement(<1..341)
                     /locus_tag="ACFM72_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC6258642.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASVSRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQA"
     gene            complement(325..642)
                     /locus_tag="ACFM72_002150"
     CDS             complement(325..642)
                     /locus_tag="ACFM72_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC6258643.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
BASE COUNT          186 a          136 c          123 g          222 t
ORIGIN      
        1 gcctgtatgt cttctttgaa agtttcgtat acgtcatggg ctaaaagggc tgttccgaca
       61 tagggaaccg cccttgtgct gaatttcgcg cctaagcggg caagtttgcc gccccccgcc
      121 aatacgccgg cgcgggatac gctggcggtt attttggcgt tgattcgggc ttttgcgccc
      181 gtagggatgt gtgttaaatc taccgttttt attaaatcag atgaataagt tttactattt
      241 ttaggtacaa acttatgaat tttcgcacct tgtccggtat caactgaaac agtttcagat
      301 atttttactg catttgcatt cgcttcaaac gaatacatca tcaaaattgc aattatcgac
      361 aatttcgcaa aattcaaatt tgtatatttt atgaccatct ttcagagatt ctttaattac
      421 catttctgaa ttatcagaaa atgagattag ccaaatatca tgtttaattc ttctattcca
      481 gaaaaaagag aaacaatcaa taacattttc agacttatta atcttcgcaa attcaacaaa
      541 ttcagattgc gctataaccg ccatcgattg cccaaaatac ttgcttgacg gctgatattt
      601 ataaagtgcc aactgcgcct gagtgataaa cggcttgttc atggttctgc ctttcaaagg
      661 ttgtttt
//
LOCUS       DAXHRP010000289          659 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.289, whole genome shotgun sequence.
ACCESSION   DAXHRP010000289 DAXHRP010000000
VERSION     DAXHRP010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.289"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            430..>659
                     /locus_tag="ACFM72_002151"
     CDS             430..>659
                     /locus_tag="ACFM72_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family N-terminal domain-containing
                     protein"
                     /protein_id="HFC6258644.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTT"
BASE COUNT          204 a          139 c          126 g          190 t
ORIGIN      
        1 tttctgtttt tgattttctg ttttcgtagg aatgacggtt taaaagttac ccgaaacctc
       61 aaaaaaaagg ctgtgtttta atatagtgtt gatagacgta cttggcttcc atgtattcaa
      121 tcgtggaaat ctatatcttc gtcctcgccg aaatagtcta tgcccgatat acaattttga
      181 tacacaaact tggaaatatg ggtatcgtcg ccggagcgat agaatgcgga cagttatata
      241 tatacggttt ttttagggaa gcgggcagat gaagggcgga ttttgaatta accccatgca
      301 aattgacttt tgcaggcggt tttacctccc atatatttac aaaagccaaa tttttaaaca
      361 tatatccttg atatatacac ggcgtaaaca tatactggaa acatctttaa attttccgaa
      421 attttaaaca tgagcaactg gaaacccgat attccctata acgatttacc acccctgccg
      481 ccaaaacagg atattgaaag caaaaccatc ctgaaacgtt gtatagccgc ccgtgcatcc
      541 cttgcccgtt taaagcaggc ggcagaactg ataccgaatc aagccatgct gattaacacc
      601 cttcctgtta tggaagcccg tgcaagttcg gaaattgaaa acatcgtaac cacaacgga
//
LOCUS       DAXHRP010000290          650 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.290, whole genome shotgun sequence.
ACCESSION   DAXHRP010000290 DAXHRP010000000
VERSION     DAXHRP010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.290"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(49..534)
                     /locus_tag="ACFM72_002152"
     CDS             complement(49..534)
                     /locus_tag="ACFM72_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HFC6258645.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRNGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          191 a          204 c          121 g          134 t
ORIGIN      
        1 aaaccggaaa aatgccgtct gaatcttcag acggcattcc attcatattt attcgtcttt
       61 tttgtgttcg atggcgtttc gggaacgatt gccgccgtaa ggctcttcaa ccgtatattc
      121 cccctcgata atatcgtcat cgcgggaaaa gccctctttt ctgcccgatt ggttcatgtt
      181 gaaaaaattt tccgcacctc ctgcctgcaa cactgcccct cccttaaacg gcagcagcag
      241 caataccgcc aacaccgagg atacgaatcc cggactcatc agacacacag ccgccaccgt
      301 ataacggata ggccacaaca tctgataaac ggatactctt ccgccgtttc tcattgccgc
      361 gcccgccaat aaaagaccgg acagccccgt atgcctgagc atcagcacgc cggcggcaaa
      421 ggttgccgcc attagaaaca gcgtccaacc gccgcccaac caatcggcaa cccacacaat
      481 cgacataatc tccaaaaaca gcagcaccaa aaaaccgata ccgaaaaatc tcattgaccg
      541 tcatccttat atttaagtaa acagcaaacc gcccgaacag gactccaagc gacctgcctg
      601 taaatgatta caaaaccatg tgcttcaagc cgaaacaatg tgaaatcacg
//
LOCUS       DAXHRP010000291          639 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.291, whole genome shotgun sequence.
ACCESSION   DAXHRP010000291 DAXHRP010000000
VERSION     DAXHRP010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.291"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(162..548)
                     /locus_tag="ACFM72_002153"
                     /pseudo
     CDS             complement(162..548)
                     /locus_tag="ACFM72_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          123 a          136 c          179 g          201 t
ORIGIN      
        1 aattttaggt tgctgttttt ggttttctgt ttttgaggga atgatgaaat tttaagtttt
       61 aggaatttat cagaaaaaac agaaaccgct ccgccgtcat tcccgcgcag gcgggaatcc
      121 aggtctgtcg gtacggaaac ttatcgggta aaaaggtttc tctagtttgg tgtcgatttt
      181 cttgtcggtg ctgttgacgg caggtgcttg gtgttgatgt tggcggtgcc cttgccggtg
      241 gcggcggtga cggcgtcgtc tttggctttg tcgcgcgtaa ccggctgtcc gcagaaccat
      301 tttaccgaac cgtcttgacg cttggcccac agggagagtt ttttgccttt gatttcgttg
      361 tttacgccgg ttgaaagcat tgtggcggta acgacgccgt ttttgacttc aacgctttta
      421 acatatttgc ctttgattgt tgaagaagat gccacgccgg cagaactgtt gtcgccgggc
      481 catatgccgt gattcaggta atactctgtg acggctgatt tttgaccttc agccaaaaga
      541 atggattcgt cattcccgcg caggcgggaa tccagccttg tcggtacgga aacttatcgg
      601 gaaagcggtt tcttgagatt ttgcgttctg gattcccac
//
LOCUS       DAXHRP010000292          630 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.292, whole genome shotgun sequence.
ACCESSION   DAXHRP010000292 DAXHRP010000000
VERSION     DAXHRP010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.292"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(157..441)
                     /locus_tag="ACFM72_002154"
     CDS             complement(157..441)
                     /locus_tag="ACFM72_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC6258646.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMLVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII"
BASE COUNT          188 a          164 c          102 g          176 t
ORIGIN      
        1 gaatctctaa agcttcagct aacctttgaa tattactgtt gttctaaggt ctggattccc
       61 gcctacgcgg gaatgacggt ttagaagttg cccgaaacct caaaaaaaaa accgaaaccg
      121 aacaagccgg attcccgcct gcgcgggaat gacgggctaa ataatatcaa accataaatc
      181 ctgccaagaa acattatttt cttcaatcag ttgcaatttc caagccctgt tccatttctt
      241 caactgtttt tcccgagtaa ttgcactctc catcgtagga tgcagttcat accaaaccag
      301 catagtaacg ttgtaccgtg atgtaaatcc ctcaatcaaa tgctccctat gttggtaaat
      361 acgttgcacc aaatcagatg taacgccaat gtataacgtg ccattacgtt ggcttgctaa
      421 aatataaacc gcaggctgca tataataccc ttttgaatta tttcaattta tattcccgcg
      481 aacaccatcc cgtgattact ttaacccttc gttattccca tagctttcca tcattcccgc
      541 aactcttcgt cattcccgcg aaagtgggaa tctagaacgc aaaatctaaa gaaaccgttt
      601 tacccgataa gtttccgcac cgacaaacct
//
LOCUS       DAXHRP010000293          612 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.293, whole genome shotgun sequence.
ACCESSION   DAXHRP010000293 DAXHRP010000000
VERSION     DAXHRP010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.293"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            296..>612
                     /locus_tag="ACFM72_002155"
     CDS             296..>612
                     /locus_tag="ACFM72_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258647.1"
                     /translation="MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSN
                     LIA"
BASE COUNT          227 a          115 c          137 g          133 t
ORIGIN      
        1 aacctaatgt acgataattg ggaagaacgc gggaaaccgt ttgaaggaat cggcgggggc
       61 gtggtcggat cggcaaactg aagaaaacgg caagagagaa aaaagacccg taaaccgttt
      121 gaatatagac ggtttacggg tctttgtttc gcgcaaagca agggctaagg cagtcaggca
      181 gcaaatcccg caatgtatta aaacagacgc gtagaaatgc cggctgcctt tatccatcct
      241 cgaaattgaa tatcatccta gccgtatcaa ggctgtataa ataaggaaaa taccaatgaa
      301 tataatcggg ctggacatct caaaggacac catagacgca acattgcata aaacaaacgg
      361 aagtatccat tacattaaat ttaagaataa tgatgatgga ttaaaacagt ttagattgtg
      421 gataaaggga aacagaatca gaaaagtcta tatcggcatg gaggcaacag gcatctatta
      481 cgaaaaggca gcagatatgc tttcttccta ctatactgtt tacgttatta atcccttaaa
      541 aatcaaggac tacggaaaaa gcaggtttaa ccgtaccaaa accgacaaag cagattcaaa
      601 cctgatagca ga
//
LOCUS       DAXHRP010000294          612 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.294, whole genome shotgun sequence.
ACCESSION   DAXHRP010000294 DAXHRP010000000
VERSION     DAXHRP010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.294"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..425
                     /locus_tag="ACFM72_002156"
     CDS             <1..425
                     /locus_tag="ACFM72_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258648.1"
                     /translation="GGYRSGTSEKGFQAVFGRVVTVENVIRLPEKFGRFSGSLWYWAQ
                     QTQVQIRRCAVIVRMPIQPKQTSVFRKWMFDGAKVVRRMEGNLWVFGMVALEKTCFKG
                     QMPSENRFQTAFSVYLKQTGKGSNILQSSYSHKRFIVN"
     gene            529..612
                     /locus_tag="ACFM72_002157"
                     /pseudo
     CDS             529..612
                     /locus_tag="ACFM72_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          195 a           98 c          157 g          162 t
ORIGIN      
        1 ttggggggta tcggagtgga acgtctgaaa aagggtttca ggcggtcttt gggcgtgtgg
       61 tgacagtcga aaacgtgata aggctacctg aaaagtttgg gagattttca ggtagccttt
      121 ggtattgggc gcaacagacg caggtacaga ttaggcggtg tgccgtaatc gtacgaatgc
      181 cgattcaacc taagcagaca tcagtattta ggaagtggat gtttgatgga gcaaaggttg
      241 tacgaaggat ggaaggcaac ctgtgggtgt ttggtatggt cgcgcttgaa aaaacgtgtt
      301 ttaagggaca aatgccgtct gaaaatcggt ttcagacggc attttctgtt tatttaaagc
      361 aaacaggaaa aggcagcaat attctgcagt cttcctattc acacaagcgt tttatagtta
      421 attaaaaaca aaatagtaca atactcaact ttgaaggtct aaccatggca tactctgcgg
      481 acttaagaaa caaagcttta aactaggggc tatactagat tagcagatat gttaccctag
      541 aaatatgaag ataacacact gcaaattaaa gaaaaaagta caaaaagaac tgctccgttt
      601 tttgtgctgg aa
//
LOCUS       DAXHRP010000295          599 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.295, whole genome shotgun sequence.
ACCESSION   DAXHRP010000295 DAXHRP010000000
VERSION     DAXHRP010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.295"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..138)
                     /locus_tag="ACFM72_002158"
     CDS             complement(<1..138)
                     /locus_tag="ACFM72_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC6258649.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YL"
BASE COUNT          197 a           92 c          153 g          157 t
ORIGIN      
        1 gaggtaacgg gttttttgac ggttcaggta ctgctcgatc ggctgccaat caatcacctg
       61 gtccaacttc aatagcggga agcggtcgat gtgtttggca atcatggctt gtgcggtttg
      121 ctgaaagaag gtgctcatga gaaatcccct aaatgtcttg gtgggaattt aggggatttt
      181 ggggaatttt gcaaaggtct cagacggcat ttttgtcaga aaggaaaacg gcaatatcca
      241 ctatacacac ggaagcagtc caaagatgtg aaaaccgtgt gtataagtta gtttgcgtat
      301 tgaaattaaa agataaaaat acgatgatta aaaaataggc ataagaaaag ataaacacag
      361 ccggtgtttg ccggtgtgtg tatcttttgt ggaaaaacat cttaatgtca tgtattttat
      421 ggaaaataat aacatgatta aaaaatagtc aatcattaag gttcaggtgg gcggctgcaa
      481 ccgtcaatgt ctgaaaagag gcagtgctgt ttaagtatgg aaagtcggat atagtggatt
      541 aacaaaaatc aggacaaggc gacgaagccg cagacagtac aaatagtacg gaaccgatt
//
LOCUS       DAXHRP010000296          587 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.296, whole genome shotgun sequence.
ACCESSION   DAXHRP010000296 DAXHRP010000000
VERSION     DAXHRP010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.296"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..318
                     /locus_tag="ACFM72_002159"
     CDS             <1..318
                     /locus_tag="ACFM72_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258650.1"
                     /translation="HLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEY
                     TIRDEADFAWHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
     gene            355..587
                     /locus_tag="ACFM72_002160"
                     /pseudo
     CDS             355..587
                     /locus_tag="ACFM72_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          149 a          135 c          151 g          152 t
ORIGIN      
        1 catcttcata ccatatggcg gctgccggac aatgattctg cttattcgga acgctggcgg
       61 caaatcaagc ggcacagcca atatttaatc ggcggcaatc tcaggctttg gcaaaaacgc
      121 ttttgggaat atactatccg cgatgaggcc gattttgcct ggcattttga ttatctgcat
      181 ttcaatccgg tcaaacatgg ctatgtagga caaatttccg attgggggtt ttctacgttt
      241 caccgttatg tcaaacaggg tatttatccg cataattggg gtggcggcaa tgcggacttt
      301 tctattggat acgattgaag taatgtcgga ttcgagaatc cgacctacgg aaaactgaaa
      361 gagcatcggc tgcaggacgg cattatgcgc aaagcctgcc gcaaccgtcc gctggcggaa
      421 gtgcaaacca aacgtaaccg atatttatcg aagacccgtt atgtggtcga gcaaagcttc
      481 ggtacgctgc accgtaagtt ccgctatgct cgggcagcct atttcgggct gctcaaagtg
      541 agtgcgcaaa gccatctgaa agcgatgtgt ttgaaccttt tgaaagc
//
LOCUS       DAXHRP010000297          576 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.297, whole genome shotgun sequence.
ACCESSION   DAXHRP010000297 DAXHRP010000000
VERSION     DAXHRP010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.297"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            17..328
                     /gene="rpsJ"
                     /locus_tag="ACFM72_002161"
     CDS             17..328
                     /gene="rpsJ"
                     /locus_tag="ACFM72_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HFC6258651.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            470..>576
                     /locus_tag="ACFM72_002162"
     CDS             470..>576
                     /locus_tag="ACFM72_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC6258652.1"
                     /translation="MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQRTRYL"
BASE COUNT          173 a          147 c          118 g          138 t
ORIGIN      
        1 tgaaggatat tgataaatgg caaaccaaaa aatccgtatc cgcctgaaag cttatgatta
       61 cgccctgatt gaccgttctg cacaagaaat cgttgaaact gcaaaacgta ccggtgcagt
      121 tgtaaaaggc ccgattcctt tgccgaccaa aatcgagcgt ttcaacattt tgcgttctcc
      181 gcacgtgaac aaaacttccc gtgagcaatt ggaaatccgc acccacttgc gcctgatgga
      241 catcgtggat tggaccgata aaactaccga tgcgctgatg aagctggatt tgccggccgg
      301 tgttgatgta gaaatcaaag tccaataatt cggactataa aaaatcccca agcaatcaat
      361 gcttggggat tttttatgtt atgccgagac ctttgcaaaa ttccccaaaa tcccctaaat
      421 tcccaccaag acatttagga gcaccttctt ccagcaaacc gcccaagcca tgattgccaa
      481 acacatcgac cggttcccac tattgaagtt ggaccgggta attgattggc agccgatcga
      541 acagtacctg aatcgtcaaa gaacccgtta ccttag
//
LOCUS       DAXHRP010000298          574 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.298, whole genome shotgun sequence.
ACCESSION   DAXHRP010000298 DAXHRP010000000
VERSION     DAXHRP010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.298"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>574
                     /locus_tag="ACFM72_002163"
     CDS             <1..>574
                     /locus_tag="ACFM72_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC6258653.1"
                     /translation="VVDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWIKKN
                     GLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLPPLLEGLPEGTTVYADKGYDSAE
                     NRQHLEEHQLQDGIMRKACRNRPLTEVQTKRNRYLSKIRYVVEQSFGTLHRKFRYARS
                     TYFGLIKVSAQSHLKAMCLNLLKAANRLSAP"
BASE COUNT          169 a          159 c          147 g           99 t
ORIGIN      
        1 gtcgttgacg ccaccattat tcagaccgcc ggcagcaaac agcgccaggc catagaagtc
       61 gatgaagaag gacaagtcag cggccaaacc acaccgagta aggacagcga tgcccgttgg
      121 ataaagaaaa acggcctcta caaactcggt tacaaacaac atacccgcac cgatgcggaa
      181 ggctatatcg agaaactgca catcaccccc gccaatgccc atgagtgcaa acacctgccg
      241 ccgttgttgg aagggttacc cgaaggtacg accgtctatg ccgacaaagg ctatgacagt
      301 gcggaaaacc ggcaacatct ggaagaacat cagttgcagg acggcattat gcgcaaagcc
      361 tgccgcaacc gtccgctgac ggaagtgcaa accaaacgca accgatattt gtcgaagatc
      421 cgttatgtgg tcgaacaaag cttcggtacg ctgcaccgta aattccgcta tgcgcggtca
      481 acctatttcg gactgattaa agtgagtgcg caaagccatc tgaaggcgat gtgtttgaac
      541 ctgttgaaag ccgccaacag gctaagtgcg cccg
//
LOCUS       DAXHRP010000299          571 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.299, whole genome shotgun sequence.
ACCESSION   DAXHRP010000299 DAXHRP010000000
VERSION     DAXHRP010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.299"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            77..364
                     /locus_tag="ACFM72_002164"
     CDS             77..364
                     /locus_tag="ACFM72_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258654.1"
                     /translation="MDDLIAAFLGYLSGKYSEGKISRLEISLTAGSTFFAVFFIHELI
                     IFIVDGNKENLWNFITGIMKDLFLFSCSVCLLFYFLLFIAETIGKTINKIK"
BASE COUNT          196 a           66 c           89 g          220 t
ORIGIN      
        1 aatttaatcc actataaata atggcaaaac aggtaatgaa ttaaagacat tacctgtttt
       61 tacagaaatt tttaaaatgg atgatttgat tgcagctttt ttaggctatt tatcaggtaa
      121 atatagcgaa gggaaaataa gcagattaga aatatcccta acggcaggaa gtactttctt
      181 tgcagtattc tttattcatg aactgataat ttttattgtt gatggaaata aggaaaatct
      241 ttggaatttt attactggga taatgaaaga tttattttta ttttcatgtt ctgtttgttt
      301 attattctac ttcttattat ttattgcgga aactattggg aaaacaatca ataaaattaa
      361 ataagatatt taagccgcta aaaaccattt aagtatttta tcttttctat gcggcattta
      421 tcttggaatt gaaatactgc aatcgggagg ctaaggcttc cgttgtaacg tttaccatat
      481 atttcattat tttaatttca tcaaaaaaag aaattcaaga ttatacatac tgccaatagt
      541 ttcttgattg ttttgtatag tggagtaaat t
//
LOCUS       DAXHRP010000300          559 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.300, whole genome shotgun sequence.
ACCESSION   DAXHRP010000300 DAXHRP010000000
VERSION     DAXHRP010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.300"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(141..>559)
                     /locus_tag="ACFM72_002165"
     CDS             complement(141..>559)
                     /locus_tag="ACFM72_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HFC6258655.1"
                     /translation="NDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGFKAA
                     DVHFIRSGSDLVLSASEQDNVRISGFFYGENHRVDTFVFDDAAISNPDFAKYINAGNN
                     LVQSMSVFGSNTAATGGNVDANTQSVQQPLLVTPSA"
BASE COUNT          179 a          122 c          101 g          157 t
ORIGIN      
        1 tgtgaatcca ctatattgct agaagtgcac cgattaaggt taattaaaat acgaccctta
       61 tcccaatatt aagaaaaaca gcaatcaaaa taaacttgat tgctgttttt cagtttaagc
      121 catgaatgtg attaggctcc ttatgcagat ggcgttacca ataacggctg ctgtacggat
      181 tgtgtattgg catccacatt tcctcctgtc gcagcagtat tagaaccgaa cacagacata
      241 gactgtacca aattattgcc agcattaata tacttggcaa aatctggatt actgatagct
      301 gcatcatcaa agacaaatgt atctacacga tggttttcac catagaagaa tccggaaata
      361 cgtacgttgt cttgttcaga agcgctaagc accaaatcac ttccggaacg gataaaatga
      421 acatctgctg ctttaaatcc tttaaagtgc atagtgtcag agtttttatc cacatggtaa
      481 ttatagaccg tatcctgacc gaagcctttg ccgaagacat aagtatccga accgctgccg
      541 ccctccaagt aatcattac
//
LOCUS       DAXHRP010000301          539 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.301, whole genome shotgun sequence.
ACCESSION   DAXHRP010000301 DAXHRP010000000
VERSION     DAXHRP010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.301"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(156..>539)
                     /locus_tag="ACFM72_002166"
     CDS             complement(156..>539)
                     /locus_tag="ACFM72_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC6258656.1"
                     /translation="AASAVCTKTPEYYPNHGEWPSDNSAAGVASSSTIKGKYVEKVEV
                     KNGVITAEMKSSGVNKEIQGKKLSLWAKRQDGSVKWFCGQPVTRNAANAKAGTDEVTA
                     ATPDTDKINTKHLPSTAPTRKSTPN"
BASE COUNT           92 a          114 c          158 g          175 t
ORIGIN      
        1 aggtttctgt ttgtgggttt ctgttcttgt gggaatgatg aaattttaag ttttaggaat
       61 ttatcggaaa aaacagaaac cgctccgccg tcattcccgc gcaggcggga atccagcctt
      121 gtcggtacgg aaacttatcg ggtaaaaagg tttctctagt ttggtgtcga ttttcttgtc
      181 ggtgctgttg acggcaggtg cttggtgttg attttgtcgg tgtcgggtgt ggcggcggtg
      241 acttcgtcgg tgccggcttt ggcgttggcg gcgttgcgcg taaccggctg tccgcagaac
      301 cattttaccg aaccgtcttg acgcttggcc cacagggaga gttttttgcc ttggatttct
      361 ttgtttacgc cgcttgattt catttcggcg gtaatgacgc cgtttttgac ttcaactttc
      421 tcaacatatt tgcctttgat tgttgaagaa gatgccacgc cggcggcact attgtcggac
      481 ggccattcgc cgtgattcgg gtaatactcg ggtgtttttg tgcaaacggc agatgctgc
//
LOCUS       DAXHRP010000302          537 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.302, whole genome shotgun sequence.
ACCESSION   DAXHRP010000302 DAXHRP010000000
VERSION     DAXHRP010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.302"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(300..>537)
                     /locus_tag="ACFM72_002167"
     CDS             complement(300..>537)
                     /locus_tag="ACFM72_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC6258657.1"
                     /translation="MLSTGVNNEIKGKKLSLWAKRQAGSVKWFCGQPVTRAANAKDDV
                     AAATGTDKIDTKLKKPFYPISFRTDEAGFPLLRE"
BASE COUNT          116 a          104 c          143 g          174 t
ORIGIN      
        1 gaattttaag tttctgtttt tggttttctg tttttgtagg aatgatgaaa ttttaagttt
       61 gaggaattta tcggaaaaaa cagaaaccgt tccgccgtca ttcccgcgca ggcgggaatc
      121 cagcctcgtc ggtgcggaaa cttatcggga aaacggtttc tttagatttt acgttctgga
      181 ttcctacttt cgtgggaaag acgaatttta ggtttctgtt tttggttttc tgtccttgtg
      241 ggaatgatga aaatttaagt tttaggaatt tatcggaaaa aacagaaacc gctctgccgt
      301 cattcccgca aaagcgggaa tccagcctcg tcggtgcgga aacttatcgg gtaaaaaggt
      361 ttctttagtt tggtgtcgat tttgtcggtg ccggtggcgg cggcaacgtc gtctttggcg
      421 ttggcggcgc gcgtaaccgg ctgtccgcag aaccatttta ccgaaccggc ttgacgcttg
      481 gcccacaggg agagtttttt gcctttgatt tcgttgttta cgccggttga aagcatt
//
LOCUS       DAXHRP010000303          534 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.303, whole genome shotgun sequence.
ACCESSION   DAXHRP010000303 DAXHRP010000000
VERSION     DAXHRP010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.303"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          174 a           99 c           74 g          187 t
ORIGIN      
        1 attatggtag atactaactc tttagttaaa aataatttac taacttttac tacttaggta
       61 taaattccaa tacttaacta aactgagggt aaatatattt atccaagata gaagagaaac
      121 ttttttctct gtttccgcaa gaatagttac gggttgtgaa atatgctcta tacccaagca
      181 gtagatattt tcattgttac ttaccgtatt gcttcataga attggcactc tacgctttcc
      241 tttaaaaatc gtcaataacg attatcattt tctttaaatt tattcaaaac aatattctta
      301 tacacatctc aagcccgctg aaataaagca aaatggtggt tcatcgactg taatgccaat
      361 ttcaaagcag cctgcacttt gacaacacac gagaaatacg ggaagaacag ggcatcagca
      421 tatatttcag cccgaagccg tttcattcgt ttaaaaaact gcttttttca caatttacct
      481 ttacaaagcc tatacgtatc cttacaattt gttttgctgt ttttggtata tttt
//
LOCUS       DAXHRP010000304          533 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.304, whole genome shotgun sequence.
ACCESSION   DAXHRP010000304 DAXHRP010000000
VERSION     DAXHRP010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.304"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>533
                     /locus_tag="ACFM72_002168"
     CDS             <1..>533
                     /locus_tag="ACFM72_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFC6258658.1"
                     /translation="VRDNTDLKGGIITSTRSAESKGKNRFQTATLTHRDIQNHSRYEG
                     RSFGIGGSFDLNGGWDGTVTDKQGRPTDRISPAAGYGSDGDSKNSTTRSGVNTRNIHI
                     TDEAGQLARTGRTAKETEARIYTGIDTETAAQHTGRLKNSFDKDAVAKEINLQREVTK
                     EFGRNAAQAVAAVADKLG"
BASE COUNT          169 a          170 c          140 g           54 t
ORIGIN      
        1 gtcagagaca acacagacct caagggcggt atcatcacct ccacccgaag tgccgaaagc
       61 aaagggaaaa accgctttca gacggccacc ctcacccatc gcgacattca aaaccacagc
      121 cgctacgaag gcagaagctt cggcataggc ggcagtttcg acctgaacgg cggctgggac
      181 ggcacggtta ccgacaaaca aggcaggcct accgacagga taagcccggc agccggctac
      241 ggcagcgacg gagacagcaa aaacagcacc acccgcagcg gcgtcaacac ccgcaacata
      301 cacatcaccg acgaagcggg acaacttgcc cgaacaggca ggactgcaaa agaaaccgaa
      361 gcgcgtatct acaccggcat cgacacagaa actgcagccc aacacacagg tcgtctgaaa
      421 aacagcttcg acaaagacgc ggtcgccaaa gagatcaacc tgcaaaggga agtaacgaag
      481 gagttcggca gaaacgccgc ccaagccgta gcggccgttg ccgacaaact cgg
//
LOCUS       DAXHRP010000305          533 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.305, whole genome shotgun sequence.
ACCESSION   DAXHRP010000305 DAXHRP010000000
VERSION     DAXHRP010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.305"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>533
                     /locus_tag="ACFM72_002169"
     CDS             <1..>533
                     /locus_tag="ACFM72_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFC6258659.1"
                     /translation="VGNHTDLKGGIITSGKSAEDKGKNLFQTATLTASDIQNHSRYEG
                     KSFGIGGSFDLNGGWDGTVTDKQGRPTDRISLAAGYGSDSDSQSSITKSGINTRNIHI
                     TDEAGQLARTGRTAKETEARIYTGIDTETADQHTGRLKNSFDKDAVAKEINLQREVTK
                     EFGRNAAQAVAAVADKLG"
BASE COUNT          172 a          161 c          139 g           61 t
ORIGIN      
        1 gtcggaaacc atacagacct caagggcggt atcatcacct ccggcaagag tgccgaagac
       61 aaaggaaaaa acctttttca gacggccacc cttactgcca gcgacattca aaaccacagc
      121 cgctacgaag gcaaaagctt cggcataggc ggcagtttcg acctgaacgg cggctgggac
      181 ggcacggtta ccgacaaaca aggcaggcct accgacagga taagcctggc agccggctac
      241 ggcagcgaca gcgacagtca aagcagcatc acaaaaagcg gcatcaacac ccgcaacata
      301 cacatcaccg acgaagcggg acaacttgcc cgaacaggca ggactgcaaa agaaaccgaa
      361 gcgcgtatct acaccggcat cgacaccgaa actgcggatc aacacacagg ccgtctgaaa
      421 aacagcttcg acaaagacgc ggtcgccaaa gagatcaacc tgcaaaggga agtaacgaag
      481 gagttcggca gaaacgccgc ccaagccgta gcggccgttg ccgacaaact cgg
//
LOCUS       DAXHRP010000306          533 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.306, whole genome shotgun sequence.
ACCESSION   DAXHRP010000306 DAXHRP010000000
VERSION     DAXHRP010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.306"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(168..>533)
                     /locus_tag="ACFM72_002170"
     CDS             complement(168..>533)
                     /locus_tag="ACFM72_002170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258660.1"
                     /translation="GAVSVFSGKYPQAKIPLFSQKQKTKNRNLKFVIPTNLHPVIPTK
                     VGIQFFEFQSFPINCLSIECLDSRLRGNDGGAVSIFSGKYPQAKILLFSQKQKTKNRN
                     LKFVIPAQAGIWFVRFRLF"
BASE COUNT          159 a           99 c          124 g          151 t
ORIGIN      
        1 ttcaatacta aggcaattta ttgaaaatga ctgaaactca aaaaactgga ttcccacttt
       61 tgtgggaatg acgggattag agtttcaaaa tttattctaa atagctgaaa ctcaacgaac
      121 tggattcccg cctgcgcggg aatgacgaag tggaagttac ccgaaactta aaacaagcga
      181 aaccgaacga accagattcc cgcctgcgcg ggaatgacga atttcaggtt tctgtttttg
      241 gttttctgtt tttgtgaaaa taacaggatt ttagcttgtg ggtatttacc ggaaaaaata
      301 gaaaccgctc cgccgtcatt cccgcgcagg cgggaatcca gacattcaat gctgaggcaa
      361 tttatcggaa atgactgaaa ctcaaaaaac tggattccca ctttcgtggg aatgacggga
      421 tgtaggttcg tgggaatgac gaatttcagg tttctgtttt tggttttctg tttttgtgaa
      481 aataacggga ttttagcttg tgggtattta ccggaaaaaa cagaaaccgc tcc
//
LOCUS       DAXHRP010000307          523 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.307, whole genome shotgun sequence.
ACCESSION   DAXHRP010000307 DAXHRP010000000
VERSION     DAXHRP010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.307"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(36..>523)
                     /locus_tag="ACFM72_002171"
     CDS             complement(36..>523)
                     /locus_tag="ACFM72_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258661.1"
                     /translation="KKDIFYCEQWSYGYKRLHKPFSEKQAEEKHLKGELYTAVIGSAT
                     QPEYVITLREEVGFFSVNFFDKFGRDYLTHQFRKYSNSNYYFLSTAVWRDYITLESHD
                     LAEGYTYFFNENTDDCYVLKQDFINNERYEKTELYPQKDKVILFPKFGEYDLVLNPDI
                     I"
BASE COUNT          181 a          100 c           65 g          177 t
ORIGIN      
        1 cgtctgaaat tttttcagac ggccttaaaa ctcaattaaa taatgtccgg atttaacacc
       61 aaatcatatt cgccaaactt tggaaataga attaccttat ctttttgggg atataattct
      121 gttttttcat atcgctcatt attaataaaa tcttgtttca aaacatagca atcatccgta
      181 ttttcattga agaaataagt atatccttct gctaagtcat gagattccaa agttatataa
      241 tctctccata cagccgtaga aagaaaataa taattcgaat tagaatattt tcgaaattga
      301 tgggttaaat aatcccttcc aaatttatcg aaaaaattta ccgaaaaaaa acctacttcc
      361 tctcgcaagg taattacata ttcaggttgt gtcgccgaac ctattacggc agtatataac
      421 tcccctttaa gatgtttttc ctcagcttgt ttctcagaaa aaggcttatg aagtctctta
      481 taaccataag accactgctc acaataaaaa atatctttct tca
//
LOCUS       DAXHRP010000308          511 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.308, whole genome shotgun sequence.
ACCESSION   DAXHRP010000308 DAXHRP010000000
VERSION     DAXHRP010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.308"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..230)
                     /locus_tag="ACFM72_002172"
     CDS             complement(<1..230)
                     /locus_tag="ACFM72_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family N-terminal domain-containing
                     protein"
                     /protein_id="HFC6258662.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTT"
BASE COUNT          143 a           89 c          111 g          168 t
ORIGIN      
        1 tccgttgtgg ttacgatgtt ttcaatttct gaacttgcac gggcttccat aacaggaagg
       61 gtgttaatca gcatggcttg attcggtatc agttctgccg cctgctttaa acgggcaagg
      121 gatgcacggg cggctataca acgtttcagg atggttttgc tttcaatatc ctgttttggc
      181 ggcaggggtg gtaaatcgtt atagggaata tcgggtttcc agttgctcat atttaaaatt
      241 tcaaaaaatt taaagatgtt tccagtatat gtttacgccg tgtatatatc aaggatatat
      301 gtttaaaaat ttggcttttg taaatatatg ggcggtaaaa ccgcattatt ttatgttgtt
      361 acctatttta caccttgtct gcacacgatt tccaaacaac ctaaaaagaa acctgccgaa
      421 aggcaggttt aaagaggtca ttttaaatgt gaactaaagt ttacaccctc ggagggtatc
      481 gcgtatatca gacgtactta atatacacta t
//
LOCUS       DAXHRP010000309          487 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.309, whole genome shotgun sequence.
ACCESSION   DAXHRP010000309 DAXHRP010000000
VERSION     DAXHRP010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.309"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          147 a           68 c          112 g          160 t
ORIGIN      
        1 gcaacgccgt actggttttt gttaattcac tatattgcat ggtgcagcat taaatcagtc
       61 ttctagcgcc gcaatgggaa aacatagaag ataaacgaaa tggatgatct aatactatat
      121 tttttatcag gtatattcgg aaatcaagtt gctgaatata ttataaaaaa caaccgtgag
      181 ataaaagttc cctttattgt gctttacgca atatttttta cgttgattta tactgtggct
      241 ttgttgtttc tcagtctaat ctattgggtc aatggtgcgg agattgcatg gaaggggata
      301 ggtattttca gtatgtcggt cagtttttgt atagtcttct gtctttattt gattgacaag
      361 gcaggaagat gtaaggataa gaaacaatag ggatcagatg cggcagcaaa cgtagattgg
      421 gtctaggctc aacctgcgtt tgctgcatct ttggaagaaa tagtggattc gaaaaaatag
      481 gaagaat
//
LOCUS       DAXHRP010000310          478 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.310, whole genome shotgun sequence.
ACCESSION   DAXHRP010000310 DAXHRP010000000
VERSION     DAXHRP010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.310"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            161..>478
                     /locus_tag="ACFM72_002173"
     CDS             161..>478
                     /locus_tag="ACFM72_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HFC6258663.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPEAIDYVDERKGVP
                     LAAMRHILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILRSVNSTDPEPFFFPCDM
                     LNIQ"
BASE COUNT          151 a           94 c          100 g          133 t
ORIGIN      
        1 caaatagctt acctgatggt agtcctgcta aagctgctgt cttcaaagcg gagcgggaag
       61 gcaaattaaa aacggcaata gcaggcgttg atcgtcaaac aggtaaggcc gttattcttt
      121 ctgtcaaagt tccttctaaa accaatataa ggagataaca atggggcaca atatgatgac
      181 cacccaaaaa tggtatgagc atattactaa tgtaatcata ggcaatactg ctaatttcaa
      241 tagcggttgc cctgaagcta tagattatgt agatgaaaga aaaggcgttc cgcttgcagc
      301 gatgagacat attttaatgt atactgaagc tgcggcttcc catgcctatc tatttgaaca
      361 tgatcttaag aaattcaagc aatatgctta tgttgcagga aagctgggta ttttgcggag
      421 tgtaaattct acagaccctg aacccttctt ctttccctgt gacatgctca acattcaa
//
LOCUS       DAXHRP010000311          475 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.311, whole genome shotgun sequence.
ACCESSION   DAXHRP010000311 DAXHRP010000000
VERSION     DAXHRP010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.311"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..318
                     /locus_tag="ACFM72_002174"
     CDS             <1..318
                     /locus_tag="ACFM72_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258664.1"
                     /translation="HLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEH
                     TIRDEADFSCHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
     gene            355..475
                     /locus_tag="ACFM72_002175"
                     /pseudo
     CDS             355..475
                     /locus_tag="ACFM72_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          128 a          106 c          114 g          127 t
ORIGIN      
        1 catctgcata ccatatggcg gctgccggac aatgattctg cttattcgga acgctggcgg
       61 caaatcaagc ggcacagcca atatttaatc ggcggcaatc tcaggctttg gcaaaaacgc
      121 ttttgggaac atactatccg cgatgaggcc gatttttcct gccattttga ttatctgcat
      181 ttcaatccgg tcaaacatgg ctatgtagga caaatttctg attggcggtt ttctacgttt
      241 caccgttatg ttaaacaggg tatttatccg cataattggg gtggcggcaa tgcggacttt
      301 tctattggat atgattgaag taatgtcgga ttcgagaatc cgacctacgg aaaactgaaa
      361 gagcatcggc tgcaggacgg cattatgcgc aaagcctgcc gcaaccgtcc gctgacggaa
      421 acgcaaacca aacgtaaccg atatttatcg aagacccgtt atagtggatt aaatt
//
LOCUS       DAXHRP010000312          471 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.312, whole genome shotgun sequence.
ACCESSION   DAXHRP010000312 DAXHRP010000000
VERSION     DAXHRP010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.312"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..446)
                     /locus_tag="ACFM72_002176"
     CDS             complement(<1..446)
                     /locus_tag="ACFM72_002176"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC6258665.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGRHSRLAYAQAGGIVFEPFFI"
BASE COUNT           91 a          139 c          122 g          119 t
ORIGIN      
        1 ctgatgaaaa aaggctcaaa cacaatgccg ccggcttgcg cataagccag gcgcgaatgc
       61 cggcccgcat tgtcgggttt aaagccgtct tcgccgcgca gtttccagcc ggttttcttg
      121 gcaacggctt tgctcaacac ctgacaccag cgtttgtttt taacggtact caaggcttcg
      181 atgcctgtcg ccgctttgct gacggcagcg ttggtgtgaa actcaatcgc cacatccgag
      241 ccgcgaatca gcttgaccgc ttcgcgcagc ggcatattgc ctttgcccgt gccgtcggtt
      301 ttaacggtca ggccgtaatc gttacgcagg attgaagcca caatgttgcg catatcctgc
      361 gccaagtccg cctcacggtc gcttccgttg accgcacccg ggtcggtgtt gctgtgtcca
      421 gcggttaagg ttacggtttt gcccattcat catctccaaa aaatattgat t
//
LOCUS       DAXHRP010000313          471 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.313, whole genome shotgun sequence.
ACCESSION   DAXHRP010000313 DAXHRP010000000
VERSION     DAXHRP010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.313"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          137 a          114 c          107 g          113 t
ORIGIN      
        1 ttacatagtg ccagctaagg taaattatac cataaatttt aaataaatca agcggtaagt
       61 gattttccac ggccactcgg attaatccgg gtggcttcat tttaagggtt tgcaaggcag
      121 gcggggtcgt ccgttttggt ggaaataata tatcgattgc gcttcaaggc tctgcgcgta
      181 cctcattgcc gcccgtttaa acacggggtt tatctgacag gcgcgtaatc cgccctctca
      241 tttaccgaac aagcgaactg gattcccgcc tgcgcgggaa tgacgaagcg atccgcacgg
      301 aaacctgcac cacgtcattc ccacaaggac agaaaaccaa aatcagaaac ctaaaatccc
      361 gtcattccca cgaaagtggg aatctagacc ttagaacaac agcaatattc aaagattatc
      421 tgaaagtccg agattctgga ttcccacttt cgtgggaatg acggaatgta g
//
LOCUS       DAXHRP010000314          440 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.314, whole genome shotgun sequence.
ACCESSION   DAXHRP010000314 DAXHRP010000000
VERSION     DAXHRP010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.314"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(191..>440)
                     /locus_tag="ACFM72_002177"
     CDS             complement(191..>440)
                     /locus_tag="ACFM72_002177"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258666.1"
                     /translation="FARRGEKYSCYSPTYARFASILRPFMCNTLHLLNKIQTTLYIKC
                     KKYAVIPANAGIQTPRHGNLSSKTVSQILRSRFPRSRE"
BASE COUNT          132 a          109 c          112 g           87 t
ORIGIN      
        1 cgggaatcca gccccgtggg agcagaaact tacaccccgt cattcccgca aaagcgggaa
       61 tccagtaacc gaaaaaccac gggaatttat cggaaaaaca gaaacccccg accgtcattc
      121 ccgcgaacgc gggaatccag taaccgaaaa accacgggaa tctatcggaa aaaacagaaa
      181 ccctcgaccg tcattcccgc gaacgcggga atctagaacg tagaatctga gaaaccgttt
      241 tactcgataa atttccatgc cgaggggtct ggattcccgc gttcgcggga atgacggcat
      301 attttttgca tttgatataa agggtcgttt gaattttgtt cagcaagtgc aaagtgttgc
      361 acataaaagg gcgcaggata gaggcaaagc gggcgtaggt cgggctgtag caactgtatt
      421 tttcaccccg tcgggcaaaa
//
LOCUS       DAXHRP010000315          438 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.315, whole genome shotgun sequence.
ACCESSION   DAXHRP010000315 DAXHRP010000000
VERSION     DAXHRP010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.315"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>438
                     /locus_tag="ACFM72_002178"
     CDS             <1..>438
                     /locus_tag="ACFM72_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFC6258667.1"
                     /translation="LQSGWDTKLQGTQFETTLGGATIRAGVGEQARADAKIILEGIKS
                     SIHTETVSSSKSTLWQKQAGRGSNIETLQLPSFTGPVAPVLTAPGGYIADIPKGNLKT
                     EIEKLAKQPEYAYLKQLQVAKNINWNQVQLAYDRWDYKQEGLTE"
BASE COUNT          139 a          121 c          107 g           71 t
ORIGIN      
        1 ctgcaatcag gttgggatac caaactgcaa ggcacacagt ttgaaaccac actgggtggc
       61 gcaaccatac gcgcaggcgt aggcgagcag gcacgggcag atgccaagat tatcctcgaa
      121 gggatcaaaa gcagcatcca cacagaaacc gtgagcagca gcaaatctac tctatggcaa
      181 aaacaggcag gacggggcag taacatcgaa accttgcaat tgccgagttt caccggtccc
      241 gttgcgcccg tactgaccgc tcccggcggc tatatcgccg acatccccaa aggcaacctc
      301 aaaaccgaaa tcgaaaaact cgccaaacag cccgagtatg cttatttgaa acaacttcaa
      361 gttgcgaaaa acatcaactg gaatcaggtg cagcttgctt acgacagatg ggactacaaa
      421 caggagggct taaccgaa
//
LOCUS       DAXHRP010000316          428 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.316, whole genome shotgun sequence.
ACCESSION   DAXHRP010000316 DAXHRP010000000
VERSION     DAXHRP010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.316"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(224..>428)
                     /locus_tag="ACFM72_002179"
     CDS             complement(224..>428)
                     /locus_tag="ACFM72_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258668.1"
                     /translation="IGGQSTAAIADLAGEMRRLAKKSKMLLKGLWPFLSSTISAFKIN
                     QSLFKHYCKTVQLLNCKHRKKNY"
BASE COUNT          129 a           87 c           84 g          128 t
ORIGIN      
        1 gatattacgg ataccaaaac taaggtcgta tccgcccccc tactctccct aagcaaagag
       61 atgaaacagc gtatcggctc cctgccggtt gaattttccg aaaaaacgcg acgtaaccag
      121 catcaacata tataagaaca gcacaaatag catcaataca tcaggcaacg aaaatgcaga
      181 ataatgcact taatggtgtt tggatatctg ttgttttgtg ctgttagtaa ttcttctttc
      241 tgtgtttaca gtttagcagt tgtacagttt tacagtaatg tttaaacaat gactgattta
      301 ttttaaatgc agatattgta gaggataaaa atggccaaag tcctttcagt aacatttttg
      361 attttttagc gagccttctc atttccccgg cgagatcggc aatggcagcg gtactttggc
      421 cgccgata
//
LOCUS       DAXHRP010000317          402 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.317, whole genome shotgun sequence.
ACCESSION   DAXHRP010000317 DAXHRP010000000
VERSION     DAXHRP010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.317"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            108..323
                     /gene="rpmE"
                     /locus_tag="ACFM72_002180"
     CDS             108..323
                     /gene="rpmE"
                     /locus_tag="ACFM72_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HFC6258669.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFVTKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT          125 a          104 c           73 g          100 t
ORIGIN      
        1 attttatcga atatcctctt gacgaaacaa cagaaaatag cgagaatgcc gagcttgtct
       61 gaagcatagg tacatcccct atgcccgctt ttttgaaagg aaatcaaatg aaacaaggta
      121 ttcacccgaa ctaccacgaa gtcaacgtta cctgctcttg cggcaacaaa ttcgtaacca
      181 aatccgcgat ggaaaaagaa aacttcaata tcgaggtttg ctccctgtgc cacccattct
      241 ataccggcac ccaaaaaatc gtcgatacca ccggccgcgt ggacaaattt aacaacaaat
      301 tcggcaacct gttcaaacgc tgattgccgc tttgcaagaa ttaagccctg ccatcatttc
      361 gatggcaggg ctttttaata tttggcacac tgacttctta tc
//
LOCUS       DAXHRP010000318          402 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.318, whole genome shotgun sequence.
ACCESSION   DAXHRP010000318 DAXHRP010000000
VERSION     DAXHRP010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.318"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          104 a          113 c           87 g           98 t
ORIGIN      
        1 ctgcgcggga atgacgaatc catccatacg gaaacctgca ccgcgtcatt cccacgaaag
       61 tgggaatcca ggacgaaaaa tctccagaaa ccgttttatc cgataagttt ccgcactgac
      121 agacctagat tcccgcctgc gcgggaatga cgaatccatc catacggaaa cctacatccc
      181 gtcattccta cgaacctaca ttccgtcatt cccacgaaag tgggaatcca gaatcccaga
      241 ctttcagata atctttgaat attgctgttg ttctaaggtc tagattcccg cctgcgcggg
      301 aatgacggga tttgaggttt ctgttcgcgt cattcccacg aacctgcatc ccgtcattcc
      361 cacgaaagtg ggaatctagt tttgtcggtg cggaaactta tc
//
LOCUS       DAXHRP010000319          392 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.319, whole genome shotgun sequence.
ACCESSION   DAXHRP010000319 DAXHRP010000000
VERSION     DAXHRP010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.319"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>392
                     /locus_tag="ACFM72_002181"
     CDS             <1..>392
                     /locus_tag="ACFM72_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258670.1"
                     /translation="QKSRRFIGIKVGKSNYSKNELNETKLPVRVVAQTAATRSGWDTV
                     LEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQSEEKLETNSTVWQKQAGRG
                     STIETLKLPSFESPTPPKLSAPGGYIVD"
BASE COUNT          120 a          110 c           93 g           69 t
ORIGIN      
        1 caaaaaagcc gccgctttat cggcatcaag gtaggtaaga gcaattacag taaaaacgaa
       61 ctgaacgaaa ccaaattgcc tgtccgcgtc gtcgcccaaa ctgcagccac ccgttcaggc
      121 tgggataccg tgctcgaagg taccgaattc aaaaccacgc tggccggtgc cgacattcag
      181 gcaggtgtag gcgaaaaagc ccgtgtcgat gcgaaaatta tcctcaaagg cattgtgaac
      241 cgtatccagt cggaagaaaa attagaaacc aactcaaccg tatggcagaa acaggccgga
      301 cgcggcagca ctatcgaaac gctaaaactg cccagcttcg aaagccctac tccgcccaaa
      361 ttgtccgcac ccggcggtta cattgtcgat at
//
LOCUS       DAXHRP010000320          389 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.320, whole genome shotgun sequence.
ACCESSION   DAXHRP010000320 DAXHRP010000000
VERSION     DAXHRP010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.320"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           86 a          106 c           98 g           99 t
ORIGIN      
        1 ctgcttcctt cgaaagctcc gttttcagac gacctttcag ttttcagtgc acacaggctt
       61 tgtgaaagcg ttatcgactt tgatgtaagc ctacggctta ctgccctctc cctaaccctc
      121 tcccacaggg agaggggacg ggttgccgta gcctcgctgt ttgccgcata aactcgggtg
      181 cggactgcca tcggtctgaa tctttgattc agccgttcga tgcgtgtgcc tgtggtgttc
      241 caaaaggtcg tctgaaaacg gagctttcga aggaagcgga gtttctgcga agctaaaacg
      301 gagcttctga aatcgcagct tcaacaagag ttaaaaatcg cctgaagctt aaagacagcc
      361 tgcaccccaa tcccctctcc ctgtgggag
//
LOCUS       DAXHRP010000321          382 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.321, whole genome shotgun sequence.
ACCESSION   DAXHRP010000321 DAXHRP010000000
VERSION     DAXHRP010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.321"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            123..302
                     /locus_tag="ACFM72_002182"
     CDS             123..302
                     /locus_tag="ACFM72_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258671.1"
                     /translation="MFWYVIGFCAFVVALLSLWVNAGAFGMQEDDTPQSDYERRLGLG
                     AKLKNKNPDTDEKRQ"
BASE COUNT           98 a           71 c          102 g          111 t
ORIGIN      
        1 atttgtactg tcttcggctc gccgccttgt cctgatttaa atttaattca ctatatttgc
       61 ccgtgcgttt gtgataaatt cggcactgta tttgatatga ttttaacaaa tcgggagggg
      121 caatgttttg gtatgtgatt ggcttttgcg cctttgtcgt cgcgctgctg tcgctgtggg
      181 tcaatgccgg cgcgttcggt atgcaggaag acgatactcc gcaatcggat tatgaaaggc
      241 gtttgggctt gggtgcgaag ctgaaaaaca aaaatccgga tacggacgaa aaacggcaat
      301 aaagacaaca aatgccgtct gaaaggtttt cagacggcat ttgctttgga gcggatatag
      361 tggattaaca aaaatcagga ca
//
LOCUS       DAXHRP010000322          380 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.322, whole genome shotgun sequence.
ACCESSION   DAXHRP010000322 DAXHRP010000000
VERSION     DAXHRP010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.322"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..299)
                     /locus_tag="ACFM72_002183"
     CDS             complement(<1..299)
                     /locus_tag="ACFM72_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HFC6258672.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPAGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPSYAPVD"
BASE COUNT           99 a           95 c          115 g           71 t
ORIGIN      
        1 atgtcgacgg gtgcgtaaga aggaacgtat gtacccgaaa cggcaggtgc agacggcgga
       61 acataagcag gaggcgtata aaccggcgcg ctttgcaccg gcggcacata aggcgcatcg
      121 ccggcaggag ccgggctgta cggcgttgct ccataggggt tgttgtaaac tgccgaagac
      181 ggcgcgtcct gcatacctga attgcctgca atgacggggg caggctgctg ggtagcacaa
      241 ccgcccaaca gtgcggcaaa ggaggcgcaa gccgccaaaa gtgtcgtttg tttcaacata
      301 agataacctt catgttccga tatatagcct gaatgcggta tatcataata aaaatgcgcg
      361 ttcttctcaa gcgcaaagcc
//
LOCUS       DAXHRP010000323          377 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.323, whole genome shotgun sequence.
ACCESSION   DAXHRP010000323 DAXHRP010000000
VERSION     DAXHRP010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.323"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(181..>377)
                     /locus_tag="ACFM72_002184"
     CDS             complement(181..>377)
                     /locus_tag="ACFM72_002184"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258673.1"
                     /translation="PKLNGLDSRFRGNDGDRVAVIVDEQKPVRRCLALAQRERFSKVL
                     KHQVNRFRPICTVCGFVALS"
BASE COUNT          116 a           91 c           94 g           76 t
ORIGIN      
        1 gcaacctttc cgcgtccttc ccgcgaaagc gggaatctag gaactcaaag ctgcaagaat
       61 ttatcagaaa caactggaac ttaaaaaact agattcccgc ctgcgcggga atgacgaagg
      121 gttaaagaaa tgacgagaaa cggcggtaat ttatcgggaa taaccgaaaa cgaacggaaa
      181 tcaggacaag gcgacgaagc cgcagacagt acaaatagga cggaaccgat tcacttggtg
      241 cttgagcacc ttagagaatc gttctctttg agctaaggcg aggcaacgac gtactggttt
      301 ttgttcatcc actataacag caaccctgtc gccgtcattc ccgcgaaagc gggaatccag
      361 tccgttcagt ttcggtc
//
LOCUS       DAXHRP010000324          364 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.324, whole genome shotgun sequence.
ACCESSION   DAXHRP010000324 DAXHRP010000000
VERSION     DAXHRP010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.324"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           93 a           69 c          105 g           97 t
ORIGIN      
        1 tttaggtttc tgattttggt tttctgtttt tgtaggaatg atgaaatttt gagttttagg
       61 aatttatcgg aaaaaacaga aaccgctccg ccgtcattcc cgcgcaggcg ggaatctagg
      121 acgtaaaatc tcaagaaacc gttgtacccg ataagtttcc gtgccgacaa gtccggattc
      181 ccgcctgcgc gggaatgacg gttcagttgc atagggtcgg attgtcgaaa ggtaaggatt
      241 cgatgaaaac ggtggaaatg tgggattgat ggaatcggtg ggctgaagcc caccctacag
      301 agctttcaga cggtattgtt tgcgtttttc gggagggggg caaatgaaac gccgacaaac
      361 cgat
//
LOCUS       DAXHRP010000325          356 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.325, whole genome shotgun sequence.
ACCESSION   DAXHRP010000325 DAXHRP010000000
VERSION     DAXHRP010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.325"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           97 a           84 c           75 g          100 t
ORIGIN      
        1 aggaatgacg gtggaaaggt ttttgttgtt tcggagaagt ttctgcaacc ctagaatctc
       61 gttatttcca caaaaaacag aaacccgaaa cagcaactta aaacctcgtc attcccgcaa
      121 aagcgggaat ccagtccgtt cggtttcggt cgtttccgat aaattcccgt tgcttttcat
      181 ttctagattc ccactttcgt gggaatgacg gcggagaggt ttttgttgtt tcggagaagt
      241 ttctgcaacc ctagaatctc gttatttcca caaaaaacag aaaaccaaaa cagcaactta
      301 aaacctcgtc attcccgcaa aagcgggaat ccggtccgtt cggtttcggt cgtttc
//
LOCUS       DAXHRP010000326          348 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.326, whole genome shotgun sequence.
ACCESSION   DAXHRP010000326 DAXHRP010000000
VERSION     DAXHRP010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.326"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(135..>348)
                     /locus_tag="ACFM72_002185"
     CDS             complement(135..>348)
                     /locus_tag="ACFM72_002185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC6258674.1"
                     /translation="VKEYQPPVGIFLFVCFEKCLFPDFAIPIRFCAVRCVLARTCSKS
                     HVIPVFEALIRDADFQYIFSATTTKA"
BASE COUNT          114 a           84 c           60 g           90 t
ORIGIN      
        1 cagatattcg aatatcgaat ttgccttatg gttacggttt tctgttttat ctgccttaaa
       61 ccgccggtat tccgtttgaa ccaaatcata tttgccgaaa cgctcaaaaa tctcccttac
      121 ctgcccgaca gacatcaagc cttcgttgtt gtagctgaga aaatatattg aaagtccgca
      181 tccctaatca aagcctcaaa taccggaatc acatgcgatt ttgagcaagt ccgcgctaaa
      241 acacatcgta cagcgcaaaa ccggatggga atggcaaaat ccggaaacaa acatttttca
      301 aagcatacaa acaaaaaaat accaaccgga ggttggtatt ccttaact
//
LOCUS       DAXHRP010000327          348 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.327, whole genome shotgun sequence.
ACCESSION   DAXHRP010000327 DAXHRP010000000
VERSION     DAXHRP010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.327"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           65 a           70 c          111 g          102 t
ORIGIN      
        1 ctgtttttgg ttttctgtcc ttgcgggaat gatgaaattt taagttttag gaatttatcg
       61 aaaaaacaga aaccgctccg ccgtcattcc cgcgcaggcg ggaatccagc ctcgtcggtg
      121 cggaaactta tcgggaaaac ggtttcttga gattttgcgt tctggattcc cgctttcgtg
      181 ggaatgacgg tttaggtatt tttatagaaa gccgtaggtg gtgtttctat gcaaacgaca
      241 gatgaagcgt cgcggcaggt tgacggcagg tgcttggtgt tgatgttgtc ggcggtcttg
      301 gcggcggcgg cgacggtgtc gtctttggcg gcgttgcgcg taaccggc
//
LOCUS       DAXHRP010000328          347 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.328, whole genome shotgun sequence.
ACCESSION   DAXHRP010000328 DAXHRP010000000
VERSION     DAXHRP010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.328"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          121 a           86 c           63 g           77 t
ORIGIN      
        1 actcattagt tacctaaaac ttaaaaaaca gaaacctttc cgccgtcatt cccacgaaag
       61 tgggaatcta gaacccaaat gctaaggcga tttatcggaa acggctgaaa ccgaacgaat
      121 tggattcccg cctgcgcagg aatgacaact cattagttac ctaaaactta aaaaacagaa
      181 acctttacac cgtcattccc acgaaagtgg gaatctagaa cccaaatgct aaggcgattt
      241 atcggaaacg gctgaaaccg aatgaattgg attcccgcct gtgcgggaat gacgacttat
      301 tagttaccta acacttaaaa aacagaaacc tttccgcgtc attccca
//
LOCUS       DAXHRP010000329          343 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.329, whole genome shotgun sequence.
ACCESSION   DAXHRP010000329 DAXHRP010000000
VERSION     DAXHRP010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.329"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..>343)
                     /locus_tag="ACFM72_002186"
     CDS             complement(<1..>343)
                     /locus_tag="ACFM72_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC6258675.1"
                     /translation="ELKAINLYDCAFEDFVPEIKDNFCVGIDLDIGTDDSDAADIFSV
                     RICSPKWILHNCFQNQRVKWGAGMMIMNEFNHSVIKSEIEKILKECSKETWEKSLTYL
                     LRFFSWEFEDY"
BASE COUNT          123 a           69 c           41 g          110 t
ORIGIN      
        1 tgataatctt caaattccca cgaaaaaaaa cgaagtaaat aagtcaatga cttttcccaa
       61 gtttcttttg aacattcttt aagaattttc tcaatttccg atttaataac agaatgatta
      121 aattcattca taatcatcat acccgctccc catttaaccc tttgattttg gaaacaatta
      181 tgcaaaatcc atttaggaga gcatatgcga acagaaaata tatctgcagc atcactatca
      241 tcagttccta tgtctaaatc aattcccaca caaaaattgt ctttgatttc gggaacgaaa
      301 tcttcaaagg cacaatcgta aagattgatg gctttcaatt cta
//
LOCUS       DAXHRP010000330          338 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.330, whole genome shotgun sequence.
ACCESSION   DAXHRP010000330 DAXHRP010000000
VERSION     DAXHRP010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.330"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           99 a           66 c           84 g           89 t
ORIGIN      
        1 tgttaatcca ctatattatt tttgacacat tttcatgatt ttaaatcacg tcattcccaa
       61 gtaggcggaa accggcaatg agaagccgca gagacttacc aggaaaaacg gcaagccctc
      121 cgccgtcatt cccgcgcagg cgggaatcta gaaataaaaa accacggtgt tatcggcaat
      181 gactgaaacc ggagaaatga cgaaattgaa gcgtgcggaa atgtgtcgga aatcgctgaa
      241 gccggataaa ctagattccc gcttttgcgg gaatgacggg attttaggtt tttggtttgt
      301 tttcgcggca atgatgggat tttaaattgc aggtattt
//
LOCUS       DAXHRP010000331          335 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.331, whole genome shotgun sequence.
ACCESSION   DAXHRP010000331 DAXHRP010000000
VERSION     DAXHRP010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.331"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>335
                     /locus_tag="ACFM72_002187"
     CDS             <1..>335
                     /locus_tag="ACFM72_002187"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC6258676.1"
                     /translation="TVKKYIDEVLTAGHGKLYQSDGRHSVNPTEGYGTGGLLQGKKHM
                     LSLTWNAPIEAFTREGDFFEGKGVDVLYMHFHKANEFLGMTRLPTFLCNDVVKNPQVE
                     KYLADYQAH"
BASE COUNT          101 a           75 c           84 g           75 t
ORIGIN      
        1 ggacagtgaa aaaatacata gacgaagtat taaccgctgg acacggcaaa ctctaccaaa
       61 gcgacggcag acacagcgtc aatccgactg agggctacgg cacaggcggc ttgttgcaag
      121 gcaaaaaaca tatgctttca ctgacttgga atgcgccgat tgaggcgttt acccgcgaag
      181 gcgatttctt tgaaggcaaa ggcgttgatg ttttgtatat gcacttccac aaagccaacg
      241 agtttttggg tatgacccgc ctgccgacat tcttatgtaa cgatgtggtt aaaaatccgc
      301 aagtggaaaa atacttggca gattatcagg cacac
//
LOCUS       DAXHRP010000332          334 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.332, whole genome shotgun sequence.
ACCESSION   DAXHRP010000332 DAXHRP010000000
VERSION     DAXHRP010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.332"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           96 a           73 c           72 g           93 t
ORIGIN      
        1 tttttttgaa tttcgggcaa cgcttgaatc ttcattccgc gcaggcggaa attatcggtg
       61 cggtacggca acttttttcg atatgaaaag accgtcattc ctgtaaaaac aaaaaatcaa
      121 aaacagaaaa ttgaaattcg tcattcccgc gcaggcggga atccaggacg taaaatctat
      181 agtggattaa caaaaaccag tacagcgttg ccttgactta gctcgaagag aacgattctc
      241 taaggtgctg aagcaccgag tgagtcggtt ccgtactatc cgtactgtct gcggcttcgt
      301 cgccttgtcc tgatttttgt taatccacta taaa
//
LOCUS       DAXHRP010000333          330 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.333, whole genome shotgun sequence.
ACCESSION   DAXHRP010000333 DAXHRP010000000
VERSION     DAXHRP010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.333"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>330
                     /locus_tag="ACFM72_002188"
     CDS             <1..>330
                     /locus_tag="ACFM72_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC6258677.1"
                     /translation="MDTERQDPATKEALQYRTALFAGYESLTSRPLCTQTAIMVCNAI
                     KHPYEMAIRKTGGTALKGGNSGNVVYTPPEGEETIRGKLANWERFIHESGDLDPLIIM
                     AAAHYQFE"
BASE COUNT           98 a           98 c           80 g           54 t
ORIGIN      
        1 atggatacgg aacggcaaga ccctgccacg aaagaagccc tgcaataccg caccgccctg
       61 tttgcaggct atgaatcact gacgagccgc cctttatgca cacaaaccgc catcatggtc
      121 tgcaacgcca tcaagcaccc ctacgaaatg gccatccgca aaacaggcgg cacagcccta
      181 aaaggaggca acagcggaaa tgttgtctat accccgcccg aaggagaaga aaccatacgc
      241 ggcaagctgg caaattggga gcggtttatt cacgaaagcg gcgatttaga cccgcttatc
      301 atcatggcgg cggcacatta ccaatttgaa
//
LOCUS       DAXHRP010000334          317 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.334, whole genome shotgun sequence.
ACCESSION   DAXHRP010000334 DAXHRP010000000
VERSION     DAXHRP010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.334"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT          100 a           96 c           69 g           52 t
ORIGIN      
        1 caaaaattcc gatgccgtct gaaatttcgt cattcccgtg aaagcgggaa tccaaccccg
       61 tcggagcaga aacttacacc ccgtcattcc cgcgaacgcg ggaatccagt aaccgaaaaa
      121 ccacaggaat ctatcggaaa aaacagaacc ccccgccgcc gtcattcccg cgaacgcggg
      181 aatccagtaa ccgaaaaacc acgggaatct atcggaaaaa acagaaaccc ccgaccgtca
      241 ttcccgcgaa cgcgggaatc tagaacgtag aatctgagaa accgttttac tcgataaatt
      301 tccgtgccga ggggtct
//
LOCUS       DAXHRP010000335          314 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.335, whole genome shotgun sequence.
ACCESSION   DAXHRP010000335 DAXHRP010000000
VERSION     DAXHRP010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.335"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           87 a           79 c           73 g           75 t
ORIGIN      
        1 aaaaaatcaa tgtgttatct caaacccacg ttaggtctaa taaaatggtc ggacatccgt
       61 atccgacagc ccatcttctt ttcagacggc attgcaaatt taagtttgac gtgcgttcaa
      121 aataaggcag ttaatgcgaa gcgaaattcc gtcggcgtac ctgcaacttg actccctccc
      181 ctgtggggga gggttgggga gagggtaaaa cggggcagat acagacaata tttccgttac
      241 cgccccgatg ccctccccta accctctccc acgagagagg gaatggattg ccgttgaaat
      301 aaatcgctct acat
//
LOCUS       DAXHRP010000336          299 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.336, whole genome shotgun sequence.
ACCESSION   DAXHRP010000336 DAXHRP010000000
VERSION     DAXHRP010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.336"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>299
                     /locus_tag="ACFM72_002189"
     CDS             <1..>299
                     /locus_tag="ACFM72_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258678.1"
                     /translation="TRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINC
                     QLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDEEGQISSQTTPSKDSDARW"
BASE COUNT           90 a           82 c           66 g           61 t
ORIGIN      
        1 acccgcatcg atttcaacct gttttgccgt tttgacgaac taagcatccc cgattacagt
       61 actttatgcc gttaccgcaa ttggctggcg caagacgaca ccctgtccga actgctcaaa
      121 ctgattaact gccaactgac cgaaaaaggt ttaaaaatag agaaagcatc cgccgctgtt
      181 gttgatgcca ccattattca gaccgccggc agcaaacagc gccaggccat agaagttgac
      241 gaagaaggac aaatcagcag ccaaaccaca ccgagtaagg acagcgatgc tcgttggat
//
LOCUS       DAXHRP010000337          283 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.337, whole genome shotgun sequence.
ACCESSION   DAXHRP010000337 DAXHRP010000000
VERSION     DAXHRP010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.337"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(122..>283)
                     /locus_tag="ACFM72_002190"
     CDS             complement(122..>283)
                     /locus_tag="ACFM72_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
                     /protein_id="HFC6258679.1"
                     /translation="DIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAG
                     LKLALSRCR"
BASE COUNT           66 a           69 c           59 g           89 t
ORIGIN      
        1 cgtctgaaac ggtttttctg tttttagacg gcctcttggc ttagaccttg agaaccgcat
       61 gcgtgcttaa tttattatct aatgaaaaaa gtttccggct ttcagacgac cttttgtaat
      121 attatcggca gcggctcaat gccaacttta aacctgctcc gatttcttca gggctgttat
      181 ccaatgataa aattacatcg tctgcatcaa tggcatccca cgcttccagc ttgacatggc
      241 ggctcgggct gattttcagg cagccgttgt gcagccaaat atc
//
LOCUS       DAXHRP010000338          281 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.338, whole genome shotgun sequence.
ACCESSION   DAXHRP010000338 DAXHRP010000000
VERSION     DAXHRP010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.338"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            186..>281
                     /locus_tag="ACFM72_002191"
     CDS             186..>281
                     /locus_tag="ACFM72_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HFC6258680.1"
                     /translation="MTMQVFLTIPGYDVEAEIEKFVWMDAVIWQMP"
BASE COUNT           72 a           74 c           71 g           64 t
ORIGIN      
        1 gaattggatt cccgcctgcg cgggaatgac gaatccatcc gtacggaaac ctgcaccacg
       61 tcattcccac gaacctacat tccgtcattc ccacgaaagt gggaatccag gacgaaaaat
      121 ctccagaaac cgttttaccc gataagtttc cgcaccgaca ggtctggatt cccgcctgcg
      181 cgggaatgac gatgcaggta tttctgacga ttcccggcta tgatgttgag gcagaaatcg
      241 aaaaattcgt ttggatggat gctgtgattt ggcagatgcc g
//
LOCUS       DAXHRP010000339          278 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.339, whole genome shotgun sequence.
ACCESSION   DAXHRP010000339 DAXHRP010000000
VERSION     DAXHRP010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.339"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            complement(<1..152)
                     /locus_tag="ACFM72_002192"
     CDS             complement(<1..152)
                     /locus_tag="ACFM72_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC6258681.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEI"
BASE COUNT           77 a           61 c           62 g           78 t
ORIGIN      
        1 aaaatttcaa acggataccg ttcgcgcacc gccattaccg cctgccgcaa agccaaacgc
       61 accgcatcat cggtcaaaat cttctgccgt ttattggtta caaccgtaaa aaagtaagtg
      121 ccgccattgc ggtaaaaacg acggtatttc atagtattat gctcggaatg attttgtagg
      181 tcggattctt gaattcgaca ttttgggcat tgctgcaatg gattgcaatg atgggaatgt
      241 taaaggtttt gtcggataca agtatccgac ctacgctt
//
LOCUS       DAXHRP010000340          269 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.340, whole genome shotgun sequence.
ACCESSION   DAXHRP010000340 DAXHRP010000000
VERSION     DAXHRP010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.340"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           78 a           61 c           55 g           75 t
ORIGIN      
        1 gtttttgatt ttttgttttt ggggaatgac gggatttgag attgcgggca tttatcgggt
       61 aaaacggaaa ttatgcgtta cgaaaattta tccgaaatca cggcaacttt tccaccgtca
      121 ttcccacgaa agtgggaatc caggtctgtc ggcacggaaa cttatcgaga aaaacggttt
      181 gagacctttg caaaactccc caaaatcccc taaattccca ccaagacatt taggagattt
      241 ctcatgagca ccttcttcca acaaaccgc
//
LOCUS       DAXHRP010000341          265 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.341, whole genome shotgun sequence.
ACCESSION   DAXHRP010000341 DAXHRP010000000
VERSION     DAXHRP010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.341"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           64 a           71 c           67 g           63 t
ORIGIN      
        1 gaaaatgact gaaactcaaa aaactggatt cccactttcg tgggaatgac gtggtgcagg
       61 tttccgtacg gatggatgcg tcattcccgc gcaggcggga atctagacct gtcggtgcgg
      121 aaacttatcg gataacacgg tttccccaac cctgcatcct ggattcccac tttcgtggga
      181 atgacggcgg agcggtttct gctttttcca ataaatgacc ccaacctaaa atccgtcatt
      241 cccgcgcagg cgggaatcta gacct
//
LOCUS       DAXHRP010000342          249 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.342, whole genome shotgun sequence.
ACCESSION   DAXHRP010000342 DAXHRP010000000
VERSION     DAXHRP010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.342"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>249
                     /locus_tag="ACFM72_002193"
     CDS             <1..>249
                     /locus_tag="ACFM72_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HFC6258682.1"
                     /translation="SIPENPYIHELQYIKKGENPAIITHQNYHRYGENDYSTDIGSCI
                     NGFTVQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNN"
BASE COUNT           86 a           44 c           52 g           67 t
ORIGIN      
        1 tcgattcctg aaaacccata tattcatgaa ctacagtata ttaagaaagg agaaaatccg
       61 gcgattatta ctcatcagaa ctatcatagg tatggagaga acgattacag tactgatata
      121 ggttcctgta ttaacggttt cacggtacag tattacccgt ttattcggga aaagcagcag
      181 ctcacacagc aggagttggt aggttatcac caacaagtag agcaattggt acagagtttt
      241 gtaaacaat
//
LOCUS       DAXHRP010000343          249 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.343, whole genome shotgun sequence.
ACCESSION   DAXHRP010000343 DAXHRP010000000
VERSION     DAXHRP010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.343"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>249
                     /locus_tag="ACFM72_002194"
     CDS             <1..>249
                     /locus_tag="ACFM72_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011145223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HFC6258683.1"
                     /translation="WQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSRIG
                     DWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAED"
BASE COUNT           78 a           74 c           57 g           40 t
ORIGIN      
        1 tggcaacatc tcagaatatg cagcaaaccc taccgcaaac gctacggcag cacatggacc
       61 agaggcaaag tacccaaccg tgtcggcata gaaaaccgac ccgctatcgt cgaccagaaa
      121 tcccgtatcg gcgattggga agccgacacc attgtcggca aaggacagaa aagcgcatta
      181 ttgaccttgg tcgaacgcgt tacccgctac accatcatct gcaaattgga tagcctcaaa
      241 gccgaagac
//
LOCUS       DAXHRP010000344          245 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.344, whole genome shotgun sequence.
ACCESSION   DAXHRP010000344 DAXHRP010000000
VERSION     DAXHRP010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.344"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            <1..>245
                     /locus_tag="ACFM72_002195"
     CDS             <1..>245
                     /locus_tag="ACFM72_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HFC6258684.1"
                     /translation="NGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFS
                     CAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRA"
BASE COUNT           56 a           56 c           68 g           65 t
ORIGIN      
        1 aacggcttga aactttggga tattcatttt agaatgactc gttttatcgt cgcaagatgc
       61 ggtttattgt ttgcaaccct taaaggaaaa accatgaaga aaatgttcgt gctgttctgt
      121 atgctgttct cctgcgcctt ctcccttgcg gcggtaaaca tcaatgcggc ttcgcagcag
      181 gagttggagg cgctgccggg cataggcccg gcgaaggcga aggccattgc ggaataccgt
      241 gcgca
//
LOCUS       DAXHRP010000345          224 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.345, whole genome shotgun sequence.
ACCESSION   DAXHRP010000345 DAXHRP010000000
VERSION     DAXHRP010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.345"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           61 a           59 c           49 g           55 t
ORIGIN      
        1 gattcccact ttcgtgggaa tgacggcaga gcggcttctg ttgctcccga taaataccgc
       61 aatctcaaat cccgtcattc ccgcgcaggc gggaatctag acattcaatg ctaaggtaat
      121 ttctcggaaa tgactgaaac tcaaaaaaac tagattccca ctttcgtggg aatgacggca
      181 gagtggcttc tgttgctccc gataaatgcc gcaatctcaa atcc
//
LOCUS       DAXHRP010000346          219 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.346, whole genome shotgun sequence.
ACCESSION   DAXHRP010000346 DAXHRP010000000
VERSION     DAXHRP010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.346"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
BASE COUNT           68 a           55 c           33 g           63 t
ORIGIN      
        1 attttatttt aggaatatct cttatccatg ctaaaataca gcccaatgtc gaaaagaaaa
       61 taacagcaaa cactacctta cctcctctca cttccaacca aaccgatagc aggtttggtt
      121 ggaagttggt ttatttatta tttaacggcg aatgtcagtg ttcttacccg tagaacctgc
      181 ataaccagtt atgccaccag caacagtccc cactgctac
//
LOCUS       DAXHRP010000347          214 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M02 240167
            SAMEA1706810-rid23334983.denovo.347, whole genome shotgun sequence.
ACCESSION   DAXHRP010000347 DAXHRP010000000
VERSION     DAXHRP010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1706810
            Sequence Read Archive: ERR484111
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378099.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378099.1
            Genome Coverage       :: 195x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/28/2024 13:25:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,196
            CDSs (total)                      :: 2,140
            Genes (coding)                    :: 2,031
            CDSs (with protein)               :: 2,031
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 64 of 109
            Pseudo Genes (internal stop)      :: 16 of 109
            Pseudo Genes (multiple problems)  :: 16 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1706810-rid23334983.denovo.347"
                     /strain="M02 240167"
                     /db_xref="taxon:487"
     gene            10..>214
                     /locus_tag="ACFM72_002196"
     CDS             10..>214
                     /locus_tag="ACFM72_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HFC6258685.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLW"
BASE COUNT           57 a           30 c           60 g           67 t
ORIGIN      
        1 gatcttatta tgaatgaggg tgaagttgtt ttaacaccag aacaaatcca aaccttgcgt
       61 ggttatgctt tccgtggcga tacctatggc ggttggcgtt atttggctaa tttgggtgac
      121 cgttatgcgg atgatgctgc tgcaattgtc ggtaaggatg caaacttaaa tggtttgaat
      181 ttatggatga aaaaaggtgt ggaaaaccta tggg
//
